LOCUS       DASCMR010000001         4483 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000004833, whole genome shotgun sequence.
ACCESSION   DASCMR010000001 DASCMR010000000
VERSION     DASCMR010000001.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4483)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4483)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4483
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000004833"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..893
                     /locus_tag="QGG16_00005"
     CDS             <1..893
                     /locus_tag="QGG16_00005"
                     /inference="COORDINATES: protein motif:HMM:NF012398.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HJP23689.1"
                     /translation="MHIARAFHDAGLPPGVLNLVFGVPADISEHLIASDVIRLVAFTG
                     STVVGRHLTGMASDHMTSVLMELGGHAPVIVCEDTDVEAAATTSAIRAMRNAGQVCTS
                     PTRFFVHEAVYEQFLDVITRRCERTVVGSGLESGVEMGPVANDRRLASVGDLVADACA
                     AGGTLTTGGHRIGDTGYFYEPTVLADVPDHARIMQEEPFGPVAIVNPVDSLDTAIERA
                     NSVPFGLAAYGFTNRADHVDRMVDRVEAGNLSINMLEASLPETPFGGVKSSGYGREGG
                     TEGLHHYMVVKNVSHSIPII"
     gene            914..1867
                     /locus_tag="QGG16_00010"
     CDS             914..1867
                     /locus_tag="QGG16_00010"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012904.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HJP23690.1"
                     /translation="MDYGRSDAKAYAREHMKGIWAAALMPFTGDLRIDEDGFRENVRH
                     WTEDLGIEGLFVAGKQGEFFSMSVDERKRSFELAVEATRGRGHTIMSCSDQNMDVVID
                     LARHAADVGADYIVVHAPALHFHSARDETLLGYYRAIAEQVDIGIALWSHPDSGYLMS
                     PELCNRLADIETVVAIKYSVPRPLYSELTALASDRIQVSTASEDEWLDNILELDWRLY
                     LCSSPPFLLQTATDRRMHDYTRAAFEGRADDARSISASLDPVRAALKGTRPAEKPHAH
                     QKYWQELLGQVGGRVRGPLLELTEDEKRITREAFEQCGLGS"
     gene            1879..2685
                     /locus_tag="QGG16_00015"
     CDS             1879..2685
                     /locus_tag="QGG16_00015"
                     /EC_number="1.4.1.21"
                     /inference="COORDINATES: protein motif:HMM:NF009828.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate dehydrogenase"
                     /protein_id="HJP23691.1"
                     /translation="MAVAESHRVVFVGWGSIARATVQFLGEDPIEVVAVAGRSGTPVP
                     PDLPASAQLITDPDELIGFRPDVVVETAGRDAVGLWGRAALELGADLIVSSTSALADE
                     VLRVELEELAIGHGARVVVHPGALGGVDALAAAAAMGIGDVEHRIVKPPGAWLGTPAE
                     EEFDLGALDEPVTIFRGTAAGAASRYPRNANVAMTTALAGIGPDQTKVMLVADPAATT
                     NRHEISVSGAFGQLTVMIDNRPLPDNPKTSAMAALNLARCIRNRVEPFVI"
     gene            complement(2724..3926)
                     /locus_tag="QGG16_00020"
     CDS             complement(2724..3926)
                     /locus_tag="QGG16_00020"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012231547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HJP23692.1"
                     /translation="MAEAVIVATSRTAIGRAGKGGLVEARPDDLSAFIIDDVLSKVPA
                     LPRDQIEDVMWGTAQPGGEQGYNLGRVASLLAGLDAPGTTVNRYCSSSLQTIRMAAHA
                     IRAGEGDAFVSGGVECVSRFQFGAADTGSHNARFADAEARTAGRTGEGTGAWADPDGL
                     PDIYIAMGQTAENVAEHKGVSRQAQDEWGVRSQNRAEAAQVRGFFEREITPYTLPDGS
                     VFSSDDGIRAGTTYEKVSQLSPVFRPDGTVTAGNACPLNDGAAAVVVMSDTRAAELGI
                     KPLARIISSGVSALSPEIMGLGPIEAIRQALGRAGMTAADIDLFEINEAFAAQVLPSA
                     DEVGIDLDKLNVNGGAIALGHPFGMTGARIMTTLLNGLEDSDKEFGVESMCVGGGQGM
                     AMVVQRLS"
     gene            complement(4063..>4483)
                     /locus_tag="QGG16_00025"
     CDS             complement(4063..>4483)
                     /locus_tag="QGG16_00025"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013742.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HJP23693.1"
                     /translation="IARALPPGARLLCCDVSDEWTAIARTHWAMAGIDDRIDLVIAPA
                     LQTLKGLGDAVVDFAFIDADKTGYLAYYEELVPRLSPHGLLAIDNVLWAGKVLDPAAD
                     DDDTVALRALNDRIVADDRVKVVMLSVGDGLTLVRRA"
BASE COUNT          741 a         1470 c         1547 g          725 t
ORIGIN      
        1 ccatgcacat cgcccgggcc ttccatgacg cggggctccc accgggcgtg ctgaacctgg
       61 tgttcggcgt gccggcggac atctccgagc acctgatcgc cagcgacgtg atccgattgg
      121 tggccttcac cgggtcaacg gtcgtggggc gtcacctcac cggcatggcg tcggaccaca
      181 tgacatcggt cctgatggaa ctcggcggac atgcgccggt cattgtctgc gaggacaccg
      241 acgtcgaagc tgccgcgacc acctcggcca tccgggccat gcgaaacgcc ggccaggtat
      301 gtacgtcacc cacccgcttc ttcgtccacg aggccgtcta cgagcagttc ctcgacgtga
      361 tcacccgccg gtgcgagagg accgtggtgg gttcgggcct ggagtccggt gtcgagatgg
      421 gtccggtggc caatgatcga cgcctagcct cggtgggcga cctggttgcc gacgcgtgtg
      481 ccgccggagg caccttgacc accggcggcc accggatcgg cgacaccggc tacttctacg
      541 agccgacggt gctggccgac gtgcccgacc atgcccggat catgcaggag gaacccttcg
      601 gaccggtggc catcgtgaat ccggtcgact cgctggacac ggccatcgag cgggccaact
      661 cggtgccctt cggactggct gcctacggct tcaccaaccg ggcagaccat gtggaccgca
      721 tggtcgaccg tgtggaggcc ggcaacctct cgatcaacat gctcgaggcg tcgcttcccg
      781 agacaccgtt cggcggcgtg aagtcaagtg ggtacggccg tgaaggcggc accgagggcc
      841 tccaccacta catggtggtc aagaacgtct ctcacagcat ccccatcatc tgaggcggac
      901 tggagcacac gacatggact acggcagaag cgacgctaag gcgtacgccc gtgagcacat
      961 gaagggcatc tgggctgcgg ccctcatgcc gtttaccggg gacctccgca tcgacgagga
     1021 cggcttccgc gagaacgtcc ggcactggac cgaagacctc ggcatcgaag gcctcttcgt
     1081 ggccggcaag cagggcgagt tcttctcgat gtcggtcgat gaacgcaagc ggtcattcga
     1141 actggccgtc gaagcgaccc ggggacgggg ccacacgatc atgtcgtgct cggaccagaa
     1201 catggacgtg gtcatcgacc tagcccgcca cgcagccgac gtgggggccg actacatcgt
     1261 cgtacatgcg ccggcgctgc acttccactc ggcccgtgac gagacgctgc tgggctacta
     1321 ccgggcaatc gccgaacagg ttgacatcgg catcgccctg tggagccacc ccgatagcgg
     1381 ctacctgatg tcgccggaac tgtgcaaccg tctggccgac atcgagaccg tggtggccat
     1441 caagtacagc gtgccccggc cgctgtactc ggagctcacg gccctagctt cggaccgcat
     1501 ccaggtaagc actgcgtcgg aagacgaatg gctcgacaac atcctggaac tggactggcg
     1561 gctctacctg tgctcgtcgc cccccttcct gctccagacg gcgacggacc gacggatgca
     1621 cgactacacc cgggcggcct tcgaggggcg agccgacgac gcacgatcga tcagcgccag
     1681 cctcgatccg gtgcgggccg cccttaaggg cacccggccg gcagagaagc cccatgccca
     1741 ccagaaatac tggcaggagt tgctcggtca ggtcggcggc cgggtccggg ggccgctgct
     1801 agagctgacc gaggacgaga agcggatcac ccgcgaggcg ttcgagcagt gcggcctggg
     1861 gtcctaaccg ggtcgacgat ggctgtcgcg gaatcccatc gggtcgtctt cgtgggatgg
     1921 gggtcgatcg cccgggccac cgtccagttc ctaggtgagg acccgatcga ggtggtggcg
     1981 gtcgccggga ggtccgggac gccggtccct cccgacctgc ccgccagcgc ccagttgatc
     2041 accgaccccg atgagttgat cggattccgg ccggacgtcg tggtcgagac tgctggacga
     2101 gacgccgtag ggctgtgggg gagggccgcg ttggagttgg gcgccgatct gatcgtgtcg
     2161 tccacctctg ctctcgcgga cgaggtcttg cgggtcgaac ttgaggagct cgctatcggg
     2221 cacggagccc gggtcgtagt ccacccggga gcgttgggtg gggtcgatgc cctggctgcg
     2281 gcggcggcga tgggcatcgg agacgtcgag catcggatcg tgaagccgcc gggggcgtgg
     2341 ctcgggactc ctgccgagga agagttcgat ctcggggccc ttgacgagcc agtgaccatc
     2401 tttcgtggca cggctgccgg ggcggcgtcc cggtatccac gaaacgccaa cgtggcgatg
     2461 accaccgctc tggccgggat cggccctgat cagacaaagg tcatgcttgt cgcggatccc
     2521 gcagcgacca cgaatcgaca cgagatctcg gtcagcggtg cctttggtca gctcaccgtc
     2581 atgattgaca accggccgct cccggacaac ccgaagacgt ccgccatggc ggctttgaat
     2641 ctggctcgtt gcatccgcaa ccgggtcgag cccttcgtga tctgacagcg ggccgcccgc
     2701 ttccggtccg gcccagccgt ggctcagctc aggcgctgca cgaccatggc catgccctgg
     2761 ccgccgccca cgcacatgga ctcgacgccg aactccttgt cggagtcctc gaggccgttg
     2821 agcagcgtgg tcatgatgcg ggcaccggtc atgccgaacg gatggcccag ggcaatggcc
     2881 ccaccgttca cgttcagctt gtccaggtcg atgccgacct cgtcggccga cggcaggacc
     2941 tgagccgcga aggcctcgtt gatctcgaac aggtcgatgt cggcggcggt catgccggcc
     3001 cggccgaggg cttgacggat ggcctcgatg gggccgaggc ccatgatctc agggctgaga
     3061 gccgacacgc cggacgaaat gatgcgggcc aagggcttga tgcccaactc ggcagcccgg
     3121 gtgtcgctca tgacgaccac cgcagcggcg ccgtcgttga gcggacaggc gttgccagcc
     3181 gtgacggtac cgtcgggacg gaacaccggc gagagttggg acaccttctc gtaggtggtg
     3241 ccggcacgga tgccgtcgtc ggagctgaac accgagccat cgggcagggt gtagggcgtg
     3301 atttcccgtt cgaagaagcc acggacctga gcggcctcgg cgcggttctg ggaacggaca
     3361 ccccactcgt cctgggcctg acgggatacg cccttgtgct cggccacgtt ctcagccgtc
     3421 tggcccatgg cgatgtagat gtcgggcaaa ccgtcgggat cggcccaggc gcccgtgccc
     3481 tcaccagttc gacccgcggt gcgggcttcg gcgtcggcga agcgggcgtt gtgggagccg
     3541 gtgtccgcag caccgaactg gaatcggctg acgcactcca cgccaccgga gacgaaggcg
     3601 tcaccctcgc cggcccggat ggcatgcgca gccatgcgga tcgtctggag cgacgatgag
     3661 cagtaacggt tcacggtggt gcccggcgcg tcaaggccgg ccagcaggct ggccacccga
     3721 cccaggttgt agccctgctc gccgcccggc tgggcggtac cccacatgac gtcctcaatc
     3781 tggtcacgag gcagtgcggg caccttggag agcacgtcgt cgatgatgaa ggcggacagg
     3841 tcgtcgggac gggcctcgac gaggccgccc tttccggccc gcccgatggc ggtgcgactg
     3901 gtggcgacga tgacggcttc agccatggga ctgggctcct gcttgatggg gatcgggtcc
     3961 ggtgggttac cggccggcga ttcgattcta cccgtggccc tgggtgccgg ccccagccgg
     4021 gctgggctgt tgagatgggg tccggattgc gtgccttcgg gctcaggccc gccggaccag
     4081 cgtcagcccg tcgccgacgg acagcatgac caccttgacc cggtcgtcgg cgacgatccg
     4141 gtcgttgagc gcccgaagcg ccacggtgtc gtcgtcgtcg gccgccgggt cgagcacctt
     4201 gccggcccac aggacgttgt cgatggccaa caggccgtga ggtgagaggc gggggacgag
     4261 ttcctcgtag taggcgaggt aaccggtctt gtcggcatcg atgaaggcga agtccaccac
     4321 cgcgtcgccc agccccttca gcgtctgaag cgccggggcg atgaccaggt cgatccggtc
     4381 gtcgataccg gccatcgccc agtgggtccg ggcgatggcc gtccactcgt cggacacgtc
     4441 acaacacaaa aggcgagcgc cgggaggcaa cgctcgggcg atg
//
LOCUS       DASCMR010000002         3079 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000006658, whole genome shotgun sequence.
ACCESSION   DASCMR010000002 DASCMR010000000
VERSION     DASCMR010000002.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3079)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3079)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3079
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000006658"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..935
                     /gene="tsaD"
                     /locus_tag="QGG16_00030"
     CDS             <1..935
                     /gene="tsaD"
                     /locus_tag="QGG16_00030"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HJP23694.1"
                     /translation="AVFGGVVPEIAGRAHVRELVPVLAEALATAGIEVPGGSAGGIDA
                     VAATTGPGLVGSLLTGVSAAKALSLVWGVPFVAVNHLEAHLYASFLEEPDLELPLVVL
                     LVSGGHTMLVLMEDHGRYRLLGSTLDDAAGEAYDKVARYLGLGYPGGPAIDALAMDGD
                     PTAYAYPRSMVQENPATLSDDRRYAFSFSGLKTAVVNHVRNEPDAATADVAASFQEAV
                     VDALVTKARWAVEATGAKGACLGGGVAANSRLRERFLDMCTDTGVRAFLPSRALCTDN
                     AAMVAAAGWWRLRSDGPSPLDVGADPNLSLPLLD"
     gene            1132..1422
                     /gene="groES"
                     /locus_tag="QGG16_00035"
     CDS             1132..1422
                     /gene="groES"
                     /locus_tag="QGG16_00035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015797912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HJP23695.1"
                     /translation="MNLQPLEDRIVVRPSDFESTTASGLVIPDTAKEKPQQGDVLAVG
                     PGRRSEQTGELVPMDVAEGDTVVYSKYGGTEITVGGEDLLILNARDVLGILK"
     gene            1430..>3079
                     /gene="groL"
                     /locus_tag="QGG16_00040"
     CDS             1430..>3079
                     /gene="groL"
                     /locus_tag="QGG16_00040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004585059.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HJP23696.1"
                     /translation="MAKILKFDEEARRGLEAGVNKLADAVKVTLGPKGRNVVLDKKFG
                     APTITNDGVSIAREVELEDSFENMGAQLVKEVATKTNDIAGDGTTTATVLAQALVREG
                     LRNVAAGANPMGLKKGIEAAVAAAVGSIADQAVRVDDSKEQIANVAAISAADMTIGQV
                     IADAIDKVGKDGVVTVEESNTFGMDLDFVEGMQFDKGYLSPYFVTDPERQEAILEEPY
                     ILFNQGKISSVQDMLPVLEKVMQSGRPLLIISEDVEGEALATLVVNKIRGTFNSVAVK
                     APGFGERRKAMLQDMAILTGGQVIAEEVGLKLDGVSLDMMGSARKVVITKDETTIVDG
                     AGDAGDVEGRIGQIKREVEETDSDWDREKLQERLAKLAGGVAVVQVGAATEVELKEKK
                     HRIEDALSATRAAIEEGVVAGGGTALLRARASVSTAMEGLEGDEATGARIVHASLDAP
                     ARLIADNAGLEGAVMVREVEQASGPTGLNAATGELVDLVEAGVIDPAKVTRAALQNAG
                     SIAALLLTTEALVADKPEPEAAMPPGGGMDPMGGMGGMGGMM"
BASE COUNT          527 a         1007 c         1054 g          491 t
ORIGIN      
        1 acgcggtgtt cggtggggtg gtcccggaga tcgccgggcg ggctcatgtg cgcgagttgg
       61 tgcccgtcct ggccgaggcg ctagccaccg ccgggatcga ggttccggga ggaagcgccg
      121 gcggcatcga cgcagtggcc gccaccaccg gccctggcct cgttggatca ctccttaccg
      181 gggtgagcgc cgccaaggcc ctgtcgctgg tgtggggcgt gccgttcgtg gccgtcaacc
      241 acctcgaggc ccacctgtat gcgtcgtttc tcgaggagcc cgatctggaa ttgcccctgg
      301 tcgtcctgct ggtgtccggc ggccacacga tgctggtcct catggaggac catggtcgct
      361 accgcctact gggttccacg ttggacgacg cagccggaga ggcctacgac aaggtggccc
      421 gctatctggg gctcggatat ccgggcggcc cagcgatcga tgccctggcc atggatggtg
      481 acccaacggc gtacgcctac ccccgctcca tggtccaaga gaatccagcc accctgtccg
      541 acgaccgccg gtatgccttc tcgttcagcg gtctgaagac cgctgtggtg aaccacgttc
      601 gaaacgaacc cgacgcggca accgccgacg tggccgcctc atttcaggag gccgtggtcg
      661 acgcgctggt caccaaggcc cgctgggccg tggaggccac cggggccaag ggggcgtgcc
      721 tcgggggagg ggtggccgcc aactcccgac tacgggagcg tttcctggac atgtgcaccg
      781 ataccggggt gcgggccttc cttccgtcgc gggccctgtg caccgacaac gcggccatgg
      841 tggcggccgc cggctggtgg cgtctacgtt cggacggccc cagcccgctg gacgtggggg
      901 ccgatccgaa cctcagcctg ccgctgctgg actgagtcac gggccccgtc gctggtcgga
      961 tagtgggaaa accgccggct gccacgttgg ccgcgggcca gtgcagccct atcgttggca
     1021 ctcgcacagg gagactgcca atcggcgggt ccgaccgtgc gagacattca gaaccccatc
     1081 cagacgccag cggccacatg gtccggcgtc gtctcgaaag ggaatcattc gatgaacctc
     1141 cagcccctcg aggaccgcat cgtggtccgt ccgagcgact tcgagtcgac cacggcctcc
     1201 ggcctggtca ttccggacac cgccaaggag aagccccagc agggcgacgt cctggccgtc
     1261 ggccccggcc gtcgttcgga gcagaccggt gagcttgtgc cgatggacgt cgccgagggc
     1321 gacaccgtcg tctacagcaa atacggcggc accgagatca ccgtcggcgg tgaggatctt
     1381 ctgatcctca acgcccgcga tgtcctcggc atcctcaagt agtcgctccg tggcaaaaat
     1441 cctgaagttc gacgaagagg cccgtcgcgg cctcgaggcc ggcgtaaaca agctggccga
     1501 cgccgtgaag gtcaccctcg gccccaaggg ccgcaacgtg gtcctcgaca agaagttcgg
     1561 tgcccccacc atcaccaacg acggcgtttc tatcgcccgt gaggtggagc tggaggacag
     1621 cttcgagaac atgggtgctc agcttgtgaa ggaggtggcc accaagacca acgacatcgc
     1681 tggagacggc accaccactg ccaccgtgct ggcccaggcg ctagtccgcg agggccttcg
     1741 caacgtagcc gccggcgcca atccgatggg cctcaagaag ggcatcgagg ccgccgtggc
     1801 cgccgctgtc ggctccattg ccgaccaggc ggtgcgggtc gatgactcca aggagcagat
     1861 cgccaacgtg gccgccatct cggctgccga catgacgatt ggccaggtca tcgccgacgc
     1921 catcgacaag gtgggcaagg acggcgtcgt gaccgtggag gagtccaaca cgttcggcat
     1981 ggatctcgac ttcgtcgagg gcatgcagtt cgacaagggc tacctgtcgc cgtactttgt
     2041 gaccgacccg gagcgccagg aggcgatcct tgaagagccg tacatcctct tcaaccaggg
     2101 caagatcagc tcggtgcagg acatgctccc ggtgctcgag aaagtcatgc agtcgggtcg
     2161 cccgctgctg atcatctccg aggacgtcga gggtgaggcc ctggccacgc tggtcgtcaa
     2221 caagatccgt ggcaccttca actcggtggc cgttaaggcc ccgggtttcg gcgaacgccg
     2281 caaggcaatg ctccaggaca tggccatcct caccggtggt caggtcattg ccgaggaggt
     2341 cggactcaag ctcgacggtg tgagcctcga catgatgggc tcggcccgaa aggtcgtgat
     2401 caccaaggac gagacgacca tcgtcgacgg agccggcgat gccggcgacg tcgaaggccg
     2461 catcggccag atcaagcgtg aggtcgaaga gaccgattcc gattgggacc gcgagaagct
     2521 ccaggagcga ctggccaagc tggccggcgg cgtcgccgtc gtccaggtcg gtgcagccac
     2581 cgaggtggag ctcaaggaga agaagcaccg catcgaggac gccctgtcgg cgacccgtgc
     2641 ggccatcgag gagggtgtgg tcgccggtgg cggtaccgct ctgctgcggg cgcgtgcttc
     2701 ggtttccacg gccatggagg gcctcgaggg tgatgaagcg accggtgccc gcatcgtgca
     2761 cgcttccctc gacgctccgg ctcggctcat tgccgacaac gccggcctcg agggtgcggt
     2821 catggttcgt gaggtcgagc aggcctccgg tccgaccggc cttaacgcag cgaccggcga
     2881 gttggtcgac ctggtggaag ccggcgtcat cgacccggcc aaggtcaccc gtgcggcgtt
     2941 gcagaacgcg gggtctatcg cagccctgct gctgaccacc gaggcgctcg tggccgacaa
     3001 gcccgagccc gaggcggcaa tgcctcctgg tggaggcatg gatcccatgg gcggcatggg
     3061 cggcatgggc ggcatgatg
//
LOCUS       DASCMR010000003         1927 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000019427, whole genome shotgun sequence.
ACCESSION   DASCMR010000003 DASCMR010000000
VERSION     DASCMR010000003.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1927)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1927)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1927
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000019427"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            161..1450
                     /locus_tag="QGG16_00045"
     CDS             161..1450
                     /locus_tag="QGG16_00045"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HJP23697.1"
                     /translation="MSRIFLMLGPGVRLNMGLLYGGSGAARLRLVTDETSSQPPPGAL
                     GHLRVADFSRVLAGPMATMVLADLGADVVKVEQPGVGDETRTWGPPWWGDGDEATSTY
                     YLGLNRNKRSIALDLRDLDDLAVARRLALAADVVVDNFRVGTMARFGLDRETLAAEHP
                     GVITCSVTGFGSTGDGATLAGYDFLVQAMSGVMAITGEADGEPTKIGSAMVDNLTGLY
                     AAIAILAAVEQRRECGEGQHVEVSLMSAALAGLLNVGSGHVVADTDPGRQGNRHPSIV
                     PYQPYRTADGVLAIAAASPALWEKLCEALGRDDWRTDERFADNAARMVNADDLEAEIE
                     SVLATNTAAGWLVVLRAAGIPAGPINTVRQAFLDAEALGLDPIAVLDDGGSTGGRTEA
                     FRSVRSPIRMSTTPPTVRRRPPSNDEHGAEIRAETAN"
     gene            complement(1475..>1927)
                     /locus_tag="QGG16_00050"
     CDS             complement(1475..>1927)
                     /locus_tag="QGG16_00050"
                     /inference="COORDINATES: protein motif:HMM:NF026214.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl sulfatase C-terminal domain-containing
                     protein"
                     /protein_id="HJP23698.1"
                     /translation="RDIYLTGAQELRNGSIAIESINRPRPEMIMGMDLQQAFDLLAAS
                     LDGVAAAAIGPLTVDWYLNDTGELNNTVRLELSNGTLHSLPGATHASADVVVHGNRSQ
                     LNRLFATDATGVSLLDEGAITAEGKTDRLRALFACVTDFPRFYNIIEP"
BASE COUNT          301 a          621 c          678 g          327 t
ORIGIN      
        1 aaccaggtct gcacccgggt acggcgcttg gcggctcgtg catcgcgacc ccgacggacc
       61 tgccccagtt cgggaccggt tgccgatccg gtggacggct cgttgatcgg agtcatggtc
      121 actgcgggat gctctccacg atcaagcccc aatgcaagag atgagccgca tttttctgat
      181 gctcggtccc ggcgtccgtt tgaacatggg cctgttgtac ggcgggagtg gcgctgcgag
      241 actccggctc gtgaccgatg agaccagctc gcagccgccc cctggagcgc tcgggcacct
      301 tcgggtggct gacttcagcc gagtgctggc cgggcccatg gccaccatgg ttctggctga
      361 cctaggtgcc gatgtggtca aggtcgaaca acccggggtg ggcgacgaga ctcgcacctg
      421 gggcccaccg tggtggggtg atggcgacga ggcgaccagc acctactacc tgggcctgaa
      481 ccgcaacaag cgaagcatcg ctctcgacct gcgagacctt gatgacctgg cggtggcccg
      541 ccggctcgct ctggccgccg acgtggtggt cgacaacttc cgggtcggca ccatggcccg
      601 gttcggtctg gaccgggaga ccctggccgc tgagcatccg ggcgtcatca cctgttcggt
      661 caccgggttc ggcagtaccg gtgatggcgc cacgctggct ggctacgact ttttggtgca
      721 ggcgatgagc ggggtgatgg ccatcaccgg cgaggccgac ggcgaaccga ccaagatcgg
      781 gtcggccatg gtcgacaacc tgaccggcct ctacgcagcc atcgccatcc tggcggctgt
      841 cgagcagcgc cgggagtgtg gcgaaggcca gcacgtggag gtctcgctca tgtcggctgc
      901 cctggccggg ctgctcaacg tgggttcggg gcacgtggtg gccgacaccg acccggggcg
      961 tcagggcaac cgccacccgt cgatcgtccc ttaccagccg taccgcaccg ccgacggggt
     1021 gctggccatc gcggcggcca gccccgccct gtgggagaag ctctgtgagg cccttggccg
     1081 cgacgactgg cggaccgacg agcggttcgc tgataacgcg gcacgcatgg tcaatgccga
     1141 cgacctggaa gccgagatcg agtcggtgtt ggccaccaac acggccgccg gttggctggt
     1201 ggttctgcgg gccgcgggca ttccggctgg tcccatcaac acggtgcgtc aggcgttcct
     1261 ggatgccgag gccctcggtc tagatccgat cgccgtcctg gacgacggtg ggtcgaccgg
     1321 tggacgaact gaggcgttcc ggtcggttcg ctcaccgatc cggatgtcga ccaccccacc
     1381 gacggttcgc cggcgcccgc cgtccaacga cgagcacggc gccgaaatcc gtgccgagac
     1441 cgccaactga tcggcccagt agatcgggtc aggcctaggg ttcgatgatg ttgtagaagc
     1501 gggggaagtc cgtcacgcag gcgaacaggg cccgcagccg atcggtcttg ccctcggcag
     1561 tgatggcgcc ctcgtcgagc aggctgacac ccgtggcatc cgtggcgaag agccgattta
     1621 gctggctccg gttgccgtgc accaccacat cggccgacgc gtgcgtggcg ccgggcagtg
     1681 aatggagggt gccgttggac agttcgaggc gcaccgtgtt gttcaattcg cccgtgtcat
     1741 tgaggtacca gtcgacggtc agcgggccaa tggccgccgc ggccaccccg tcgagagacg
     1801 cggccagcag gtcgaaggcc tgctggaggt ccatccccat gatcatctcg ggccggggac
     1861 ggttgatcga ttcgatggcg atggaaccgt tgcggagctc ctgggcgccg gtcaggtata
     1921 tgtcgcg
//
LOCUS       DASCMR010000004         1931 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000022898, whole genome shotgun sequence.
ACCESSION   DASCMR010000004 DASCMR010000000
VERSION     DASCMR010000004.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1931)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1931)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1931
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000022898"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..895
                     /locus_tag="QGG16_00055"
     CDS             <1..895
                     /locus_tag="QGG16_00055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HJP23699.1"
                     /translation="LGEPIPVSALHGRGAGDLLDRLVAALPDDEPDEVAEEEPGERIV
                     GVTLVGRPNVGKSTLFNRLTGEDRAVIHDRPGTTRDTVDTVVETATGPVRFIDTAGMR
                     RKARIDEQTEYYSLVRALKAVDTADVALLVIDATLGVTHQDQRLAERVDAAGCPIVVL
                     LNKWDLCDAEQREDAMIQVGDKLHFVGEAPVLRISALSGKNVQRLWPALEETIADYRT
                     RIPTRRVNDVVRAAQAAHPAPAGVRVLYATQGATDPPTFTLFANREVPRTWLRYLERK
                     LREDLDLGSTPIKLRVRRRSE"
     gene            963..>1931
                     /locus_tag="QGG16_00060"
     CDS             963..>1931
                     /locus_tag="QGG16_00060"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: protein motif:HMM:NF018884.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004722 - protein serine/threonine
                     phosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family protein-serine/threonine
                     phosphatase"
                     /protein_id="HJP23700.1"
                     /translation="MREPVLVVLGIICLAAALGWARSARHRHRLVGRIDPEVAPDAYT
                     LAWSTFRKELHAASLYGLLALASLVNAFAEGTAGAMVFSMVAIPALVSTAWARHAVRE
                     ARMARQSIDIERRAQEALEQEDLAPKAWAGRLAPEELPNFTGFEVGRVYQAGTGLMAG
                     DFFDVFQMSDTRLAAVVGDVAGHGIEASITAFQAKYLLRTFLRQFRDPAQALEELNRQ
                     MSSQERSEEFISLVVLVFDTEADTLRYASAGHPATFLWHGREVRPLRSTGPLLMLTSD
                     ASYFSREIPLARDDMAVMYTDGLAEARSGDELFGEERIGDMVRRNPG"
BASE COUNT          310 a          613 c          654 g          354 t
ORIGIN      
        1 cttgggcgaa ccgatcccgg tgagtgccct tcacgggcgc ggtgccggcg atcttctgga
       61 ccgtctggtg gccgctctgc ctgacgacga gcccgacgag gtggccgagg aggagcccgg
      121 cgaacgcatc gtgggggtaa ccctcgtagg ccgtcccaac gtggggaagt cgacgctgtt
      181 caaccggttg acaggcgaag accgggccgt gatccacgac cgccccggta cgacacgaga
      241 caccgtggac actgtggtgg agacagccac cgggccggtg cgatttatcg ataccgcggg
      301 gatgcgacgc aaggcacgga tcgacgagca gacggagtat tactcactgg tgcgggccct
      361 caaggcggtc gacaccgcag atgtggccct gctggtcatc gacgccaccc tcggggtgac
      421 tcaccaggac cagcgcttgg ccgagcgtgt ggatgccgcg ggctgtccga tcgtggtgct
      481 cctcaacaag tgggatctct gcgatgccga gcagcgtgag gacgcgatga tccaggtggg
      541 agacaagctc cacttcgtgg gcgaggcacc cgtgctacgg atcagcgccc tgtcgggcaa
      601 gaacgtccag cggctgtggc cggcgctcga agagaccatt gccgactacc ggaccagaat
      661 tccgacccgc cgggtcaacg acgtggtccg ggctgcccag gcagcccatc cggcaccggc
      721 cggggttcgg gtgctgtacg cgacgcaggg cgcgaccgat ccaccgacct tcacgttgtt
      781 tgccaaccgg gaggtgccgc ggacctggct ccggtacctg gaacggaagc tccgcgagga
      841 tctggatctg gggtccacgc ccatcaagct ccgggtgcgt cgccgctcgg aataggccgc
      901 tccggatagg cccgtcccgg gccgaccccg aattcggaga ccctggacta cgcttgattt
      961 ctatgcgaga gccggtcctc gtcgtccttg gcatcatctg tctggctgca gccctcggtt
     1021 gggcgcgttc ggcccgccat cgccatcgcc tggtcggacg gatcgaccct gaggtggccc
     1081 ccgacgccta cacactggct tggtcgacgt tccgcaagga gctccacgca gcgtccctgt
     1141 atggcctgtt ggccctggcc tcgctggtca acgccttcgc agagggtacg gctggtgcca
     1201 tggtgttctc catggtggcc atcccggcac tggtgtccac tgcatgggct cgtcatgccg
     1261 ttcgtgaggc ccgaatggcc cgccagagca tcgacattga acgtcgggcc caggaggctc
     1321 tcgagcagga ggatctggct cccaaggcgt gggctggtcg tctcgccccc gaagaacttc
     1381 cgaacttcac gggattcgag gtcggtcggg tctaccaggc gggtaccggt ctcatggccg
     1441 gcgacttctt cgacgtgttc cagatgtcgg acactcgtct cgctgcggtg gtgggcgacg
     1501 tggccggaca tggcatcgag gcgtctatca ccgctttcca ggccaagtac ctgttgcgga
     1561 ccttcctgcg gcagttccgg gatccggcac aggcccttga ggagctgaac cggcagatgt
     1621 cgtcgcagga acgatccgag gagttcattt cactcgtcgt cttggtgttc gatactgagg
     1681 ccgacacgct tcgctacgct tcggcggggc acccggcgac gttcctctgg cacggccgtg
     1741 aggtgcggcc gcttcgttcc actggtccac tgttgatgtt gacgtcggac gcgtcctact
     1801 tcagccggga gattccgctg gctcgtgacg acatggccgt catgtacacc gatggtctag
     1861 cggaggctcg tagtggtgac gaactgttcg gcgaggaacg catcggcgac atggtgcggc
     1921 gcaacccagg g
//
LOCUS       DASCMR010000005         3554 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000029734, whole genome shotgun sequence.
ACCESSION   DASCMR010000005 DASCMR010000000
VERSION     DASCMR010000005.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3554)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3554)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3554
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000029734"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(34..708)
                     /gene="rplD"
                     /locus_tag="QGG16_00065"
     CDS             complement(34..708)
                     /gene="rplD"
                     /locus_tag="QGG16_00065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HJP23701.1"
                     /translation="MDVLSQTGAAAGSVDLDDATFGIEPNVAVMHQVVTAQLAARRSG
                     TQSTLTRAEVRGGGAKPWAQKGTGRARQGSIRSPQWRGGGVALGPKPRSYAQKTPKKM
                     VRLALRSALSDRASEGKIVVIDSWAFDAPRTKDAVAALAALGIEGRVLLVAERSDENT
                     WKSFANLGTVHVLSPGELNAYDVLVSDVVVFTKATLPIAAPAASKTASDAPVETSDDS
                     DMGEEE"
     gene            complement(717..1358)
                     /gene="rplC"
                     /locus_tag="QGG16_00070"
     CDS             complement(717..1358)
                     /gene="rplC"
                     /locus_tag="QGG16_00070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015797867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HJP23702.1"
                     /translation="MANKAIVGEKVGMTQVWDEDNRVQPVTVLRVRPNRVVQVKTTER
                     DGYSALQVTIGHRDAEKLTRPEAGHFAAGGVEAGERLVELRIDDVAGYEVGQEITVES
                     LVDQGHVDVTSVSKGKGFAGAMKRHGFKGQRASHGAHKVHRKPGAIGQCATPSRVFRG
                     KKMPGRMGNQKTTTLNLQVVQADAERELLLVRGSVPGARGATVLIRDAVKGGR"
     gene            1849..2922
                     /locus_tag="QGG16_00075"
     CDS             1849..2922
                     /locus_tag="QGG16_00075"
                     /inference="COORDINATES: protein motif:HMM:NF013740.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HJP23703.1"
                     /translation="MGGIAAIYYLRGIIEALRPLILVVLVAFFLSFALEPAVNRLERA
                     GLRRGVGTALTMMVLVAGMGGFGIQVGSLLAEQVTDFSEDVPVYLADADQWLTDSFGI
                     DNALADLRTNYDSGALAGWLGDVADDLARFGTTVVNVLFQLFTVGLFTFYLVAEGPKL
                     RRLICSFLAERHQRHVLEVWDLAIEKTGGYILSRSILALASSLVHWAAFEIIGLPSAL
                     ALALWVGIMSQFVPVVGTFIAGALPLAIALLGEPVHGLWVVIVIAVYQQVENYVLGPR
                     ITAHTMQLHVAVAFGAVIAGAAVLGVVGALLALPAAATIQAVIAAEAERHVVSEDLQE
                     ASSQRRGHGDRSDAPPESEPEPA"
     gene            complement(2990..3310)
                     /gene="rpsJ"
                     /locus_tag="QGG16_00080"
     CDS             complement(2990..3310)
                     /gene="rpsJ"
                     /locus_tag="QGG16_00080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012578474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HJP23704.1"
                     /translation="MPAGQKIRIRLKAYDHEVIDQSTKKIVETVRRTQADLRGPIPLP
                     TEKHRYTVIRGPFKDKDSREHFEMRIHKRLLDILDPSPKTVDSLQRLDLPAGVDIEIK
                     IQQV"
     gene            complement(3324..>3554)
                     /gene="tuf"
                     /locus_tag="QGG16_00085"
     CDS             complement(3324..>3554)
                     /gene="tuf"
                     /locus_tag="QGG16_00085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_499102.1"
                     /note="EF-Tu; promotes GTP-dependent binding of
                     aminoacyl-tRNA to the A-site of ribosomes during protein
                     biosynthesis; when the tRNA anticodon matches the mRNA
                     codon, GTP hydrolysis results; the inactive EF-Tu-GDP
                     leaves the ribosome and release of GDP is promoted by
                     elongation factor Ts; many prokaryotes have two copies of
                     the gene encoding EF-Tu; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HJP23705.1"
                     /translation="RHKPFFSNYRPQFYFRTTDVTGMIELPAGTEMCMPGDNTTMTVE
                     LIAPIAMDEGLRFAIREGGRTVGAGAVTKILK"
BASE COUNT          572 a         1199 c         1129 g          654 t
ORIGIN      
        1 cgaccggctt aacgatgacg tcacgtgcgt ccttcactct tcttctccca tgtcggagtc
       61 atcggaggtt tcaaccggtg cgtccgaggc cgtcttcgac gccgccgggg cagcgattgg
      121 caaggtggcc ttggtgaaga ccacgacgtc actgaccagc acgtcatagg cgttgagctc
      181 gcccggcgag agcacgtgga ccgtgcctag gttggcgaag ctcttccagg tgttctcgtc
      241 ggagcgctcg gccaccaaca gaacacgacc ctctataccg agggctgcca gagcggctac
      301 cgcgtccttg gtgcggggcg catcgaaggc ccagctatcg attacgacaa tcttgccctc
      361 tgaggcccgg tcgctcaacg ccgaacgcag ggcgaggcga accatcttct tgggcgtctt
      421 ctgggcgtaa ctgcggggct tggggcccag cgcgacaccg ccaccacgcc actgcggcga
      481 gcggatcgaa ccctgccggg cacggcctgt gcccttctgg gcccacggct tggcaccgcc
      541 accccggacc tcggcccggg tcagcgtgct ctgggtcccc gaccggcggg cagccaactg
      601 agcggtcacg acttggtgca tcacggcgac attcggttcg atgccgaaag tggcatcgtc
      661 gagatcaacg gaacctgccg ctgcgccggt ctgactcaga acgtccatct tcgccatcac
      721 cggcctccct tcacagcatc acgaatgagg acagtggcgc cacgggcacc gggcaccgaa
      781 ccacgtacca gcagtagctc gcgctcggca tcggcctgca cgacctgaag gttcaacgtg
      841 gtggtcttct ggttacccat ccggcccggc atcttcttgc cccggaacac cctggacgga
      901 gtggcgcact ggccgatggc tcccggcttg cggtgcacct tgtgcgcacc gtgggaggcc
      961 cgctggccct tgaatccgtg gcgcttcatg gcgccggcga aaccctttcc cttacttacc
     1021 gaggtcacgt caacgtggcc ctgatcgacg agcgactcaa cggtgatctc ctggccaacc
     1081 tcgtagccag ccacgtcatc gattcggagt tccaccagac gctcgccggc ttcaaccccc
     1141 ccggcggcga aatggccggc ctcgggacgg gtgagcttct cggcgtcacg atggccgatg
     1201 gtgacctgga gtgcggagta accatcgcgc tcggtggtct tgacctggac gacgcgatta
     1261 ggacggacac gaagcacggt gacgggctgg acacgattgt cctcgtccca cacctgtgtc
     1321 atgccgacct tctcgccgac gattgccttg ttggccatga tggctcctgc gactggtgcc
     1381 ggtgatctgc cggcattggt ggccctgacg gaccattcac gcgaacgctc cgcacgggca
     1441 caagcccggc ggagcggcga ttctgttttg ccgtgcggtt cgccggtccc ggtctcccga
     1501 aaccgccgcc tacccggacg tcgattcacc cagcgggccg accacggacg gtctgccaga
     1561 agtgcagggg acaacgatac ggcggtccgg gttgggccac aaccggctaa ccatcaggtc
     1621 gttgtgccgc gcgtcatggc caaccggagc cctcccaccg accaaggatc cccggccgcc
     1681 tccaagccga ccgataacgt cgccaacagt gcgagatccc ttcaattcca acgatcgcgg
     1741 ggccatgtcc tggcccgaca catgaccggc aacaccgacc accggctccc gcccagcgac
     1801 gaggggcgat ctctgccgtc gtgggcgcga cgggcgatcc taagcctgtt ggggggaatc
     1861 gccgcgatct actacctccg agggattatc gaggcgctcc ggccgctcat cctggtggtg
     1921 ctggtggcct tcttcctgtc gttcgccctc gagcccgcgg ttaaccgcct cgaacgggcc
     1981 ggcctccgcc gaggggtggg cacggcgctc accatgatgg tgctggtggc cgggatgggt
     2041 ggcttcggta tccaggtcgg cagtctgctg gctgagcagg taaccgactt cagcgaggac
     2101 gtccccgtct acctagccga cgccgaccag tggctgaccg actcgtttgg catcgacaat
     2161 gccctagccg atctacggac caactacgac tcgggcgccc tcgccgggtg gctgggtgac
     2221 gtggccgacg atctggctcg cttcggaacc accgtggtca acgtcctgtt tcagttgttc
     2281 accgtcgggc tcttcacctt ctacctggtg gccgagggac ccaagctgcg gcggctgatc
     2341 tgttcgttcc tcgccgagcg ccatcagcgc cacgtgctcg aagtctggga cctggccatc
     2401 gagaagaccg gcggctacat cctctcccgg agcatcttgg cgttggcatc gtcgctcgtc
     2461 cactgggcgg ccttcgagat catcggcctg ccgtcggcac tcgccctagc cctgtgggtg
     2521 gggatcatgt cccagttcgt accagtcgtc gggacattca tcgccggcgc cctcccacta
     2581 gccatcgccc tgctcggcga gccggtccac gggctctggg tggtcatcgt gatcgctgtg
     2641 taccagcagg tcgagaacta cgtattgggg ccgcgtatca ccgcccacac catgcagttg
     2701 cacgtggcgg tggccttcgg cgctgtgatc gccggggcgg ccgtcctcgg cgtggtcggg
     2761 gctctgctcg ccctcccagc cgccgccacc atccaagccg tgatcgccgc agaagccgaa
     2821 cgccacgtgg tgtccgagga cctccaggag gccagcagcc aacggcgggg ccacggcgac
     2881 cggagcgacg cccctcccga atccgagccc gagcctgcct gaaaacggtc gaagcgcccc
     2941 cggaggggcg cttccactct cgttcttcga tcgcagaccc gggaggcgct tacacctgct
     3001 ggatcttgat ctcgatgtcg acgccagccg gcaggtccag gcgctgcagc gagtccacgg
     3061 tcttgggcga gggatccagg atgtcgagca ggcgcttatg aatgcgcatc tcaaagtgct
     3121 cccgggagtc cttgtccttg aaagggccac ggatgaccgt gtagcggtgt ttctcggtcg
     3181 gcagggggat cggaccgcga aggtcggcct gggtccgtcg aaccgtctca acgatcttct
     3241 tcgtcgactg gtcgatgacc tcgtggtcgt aggccttcag tcggatccgg atcttctgcc
     3301 ctgcaggcat ctacgtcgtc ctgctacttc aggatcttgg tgacggcgcc agcaccaacg
     3361 gtgcggccac cttcacggat ggcgaagcga aggccctcgt ccatggcgat cggagcgatg
     3421 agctcgacgg tcatggtcgt gttgtcgccg ggcatgcaca tctcggtacc ggcgggcagt
     3481 tcgatcatgc cggtcacgtc agtggtccgg aagtagaact gcgggcggta gttggagaag
     3541 aacggcttgt gacg
//
LOCUS       DASCMR010000006         2790 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000033902, whole genome shotgun sequence.
ACCESSION   DASCMR010000006 DASCMR010000000
VERSION     DASCMR010000006.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2790)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2790)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2790
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000033902"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1965
                     /gene="tkt"
                     /locus_tag="QGG16_00090"
     CDS             <1..1965
                     /gene="tkt"
                     /locus_tag="QGG16_00090"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HJP23706.1"
                     /translation="APEQAIDNERRAIDVVRSLAMDAPHAARSGHQGTAMALAPLAHV
                     LWTRVLTYDADDPSWPDRDRFILSAGHASILLYSMLHLTGHGLTLDDLREFRQWGSAT
                     PGHPEVGHTAGVEVTTGPLGQGIANGVGMAIAERNLRARFGAELTDHHTFVVCGDGDL
                     AEGISHEAASLAGHLGLGRLIAVYDDNHVTIDGPTELALSDDAPARFRSYGWHVIDLG
                     EAAEDLDAMEGGIRAAMAVDDRPSLVVLRSHIGHPSPDVDTSAVHGYSLTDDAISETK
                     QRMGLPDEPFHVPDDVATLYRAAGRRGAGVRTEWKARLAASDIDRSVWNAAWAGGGVD
                     GWADALPTWEVGTAVATRKAGNACLQALLDVVPGLIGGGADLTGNTGTTISGHGVQGP
                     ECPEGRQLFFGVREHAMGAICNGLALHGGMLPVNGTFLVFSDYMRGAVRLAALSGAKN
                     IFIWSHDSVGVGEDGPTHQPVEHAAALRTIPDLRVIRPADANETAGAWRTIVDGAGPA
                     ALLLTRQDVPVLSGTGDHAAVARGGYVLAEPEGAPEVILIGTGSEVSVAMDAADTLTT
                     AGRSVRVVSMPCMEDFANQDSAYRNSVLPGGVPTLSIEAGVTFGWDRWADRCIGIDRF
                     GASAPGGRVIAELGITAEALVAAATELLST"
     gene            1990..>2790
                     /gene="tal"
                     /locus_tag="QGG16_00095"
     CDS             1990..>2790
                     /gene="tal"
                     /locus_tag="QGG16_00095"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004801 - transaldolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HJP23707.1"
                     /translation="MTRLHDLHAEQGQSPWLDNLRRGWITSGELRRWVDRGVRGITSN
                     PSIFQKAMTGTDAYDEQLRGLVDDGSSIVESYWALVVRDILDALDILRPVYDESDGVD
                     GYVSVEVDPTLAPDTEGTIAAARALDERINRPNLYVKIPATAEGIPAIRQMISEGRSV
                     NVTLVFSLDRYADVMEAYVSGLEGCLGDLSSVSSVASFFISRTDNEVDRRLDAIGTDD
                     ALGLRGRAAVAQGQVAYDMFQKVFSGQRWDALAARGARVQRPLWASTST"
BASE COUNT          464 a          945 c          895 g          486 t
ORIGIN      
        1 gctccagagc aagcgatcga caacgaacgt cgagccatcg acgtggttcg gagtctggcc
       61 atggacgcgc cccacgccgc tcgttcgggg catcagggga ccgccatggc cctggccccg
      121 ctagcccacg tgctgtggac cagggtcctc acctacgacg cagacgatcc gtcgtggccc
      181 gaccgcgacc ggttcatcct ttcggccggc catgcatcga tcctgttgta ctcgatgctg
      241 cacctgactg gtcacggcct gactcttgat gacctccgcg agttccgcca atgggggtcg
      301 gcaacacctg gccatcccga ggtcggacat acggccggtg tcgaggtcac taccggccct
      361 ctcggtcagg gcattgccaa cggcgtcggc atggctattg cagagcgcaa cctccgggcc
      421 cgcttcggag cggagttgac cgaccaccac accttcgtgg tttgtggaga cggggacctg
      481 gcagagggca tcagtcacga ggcagcatcc ctcgccggcc acctgggcct cggtcgcctg
      541 atagccgtgt acgacgacaa ccacgtgacc atcgacgggc cgaccgaact ggccctgtcc
      601 gatgatgctc cggctcgctt ccgctcctac ggatggcatg tcatcgattt aggggaggct
      661 gccgaggacc tcgacgccat ggagggcggc atccgtgccg ccatggccgt cgacgaccgt
      721 ccctcacttg tagtactgcg gagccacatt ggtcatccgt cgcccgacgt agacacctcg
      781 gcggtgcatg gctactccct caccgatgac gccatcagcg agaccaaaca gcgcatgggc
      841 ctacccgacg agcccttcca cgtacccgat gacgtggcga ctttgtatcg ggcggcaggg
      901 cgccggggtg ccggcgttcg gaccgaatgg aaagcccgtc tggccgcaag tgacatcgac
      961 cgctccgtgt ggaacgccgc gtgggctggc ggaggcgtcg acggctgggc cgatgccctc
     1021 cccacgtggg aggtaggcac tgcagtggct acccggaagg ccggcaacgc ctgtcttcag
     1081 gcccttctcg acgtggtccc cggtctgatc ggtggcggtg cagacctaac cggaaatacc
     1141 ggcaccacga tttcgggcca cggagtccag gggccagagt gccccgaggg gcgtcagctc
     1201 ttcttcgggg tgcgggagca cgcgatgggc gccatctgca acggcctggc cctccacggt
     1261 ggaatgctcc cggtcaacgg cacgttcctc gtgtttagcg actacatgcg aggcgccgtg
     1321 cgtctggccg ccctctcggg agcaaagaac atctttatct ggagccacga ctcggtgggc
     1381 gtcggcgagg acggacccac ccaccaaccg gtcgagcacg ctgcagccct gcggaccatc
     1441 ccggaccttc gggtgatccg acccgccgat gccaacgaga ccgccggagc ttggcggacg
     1501 atcgtcgatg gggccgggcc ggctgccctt ctcctgaccc gccaggacgt accggtgctt
     1561 tccggcaccg gcgatcacgc ggcggtggcc aggggcggct acgtattggc tgagcccgag
     1621 ggtgcacccg aggtcatctt gatcgggacc ggcagcgagg tctccgtggc gatggatgcc
     1681 gctgacaccc tgacgacggc cggtcgatcc gtgcgagtcg tgtccatgcc ctgcatggag
     1741 gacttcgcca accaggacag cgcctaccgg aactcagtgt taccgggtgg cgtccccacc
     1801 ttgtcgatag aggctggtgt gacgttcggc tgggaccgct gggccgaccg ctgcatcggc
     1861 attgaccgct tcggcgcctc agcgcccggc ggacgggtga tagccgagtt gggcatcacc
     1921 gctgaggccc tggtcgccgc cgccaccgaa ctgctttcca cctagcccgc cccataccag
     1981 ggagttccga tgacccgact gcacgacctc cacgctgaac aaggccagag cccctggcta
     2041 gacaacctcc gacgggggtg gatcacctcg ggcgagctcc gtcgttgggt ggatcgcggt
     2101 gtgcggggaa tcacttccaa cccttccatc ttccagaagg ccatgacggg caccgatgcc
     2161 tacgacgaac agctacgtgg tctggtcgat gacggttcgt cgatcgtgga gagttactgg
     2221 gcccttgtcg tccgcgacat ccttgacgcc ttggacatcc tccgtccggt ctacgacgag
     2281 tccgacggcg tcgacggcta cgtctccgtt gaggtggacc cgacactggc tccggacacc
     2341 gagggcacca tcgccgctgc ccgggcgctc gacgagcgga tcaaccgtcc gaacctatac
     2401 gtcaaaatcc cagccactgc cgaggggatt ccggctatcc gccagatgat ctctgaaggc
     2461 cggagcgtga atgtgaccct cgtcttctcc ctagaccgat acgccgacgt catggaggcc
     2521 tacgtgtctg gactcgaagg gtgtctcggc gatctgtcga gcgtctcgtc agtcgcctcg
     2581 ttctttatca gccgaaccga caacgaggtc gaccgtcgac tagatgccat cggcactgac
     2641 gatgccctcg gactgcgggg tcgggccgcc gtggcccagg gccaagtggc ctacgacatg
     2701 ttccaaaagg tgttcagcgg ccagcgttgg gatgccctgg ccgctcgtgg tgcccgcgtg
     2761 cagcgacccc tctgggcatc tacctcgacc
//
LOCUS       DASCMR010000007         2769 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000038405, whole genome shotgun sequence.
ACCESSION   DASCMR010000007 DASCMR010000000
VERSION     DASCMR010000007.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2769)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2769)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2769
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000038405"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1724)
                     /locus_tag="QGG16_00100"
     CDS             complement(<1..1724)
                     /locus_tag="QGG16_00100"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HJP23708.1"
                     /translation="MDRYYSEAWDELTAPGSPFAWSTTDVRGVPTRTYDSAPPDLALL
                     WAGAAAHGDADYLVYRDERLTYTETHAAVDALAAHLASVGVGHGDRVALAMRNLPEWV
                     VGYWATVRLGAAVVGMNAWWTGPEMEFGLSDSAPKVLLCDGERFERVTPHLDVLRADR
                     SLHVVATRADGVDLGHDAVHWADALAGAVDLPAPPPVAIDTDDDACVFYTSGTTGHPK
                     GAVLTHRGAVSNLLNLAFWQTMQASAEAKAVAAGEPPAGSDKQTGDAMPGSVLGVPLF
                     HVTGCNCCLHPVTAVGGKLVLMHRWNPEVALELIERERPTTFTGVPTMARELINSPDF
                     AIRDTSSITSLGGGGAAVQPDLVQKIEDRMEGRPSTGYGLTETNGVITINAGQYFLAK
                     PASAGSPCPVMEARIVAEDGTDQSPGGHGELWVRGGNVFRGYLNRPEANAEALTDGWF
                     HTGDIGYLDEDGFLFLVDRAKDMVLRSGENVYCAEVEAAIYEHPAVAEAAVFAVPDER
                     HGEVVGVAVVLLPDAELTAADLQAHTRTLIAGFKVPEHVWFRDESLPRNANGKFVKRQ
                     LREDLVGTP"
     gene            1815..2282
                     /locus_tag="QGG16_00105"
     CDS             1815..2282
                     /locus_tag="QGG16_00105"
                     /inference="COORDINATES: protein motif:HMM:NF024844.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HJP23709.1"
                     /translation="MTEIAFDDLEGLRATITEEWSDWGPEYEMTQEKVNQFAELTGDH
                     QWIHVDVERATAGPFGGPIAHGFFTLSLLPILNRTGEVRITGQTNVVNYGADGLRMLA
                     PVPVGSTLHARNRITDVREHKKGTLVATRVAIHVVGNDDVPAVLYDALSLYQG"
     gene            complement(2316..>2769)
                     /locus_tag="QGG16_00110"
     CDS             complement(2316..>2769)
                     /locus_tag="QGG16_00110"
                     /inference="COORDINATES: protein motif:HMM:NF024950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJP23710.1"
                     /translation="DYGDVWQGALDVMLTGMTLTIRAALGHLRASSAGRIVNVSSTEG
                     VGGSPSTSAYTAAKHGVVGLTRALAVELGETGITVNAVGPGPIDTGMTAGIPEEAKVK
                     FARRRVPARRYAEPEEVAHGILHLALPASSYITGHLLMVDGGMTVKNN"
BASE COUNT          430 a          938 c          952 g          449 t
ORIGIN      
        1 ggtgttccga caaggtcctc gcggagctgg cgcttgacga acttgccgtt ggcgttgcgg
       61 ggcaacgact cgtcgcggaa ccacacgtgc tcgggcacct tgaaccctgc gatgagggtg
      121 cgggtgtggg cctggaggtc ggcggccgtc aactcggcgt cggggaggag cacgactgcc
      181 accccgacga cttcgccgtg ccgctcatcg ggcacggcga agaccgctgc ctcagcgacg
      241 gccgggtgct cgtagatggc ggcttccacc tccgcgcagt acacgttctc accgctgcgg
      301 aggaccatgt ccttggcccg gtcgaccagg aacaggaagc cgtcctcgtc cagatagccg
      361 atgtccccgg tgtggaacca gccgtcggtc agggcctcgg cgttggcttc cggacggttc
      421 aggtagcccc ggaagacgtt cccgccccgc acccacagtt ctccgtggcc tcccggcgac
      481 tggtcggtgc cgtcctcggc cacgatgcgg gcctccatga ccggacacgg cgacccagcc
      541 gacgccggct tggccaagaa gtactggccg gcgttgatgg tgatgacgcc gttggtctcg
      601 gtgaggccgt agccagtgct ggggcggcct tccatccggt cttcgatctt ctggaccagg
      661 tcgggctgca cggctgcacc gccaccgccg agcgacgtga tgctggacgt gtcccggatg
      721 gcgaaatcag ggctgttgat gagctcacgg gccatggtgg gcacaccggt gaacgtcgtc
      781 ggtcgctccc gttcgatgag ttccagggcc acctcggggt tccaacggtg catcagcacg
      841 agcttgccgc cgaccgctgt gaccgggtgc aggcagcagt tgcagcccgt cacgtggaac
      901 agcggtacgc ccagcacgga gccgggcatg gcgtcgccgg tctgcttgtc cgacccggcc
      961 ggcggctcgc cagccgccac ggccttggcc tcggcgcttg cctgcatcgt ctgccagaag
     1021 gccaggttca gcaggttgga caccgcaccc cgatgggtca gcacggcacc cttggggtgc
     1081 ccggtggtgc ccgaggtgta gaagacgcag gcatcgtcgt cggtgtcgat ggccacgggt
     1141 ggtggtgccg gcagatcgac cgccccggcc agggcgtccg cccagtggac ggcgtcatgg
     1201 cccagatcga ccccgtcggc ccgggtggct acgacgtgga gcgatcggtc ggcccgcagc
     1261 acgtcgaggt gaggcgtcac cctctcgaac cgttcgccgt cgcacaacag gaccttcggt
     1321 gccgaatcgg acaacccgaa ctccatctcg gggccagtcc accaggcgtt catcccgacc
     1381 acggccgcgc cgaggcgtac cgtggcccag tagccgacaa cccactcagg caggttgcgc
     1441 atggccagtg ccacccggtc cccgtgcccg acgcctactg aagccaggtg ggcggctagg
     1501 gcgtcgaccg cggcgtgggt ctcggtgtag gtcaggcgct cgtcacggta gacgagatag
     1561 tcggcgtctc cgtgggccgc cgcgccggcc catagcaggg ccaggtcggg gggcgccgag
     1621 tcgtaggttc gggtcggaac tccgcggacg tcggtggtcg accaggcgaa cggggatcca
     1681 ggcgcggtca actcatccca cgcctcgctg tagtacctgt ccaatgcccc tcctcggtct
     1741 cgtcgggacc atgatggtgg caacatggga ccacggaaaa gccggggcac acccgaggtt
     1801 acgggagcac cacaatgact gagatcgcct ttgacgacct ggagggcctg cgcgccacca
     1861 tcacagagga gtggagcgac tggggacctg aatacgagat gacccaggag aaggtgaacc
     1921 agttcgccga gctgaccggt gaccatcagt ggatccacgt ggacgtggag cgggccaccg
     1981 ccggcccgtt cggcggcccg atcgcccacg ggttcttcac cctcagcttg ctgcccatcc
     2041 tgaaccgcac cggcgaggtc aggatcaccg gccagaccaa cgtcgtgaac tacggcgccg
     2101 acgggcttcg gatgctggca ccggtgccgg tgggttcgac gctgcacgcc cgcaaccgga
     2161 tcaccgatgt ccgcgagcac aagaagggca cgctggtggc cacccgggtg gccatccacg
     2221 tggtgggcaa cgacgacgtt cccgctgtgc tctacgacgc cctcagcctg taccagggct
     2281 gatcgtgtcg gatcggggcc ggtccccgct gggccctagt tgttcttgac cgtcatgcca
     2341 ccatcgacca tcagtaggtg gccggtgatg tagctcgatg ccggcagggc caggtggagg
     2401 atgccgtggg ccacctcttc gggttcggca tagcgccggg ctggcacccg ccgtcgggcg
     2461 aacttcacct tggcctcctc ggggatcccg gccgtcatgc cggtgtcgat cgggccggga
     2521 cccacggcgt tgacggttat ccccgtctct cccagttcca cggccagggc ccgggttagg
     2581 cccaccaccc cgtgtttggc cgccgtgtag gccgacgtgg acggtgagcc acccacccct
     2641 tcggtggatg agacgttcac gatccgtccg gcggatgatg cccgcaggtg gcccagagcc
     2701 gcccgaatgg tcagggtcat gccggtgagc atcacgtcca acgctccctg ccagacgtcg
     2761 ccgtagtcg
//
LOCUS       DASCMR010000008         3271 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000046736, whole genome shotgun sequence.
ACCESSION   DASCMR010000008 DASCMR010000000
VERSION     DASCMR010000008.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3271)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3271)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3271
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000046736"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..570)
                     /locus_tag="QGG16_00115"
     CDS             complement(<1..570)
                     /locus_tag="QGG16_00115"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF012946.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HJP23711.1"
                     /translation="MTRVAVVGAGPSGLAQLRAFASAAKQGAEVPEVVCYEKQDDWGG
                     LWNYTWRTGVDEYGESVHGSMYRYLWSNGPKECLEFADYGFEEHFGKPIASYPPREVL
                     WDYIKGRVEKSGVRDQIRFRTTVREVTYDGAAGDGAGMFTVTSHDLDGGHTSSEKFDH
                     VVVASGHFSVPNVPHYPGFERFLGRILHAH"
     gene            complement(593..>3271)
                     /locus_tag="QGG16_00120"
     CDS             complement(593..>3271)
                     /locus_tag="QGG16_00120"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HJP23712.1"
                     /translation="EEFFQFTVAWHLSSGPWLLALLVCLGATGWMAWRTRTNRWLIAT
                     VAVAWTGWSVDLFDFLRLPTTPWIFVFVVIGIASAAQAMRDRAFEWTAATTAIATIGW
                     VTLQTNEESFNVKALFRQVARWLEFPLDVAEGLLISGYGPWHLPDMPWLFIFVLLVGG
                     TGWLAWQRRSTAWAMTTALIGWMAAVSLYEPWHIPALPWIVIAGLFGVVGWKLGGWRL
                     ALLSVGFILYAAFIGEPAEKAGAETRWDKTMITLSAVLVAVPIAAFLGGLIGLVAAKR
                     RRVEQFLIPIMNLTQAFPHFTFLIPIGVFIGLSHKAGVIATIAYAIPPMARVTILGVQ
                     GISKEVIEAGIMGGCTRRQMLWKVELPAARQSLLVGINQVVMECLAMVVIASFVGTAG
                     LGQDLLFRLTGLHIGAGTEIGIAIVVMAITLDRLSQALGRLQPTHHEEGVPFWKRHPY
                     LLASGGVLAGGLLLAQVWDAAFRVPNSWMWGHEAFWEWLVDHAKTDIAWWELSGGWWL
                     VAFLAAIAGAGWLAWSTRRYRWLVGAVAVSWVGWSVGLFDFLHLSTEPWIYVFVAAGV
                     AAVVYGLSVRTKLMAQISEKGYSQLEAAARARESLRFTWTTAMTVLVTLGWVTLRTTD
                     ESFTVNLRDQTIAFRDVLESWILLPLRDAYLTIPWVGLVLLFGVIGYFINGRRPALMA
                     AGMIAFISLAGFWWQAMWNFYQLTFAVLLAIIFGVPFGIWAATTARRNTAVQVVLDFF
                     QTFPSFVYLFPAIMFFDVSETAIIVAVVLSASVPAIRYTIFGIQNVPESLVEASTMTG
                     CTRRQTLWKVKLPMAVPEIMLGINQTIMFGLFMVMIAGLIKTTGLARELIEAQPNIDS
                     GRAIVAGIAVACIGMASDVLISEWADKRKRQLGLIS"
BASE COUNT          673 a          993 c         1057 g          548 t
ORIGIN      
        1 gtgggcgtga aggatacggc ccaggaacct ttcgaagccc gggtagtggg gcacgttggg
       61 caccgagaag tggcctgagg cgaccacgac gtggtcgaac ttctcggacg acgtgtggcc
      121 gccatccaga tcgtgggacg taacggtaaa catcccggcc ccgtcgccag cggccccgtc
      181 ataggtcacc tcgcgcacgg tggtccggaa ccggatctgg tcacgtacgc cgctcttttc
      241 gacgcggcct ttgatgtagt cccacaggac ctcacggggc gggtaggagg cgatgggctt
      301 cccgaagtgc tcctcgaatc cgtagtcggc gaactccagg cactccttgg gtccgttgga
      361 ccacaggtag cggtacatcg acccgtgtac cgattcgccg tactcgtcga caccggtgcg
      421 ccacgtgtag ttccataggc caccccagtc gtcctgcttc tcgtagcaga cgacctcggg
      481 gacctcggca ccctgtttgg cggcggatgc gaaggctcgc aactgggcca gaccgctggg
      541 gcccgcgccg accacggcaa ctctggtcat gtcgtttcct ttcggcctca agttaggaaa
      601 tgagaccgag ttggcgcttg cgcttatcgg cccattcgga gatgagtacg tcggaagcca
      661 tgcctatgca ggccacggca attccggcga cgatagcccg gccactgtcg atgttgggct
      721 gagcctcgat gagctctcga gccagccccg tggtcttgat gagtccggcg atcatcacca
      781 tgaagaggcc gaacatgatt gtctggttga tgccgagcat gatctccggc acggccatgg
      841 gcaacttcac cttccagagg gtctgtcgtc gtgtgcagcc tgtcatcgtc gatgcctcga
      901 ccaacgactc cggtacgttt tggatgccga atatcgtgta ccggatggct ggtacggatg
      961 cggacaggac cacggcgacg atgatcgctg tttcggagac gtcgaagaac atgattgctg
     1021 ggaacaggta gacgaacgac gggaaggtct ggaagaagtc gaggaccact tgtactgccg
     1081 tgttacgcct cgccgtggtc gctgcccaga tcccgaacgg aacaccgaag atgatcgcca
     1141 gcaacacggc aaaggtcagc tggtagaagt tccacatggc ctgccaccag aacccggcga
     1201 gggagatgaa ggcgatcatg cctgcggcca tgagggcggg ccggcgaccg ttgatgaagt
     1261 atccgatcac accgaagagc aggacgaggc ccacccatgg aatggtgagg taggcatcgc
     1321 gcaggggtag caggatccag gactcgagca catctcgaaa ggcgatggtt tggtcgcgga
     1381 ggttcacagt gaaggactcg tcagtggttc ggagggttac ccagccgagc gttacgagca
     1441 ctgtcatggc cgtcgtccag gtgaagcgaa gcgactctcg ggcccgggcg gccgcctcga
     1501 gttgggagta gcccttctcg gaaatctggg ccatcaactt ggtccgtacc gataagccgt
     1561 acaccacggc ggcgacgccg gccgccacga agacgtagat ccacggctcg gtggacaggt
     1621 gcaggaagtc gaacaggcct acggaccacc caacccagct cacggctact gcgccgacca
     1681 gccagcgata gcgccgagtg ctccaggcca gccatccggc acctgcgatg gcggccagga
     1741 aggccaccaa ccaccatccg ccggacaact cccaccacgc tatgtcggtc ttggcgtggt
     1801 ccacgagcca ttcccagaag gcctcgtggc cccacatcca cgagttgggt acgcggaagg
     1861 cggcatccca gacctgggcc aggaggaggc caccagccag cacccctccc gaagccagga
     1921 ggtatgggtg acgcttccag aaaggcacgc cctcttcgtg gtgggtcggc tgaagtcgac
     1981 ctagcgcctg gctgaggcgg tccagggtga tggccatgac gacgatggcg attccgattt
     2041 cggttccggc cccgatatgg agtcccgtga ggcggaacag gaggtcctgc cccaggccgg
     2101 cggtgccgac gaaggatgcg atgaccacca tggccaggca ctccatcacc acctggttga
     2161 tgccgactag gagagattgg cgggcggcgg gaagctctac tttccacagc atctgacgtc
     2221 gcgtgcagcc acccatgatc cctgcctcga tgacctcttt cgagatcccc tggacaccga
     2281 ggatcgtcac cctggccatt ggtgggatgg cgtaggcgat tgtggcgatg acaccggcct
     2341 tgtgcgagag gccgatgaaa acgccgatcg ggatgaggaa ggtgaagtga gggaaggcct
     2401 gggtcaggtt catgatcggg atcaggaact gttcgacccg acgtcgctta gctgccacca
     2461 ggccgataag gcctccaagg aaggcggcga tcggaactgc cacaagaaca gcggacagcg
     2521 tgatcattgt cttgtcccag cgagtttccg ctccggcctt ctccgcaggt tcgccgatga
     2581 aggcggcgta gaggatgaac ccgaccgaca ggagggcgag gcgccaaccc cccagcttcc
     2641 atccgacgac accgaagagg ccggcgatca ctatccatgg cagggcgggg atatgccacg
     2701 gttcgtagag gctcacagcg gccatccacc cgatgagggc ggtagtcatc gcccacgcgg
     2761 tgctccggcg ttgccaggcc agccagcctg ttccgccgac gaggaggacg aagatgaaca
     2821 gccacggcat gtcgggaaga tgccaaggtc cgtagccgct gataaggagt ccttcggcga
     2881 catccagggg gaactccagc catcgtgcga cctggcggaa gagagccttg acgttgaaag
     2941 attcctcgtt tgtttgcagg gtcacccaac cgatagtggc gatggccgtg gtagcggccg
     3001 tccactcgaa cgcccgatcc cgcatggctt gggccgcaga ggcgatgcct atgaccacga
     3061 agacgaagat ccacggcgtg gtcgggaggc gcaggaagtc gaataggtcg acagaccaac
     3121 ccgtccaggc caccgccaca gtggcaatca gccagcggtt ggttcgggta cgccatgcca
     3181 tccagcctgt ggccccgagg cataccagaa gagccaacag ccacggtcca ctggaaaggt
     3241 gccacgccac ggtgaactgg aagaactcct c
//
LOCUS       DASCMR010000009         1552 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000065089, whole genome shotgun sequence.
ACCESSION   DASCMR010000009 DASCMR010000000
VERSION     DASCMR010000009.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000065089"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1267)
                     /locus_tag="QGG16_00125"
     CDS             complement(<1..1267)
                     /locus_tag="QGG16_00125"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012348.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase family protein"
                     /protein_id="HJP23713.1"
                     /translation="MIEMTNDAFRTRCEEADIHTVEVAIGDTYGHLRGKRVPVDRYFA
                     EVEESGASIADAVFILNVCDELIDHEIVNMDNGFLDTRIVPDPASARLLTHRPGYALV
                     FCDSFDEHGEPHVLAPRAVLAAQIERCRALGLDPVVATEPEFYMCTIADDGTWVPVRP
                     HIKYSSLTDAPDLEQVLAAMRSGLAGAGLAVESSNQEYGPSQIEVNHGPADAMRAAED
                     CILYRSIVKQVAEQHGMRATFMPKPFTEESGSGLHVHTSLRSDDGGNAFADSAGAPND
                     LMGRWVAGILEHAPALTLLGGPTANGPRRIRPYTFAPTHVHWGLDNRTVLARCIVEAG
                     SAANRVEFRSAGADANPYLLIAGILAAGCDGIERSLELPPMSEGDMYTEPGDCAPLAT
                     DLTGSIEAFEGSGLASMLGEEFSRSFVSLA"
     gene            complement(1305..>1552)
                     /locus_tag="QGG16_00130"
     CDS             complement(1305..>1552)
                     /locus_tag="QGG16_00130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23714.1"
                     /translation="AVVGLFGGRIPFGLGAVPHEARFLSSFWGSRAQMDELLVLARRE
                     PSVVQDVEVLGLSQAQEAHNRLRTGDVRGRLVLDPIR"
BASE COUNT          307 a          494 c          491 g          260 t
ORIGIN      
        1 gagccaagct cacgaagctg cgcgagaact cttcgcccag catcgacgcc aagccgctgc
       61 cctcgaaggc ctctatagag cctgtgagat cagtggctag cggtgcacag tcgcccggtt
      121 ccgtgtacat gtcgccctcg gacatgggcg gcaactccag cgagcgttca atgccatcgc
      181 agccagcggc caggatcccg gcgatcagca ggtacgggtt ggcatcggct cccgccgagc
      241 ggaactcgac ccggttcgcg gctgatccgg cctccacgat gcaacgtgcc agaacggtcc
      301 gattgtccag cccccaatgc acgtgggtgg gagcaaacgt atacggccga attcgtcgag
      361 gtccgttggc agtcggccct cccagcaacg tgagtgctgg ggcatgctcg aggatgccgg
      421 ccacccaccg gcccatgaga tcgttgggtg caccagcact atcagcaaag gcattgcccc
      481 cgtcgtcgga ccggaggctg gtatggacgt ggagcccgga gcccgattcc tcagtgaacg
      541 gcttgggcat gaacgtggcc cgcatcccgt gctgctcagc cacctgcttg acgatggaac
      601 ggtagagaat gcagtcctcg gcggcccgca tcgcgtcggc tggaccatgg ttgacctcaa
      661 tctggctggg tccatactcc tggttggacg attcaacagc cagaccggca ccagctaggc
      721 cggaacgcat ggcggccagc acctgctcca agtcaggggc atcggtcagc gagctgtact
      781 tgatgtgggg ccgcaccggc acccacgtgc cgtcgtcggc aatcgtgcac atgtagaact
      841 caggctcggt ggcgaccacc ggatccaaac cgagggcacg acaccgctcg atctgggcag
      901 cgagcacagc ccggggcgca agcacgtgtg gttcgccgtg ttcgtcgaaa ctgtcgcaaa
      961 acaccaaggc ataaccggga cggtgggtca agaggcgggc cgacgccggg tcagggacga
     1021 tccgggtgtc gagaaagccg ttgtccatat tgactatctc gtggtcgatc aactcgtcgc
     1081 acacgttgag gatgaacaca gcatcggcga tcgaggcgcc actctcctcc acctcggcga
     1141 aatagcggtc cacgggcacg cgcttgcccc gtaagtggcc ataggtgtcg ccgatggcca
     1201 cttctacagt gtgaatgtcg gcctcttcgc atctggttcg aaaggcatca ttggtcatct
     1261 cgatcatcgg tcttccctcg gtatctcagt ggtcaagagt ctggtcatcg gatcggatcg
     1321 aggacgaggc ggccccgcac atcgccggtc cggaggcggt tatgagcctc ctgggcctgg
     1381 gacaggccga ggacctctac gtcctgcacg accgaaggct cacgtcgggc gaggaccagg
     1441 agttcatcca tctgggcccg cgagccccaa aagctggaga ggaaccgggc ttcatggggc
     1501 accgcaccga ggccgaacgg gatacgccca ccgaacaagc caacgacagc ca
//
LOCUS       DASCMR010000010         5488 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000067503, whole genome shotgun sequence.
ACCESSION   DASCMR010000010 DASCMR010000000
VERSION     DASCMR010000010.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5488)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5488)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5488
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000067503"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..271)
                     /locus_tag="QGG16_00135"
     CDS             complement(<1..271)
                     /locus_tag="QGG16_00135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23715.1"
                     /translation="MTRSPTVRSLRDRIPRSGRPLGLLLAFTGMFLVSTDALLVRVAE
                     RDSAVDGWTIACMVGLFSSPVAWSLAVRNIGRDFGHELVRWRRPLL"
     gene            345..1862
                     /locus_tag="QGG16_00140"
     CDS             345..1862
                     /locus_tag="QGG16_00140"
                     /inference="COORDINATES: protein motif:HMM:NF013080.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HJP23716.1"
                     /translation="MRRPNVLLVTLDQWRGDCLSAAGHPSVSTPNLDRLAAEGVRFAS
                     HFAQAAPCGPSRASLLTGTYQHVHRSVLNGTPLDARFTNVALAMRSAGYDPVLFGHTD
                     TTVDPRTVPAGDPRLGDYEGPLPGFRVGLDLPEHREPWYRWLEARGHDVSDRERFLRP
                     RDDVAIPVGRGASWPPPPFAAEETETAFLVGEVIDELARLEGVGDPWFVHASIYRPHP
                     PFTAPAPYHDLVDPATVPDPLVDGGVDTHPFVAAARAFGAYRPPGDDLDLRQVRATYY
                     GMMAEVDAQVGRLLTALDDLGATDETVVVVTSDHGEMLGDHGLMSKLGFHDQAFYIPL
                     IVRAPGGTGIETACIGGAGQVVKDFTENIDVMPTVLDLAGVEVPRQCQGRSLRPFLNG
                     SVADGGLPDGWRTAAHWEFDFRAWAGSRELDGLDGHLCNLAVHRDHRGKYVHFAGMAP
                     IFFDLEGDPDECEPLSDHPLMAGYAAALLDWRMATDEQELSDHLALPGGMIVLGT"
     gene            2097..2351
                     /locus_tag="QGG16_00145"
     CDS             2097..2351
                     /locus_tag="QGG16_00145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23717.1"
                     /translation="MRSNKLRSSNRSFHNLRHPQQDLFLALNQAAGYGHFAGFNDRAV
                     RTIMSLGQQMVADRQRPVPPVHKAADTEANRDIADLDLAA"
     gene            2556..3212
                     /locus_tag="QGG16_00150"
     CDS             2556..3212
                     /locus_tag="QGG16_00150"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019846.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HJP23718.1"
                     /translation="MGDGDFDLADAYAVETPDDNRNLYARWADSYESGFIKENAYQYH
                     LGVAGAFLASATPDDGPVLDVGCGTGLVGEALRLDHRCPSLLDGLDLSPEMLEQAGTK
                     STASGEAVYSSLHVGDLTAVLPLVGNSYGAVVSCGTFTHGHVGPDAFDELYRIARPGA
                     LFAIGINPDHFTAHGFEARFATDVAAGTIIEPTIHRVVTYGAGPNVDQTSPVAVFRLR
                     "
     gene            complement(3388..3966)
                     /locus_tag="QGG16_00155"
     CDS             complement(3388..3966)
                     /locus_tag="QGG16_00155"
                     /inference="COORDINATES: protein motif:HMM:NF012655.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HJP23719.1"
                     /translation="MSRPRDPELDAKIIEAATEEFHAVGYGSMSLGSIAVRAGVRPGA
                     VYTRFRDKRDVLRAILEHVSTLRAERIRNLPGDDPYENLLYATRETHTSVSWEHAFTI
                     PALALMGTEEANEVRDLIRDDMARNRHMELLRPALKQAVAAGVLPDNMSVNYASAMIL
                     GAYFTFRLGVDSEHWPADMPEKLLQTLGAKAP"
     gene            4219..5085
                     /locus_tag="QGG16_00160"
     CDS             4219..5085
                     /locus_tag="QGG16_00160"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF012630.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031012 - extracellular matrix [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="matrixin family metalloprotease"
                     /protein_id="HJP23720.1"
                     /translation="MSYRKRLPAKRLGLGLVATALLVSSFSGALLSQDSPTPDQGDHE
                     LHDRANNEAYAWANNPADRKWRVELPVSVRNLLTLTGAGTTRRADRVDNDPASGLALA
                     GSTAMFADETGSALWPNCTPIRVTVDTVESSADSTAAALATRDAITELGELTGLEFTP
                     TTDSTHTVGDNPAPQPNTIQIIWVNRDTGLLEDHELGAAEVWHRKVVDRLIVFQAIVL
                     LSDEILTKHDLDTNTGGDFIRTTLIHELGHAVGIGHSVDDGSVMYPRLNRKASVTTAD
                     RAAFAYAGSRGC"
     gene            complement(5183..5305)
                     /locus_tag="QGG16_00165"
     CDS             complement(5183..5305)
                     /locus_tag="QGG16_00165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23721.1"
                     /translation="MVSFDLTTVKEGILVDQDDSYECADNPDGDHHQLKRRRES"
BASE COUNT          980 a         1752 c         1767 g          989 t
ORIGIN      
        1 ccaggagtgg gcgtcgccac cggaccagct catgtccaaa atcgcgaccg atgttccgga
       61 cggccagact ccaggccacc ggcgaggaga agaggccgac catgcaggcg atagtccagc
      121 cgtcgaccgc agagtcgcgt tctgccaccc gaaccaatag ggcgtcggtg gagaccagga
      181 acatcccggt gaaggccagc agcaggccga ggggtcgtcc ggatcggggg atccggtccc
      241 tgagggaccg cacggttggt gacctagtca tcgccggacg ttagtggcgg tcgcgttcgc
      301 cacctgctgt ccgggagtcg gcggggctgg cagtatgcga gacgatgcga cgaccaaacg
      361 ttctgctggt gaccctggac cagtggcgtg gtgactgcct ttcggcggct ggccacccat
      421 cggtgtccac cccgaacctg gaccgtcttg ccgcggaggg ggtgcggttc gcttcgcact
      481 tcgcgcaggc agcgccgtgc ggacccagtc gggccagctt gcttaccggc acctaccagc
      541 acgtgcaccg gtcggttctg aacggcaccc cgctggacgc ccgcttcacc aacgtggccc
      601 tggccatgcg gtccgcgggg tacgacccgg tgctgttcgg ccacaccgac accacggtcg
      661 acccgcgcac cgtgcccgcg ggggatccga ggctcgggga ctacgagggt ccgctgcccg
      721 ggtttcgggt ggggcttgac ctacccgaac atcgggaacc ctggtaccgg tggctggagg
      781 cccggggtca cgacgtgtcg gatcgcgagc ggtttctgcg cccccgagac gacgtggcca
      841 tcccggtggg tcggggggcg tcgtggccgc cgccaccgtt tgccgccgag gagaccgaga
      901 cggcgttcct ggtcggggag gtgatcgacg aactggctcg gctggagggc gtcggcgacc
      961 cgtggtttgt ccacgcgtcg atctaccggc ctcacccacc gttcacggcg ccagcgcctt
     1021 accacgatct cgttgatcca gcgacagtgc ccgatcctct cgtggacggc ggagtcgata
     1081 cccatccgtt cgtggccgcc gcgcgcgcct tcggtgccta tcggccgccg ggtgacgacc
     1141 ttgacctccg gcaggtgcgg gccacctact acgggatgat ggccgaggtc gacgcccagg
     1201 tgggccgcct cctcacggct ctggacgatc tgggggccac cgacgaaacc gtggtggttg
     1261 tgacctcgga ccatggcgag atgctcgggg accacggcct catgtcaaag ttggggttcc
     1321 acgatcaggc gttctacatc ccgttgatcg tccgcgctcc tggaggcacc ggaatcgaaa
     1381 cggcctgtat cggtggggcg ggccaggtgg tgaaggactt caccgagaac atcgacgtga
     1441 tgcccacggt gctcgacctg gccggtgtcg aggtgccccg gcagtgtcag ggccggtcac
     1501 tgcggccctt cctcaacgga tcggttgccg acggtggtct gccggacggc tggcgtaccg
     1561 ctgcgcattg ggaattcgac ttccgggcgt gggctggttc cagggagttg gatggactgg
     1621 acggtcacct gtgcaacctt gcggtgcacc gggaccaccg aggcaagtac gtgcacttcg
     1681 ccgggatggc gccgatcttc ttcgaccttg agggtgatcc ggatgagtgc gaacccctta
     1741 gcgaccatcc gttgatggcc gggtacgcgg cggctctcct ggactggcgg atggccaccg
     1801 acgagcagga actctcggac catctggcac tgcccggagg aatgatcgtc ctcggcacct
     1861 gaccgtcgga tagccacggt cggttgccca gtaacggggt gcgaccgggg tcacctgtga
     1921 ccacagtcgc cgtggattcg cgtgacccat gccccagaat ctatgcagcg atctaccgat
     1981 gggtaacttc caaatggagg ggccatcgga gcaggtcaga cacaacaaca gcttcgacga
     2041 gccctccggc cgaatccgga cgacggccgt cggaccacag tgaaacagag caagccatgc
     2101 gttccaacaa gctgcgttcc agcaaccgtt cattccacaa cctccggcac ccacagcagg
     2161 acctctttct ggccctgaac caggctgccg gctacggcca cttcgccggt ttcaacgacc
     2221 gggccgtgcg gacgatcatg tccctcggac agcagatggt ggctgaccgg cagcgtccgg
     2281 ttccgcccgt tcacaaggcg gccgacaccg aggccaaccg ggacatcgcc gatttggatc
     2341 tcgctgcctg atcgggcgcc tttcggggcg aaccaacacg cgaatcggag tcggggccaa
     2401 tgccccggct ccgtcgcgtt ccggggaggc aagtggtgcg tttccgaaag ctcggaggcc
     2461 ttgtgctact ccgagccctc ggatagatct ttcaccctcc ctcctgtggg ggggtccatg
     2521 ggctcaatga tcaattcgag ggggaggtgg agtagatggg tgacggcgat ttcgacctgg
     2581 ctgatgccta cgcggtcgag actccggacg acaaccgaaa cctgtacgcc cggtgggccg
     2641 acagctacga atcggggttc atcaaggaga acgcctacca ataccacctc ggggtagcag
     2701 gggcctttct cgcctcggcg actcctgacg acgggccggt gctcgatgtc ggttgcggca
     2761 ccggtctggt cggtgaggcg ttgcggctcg accaccgctg cccgtcacta ctcgacggcc
     2821 tcgacttgtc gccggagatg ttggagcagg ctggcaccaa gtcgacagcg tcgggcgagg
     2881 ccgtctactc gagtctccac gtgggcgacc tgacagccgt gctgcccctg gtcggcaatt
     2941 cctacggggc cgttgtcagt tgtggcacgt tcacccatgg ccatgtgggg cccgacgcgt
     3001 tcgacgagct gtatcgcatt gcccggccag gggcgctgtt cgccatcgga atcaaccccg
     3061 accacttcac ggcccacggc ttcgaggccc ggttcgccac tgatgtggcc gccggaacca
     3121 tcatcgagcc gaccatccat cgggtggtca cctacggtgc cggacccaac gttgaccaga
     3181 cgtcgccggt cgccgtattc cgtcttcgct gacctgtcag aacgtccgga cccgtcaggt
     3241 ccggatcagg agtctgttca gaaagcgcac gccatgtcgg cgccacaaca cagtggggac
     3301 ttgatctttc cgtggtcgtt cgggcacttg gagacctgca cggtcgaacc gtcgtccttg
     3361 gtcagggtcg tggtagtcgg tggaggttta aggggccttc gctccaagag tttgcaggag
     3421 cttttcgggc atgtcggcgg gccagtgctc cgaatcgacg ccgagtctga aggtgaagta
     3481 ggcgccgagg atcattgctg acgcgtagtt gacggacatg ttgtccggca ggactcctgc
     3541 ggcaacagcc tgcttgagtg ctgggcggag aagttccata tggcggttac gggccatgtc
     3601 gtcgcggatc agatcccgga cctcgttggc ctcctcggtg cccatgagcg ccagggccgg
     3661 gattgtgaag gcgtgttccc aggagaccga agtatgcgtc tcgcgagtgg cgtacagaag
     3721 gttctcgtag gggtcgtcgc cggggaggtt tcgtatccgt tccgcccgaa gggttgagac
     3781 atgttcgagg atggctcgta acacatcgcg tttgtcccgg aaacgggtgt agacggcacc
     3841 ggggcggaca ccggcccgga cggcaatcga ccccaggctc atggagccat agccgacggc
     3901 gtggaactcc tcggttgccg cctcgatgat cttggcgtcg agttccgggt ctcgggggcg
     3961 ggacacggtc agccccgggg ctgcgcgacg acgcggagga acgggcgttg ggtgtcccat
     4021 ccgtcgggga agcggatcgc cccgttggta gtcgaaactg caaagtccgg tgctaggtca
     4081 acaagctcta gtgccatctg gatacctcca tcctctggga gacaccttat acgccaacgg
     4141 atatagacgc aaaacaataa cgaaaaagat aaccgaaaat agtgttgaca aacatgatta
     4201 ccgtcatata ataacggtat gagttatcgt aaacgacttc ccgccaagcg acttggcctc
     4261 ggcctggtgg ccaccgccct cctcgtcagc tccttttccg gtgcgcttct ctcgcaagat
     4321 tcgccgacac ccgaccaggg cgaccacgag ttgcacgacc gggccaacaa cgaggcctac
     4381 gcctgggcca acaacccggc tgaccggaaa tggcgagtcg agcttccggt gtccgtgcgc
     4441 aacctcctta ccctcaccgg ggctggcacc acccgccgcg ccgaccgggt cgacaacgat
     4501 ccagcctccg gactcgccct tgcagggagc acggcgatgt tcgccgatga gaccggttcc
     4561 gccctgtggc ccaactgcac gccgatccga gtcacggtcg acaccgtcga atcttcggca
     4621 gatagcacag ctgccgccct ggccacccgg gatgccatca ccgaacttgg cgaactcacc
     4681 ggcctggagt tcaccccgac aactgactca actcacaccg tcggagacaa tccggcaccc
     4741 cagcccaaca ccatccagat catctgggtc aaccgtgaca ccggcctact cgaagaccac
     4801 gaactcggtg cagccgaggt ctggcaccgg aaggtcgtag accgcctcat cgtcttccag
     4861 gcgatcgtcc tgctctccga cgagatcctc accaagcacg atctcgacac gaacacaggt
     4921 ggagacttca tccggaccac cctcatccat gaactcggcc acgcagtcgg cattggccac
     4981 agcgtcgatg acggctcggt catgtatccc aggctcaata ggaaggcttc ggtaaccacc
     5041 gccgaccggg ctgcgttcgc ctatgcgggc agtcggggct gctgagcagc caaccccaga
     5101 accggagtcc cagtttcacc aggtcaatcg aggaccggaa gcgccaccgg ttcagtgcat
     5161 aaaccaccac atgcggtcac catcacgatt ctcggcgtcg tttgagttgg tggtggtcgc
     5221 cgtcggggtt gtcggcacat tcgtagctgt cgtcttggtc gacgaggatg ccttccttca
     5281 ccgtggtcaa gtcgaaggag accactttgg gtggttgaaa cctgccgagc cgttttcaat
     5341 aacctgccga gaccccctgg tggggtctcg gcaggtttat gttcgcccag cgtgtgaagg
     5401 gtttctggac tgtggggccg acgtctatcc cagtaaaacg cgagatctat cccacgtggc
     5461 ttgagcactc ggagcgagcg aggagaac
//
LOCUS       DASCMR010000011         5996 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000068983, whole genome shotgun sequence.
ACCESSION   DASCMR010000011 DASCMR010000000
VERSION     DASCMR010000011.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5996)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5996)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5996
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000068983"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1197
                     /gene="lysA"
                     /locus_tag="QGG16_00170"
     CDS             <1..1197
                     /gene="lysA"
                     /locus_tag="QGG16_00170"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HJP23722.1"
                     /translation="LFVYDEDHLRARCREAVVAFGDGVAYAAKAFLCGAMARLAYEEG
                     MYLDVATGGELFVARHAGVPGERLVMHGNNKSDRELAMAVEEGVGRIVVDSFDELDRL
                     DALAVATGARPRVLLRITPGVEAHTHEFVTTGQDDSKFGFTVSSGLALAAVERAVTAE
                     SVELVGLHAHIGSQVFEVGAFARAVEVLTDFAAPFGLPELSVGGGLGVPYVEGESAPT
                     LTEWAAGIRAVCDAAGVTAHVSAEPGRAIVAAAAVTLYRVGTVKDLPGIRTYVAVDGG
                     MSDNPRPVLYGSGYETMLPRAAAAERPRAVRVVGKHCESGDLLVREGWVPEDLMVGDV
                     LATPVTGAYGHSMGSNYNHVLRPAVVFVAGGEAREVVRRETFDDLVARDAPAPGLGDE
                     AVESGS"
     gene            1229..2545
                     /locus_tag="QGG16_00175"
     CDS             1229..2545
                     /locus_tag="QGG16_00175"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HJP23723.1"
                     /translation="MNDVSLGSRDHVRIGLLGCGHVGAALASLVADRRAEVARRHSLD
                     LEVTRIAVRNTAIDRDVPVDDGAFTTDAASVVADPEVDVVVEVMGGIEPARELVMAAL
                     SAGKPVVTANKELLANHGAELYALAADNGVDLLFEAAVAGAIPIMRPLRESLAGEPIE
                     RVMGIVNGTTNFILSRMTDDGASYADALAEAQSLGYAERDPTADVEGYDAGAKAAIMA
                     TVAFGARVVAGDVYHEGISDISVADIEFAANLKHCIKLLAVAEQTMADDGQPQVGVRV
                     HPTLVPLDHPLASVNGSFNAVFIEGGAAGDLMLYGRGAGGRPTASAVLGDLIDAAANL
                     RRGSAPGIGVLERALIAPIDDVTSAYYLNLEVDDRPGVLAAVAAVFGEHGVSIRSMEQ
                     EGLGDEARLVFITHGARERELRATLTDLRSLDAVRAVGSVLRVIGG"
     gene            2579..3955
                     /gene="thrC"
                     /locus_tag="QGG16_00180"
     CDS             2579..3955
                     /gene="thrC"
                     /locus_tag="QGG16_00180"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HJP23724.1"
                     /translation="MRYVSTRGSAPVLDFGDTLLAGLADDGGLYVPESWPLLADGGQG
                     DYVETAVEVMAPFVAGSIHEDDFAAMVSEAYAAFNVPDVTPLVELSDGIHLLELFHGP
                     TLAFKDVALQLVGRLFDHELSRRGERVTIVGATSGDTGSAAIEACRDRDAVDIVILHP
                     AGRISDVQRRQMTTVQSANVHNVAVDGTFDDCQDLVKAMFADVAFRDEVRLSAVNSIN
                     WARVMAQVVYYVVAAERLGGRRAPVAFSVPTGNFGNVFAGHVARLSGLTVPQLVVGSN
                     TNDVLTRFFTEGTMGITEVVPTTSPSMDIQVSSNLERLLFEINGRDGAAVGAQLDDFR
                     ATGTFRLDPDQHASLASGWAGARFNDDAVRACIADEADRSGLVLDPHTAVGVLAARAC
                     RRDPSIPMVALATAHPAKFPDAVEAATGFRPGLPGHLADLHDRPERLTALPADLAVIE
                     DFVRSHKR"
     gene            4016..5164
                     /gene="apgM"
                     /locus_tag="QGG16_00185"
     CDS             4016..5164
                     /gene="apgM"
                     /locus_tag="QGG16_00185"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00306.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046537 -
                     2,3-bisphosphoglycerate-independent phosphoglycerate
                     mutase activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HJP23725.1"
                     /translation="MKYVICVPDGCADLPVPELDGRTPLEVAHMPMLDTLAARAVVGR
                     AAVIPEGMPPGSDVGNMSIMGFDPAQFHTGRAPIEVAAMGRTLRPDQTAFRCNLVVVR
                     DGVMVDYAGANPSSAEGAAVVAALQDEVAPRYEGVEFLAGVGFRNAMIAPKEWIDADC
                     TPPHDLSGDPIVLPKGPAAGRLIEVMEASREVMEHFDMEADQTWLWGQGFQPQVPSFR
                     ETHGVEAGLVTAVDLVRGIGVLSGMKICDIPGATGWYDTDYEGKRDIALAELEAGLDL
                     FVIHVEATDEAGHAGDVAAKVEALEHWDRRILADLVPALEAMGPWRLLMLPDHATPLT
                     TRTHTPDPVPYLLVDSTVDGPGGTFTEVGVADRSPVPGHTLMGRLLAG"
     gene            5519..>5996
                     /locus_tag="QGG16_00190"
     CDS             5519..>5996
                     /locus_tag="QGG16_00190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23726.1"
                     /translation="MDSTQLERGTLESKDRDELTTIATALGGKPGSRARKAEIVDLIL
                     DLSGGGNGSSSNGGRPPTVATEPVAPAEESAEEPLAEWEVAAEAEEAVGTDGDQSADS
                     DASAEANAETSTEADTDRSGDQKSDRDGGRGQGGQNRDRQGGQNRDRQGGQNRDRQG"
BASE COUNT          926 a         1971 c         2063 g         1036 t
ORIGIN      
        1 ctgttcgtct acgacgagga ccacttgcgg gcccgctgtc gcgaggccgt ggtcgcattc
       61 ggcgatggtg tggcctacgc cgccaaggct ttcctttgtg gggccatggc ccgcttggcc
      121 tacgaggagg gcatgtacct cgacgtggcc acaggtggcg aactcttcgt cgcccgccac
      181 gccggggtgc ccggcgaacg tctcgtaatg catggcaaca acaagagtga ccgtgagctg
      241 gccatggcgg tcgaggaggg ggtgggtcgc atcgtcgtcg actcgttcga cgaactggac
      301 cgcctcgatg cccttgcggt cgccaccggc gcccgacccc gggtactgct acgcatcaca
      361 cccggcgtgg aggcccacac ccacgagttt gtgaccaccg gtcaggacga ttccaagttc
      421 ggcttcaccg tgtccagcgg cctggccctg gcggccgtgg agcgggccgt cacggccgaa
      481 tcggtagaac tggtcggact gcacgcccac atcggcagcc aggtcttcga ggtcggggct
      541 ttcgcccggg ccgtcgaggt gctgaccgac ttcgccgcgc cgttcggcct gccggagctc
      601 tcggtgggtg gcggcctcgg tgtcccctac gtggaagggg agtcggcacc cacgctgacc
      661 gaatgggccg ccggcatccg tgccgtgtgc gacgcggcag gcgtgacagc ccacgtttcg
      721 gccgaaccgg ggcgggccat cgtggccgct gcggcggtca ccctctaccg ggtgggcacc
      781 gtcaaggacc ttcccggcat ccgcacatat gttgccgttg acggcggaat gagtgacaac
      841 ccccgcccgg tcctctacgg ctcgggctac gagaccatgc tgccccgcgc cgccgccgcc
      901 gagcgtcccc gagccgttcg agtggtgggc aagcactgcg agtcgggtga ccttctggtg
      961 cgcgagggct gggtgcccga ggatctgatg gtgggcgacg tgctggccac gccggtcacc
     1021 ggcgcctacg gccactccat gggctccaac tacaaccacg tcctgcgtcc cgccgtggtg
     1081 ttcgttgccg gcggcgaggc ccgtgaggtc gtccggcgcg agacgttcga cgatctggtg
     1141 gcccgtgatg ccccggcccc ggggcttggg gatgaagccg tcgaatccgg gtcctgacgg
     1201 gcccgttgtg cccggtaccg tcgtggccat gaacgatgtt tctttgggat cccgggacca
     1261 cgtccgcatt ggcctgctcg gctgcggcca cgtgggcgca gccctcgctt cactggtggc
     1321 cgaccggcgt gccgaggtgg ctcgccgtca tagcctcgat ctcgaggtga cgcggattgc
     1381 tgtccgcaac acggccatcg accgggacgt gccggttgac gacggagcct tcaccaccga
     1441 tgcagcgtcg gtggtcgccg atcccgaggt cgacgtggtc gtcgaggtca tgggtggcat
     1501 cgagccggcc cgggaactgg tgatggccgc cctgtccgcg ggcaaaccgg tggtgaccgc
     1561 caacaaggaa ctcctggcta atcacggcgc cgagttgtac gccctggcgg ccgacaacgg
     1621 cgtcgatctg ctgttcgagg cggcggtggc gggggccatc ccgatcatgc gaccgctgcg
     1681 cgagtcgttg gccggtgagc ccatcgaacg ggtcatgggc atcgtgaacg gcacgaccaa
     1741 cttcatcctg tcgcggatga ccgacgacgg agccagctac gccgacgcgt tagctgaggc
     1801 ccagagcctg gggtacgccg agcgtgaccc gacggccgat gtcgagggct acgacgccgg
     1861 ggccaaggcg gccatcatgg ccaccgttgc cttcggggcc cgggtggtgg ccggcgacgt
     1921 ctaccacgag ggcatctcgg acatctcggt ggccgacatc gagtttgccg ccaatctgaa
     1981 gcactgcatc aagctgttgg ccgtggccga gcagacaatg gccgacgacg gccaaccaca
     2041 ggtgggcgtg cgggtgcatc ccacgctggt tccgctggac catccgctgg cctcggtgaa
     2101 cggcagcttc aacgccgtgt tcatcgaggg cggggcagcc ggtgacctca tgctctacgg
     2161 ccggggcgcc ggtggtcggc ccaccgcgtc ggccgtgctg ggtgacctga tcgacgcggc
     2221 ggccaacttg cggcggggga gcgccccggg catcggcgtg ctcgaacgcg cgctcatcgc
     2281 cccgatcgac gacgtcacgt ctgcctacta cctcaacctc gaggtcgacg accgtcccgg
     2341 cgtgttggcc gcggtggccg ccgtgttcgg cgaacacggc gtgtcgatcc gctccatgga
     2401 acaggaaggc ctgggtgacg aagcccgcct ggtgttcatc acccacggag cgcgtgaacg
     2461 cgagctacga gccacgttga ccgatcttcg ttcgttggac gccgtccggg ccgtaggcag
     2521 tgtcctgcgg gtcatcggcg gctgaccggc cgtctcccac ggatcaccgg acgacatcat
     2581 gcgttacgtg agtacccggg gatcggcccc cgttctggac tttggcgaca ccctgctggc
     2641 cggcctggcc gacgacggtg ggctgtacgt gcccgagtct tggcctctac tagccgacgg
     2701 aggacagggc gactacgtcg agacggcggt agaggtgatg gcaccgttcg ttgccggatc
     2761 tatccacgag gacgacttcg ccgccatggt gagcgaggcc tacgcggctt tcaacgtccc
     2821 ggacgtgacg ccgctggtcg agttgtccga cggcatccac ctgttggagt tgttccacgg
     2881 gccgacgctg gccttcaagg acgtggccct gcagctggta ggtcgcttgt tcgatcatga
     2941 actctcccga cgcggcgaac gggtgaccat cgtgggcgct acctcgggcg acaccggttc
     3001 ggcggccatc gaggcctgcc gggaccgcga cgcagtcgac atcgtgattc tccacccggc
     3061 gggtcggatc tcggacgtcc aacgccgaca gatgacaacc gtgcagtcgg ccaacgtgca
     3121 caacgtggcc gtggacggca cgttcgacga ttgccaggac ctggtcaagg ccatgttcgc
     3181 cgacgtggcc ttccgcgacg aggttcgcct ctcggcggtc aactccatca actgggcccg
     3241 ggttatggct caggtcgtct actacgtggt ggccgccgag cgcctcggag gacgccgagc
     3301 tccggtggcc ttctcggtgc ctaccgggaa tttcggcaac gtcttcgccg ggcacgtggc
     3361 ccgtctgtcc ggtttgactg tgccccaact ggtggttggc agcaatacca acgacgtcct
     3421 gacccggttc ttcaccgagg ggacgatggg catcaccgag gtggtgccca ccacgtcgcc
     3481 cagcatggat atacaggtgt cgtccaacct cgagcgtctg ttgttcgaga tcaacggccg
     3541 tgatggtgcc gcggtgggtg cccaactgga cgacttccgg gccaccggta cctttcggct
     3601 ggatccggat cagcacgcct ccctagccag cggttgggcc ggcgcccgct tcaatgacga
     3661 cgctgttcgg gcctgcattg ccgatgaggc tgatcgctct ggactggtgc tcgacccgca
     3721 cacggcggtc ggtgtgctgg ccgcccgggc ctgccgccgt gatccgtcga tccccatggt
     3781 ggccctggcc acggctcacc cagccaagtt ccccgatgcg gttgaggcgg ccaccggctt
     3841 ccggccgggt ttaccaggtc atctggccga cctccacgat cggcccgaac gcctgacggc
     3901 cctgcccgcc gacctggcgg tcatcgagga cttcgtgcgg tcgcataagc ggtgaccagt
     3961 ctgaaccgat ggtctggaat gatccctcca tggagagcag cgtgaagtat ccgtcatgaa
     4021 gtacgtcatc tgtgttcccg acggttgcgc cgacctgccg gtgcccgaac tcgacgggcg
     4081 tactccgctt gaggtcgctc acatgccgat gctggacact ctggctgccc gggccgtcgt
     4141 gggtcgtgcc gcagtgattc ccgaggggat gccaccgggg agcgacgtcg gcaacatgtc
     4201 gatcatggga ttcgatccgg cccagttcca caccggtcgg gcccccatcg aggtggcagc
     4261 catgggccgt acgctgcgcc ccgaccagac ggccttccgg tgcaatctgg tggtggtccg
     4321 cgacggcgtg atggtcgact acgcaggcgc caacccgtcc agcgcggagg gtgccgcagt
     4381 agtggccgcc ctgcaggacg aggtcgcacc gcgctacgaa ggggtcgagt tcctggctgg
     4441 tgtggggttc cgcaacgcca tgatcgctcc caaggagtgg atagatgccg actgcacgcc
     4501 cccgcacgat ctctccggtg atcccatcgt gttgcccaag ggcccggcgg ccggacggct
     4561 catcgaggtc atggaggcct cccgggaggt gatggagcat ttcgacatgg aggccgacca
     4621 gacatggctc tggggccagg gcttccagcc gcaggtgccc tcgttccgcg agacccacgg
     4681 cgtcgaggcc gggctggtca ccgcggtcga cctggtacgt ggcatcggcg tgctctccgg
     4741 catgaagatc tgcgacatcc ccggcgccac cgggtggtac gacaccgact acgagggcaa
     4801 gagggacatc gccctcgccg agttggaagc aggtctcgac ctgttcgtga tccacgtgga
     4861 ggccaccgac gaggccggtc acgctggcga cgtggctgcc aaggtggaag ccctcgaaca
     4921 ctgggaccgg cggatcctgg ccgacctggt tccggcgttg gaagccatgg gcccgtggcg
     4981 cctgctgatg ctcccggacc acgccacacc gttgaccacc cggacccaca ccccggatcc
     5041 cgtgccgtac ctgctggtgg attcgactgt cgacggaccg ggtggcacgt tcaccgaggt
     5101 cggggtggcc gaccggtctc cggttcccgg acataccctg atgggaaggc tcctagccgg
     5161 ctgatttcct tgccctgtaa cggatccggg gattccgacc aggggcatgt tgctgtcgtt
     5221 cgcggcgatt cggtagagtg ggacggtcgt cgggcgggcg acgtgttctc cggaaacctc
     5281 gtttcctcct catggactcc acttcgtggc cccaatcgtg ggggatggac aggttccgga
     5341 gatgccgtcc acgacacacc ctccatcccg atcttcggtg gtggacggtg gattccgatg
     5401 ggaaccgaac ccggttcgca tccatccgat gggcctctgg tccttggaag acccgcaggg
     5461 cttctggccc tcgaaaaacc gaagggccat cggccctcga gaaacaggtg ttgtgagcat
     5521 ggactccacc caactggaac gcggaacgct ggaaagcaag gaccgcgacg aactgacgac
     5581 gatcgccact gcgctgggcg gcaagcccgg ttcgcgtgcc cgcaaggctg agatcgtcga
     5641 cctgatcctg gatctgtccg gcggaggcaa cggttcgtcc tccaacggtg gacggcctcc
     5701 taccgttgcc accgagcctg tggcacctgc tgaggagtct gcggaggagc cgctggccga
     5761 gtgggaggtg gctgccgagg ccgaggaggc agttggcacc gatggtgatc agtccgccga
     5821 ctcggatgcc agcgcagaag ccaacgcaga aaccagcacg gaagccgaca ctgaccgctc
     5881 tggcgaccag aagtcggatc gtgacggtgg tcgtggtcag ggtggccaga atcgtgaccg
     5941 ccagggtggc cagaatcgtg accgccaggg tggccagaat cgtgaccgcc agggtg
//
LOCUS       DASCMR010000012         2277 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000089439, whole genome shotgun sequence.
ACCESSION   DASCMR010000012 DASCMR010000000
VERSION     DASCMR010000012.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2277)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2277)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2277
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000089439"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(182..1618)
                     /gene="pyk"
                     /locus_tag="QGG16_00195"
     CDS             complement(182..1618)
                     /gene="pyk"
                     /locus_tag="QGG16_00195"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: protein motif:HMM:TIGR01064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HJP23727.1"
                     /translation="MARRTKIIATIGPASDDEATLRDLIRAGMDVARLGLAHNTIDEA
                     ADRMARIRRIAAIEGRYVGILVDLPGPKVRAASFGETAVEIVEDSRVNLRVGGRVSTA
                     SDIEIDYAGLLADVEAGDRLSIGDGRVVLEVQEMDGDRVFTRVAHGGVLTGSPGLHIP
                     SDRLSMRAPTDDDLVAVERFVELGADMLAISFVRSAEDLARVPVDPHPAGPIVVAKIE
                     TRAALEDLPAIIEASGAVMVARGDLGSECSIEELPILQKEIIRQCIALGRPAITATQM
                     LETMVANPEPTRAEASDVANAVWDGSSAVMLSGETAVGVDPVNVVTTMSRIAERADDA
                     FDHRGWMAELSDLRMTDTDDPDTSITDAMTQATARAIDELGIGTILCISGSGFTVRSM
                     ARFRPAARIIGLSSNERTVGQLTLSWGTEPIHLPEEGDLDDRVNAALEAARNRGSVKP
                     GELVGVLAGTDARSRSTNALRIERVPAV"
     gene            complement(1642..2220)
                     /locus_tag="QGG16_00200"
     CDS             complement(1642..2220)
                     /locus_tag="QGG16_00200"
                     /inference="COORDINATES: protein motif:HMM:NF013756.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HJP23728.1"
                     /translation="MIDRDLKRCLGQMMKGVQVVAATHNDVTRAYTSHWVCQVSFDEP
                     VLMASVSPKHDTYPLIVGSGRFAVSILAGDQVEPGQYFSYPGHRFRYVADEWIADADG
                     WPVVPDALAWLGCEVEDRIVGRYDHDLFFARVVAFGEGRLGEAPLLYSSRHGWRVGGE
                     AAREKGESVRDRLTARVEARFGFGSTDSTNVP"
BASE COUNT          397 a          784 c          698 g          398 t
ORIGIN      
        1 tcgtgcggat agtcgtggtc gttgttcttg ccgcactgac tgcgggtatc tggagccagc
       61 gggtcgagct cgccgactgt gcggccgagt gctcgtgtgc cctcttcggc caggtcgtcc
      121 aaatcccagc cgacctgaat ccgaactgct gaggcacctc aactccgagg ccccgtcctg
      181 atcaaacagc gggcacccgt tcaattcgaa gggcgttggt ggaccgcgaa cgcgcgtccg
      241 ttccggctag cacgccaacc agttcaccgg gtttcaccga acccctgttc cgggccgcct
      301 cgagggcagc gttgactcgg tcatcaagat cgccttcctc ggggaggtgg atcggctcgg
      361 tcccccagct caacgtcagt tgaccgaccg tccgttcgtt cgagctcagg ccgatgatgc
      421 gcgccgctgg acggaaacgc gccatcgaac gcacggtgaa cccgcttccg gagatgcaca
      481 ggatggtccc gatccccagc tcatcgatgg cgcgggccgt ggcctgggtc attgcgtcgg
      541 taatggacgt atctggatca tcggtgtcgg tcattcgcag gtccgaaagt tccgccatcc
      601 atccccggtg gtcgaaggca tcgtcggccc gctcggcgat ccgagacatg gtggtcacca
      661 cgtttaccgg atccacaccg accgccgtct cacccgaaag catcaccgcg ctcgatccgt
      721 cccagacggc attggccaca tctgaggcct cggccctagt cggctcagga ttggcgacca
      781 ttgtctcgag catctgcgtc gcggtgatgg ccggtcgacc caaagcgatg cactgccgga
      841 tgatctcctt ctggaggatg ggcagctcct caatactgca ttcgctccca aggtccccac
      901 gggccaccat caccgcgcca gacgcctcga tgatggccgg caggtcttca agggcggctc
      961 gggtttcgat cttcgcgacc acgatcgggc cggcaggatg gggatccacg gggacacggg
     1021 ctaggtcctc ggccgatcgc acgaacgaga tggccagcat gtcggccccc agttcaacga
     1081 agcgctcgac ggccaccagg tcgtcgtcgg tcggtgcgcg catcgagagc cggtccgaag
     1141 ggatatgcag ccctggactg cccgtcagga caccgccgtg ggccacccgg gtaaacaccc
     1201 ggtcgccgtc catttcctgg acttccaaca ccacccggcc atcaccgatg ctcagacggt
     1261 cgcccgcttc cacgtcggcc aggagccccg cgtagtcgat ctcgatatct gatgccgtgc
     1321 taactcggcc tcccactcgc aggtttaccc gcgagtcctc gacaatctcc accgccgtct
     1381 caccgaacga tgccgcacga accttggggc ccgggaggtc aaccaagatc cccacatagc
     1441 gaccctcgat ggccgcgatc cgacggatcc gtgccatacg gtcggcggcc tcgtcgatcg
     1501 tgttgtgggc caaaccaagg cgggccacgt ccattccggc ccggatcagg tcacggaggg
     1561 tggcctcgtc atcggatgct ggtccaatgg tggcgatgat cttcgtcctg cgggccatgc
     1621 cgacaggcta ccgacccgtt ctcaggggac gttggtggag tcggtactac cgaatccgaa
     1681 ccttgcctcc acccgtgccg tgagacggtc gcggaccgac tcgcccttct ctcgggccgc
     1741 ctcaccaccc accctccatc catggcggct ggagtagagc agcggggcct cgcccaggcg
     1801 accctcgccg aaggccacta cccgggcaaa gaaaaggtcg tggtcgtatc gaccgacgat
     1861 cctgtcctcg acctcgcaac ccagccacgc aagggcgtcg gggactaccg gccagccgtc
     1921 ggcgtcggcg atccactcgt cagccacgta ccgaaagcgg tgccccgggt agctgaagta
     1981 ctgcccgggt tcgacctggt cgccagccag gatggaaacc gcaaagcggc cggaaccgac
     2041 gatcaacgga taggtgtcgt gcttgggtga caccgacgcc atgaggacgg gttcgtcaaa
     2101 cgagacctgg cacacccagt gggaggtgta ggcccgggtg acgtcgttgt gggtggcggc
     2161 caccacctgg acgcccttca tcatctgacc aaggcaacgc ttcaagtctc ggtcgatcat
     2221 ggctccagtc tggctgccag tccgaccctg cccgggcacc tagcgtggcc cggtgcg
//
LOCUS       DASCMR010000013         2289 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000090783, whole genome shotgun sequence.
ACCESSION   DASCMR010000013 DASCMR010000000
VERSION     DASCMR010000013.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2289)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2289)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2289
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000090783"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1638)
                     /locus_tag="QGG16_00205"
     CDS             complement(<1..1638)
                     /locus_tag="QGG16_00205"
                     /inference="COORDINATES: protein motif:HMM:NF012906.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23729.1"
                     /translation="MVHRSMDAPGALPGPWRAIEADEMLRRDFPLEDLDDGDWPEVTV
                     PGAWRSTPAFADADGPLLYRTRFSTQPPDLDRRTFLELAGVTFQGDVWLDGSYLGPTE
                     GSFTPHLLEVTELVRARSDHLLAVEATCPPVGNPDEKRTLTGTTQGGRGIAPWNPGGI
                     GRPVRLRETGPVPLLHVRVVCTRATESVATLTFRAVVHTDRPRAAVFHTRVLGVDHRY
                     RQSLAGGENRVEWSIRIPRPPLWWPAEMGDQPLHDVELEVATEDGRVSDRVVRRTGFR
                     SVQMHNHVWSINGERIFLRGAIVPPLDRDLSRVTDDSAMADVALASNAGLNLLRLIGH
                     VSATELYDEADRAGMLVWQDLPLTGGYHRGVRGQAARQARDVVDLLGHHPSVIVWCGH
                     DAPDPVDRTRAVPRQMDQQLPTWNRTVLDRTVRRSLDQADPSRPVISHSGVLPNPPRV
                     DDATGHLWFGWYSGRRGDLAGYMDRVRRAGRFVSAFGAQSVPVDSPALNDGTLNPGSW
                     PIIDSDRLAGFGAEVDVLVRRVPPANWAGPEEWAADTR"
     gene            complement(1757..>2289)
                     /locus_tag="QGG16_00210"
     CDS             complement(1757..>2289)
                     /locus_tag="QGG16_00210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23730.1"
                     /translation="WLRALSDGEMAWPWRSPVDRPELANAFDLVGVVGDHPVALDGNG
                     TTWPYPAGARVDATGGAPLPEELGVALRRIHDRLDEQKLVVAGWGVSTTDDDWRNELL
                     RDVVAQVESAAVDGIPVVGLFHDALLDGYSTAGWGPVPGFAGPRGLVTRNRRLKESGR
                     WLSEHITGRPPAGSLS"
BASE COUNT          365 a          773 c          807 g          344 t
ORIGIN      
        1 acgggtatcg gccgcccatt cctcgggccc cgcccaattg gcagggggaa cgcggcgtac
       61 cagcacatcg acctcggctc cgaagccggc cagtcggtca gagtcgataa tgggccacga
      121 tccgggattc agcgtcccat cgtttagggc tggagaatcc accggtacgg actgggcacc
      181 gaaggccgat acgaatcgac cggcccgacg tacccggtcc atgtatccgg cgaggtctcc
      241 ccgccgtccg ctataccacc cgaaccagag gtggccggtc gcgtcgtcga cccgaggcgg
      301 gttgggcagc accccggagt ggctgatcac cgggcgagaa ggatcggcct gatcgagaga
      361 gcggcgaacc gtgcggtcca gcaccgttcg attccatgtg gggagctgct ggtccatctg
      421 gcgtggaacg gcccgggttc ggtccacggg atcgggggcg tcgtggccac accagacgat
      481 caccgacggg tggtggccca gtaggtcgac cacgtcgcgg gcctgacggg ccgcctggcc
      541 acggaccccc cggtggtagc cgccggtcag tggaaggtcc tgccacacca gcatcccggc
      601 ccggtcggct tcgtcgtaca gctcggtggc cgacacatgg ccgatcaggc ggagcagatt
      661 gagtccggcg ttgctggcca gtgccacgtc ggccatcgcc gagtcgtcgg tcactcgaga
      721 caggtctcgg tccagcggag ggacgatggc ccctcggagg aagatccgtt ccccgtttat
      781 cgaccacacg tggttgtgca tctggactga ccggaagccg gtgcgtcgca ccacccggtc
      841 actgacccga ccgtcttcgg tggccacctc gagctccacg tcgtgtagtg gctggtcgcc
      901 catttcggcg ggccaccaca atggtgggcg cggaatacgg atcgaccact cgacccggtt
      961 ttcgccgccg gccaacgact gacggtagcg gtggtcgacg cctaggaccc gggtgtggaa
     1021 caccgcggcc cggggccgat cggtgtggac cacggcgcga aacgtcaggg tggcgacgga
     1081 ctcggtggcg cgggtacaca ccacccggac gtgaagcagg gggaccggcc cggtctctcg
     1141 cagccgaacc gggcgtccga tcccaccggg gttccacggg gcgatgcccc ggccgccctg
     1201 ggtcgtcccg gtgagggtgc gtttctcgtc cgggttcccg accggtgggc aggtggcctc
     1261 cacggccagc aggtggtcgg agcgggcccg gactagttca gtcacttcga ggaggtgggg
     1321 ggtgaacgag ccttcggtgg ggccgaggta cgaaccgtcc aaccacacgt ccccctggaa
     1381 ggtgaccccg gctaactcca agaacgttcg ccgatctagg tccgggggtt gggtggaaaa
     1441 tcgggtgcgg taaaggagtg gcccgtcggc gtcggcgaag gccggggtgc ttcgccatgc
     1501 accgggcacc gtgacctcgg gccagtcacc gtcgtcgagg tcctcgaggg ggaaatcgcg
     1561 ccgcagcatt tcgtcggcct cgatagcccg ccatggtccg ggcagggccc cgggcgcgtc
     1621 catgctccga tgcaccatgt ccagacgcta cgcccggcag gatcctgatc aaggcgcgct
     1681 gcctatggtg ccgccatgct ccggcggtgg cggaaaggac gggtcccgag gaacctgctc
     1741 aggagcaagc cagccgctag gacagggagc cggccggtgg tcggccggtg atgtgctcgg
     1801 agagccagcg tccgctctcc ttgagccgtc gattcctggt cactagcccg cggggcccgg
     1861 caaagcccgg gaccggcccc cagcctgcgg tggagtaacc gtcgaggagc gcgtcgtgga
     1921 acaagcccac gaccggtatc ccgtcgaccg ccgccgactc aacctgggcg acgacgtcgc
     1981 gcagcaactc gttgcgccag tcatcgtcgg tcgtggacac gccccatccg gcgactacga
     2041 gtttctgctc atcgagccgg tcgtggatcc tccggagggc cacgccgagt tcctcgggga
     2101 ggggcgctcc accggtggcg tcgacccggg cacctgccgg gtagggccac gtagtcccgt
     2161 tgccatccag ggcgaccgga tggtccccga ccacgcccac caggtcgaag gcgttggcca
     2221 actccggccg gtccactgga gagcgccaag gccaggccat ctcaccgtcg ctcagggccc
     2281 gcagccacg
//
LOCUS       DASCMR010000014         2240 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000099653, whole genome shotgun sequence.
ACCESSION   DASCMR010000014 DASCMR010000000
VERSION     DASCMR010000014.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2240)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2240)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2240
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000099653"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..814
                     /locus_tag="QGG16_00215"
     CDS             <1..814
                     /locus_tag="QGG16_00215"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HJP23731.1"
                     /translation="EPIVLLHGEPTWGYLYRHMIGPLSEHYRVVVPDHMGFGKSETPQ
                     GRDYTLQAHTENLVALVEHLDLTGITFFGQDWGGPIATAFTVRHPERVKRMVYANSLA
                     GYGRLGDEDATPMSQSRWFNWIGGGLESGRTADVLLNLGSTVLSVMKITGFTNSAAVD
                     DTWIRAYSDPFPDRASAIGGLEFPLDAYLGRIAEYVIAGAEGVPDLVSKPAILLEGME
                     DGAIPPDRAIADFRALWPDAPVVELPGVGHYCQEDAPNALVAQVKDFLQANP"
     gene            complement(827..1795)
                     /locus_tag="QGG16_00220"
     CDS             complement(827..1795)
                     /locus_tag="QGG16_00220"
                     /inference="COORDINATES: protein motif:HMM:NF025587.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase family protein"
                     /protein_id="HJP23732.1"
                     /translation="MRGASAPDVPVVDLVDGSGVADALSTVGFVAVREHGVPQACLLG
                     MRELMVDLFAVDEDTKVQQAITRENYRGFIPLRFFTPNRDSGAGDDTHLADAFEGYKL
                     HWECPPGHPVSDECDLYGPNRWPDHPTRMPKVVASWWAAMEGLVDRLLDVLADEMGLD
                     RSVLAEAMETPLTNTTLLHYPARSPDDLAPGFHPHKDITVVTVLDPNPVGGLEVRTRD
                     GRWVEAGCPEGALLVNVGDVLEVWSGGRLISTPHRVDISGGAERYSAPFFAVPNHRVV
                     AEPMIEPVDGFETRSIPMGYVQAEVWRTNWPDEEAADTHSHLGGVD"
     gene            complement(1795..>2240)
                     /locus_tag="QGG16_00225"
     CDS             complement(1795..>2240)
                     /locus_tag="QGG16_00225"
                     /inference="COORDINATES: protein motif:HMM:NF012766.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HJP23733.1"
                     /translation="LLMFDTGSVFDGYSSDFDRYVAFGRADEDAKRAYRTVWEATEAG
                     LATAKPGATTSDLWRAMAEVLDAGGSLGNSVGRLGHGLGMQVTEWPSHTAEDGTVLEE
                     GMVLTLEPGLTWASGRMMVHEENLVLRADGPEMLSRRAPAELPII"
BASE COUNT          398 a          739 c          682 g          421 t
ORIGIN      
        1 cgagccgatc gtgctgcttc acggtgagcc gacctggggc tacctctatc gacacatgat
       61 cggtccacta tcggagcact accgggtagt cgtccccgac cacatgggct tcggcaagtc
      121 cgaaacccca cagggccgcg actacacgct ccaggcccat accgagaacc tggtcgcgct
      181 ggtggagcac ctcgacctaa caggcatcac gttcttcggc caggactggg gtggtccaat
      241 cgccaccgca ttcacggtgc gccaccccga gcgggtcaag cggatggtgt acgcaaattc
      301 gctggctggc tacgggcggc ttggcgatga agacgcgacc ccgatgtccc agtcgcgttg
      361 gttcaattgg atcggcggtg gtttggaatc aggccgaacc gccgacgttc tgttgaacct
      421 aggttcgaca gtgctgtcgg tcatgaagat cacggggttc acaaactcgg ctgctgtgga
      481 cgacacttgg atccgggcct attcggaccc cttccctgac cgggcgtctg ccattggcgg
      541 gctggagttc cccctggatg cctatttggg ccggatcgcc gaatacgtca tcgcaggggc
      601 tgaaggagtg ccagacctgg tgtccaaacc ggcgatcctg ctcgaaggca tggaggacgg
      661 ggcaatccca cccgaccggg cgattgccga ctttcgggcg ttgtggcccg acgctccggt
      721 agtcgagtta ccaggcgtgg gccactactg ccaggaggac gcccccaacg ccctggtggc
      781 ccaggtcaag gacttcctcc aggcaaaccc ctagggttcc gcccgtttag tcgacgccgc
      841 ctaggtggct atgagtgtca gcagcctcct cgtcgggcca gttggtgcgc cacacctccg
      901 cctgtacgta gcccattgga atcgatcggg tctcaaagcc atccactggc tcgatcattg
      961 gctcggccac cacccggtgg tttggcaccg cgaagaacgg ggcgctgtac cgctcggccc
     1021 caccggagat gtccacccgg tgaggtgtgg aaatcaggcg gccacctgac cagacctcca
     1081 atacgtcccc tacgttgacc aggagtgccc cctcagggca cccggcttca acccatcgac
     1141 cgtcacgggt ccgcacctcg aggcctccta ccggattggg atcaagcacg gtgaccacgg
     1201 tgatgtcctt gtggggatga aacccaggcg ccagatcgtc ggggctccgg gccgggtagt
     1261 ggagcagggt cgtgttggtc agtggcgtct ccatggcctc ggccagcacg gatcgatcca
     1321 ggcccatctc gtcggccagc acatctagga gccggtctac gaggccttcc atcgcagccc
     1381 accaggacgc caccactttc ggcattctcg tcggatggtc aggccatcgg ttcggcccgt
     1441 aaagatcgca ctcgtcgctg acagggtgtc ccggcgggca ctcccagtga agcttgtagc
     1501 cctcaaaggc gtcggctaga tgagtgtcgt ctccggcgcc cgaatctcgg ttcggggtga
     1561 agaagcgcag cgggatgaag ccccggtaat tctcccgggt gatggcctgt tgaaccttgg
     1621 tgtcctcgtc cactgcgaac aggtcgacca tgagttcgcg cattcccaac aggcaggctt
     1681 gtggcacccc gtgttcgcgt acagccacaa atccgaccgt cgatagtgcg tctgccacgc
     1741 cggatccgtc aactaggtcg actaccggta cgtcaggggc cgaagctccc ctcattagat
     1801 gatcggcaac tcggccggtg cccgacggga caacatctcg ggtccgtcgg cccgaaggac
     1861 caggttctct tcgtggacca tcatccgacc ggacgcccat gtgagacctg gttcgagggt
     1921 tagaaccatc ccttcctcca gcactgtccc atcctccgcg gtgtgcgagg gccactccgt
     1981 gacctgcatg cctagtccgt ggcctagtcg ccccaccgag ttgccgagcg accctccagc
     2041 gtcgaggact tcagccatgg cccgccacaa gtcactggtg gtagctccag gcttggccgt
     2101 ggccaatcca gcctcagtgg cctcccacac tgtccggtag gcccgttttg cgtcctcgtc
     2161 ggcccgtccg aaggccacgt agcggtcaaa gtcgctggag tagccgtcaa agaccgatcc
     2221 ggtgtcgaac atcagcaggt
//
LOCUS       DASCMR010000015         5728 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000114797, whole genome shotgun sequence.
ACCESSION   DASCMR010000015 DASCMR010000000
VERSION     DASCMR010000015.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5728)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5728)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5728
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000114797"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..246
                     /locus_tag="QGG16_00230"
     CDS             <1..246
                     /locus_tag="QGG16_00230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23734.1"
                     /translation="GSCDDSGTNHYSGSCDDSGTNHYSGSCDDSGTNHYSGSNHYSGT
                     NHNGGTYDYSGSCDDSGTNHNSGSYDDSGTKGRTACT"
     gene            311..1438
                     /locus_tag="QGG16_00235"
     CDS             311..1438
                     /locus_tag="QGG16_00235"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012371.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HJP23735.1"
                     /translation="MDSEFTAMGTYKSGMAVAVFTDGFLWTYAVGDASATTPMTTSTP
                     TLIRSTSKTFLAALILDLVEDGHFQLTDSLESVLSADPDYSLLDPTTINGAVTVHELL
                     SMRSGIRPFAAGAGEENNLDLLWVVKKPSWKPVDTVGLIKDPWVEPGEYEYSDSNNFL
                     LGMVAELHTGKDLSVLYRERFLDPLDIAAVLLPDEPVPEGTARPYTDLDYWGGSGFGD
                     MIELDRTRYGNTADDWYEQDARLAWATAGIVSTPANIARWGYELYSGNGSALADQSRS
                     VLLNSINEETISLAGQPQQYGYYVGRRTFPLEDGTLLSVLGHPGGGAGYTSRVYYSSR
                     FDMSISILANSTVRYARREGGCSEYGAVDCIAWELFKSYAD"
     gene            2010..2282
                     /locus_tag="QGG16_00240"
     CDS             2010..2282
                     /locus_tag="QGG16_00240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23736.1"
                     /translation="MQAAETTEEGDALLAELFGVLAANGGEMVLSGQDLARGVNVSVT
                     KYEDSAAAVKTQIEISAKGLLEFVSAGPFVALDEWWPIASAAINDN"
     gene            complement(2406..2759)
                     /locus_tag="QGG16_00245"
     CDS             complement(2406..2759)
                     /locus_tag="QGG16_00245"
                     /EC_number="1.14.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HJP23737.1"
                     /translation="MNDKHGATEFGLVSEVPYYATIFTTRMTSNLDGYEETADRMAEL
                     VNAREGFLGMQSARGDDGLGITVCYWRTEEDIAAWRNDLEHEIAQDEGRNRWYAQYTV
                     EVARVDRTIGFKRPS"
     gene            2917..3603
                     /locus_tag="QGG16_00250"
     CDS             2917..3603
                     /locus_tag="QGG16_00250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23738.1"
                     /translation="MPAPVDDDPRGPGQEPLEYGALASRFEVIREAADRSPDSLVPRS
                     IMRGIAAGLSRAPGIRRTDPLKSHQQRSLWARLVDEATARPEHVGFVLLGVGGIRELA
                     ERLGVPHKTLATRLDSWRRTRPRMVVTFTGRRVRGSTPLHAVQIPVASDLVLWAATTR
                     AAVDEVDGRPPHPLLVADAAERLAMLGTTGPAFGTWPDLDDAVEDLGKAIARRGSEAP
                     RRRLETGRHR"
     gene            3690..5555
                     /gene="typA"
                     /locus_tag="QGG16_00255"
     CDS             3690..5555
                     /gene="typA"
                     /locus_tag="QGG16_00255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HJP23739.1"
                     /translation="MAKSQTSDPARTGSRPDLRNVAVIAHVDHGKTTLVDALLRQSGA
                     FRDNEEIAERVMDSMDLEREKGITILAKNTAVVRDGVKINIVDTPGHADFGGEVERAL
                     NMVDGVILLVDSAEGPRPQTRFVLRKALEAGLAIVLVINKVDRPDARLDEVVDETYEL
                     FLDLDATEDQIEFPIVYTDARAGTATLDPSVPGADLSPFFDVVLEHVPPPSFDETAPL
                     RVHVTNLDASPYLGRIAICRIDSGTLKRGAPVAWCRTDGTIQPAKIGTVTVTDALGQV
                     DVEEAGPGEIVYVSGIVDVTIGETLADLDDPRPLPGITVDEPTLSMAIGVNTSPVAGS
                     DGTKLTARQVKDRLDAELVGNVSLRVMPTERPDTWEVQGRGELQLAILVETMRREGFE
                     LTVGKPAVLLREIDDTLHEPTERLSVDVPEEYVGAVTQLLGERRARMGDMTNHGTGWV
                     RLDYVVAARALIGFRTEFMTETRGTGLLHHVFEGWEPWMGDLRIRQTGSVVADRIGSA
                     TAYAITGIQERASMFIGPTEEVYAGMIVGENPRAEDMDVNICREKKLTNVRASASDDT
                     IRLTPPRRLSLEQALEYIADDECVEVMPGVVRLRKVELDATARARTVKRLKNARA"
     gene            5578..>5728
                     /locus_tag="QGG16_00260"
     CDS             5578..>5728
                     /locus_tag="QGG16_00260"
                     /inference="COORDINATES: protein motif:HMM:NF021510.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2237 family protein"
                     /protein_id="HJP23740.1"
                     /translation="MAVNVLGTPLQECGVDPLTGFYRDGCCNTGTDDLGVHTVCALMT
                     EEFLAF"
BASE COUNT         1122 a         1841 c         1690 g         1075 t
ORIGIN      
        1 ggctcctgcg acgacagcgg caccaaccac tacagcggct cctgcgacga cagcggcacc
       61 aaccactaca gcggctcctg cgacgacagc ggcaccaacc actacagcgg ctccaaccac
      121 tacagcggca ccaaccacaa cggtggcacc tacgactaca gcggctcctg cgacgacagc
      181 ggcaccaacc acaacagcgg ctcctacgac gacagcggca ccaaaggtcg tactgcctgc
      241 acctgacttt gaagcaccaa caaacttcgg cgcgtttaac aaccagaccc aagatggatt
      301 caaggcagtc gtggacagcg agttcacggc catgggcacc tacaagtctg gtatggcagt
      361 cgccgtcttc accgatggat tcctgtggac atacgcggtc ggagacgctt cggcaacgac
      421 gccgatgacg actagtacgc cgacacttat ccgtagcacc tctaagacat ttctggctgc
      481 gctgatcctt gatctagtcg aggacggcca cttccaactc actgactctc tcgaatcggt
      541 cctgtcagcc gatcctgact attcgttgct cgacccaacg acgatcaacg gcgccgtaac
      601 tgtccacgaa ctcttgagca tgcgttcagg tattcgtccc ttcgcagcgg gagcaggcga
      661 agagaacaac ctggatttgc tctgggtcgt caagaaaccg tcgtggaagc cagtggacac
      721 agttggtcta ataaaggacc catgggttga acccggggag tacgagtact ccgattcgaa
      781 caactttctc cttggaatgg tcgctgagct acacaccgga aaggatctct ctgtcctcta
      841 ccgagaacga ttcctcgatc cgctcgacat tgctgccgta ctgctccccg atgaaccagt
      901 tcccgaaggc acggcacgcc catacacgga ccttgattac tgggggggaa gtgggttcgg
      961 cgacatgatc gagttggaca ggacccggta cgggaacacg gctgacgact ggtacgaaca
     1021 agatgcacgg ctggcttggg ctacagcggg aatcgtgtcg accccggcca acattgctcg
     1081 ctggggctac gagctttata gcggcaacgg ttccgcactc gcggaccaga gccggtcggt
     1141 tctcctcaac tcgatcaacg aagaaaccat ctcgcttgct gggcaaccgc agcagtacgg
     1201 ctactacgtg gggagacgaa ccttcccact cgaagacgga acattgttat cggttcttgg
     1261 gcatcccgga ggaggagcgg gctacacctc gcgggtctac tactcgtccc gcttcgatat
     1321 gtcgatctca atcctggcga attcaaccgt ccgatacgcc agacgcgaag gaggctgcag
     1381 cgagtacggc gcagtggatt gcatcgcttg ggaacttttc aagtcctacg ccgattaggt
     1441 cgggccgcag gctggtatcc actgtggcat aacgcctgcg cgtgtctacg cctgggaggt
     1501 ctgatgtcgt atcccacccc tcagggaggg gtgggatact caatcagaag tgcaccgggc
     1561 tattacctct gcgagccgat ccgagaactc gcccgtgaga aacgagcgcc tctcctcgta
     1621 aagaaactcg tcctgagaca actttccttc gatgcagttg agcatcttct cgcaagaaga
     1681 cgcatcagcc tcgctttggc aactgactag gaagttgttg cgaatttctt cgtcgtagtc
     1741 gctgccgtca acgctgcagc taatcgatga tgtcgccaga agcaggacta atccaagaat
     1801 tcgcaccagg ccagtatgta ctggcggcga tctaggtgaa cgtgacggtc gtgcatatct
     1861 actcctaggg gattcgtacc tagggccacc cccctaagga tggggttcac cagcgtcagc
     1921 atttgatctg tgggaccctt atccgctcac atacgaaaag gggaaccatg tcctatacga
     1981 gcattaccac tacgaggccc gggccacgga tgcaggcggc agagaccacc gaggaaggtg
     2041 acgccttgtt ggctgaactc tttggggttc ttgctgccaa tggcggtgaa atggtcctat
     2101 ctggtcagga cctagctcgc ggcgtcaacg tatcggttac aaaatatgag gattcggctg
     2161 cagcggtgaa gacccagatc gagatctcag cgaaaggctt gctggagttc gtttccgctg
     2221 ggccgttcgt agcccttgat gagtggtggc cgattgcgtc agccgcaatc aacgacaact
     2281 agaaccctgt cgctcggagc ccgtcccttg gggcggggtc cgagcactca gactgtctgc
     2341 gcatatccgc acctgcgggc ttcgatgccg cctcccgccc gctgtagcgg agggttcgac
     2401 aagctctagc tagggcgctt gaatccaata gtccgatcta cccgcgccac ctcgaccgtg
     2461 tactgggcgt accagcgatt acggccttcg tcctgggcaa tctcatgttc caggtcgttt
     2521 cgccaggcgg cgatgtcctc ttcggtacgc cagtagcaca cggtgattcc gaggccgtcg
     2581 tctccccgag ccgattgcat gcctaaaaag ccctcacggg cgttgactag ttcggccatg
     2641 cggtcagccg tctcttcata tccgtcaaga ttgcttgtca tacgagtagt gaagattgtg
     2701 gcgtaatacg gaacctcact gaccagaccg aattcggtcg ccccatgttt gtcgttcatg
     2761 acgaaaccat atttcgacaa tgccccggac tgcgcgtacc tacaccgagg gtgtcagaga
     2821 cgccctcgga cagcagcacc gagttaacac cacagtctcc agcccgaccc tcgtcgcgtt
     2881 ccgtctttcg accttgttgg gactaccgtt tacgacgtgc ccgcgcctgt tgacgacgat
     2941 ccccggggtc ccgggcagga accactcgaa tacggcgccc tggcttcccg gttcgaggta
     3001 atccgtgaag ctgccgatcg gtcacccgac tcgctggtgc cgcggtcgat catgcgggga
     3061 atcgccgccg gcctctcacg ggcgcccggc atccgacgga ccgatcccct caagagtcac
     3121 cagcagcgat cactctgggc tcgactcgtt gatgaggcca cggcacggcc cgaacatgtt
     3181 gggtttgtcc tcctcggagt cggcggcatc cgagagctgg ccgaacggct cggcgtgccc
     3241 cacaagacct tggccacccg tctcgattcg tggcgccgga cacgcccccg gatggtggtg
     3301 accttcaccg ggcgccgtgt ccggggaagc accccgctgc acgccgtcca gatacctgtg
     3361 gcgtccgacc tcgtgctgtg ggcggccacc acccgggcgg cggtggacga ggtggacgga
     3421 cgccctcccc acccgctgct ggtcgccgat gccgctgagc gcctcgccat gctgggtact
     3481 accgggccgg cctttgggac gtggcccgat ttggacgacg cagtagaaga tctcgggaag
     3541 gccattgctc gccggggaag cgaggcgccc cgtcggcgcc tggagaccgg ccgccaccgc
     3601 tgaccggcac agatcagcgg attctgctgg ttgcgcccat cggtcacacc tccgtctacg
     3661 gaggctcgcc gggccgtaac cttttcgtcg tggctaaatc tcagacctcc gacccggcgc
     3721 gcacgggaag ccgtcccgac ctacgcaacg tcgccgtcat cgcgcacgtc gaccacggca
     3781 aaacaaccct cgttgatgcc ttgttgcgcc agtccggtgc cttccgggac aacgaggaga
     3841 tcgccgagcg tgtcatggac tccatggatc tcgagcgtga gaagggcatc acgatcctgg
     3901 ccaagaacac ggccgttgtc cgtgacggcg taaagatcaa catcgtcgac actcccggtc
     3961 acgcggactt cggcggcgag gtcgagcggg cactgaacat ggtcgatggc gtgatcctgc
     4021 tcgtcgactc cgcagagggc ccacgccccc agacccggtt cgtgcttcgt aaggcactcg
     4081 aagccggtct ggccatcgtg ctcgtcatca acaaggtcga ccggcccgac gcccgccttg
     4141 acgaggtggt cgatgagacc tacgagttgt tcctggacct cgacgccacc gaagaccaga
     4201 tcgagttccc gattgtctac accgatgccc gggccggtac cgcaaccctg gatccgtctg
     4261 tccccggtgc agatctcagc ccgttcttcg acgtggtgct cgagcacgtg ccgccgcctt
     4321 cgttcgacga gacagccccg ctacgggtcc acgtcaccaa cctcgacgcc tcgccgtatc
     4381 taggtcgcat cgccatctgt cgaatcgaca gcggcaccct caagcgaggt gccccggtgg
     4441 catggtgccg caccgacggc accatccagc cggccaagat cggcaccgtc accgtcaccg
     4501 acgccctcgg acaggtcgac gtggaggagg ccggaccggg tgagattgtc tatgtgtcgg
     4561 gcatcgtcga tgtcaccatc ggtgagaccc tggctgacct ggatgatccc cgtcctcttc
     4621 ccggtatcac cgtcgatgag cccacgctgt cgatggccat tggagtgaac acctcaccgg
     4681 tggccggatc ggacggcacc aaactcaccg cccgccaggt caaggaccgt ctcgacgctg
     4741 aactggtcgg caacgtgtcg ctacgggtga tgcccaccga gcgtcctgac acctgggagg
     4801 tccagggtcg tggcgaactc cagttggcca tcttggtcga gacaatgcgc cgcgaaggct
     4861 ttgaactcac cgtgggtaag ccagctgtgc tgttgcgtga gatcgacgac accttgcacg
     4921 agcccaccga gcgcctctca gtggacgtcc ccgaggagta cgtgggtgcc gtcacccaac
     4981 tactcggcga gcgccgggcc cgcatggggg acatgaccaa ccacggcacc ggttgggtcc
     5041 gtctcgacta cgtggtggct gcccgtgcac tgatcggttt ccggaccgaa ttcatgaccg
     5101 aaacccgggg taccggcctt ctgcaccacg tgttcgaagg ttgggagccg tggatgggtg
     5161 acctgcgaat ccgccagaca ggcagcgtgg tggccgaccg catcggtagt gccacggcgt
     5221 acgccatcac cggcatccag gaacgggctt cgatgttcat cggccccacc gaggaggtgt
     5281 acgccgggat gatcgtcggc gagaaccccc gggccgagga catggacgtc aacatctgca
     5341 gagaaaagaa gctcaccaac gtgcgggcct cggcatctga cgacacgatc cgcctaacac
     5401 cgccgcggcg actctccctc gagcaggcgt tggagtacat cgctgacgac gagtgcgtcg
     5461 aggtgatgcc gggcgtggtg cgtctccgca aggtcgaact cgacgccacc gctcgcgccc
     5521 ggaccgtcaa gcgcctcaag aacgctcgag cctgacggtc ctctggggct tcgaccgatg
     5581 gccgtcaacg tgctgggaac gccgctccag gaatgcggtg ttgaccccct gaccggtttc
     5641 taccgggatg gttgctgcaa caccggaact gacgacctcg gcgtgcacac cgtgtgcgct
     5701 ctgatgaccg aggagtttct ggccttct
//
LOCUS       DASCMR010000016         5757 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000114950, whole genome shotgun sequence.
ACCESSION   DASCMR010000016 DASCMR010000000
VERSION     DASCMR010000016.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5757)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5757)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5757
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000114950"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..343)
                     /locus_tag="QGG16_00265"
     CDS             complement(<1..343)
                     /locus_tag="QGG16_00265"
                     /inference="COORDINATES: protein motif:HMM:NF015297.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HJP23741.1"
                     /translation="MAPGSGSSTQLVLRSLLFAPGNRAEVLTKLPRSAPSGAVIDLED
                     AVPSDRKAEARAIAHQVAPQLVAEVRLFVRINAADTGHFAVDVSDGLPVGLTGVVVPK
                     IESVAAVDAVAA"
     gene            complement(398..3799)
                     /locus_tag="QGG16_00270"
     CDS             complement(398..3799)
                     /locus_tag="QGG16_00270"
                     /inference="COORDINATES: protein motif:HMM:NF012789.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HJP23742.1"
                     /translation="MTGSTPGDQADRDRIGHSLNENLFVEAGAGTGKTTALVGRMIAL
                     VVDEGVAVEKIAAITFTERAAAELGDRFRRGLEDVSRHDADPIRRQHAEAALADVDLA
                     SLSTLHGFARRLLTEHPLEAGLPTGFELLDEVSSQLGFDDRWDDLQRTLLGDDALART
                     ILLADALGVHPSHLRDLARELDDRWDLLDPLTSPAEPPPVNVTAIINLMDQATVLDHH
                     DLDEDDNLRRRLAGIRVARDALTGAVDEIDMVRILSTGDFRKSLNVGNSGRKGDWGDD
                     KDTIREFAYEARDLWDEIVRSTAGGVLARILVELVDATLRAADERRRSGSLTFHDLLV
                     IAHDLLSDPASGPAVRTTLHERYRYVLLDEFQDTDPVQLKLALLLTDPDAAPDAELDG
                     FSPVSGSLFLVGDPKQSIYRFRRADISLYLLARRSLDASAVSLTENFRTTVPIIDWIN
                     AIFGQLIGPGPSSDGPAPEDEPVRAELVQPGYTPLVGCRPAATVGPAVTVLGRDAQGD
                     DIDAAGLRKLEADAVADAITTAVVEGWTVEDRAGHQRPCGFGDVAILLPTRTSLPDLE
                     ISLEAAGIPYRAESSSLLFATPQVRDLLMVMRAIDDPTDDLAVVAALRTSHFGCGDDD
                     LARWRVHHGGSWNHQSDQPEGDQSVELVASGLVWLGQMHRCRHLLGPSGILERLVDER
                     RVLQVAFGETRPRDVWRRVRLLSDRARAFAEAGGSSLRGFVDWCLAQADEKGRVAETV
                     LSEIDDAAVRILTIHGAKGLEFPITILSGMSTANARSDRGVQLLIDPDRSIEIGIREG
                     VETPGFQATHAVDRRFQDAEAIRLLYVATTRARDHLIVSVYRATDIDDEKPGRPGPGR
                     LLARALEGAGGDAHGSDLSSTTGALPGRAVPSGRALPDRQTWLTEHDHALDRAGRPST
                     VSATAIAGHVATLATEQATEQATANHDEDRARPGEVGRHGTGIGRAVHGALELLDFDT
                     TDPTSVVRERSVAEGVLGDLRTVDALVRSGLTADVVRLAAGARHWRELYVAAPVDDDP
                     DAPVIEGYIDLAVLDDGPEGPGLVIVDYKTDAVADADALAAKAERYRLQGATYALAAE
                     RSTGLPVRRVVLCFLATDGTTEVDVTNLAGAMLEVRATARELVGV"
     gene            complement(3796..>5757)
                     /locus_tag="QGG16_00275"
     CDS             complement(3796..>5757)
                     /locus_tag="QGG16_00275"
                     /inference="COORDINATES: protein motif:HMM:NF024117.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HJP23743.1"
                     /translation="VDDEGRTWLADRLSAEATRARQLAAFVERLCASLHGLTEDDSWA
                     GRCRRVRDLLRQYLGGTTAHESWSAHELLALDEVGAILDALSELDNIEPHPPYRSFRG
                     ALAAELGRPIGRAGRSGIGVQVTGIDQAVGLDADLVIVVGLAEGSMPTRPPADPLLSD
                     DHRTAARTGLPTRHEHAARQHHAFLAALTGAAERIVLVQPRGDLRRSGDRPMSRLLLA
                     EFEELAGHRPESDDLDLFVAPWFDHVASFTDALDRDDPATVQEYDLATAIRGGRPAVD
                     KLRCDDVVVDRGIELLGQRADKDFTRFDGNLSGVTLPVLDGELSATRLEKWVDCPFAF
                     FAEYVLGVRPLEDPSERTGLSPLIRGSIVHRVLDRLVTDGLANGSLPGHGDPWTAAQR
                     AHAAELLNEECAHAEARGEAAHPRFWPTICDRLAADLDDFLVLDSAFRARFDSRPVAA
                     ERRFGGPDALVITLANGRTLRFRGSIDRVDLTADDHLVVVDAKTGRPDRYKNIPVDYF
                     PGGSFLQLPIYALAAAAKGSTTRHATYAFLGEVADDFHHLGYEVDDEVVAAFQRVLSS
                     IVRGIEGGAFPHHPPESDRPEAHRCLHCSPDGLDARRVRSARARKANHPVLALHEDHI
                     TTNFLDAGTETPEDDHETEHVDQEEEVDR"
BASE COUNT          913 a         1718 c         2189 g          937 t
ORIGIN      
        1 cagcggctac ggcatcgacg gcggctaccg attcgatttt ggggacgacc acaccggtga
       61 ggccgacggg cagcccatcg gacacgtcga ctgcgaaatg gccggtgtcg gcggcgttga
      121 ttcgcacgaa caggcggacc tcggcgacta gttggggggc gacctgatgg gcgatggcac
      181 gggcttcggc cttgcggtcg gagggaacgg catcctcgag gtcgatgacc gccccgcttg
      241 gtgctgaccg ggggagcttg gtcagcacct cggcccggtt gccgggggca aacagcaggc
      301 tgcggaggac gagctgtgtc gacgagccgg atccgggggc catgggctcg acgctaccga
      361 ccggcccgga ccgggacctg atcggagtgg gattgggtca gacgccgacc aactcgcggg
      421 cggtggcacg cacctcgagc atcgctccag ccaggttggt gacgtcgacc tccgtggtgc
      481 cgtcggtggc caggaagcag agcacgaccc gccggaccgg aaggccggtc gaccgctcgg
      541 cggccagagc gtaggtggcg ccctgcaagc ggtatcgctc ggctttggca gccagggcgt
      601 cggcgtcagc caccgcgtcg gtcttgtagt cgacgatgac gaggccggga ccctcagggc
      661 cgtcatcgag gacggccagg tcgatgtagc cctcgatcac cggggcatcg gggtcgtcgt
      721 cgactggcgc ggccacgtag agctcgcgcc agtggcgagc cccggcagcc aaccggacca
      781 cgtcggcggt cagaccggag cggaccaggg cgtctacggt tcgcagatcc ccgaggaccc
      841 cttcggcgac ggaccgttcc cggaccaccg atgtgggatc ggtggtgtcg aagtcgagga
      901 gctctagggc tccgtgcacg gcccgtccga tgccggttcc gtggcgtccc acctcacctg
      961 gccgggcccg gtcttcgtcg tggttcgctg tggcctgttc agtggcctgt tcagtggcca
     1021 gggtggcgac atgtccggcg atagcggtgg ccgacaccgt gctgggtcgt ccggcgcgat
     1081 ccagggcgtg gtcgtgctct gtgagccacg tctggcgatc ggggagggcg cggcccgagg
     1141 ggacagccct gccgggaagt gcgccggtgg tggaggatag gtcggagccg tgggcgtcac
     1201 cgccggcgcc ttcgagcgcc ctggcgagga ggcgtcccgg cccgggccga ccgggctttt
     1261 cgtcatcgat gtctgtggcc cggtaaaccg acacgatgag gtggtctcgg gcccgagtgg
     1321 tggccacata taggagtcgg atggcctcgg catcctgaaa ccggcggtcg acagcgtggg
     1381 tggcctgaaa tccgggcgtc tcgacacctt cccggatgcc gatctcgatg gaccggtcgg
     1441 ggtcgatgag tagttgaacc ccccggtcgg atctcgcgtt ggcagtcgac atgcctgaga
     1501 ggatggtgat ggggaactcc aggcccttgg cgccatggat ggtcaggatc cggacggcgg
     1561 catcgtcgat ttcggagagg acggtttcgg cgacccggcc cttctcgtcg gcttgggcga
     1621 gacaccagtc aacgaaaccg cgcaacgagc tcccgccggc ctctgcgaag gcccgggcgc
     1681 ggtcagacag gaggcggacc cggcgccaga cgtcgcgggg ccgggtctcc ccaaaggcca
     1741 cctgcagtac acggcgctcg tcgactaggc gttccagaat cccggatggt ccaaggaggt
     1801 ggcggcatcg gtgcatctgg cccagccaga cgagaccgga ggccacgagc tcgaccgact
     1861 ggtcgccttc cggctggtcg gactggtggt tccaggaacc gccatggtgc acccgccagc
     1921 gggcgaggtc gtcgtctccg cagccgaaat gggacgtgcg gagtgccgcc acgacggcca
     1981 ggtcatcagt ggggtcgtcg atggcccgca tcaccattag caggtcccgg acctgaggcg
     2041 tggcgaagag cagggagctg gattcggccc gataggggat gccggcggct tccagcgaaa
     2101 tctccaggtc gggcagtgaa gttcgtgtgg ggaggaggat ggcgacgtca ccgaagccac
     2161 atgggcgctg gtggccggca cggtcctcga ccgtccatcc ctcgaccaca gcggtggtga
     2221 tggcgtcggc cacggcatcg gcttcgagtt tccgtagacc ggcggcatcg atgtcgtcgc
     2281 cttgggcgtc ccttccgaga acggtcactg ctggcccgac tgtcgccgct gggcgacagc
     2341 cgaccagcgg ggtgtacccg ggctgtacca gttcggctcg caccggctcg tcctccggcg
     2401 cggggccgtc ggacgatggg ccgggtccga tgagctggcc gaagatggca ttgatccagt
     2461 cgatgatcgg cacggtggtt cggaagttct cggtcagcga cacggcggag gcgtccagcg
     2521 agcgcctggc cagcaggtag agggagatgt cggcccgccg gaaccggtaa atggactgct
     2581 tggggtcacc gaccaggaac agggatcccg atacggggga gaagccatcg agctcagcgt
     2641 cgggtgcagc gtcgggatcg gtcagcaaca gggccaactt gagctgtacg gggtcggtgt
     2701 cctggaattc atcgagcagg acgtaccggt aacgctcgtg cagtgtggtc cggactgccg
     2761 gccccgaggc gggatcggac agcagatcgt gggcgatgac cagtaggtcg tggaaggtca
     2821 gagagcccga tcgacggcgt tcgtcggccg cccggagggt ggcgtcaacc aactcgacga
     2881 ggattcgagc gagcacgccg ccggctgtcg atcgtacgat ctcatcccag aggtcgcggg
     2941 cctcgtatgc gaactcccgg atggtgtcct tgtcgtcacc ccagtcaccc ttgcggcccg
     3001 aattgccgac attgagtgac tttcggaagt cgccggtgga gaggatccga accatgtcga
     3061 tctcgtcgac ggcaccggtc agggcgtccc gggcgacacg gatcccggcc aggcgacgtc
     3121 ggaggttgtc atcctcgtcg aggtcgtggt gatcgaggac tgtggcctga tccatgaggt
     3181 tgatgatggc cgtgacgttc actggcgggg gttcggctgg tgaggtcagg ggatcgagga
     3241 ggtcccagcg gtcatctagt tcgcgggcca ggtctcgaag gtgggagggg tggacgccga
     3301 gggcgtcggc caggaggatg gtccgggcga gtgcatcgtc accgaggagg gtgcgttgga
     3361 ggtcatccca ccggtcgtcg aagccgagtt ggctcgagac ttcgtccagc agctcgaatc
     3421 ctgtcggtag gccggcctcg agcggatgct cggtcaggag gcgccgggcg aagccgtgga
     3481 gtgtggacaa cgaggcgagg tcgacatcgg cgagggcggc ttcggcatgc tggcgacgga
     3541 tggggtcagc gtcgtggcgg gacacgtcct cgagtccgcg gcggaagcgg tcgccgagct
     3601 cggcggccgc ccgttcggtg aatgtgatgg cggcgatctt ctcgacggcg acaccctcgt
     3661 cgaccacgag ggcaatcatc cgcccgacca gtgctgttgt cttgcccgtc ccggcacccg
     3721 cctccacgaa aaggttttcg ttaagcgagt ggccgatccg gtcgcgatca gcctggtcgc
     3781 cgggtgttga gccggtcatc ggtcgacctc ctcctcttgg tccacatgtt cggtttcgtg
     3841 gtcgtcttca ggggtctccg tcccggcatc gagaaagttg gtggtgatgt gatcctcgtg
     3901 gagggccagc accggatggt tggccttgcg ggcccgggcg gagcggacgc gtcgagcatc
     3961 gaggccgtcg ggggagcagt gaagacaccg gtgggcttcc ggccggtcgc tttctggtgg
     4021 gtggtgcggg aaggccccgc cctcgatacc ccggacgatg gaggagagca cccgttggaa
     4081 ggcggcgacc acctcgtcgt cgacctcgta tcccagatga tggaaatcgt cggccacctc
     4141 gccgaggaag gcgtaggtgg cgtgcctcgt ggtggagcct ttggcggcgg cggctagcgc
     4201 gtagatgggg agctgcagga acgatcctcc ggggaagtag tcgacgggga tgttcttgta
     4261 ccggtccggc cgtccggttt tggcatcgac cacgacgagg tggtcgtcgg cggtcaggtc
     4321 cacgcggtcg atcgagcctc ggaatcgcag ggtgcgaccg ttggcgaggg tgatgacgag
     4381 ggcatccgga cctccgaagc gtcgttcggc ggctacgggg cggctgtcga acctggcccg
     4441 aaaggccgag tcgaggacca ggaagtcgtc aaggtcggcg gccagccggt cacagatggt
     4501 gggccagaac cgggggtggg cggcttcacc ccgtgcctcg gcgtgggcac actcctcgtt
     4561 caggagctcg gcggcatggg ctcgttgggc ggcggtccac ggatcgccgt gtccggggag
     4621 ggacccgttg gcgaggccgt cggtcaccag ccggtcgagg acccggtgaa cgatcgagcc
     4681 acgtatcagc ggggagaggc cggtccgctc cgatggatct tcaagtggcc ggacaccgag
     4741 gacgtattcg gcgaagaagg cgaacgggca gtccacccac ttctcgaggc gggtggctga
     4801 cagttcgccg tcgaggacag ggagggtgac gcccgacagg ttcccgtcga accgggtgaa
     4861 gtccttgtcg gctcgctggc caaggagttc gattccccgg tcaaccacga catcgtcaca
     4921 acggagcttg tcgactgcgg gacggccgcc acgaatggcg gtggccaggt cgtattcctg
     4981 aacggtggcg ggatcgtcac ggtcaagggc gtcggtgaac gacgccacgt ggtcgaacca
     5041 gggtgcgacg aacaggtcga ggtcgtcgga ttcgggtcgg tggccggcca attcctcgaa
     5101 ctcggccagc agtagacgtg acatcggtcg gtcaccggag cgacgcaggt cgccgcgagg
     5161 ctgaacgagg acgatgcgtt cggcggcacc ggtgagggca gcgaggaagg cgtggtgctg
     5221 gcgggcggca tgctcgtggc gggtgggtag gccggtccgg gcggcggtgc gatggtcgtc
     5281 ggacagcaac gggtcggcgg gaggacgggt cggcatggaa ccctctgcga gaccgaccac
     5341 gattaccagg tcggcatcga ggccgacggc ctggtcaatg ccggtgacct gcacgccgat
     5401 cccgctgcgg ccagctcgcc cgatggggcg gccgagttcg gcggccagag caccccgaaa
     5461 gcttcgatag ggcggatggg gttcaatgtt gtccagttcg gacagggcat cgaggatcgc
     5521 gcccacctcg tccagggcga ggagttcgtg ggccgaccag gactcatggg cggtggtgcc
     5581 gccgaggtac tggcgaagca ggtcgcggac gcgtcggcac cggccagccc aggagtcgtc
     5641 ttcggtgagg ccatggaggg atgcgcagag tcgctccacg aaggccgcca gttgtcgggc
     5701 tcgtgtggcc tcggccgaca agcggtcggc cagccaggtt cggccctcgt cgtcgac
//
LOCUS       DASCMR010000017         8308 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000118329, whole genome shotgun sequence.
ACCESSION   DASCMR010000017 DASCMR010000000
VERSION     DASCMR010000017.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 8308)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8308)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8308
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000118329"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            427..1083
                     /locus_tag="QGG16_00280"
     CDS             427..1083
                     /locus_tag="QGG16_00280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23744.1"
                     /translation="MERLALPEAPKRLPDADLLLRRALGDRAGGKALNRLDEAARAFS
                     DDRFQDARRILNQLVERAPEVPEVIELLGLVHYRMGHWKAATKRLEVFREMTGSTEQH
                     PVLADCHRAQGRWDDVQVLWAELRDASPSGPLVTEGRLVAAGALADQGRIEEGLALLE
                     KGWRIPSRARDHHLRRAYALADLYERSGAEPRARELFIWVRNHDAQFADVAARVRALS
                     "
     gene            1303..2355
                     /locus_tag="QGG16_00285"
     CDS             1303..2355
                     /locus_tag="QGG16_00285"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HJP23745.1"
                     /translation="MDIASLLGADADDLLGHQCHTISADQLTTPGPDTVTDVYGITDR
                     SPQVLRNLQSLLDHGRLAGTGHVSILPVDQGIEHSAAASFAPNPDYFDPANIVELAIE
                     GGCNAVASTYGVLASVSRRYAHRIPFIVKINHNELLTFPNQFDQVMFGSVDQAFDLGA
                     AGVGATIYFGSPESTRQIQEVSEAFARAHELGMFTVLWCYLRNSGFKVDGVDHHASAD
                     LTAQANHLGVTIQADIIKQKLPETNGGYRALPGYGKTHDLVYDELTTDHPIDLCRWQV
                     ANCYMGRIGLINSGGASSGASDLAEAVRTAVVNKRAGGMGLISGRKAFQRPMAEGVEL
                     LNAIQDVYLDESITLA"
     gene            2405..3247
                     /locus_tag="QGG16_00290"
     CDS             2405..3247
                     /locus_tag="QGG16_00290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HJP23746.1"
                     /translation="MDLLLVDHPADGIRRLTLNRPDKRNALSHPLRGALLDALVAADV
                     DDSVRVTVVRGAGSCFSSGYDLGGGNEGHELPFPTTPGDGQWPRHVTDGWMGIWDLAK
                     PVIAQVHGWCLAGGSELATGCDLVYVADDARMGYPAVRFGVPDMHFHAWFLGMRKAME
                     MMVTGDSITGTEAVELGWANAAFPVDDLDEAVLEVAGRIAAMPPDVVQLNKRAVHRQM
                     EYMGMRAGIRAGTEICALGVHSASMAQFLSEVAESGLTEALQQRDEPFGDYRTGGPTR
                     GLEP"
     gene            3390..5051
                     /locus_tag="QGG16_00295"
     CDS             3390..5051
                     /locus_tag="QGG16_00295"
                     /inference="COORDINATES: protein motif:HMM:TIGR03710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HJP23747.1"
                     /translation="MTDIAEAPSAPALDEVIIRFAGDSGDGMQLTGDRFTNASAMFGN
                     DLATLPEYPAEIRAPAGTMAGVSAFQVHISDHDITTPGDAPDVLVAMNPAALKSDLQT
                     LVPGGTLIVNRDTFEERNLAKAGFDHNPLEGDDLVGYRLIEVPMTSLTKEACAEFGVK
                     PRDADRSKNFFALGLLSWMYSRPVEPTLDWIEAKFAGKDLIIAANRAAFNAGHAYGET
                     AELGSQRVIVKAAPLEPGTYTNINGNTALSWGLVAASQLSGLPLYLGSYPITPATDIL
                     HELSKHKAFGVTTFQAEDEIAAVGAAIGASYGGSLGVTTTSGPGMALKGEAMGLAVSL
                     ELPLVIVDIQRGGPSTGLPTKTEAADLMIAMYGRHGESPMPIVAARTPSDCFDTAIEA
                     ARIALVHQTPVILLSDGYLANGSEPWRLPELDDLPDIQVRYATEFNTVDEDGNDVFWP
                     FLRGEDGNRPIALPGTPDLMHRLGGIERRTVRATSATTPITMSTWSACATTESRRFPC
                     PMPSWKRALTATPTYWWWVGVRPGVPSPVLPAECVPPAGRSTTSN"
     gene            5048..5299
                     /locus_tag="QGG16_00300"
     CDS             5048..5299
                     /locus_tag="QGG16_00300"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23748.1"
                     /translation="MTHLNPLPANLGDLLRSHRGVLVPELNLGQLVRILRAEYLVDAR
                     PLSKVKGQPFTAGEIHIAIGEAMEELSGPAGGSTNEEVA"
     gene            5299..6348
                     /locus_tag="QGG16_00305"
     CDS             5299..6348
                     /locus_tag="QGG16_00305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HJP23749.1"
                     /translation="MTDVIIDPAATVDDGPAPETSKADWTSDQEVRWCPGCGDYSILT
                     AIQLLMPELGVRREKTVFISGIGCAARFPYYMDTYGVHTIHGRAPAVATGLAMARPDL
                     DVWVIGGDGDMLSIGGNHLIHALRRNINLNVLLINNQIYGLTKGQFSPTSQKGKVTKS
                     SPVGLVARPFNPISVALGAEATFVARTHDMDRRHMQETFRRAHEHEGAAFVEVLQNCN
                     VFNDGVFASITKKDVREDMLIELQHGKPILFGSENQYGVARRPEGVVIVDVAEVGIEY
                     VLVHDENIRNPSTAFSLSRLAKTPATPTPIGVFRAIDRGEFASSVSAQIREVQAQVGQ
                     GDLSDLLRSQPTWDV"
     gene            6364..7164
                     /locus_tag="QGG16_00310"
     CDS             6364..7164
                     /locus_tag="QGG16_00310"
                     /inference="COORDINATES: protein motif:HMM:TIGR01460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIA family hydrolase"
                     /protein_id="HJP23750.1"
                     /translation="MAWALDLDGVVWRGTDGVPGAGEAVRLLQDSGERVLFVTNNSGR
                     PVSDTEDKLAGLGIDAMGGVVTSGMAAARLVVPGERVLGMCGPGCREELERVGAEVVR
                     DGMVDTVVVGFHDDFDYRGLTAAVQAVLGGARLLGTNDDVTFPAHDGLRPGAGSLLAA
                     VVAATGATPELAGKPYGPMCELVRDLADAGDVEKESAGTAETGHVMVGDRPDTDGRFA
                     RALGWRWSLVLSGLIGKDDLPVDPDSDTVHDDLLACVLEYLGERERLG"
     gene            7161..7976
                     /locus_tag="QGG16_00315"
     CDS             7161..7976
                     /locus_tag="QGG16_00315"
                     /inference="COORDINATES: protein motif:HMM:TIGR00478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HJP23751.1"
                     /translation="MSARRRLDLELVRRGLVEGRGAAQDVIEDGRVTVDGAPADKAAR
                     LVDPGQAVVVTGAPPKYVSRGGRKLEAALDRFGIDPTGHRVVDVGASTGGFTDCVLQR
                     GAVSVVAIDVGRGQLHQRLMVDDRVAVHERTNVRGVDGTALGAPFGLLVADLSFISLR
                     TVMPDLVGLVAEGASLVLLVKPQFEAGKAEVDRGSGVIRDPEVWLTVLKAVDVSVRGH
                     AAAIMEGMPSPITGADGNVEFLVHVRAGTVGTPLDTTGLVAEALRSREQAVDR"
     gene            7976..>8308
                     /locus_tag="QGG16_00320"
     CDS             7976..>8308
                     /locus_tag="QGG16_00320"
                     /inference="COORDINATES: protein motif:HMM:NF013663.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)/NADH kinase"
                     /protein_id="HJP23752.1"
                     /translation="MALVVLVVHEERPEAVAQADALAAVLVGDGHQVNRSDDPGFTTT
                     GMDDATDLVVSLGGDGSILRAVDLLDGRSAPILGVNHGELGYLATVEPADAHASVVRV
                     LAGEHDLEE"
BASE COUNT         1389 a         2627 c         2872 g         1420 t
ORIGIN      
        1 cggggtggat ctcggggtgg atctcggggt ggatcgtcgg gcggttcccg cggtggatcc
       61 ggcggcgact cccgtggtgg ccccaaacgt ggcgaccggc gatcgggttc cggtagcggt
      121 tcccgaccgg gaggccagag gcgtgacggg gatcgacgtg gtggcggaga agccgtcacg
      181 gatcggcgtc ggcgtggacc cgatgcggcc ggcccgacca catggggtgg cgtggcccgt
      241 cgtggagccg ggcgcctgga acgcgaggag caggaggatc gtccggagcg acgagaccgg
      301 acggcggaac gaacgacccg acccagacgc cccgagccgg aacggtctga tcgtcttcgt
      361 aacgaggcgg ctgaggcggt ggctcgtggc gggtccaggg gtggatcgaa gcggggccca
      421 agggcgatgg aacgtttggc cctgcccgag gcacccaaga gactccccga cgccgatctc
      481 ctgcttcgac gagcactagg cgaccgggcg ggcggcaagg ccctcaatcg actggacgaa
      541 gccgcccgcg ccttctccga cgatcggttc caggatgccc gtcgcatcct gaatcagttg
      601 gtggaacgag caccagaggt gcctgaggta atcgagttgc tcgggctcgt gcactaccgc
      661 atgggccact ggaaggcggc gaccaagcgc ctcgaggtct tccgtgagat gaccggaagt
      721 acggagcagc accctgtgct ggccgactgc catcgcgctc agggcaggtg ggacgacgtc
      781 caggtgctgt gggctgaact ccgtgatgcc tcccccagcg gcccgctcgt caccgagggc
      841 cgactggtgg ccgccggagc acttgccgac cagggccgta tagaggaggg cctcgccctc
      901 ttggaaaagg gttggcggat cccgtcgagg gcccgcgacc accacctccg gcgggcctac
      961 gcgttggccg acctttacga gcggtccggt gccgaaccgc gggcccgcga gttgttcatc
     1021 tgggttcgga atcatgacgc ccagttcgcc gacgttgcgg ctcgggtgcg tgctctttcc
     1081 tgaagagctt ttgttcctga agtgcacttt ccggtggtcg tgggttcctc caggagcggg
     1141 ctctgaagag tctggcctcc cagtgaattc gaccgtgacc gatgacccgc cacggctccc
     1201 caagggccac gcgtgcccca tggtcgcgac gtagggtgat ccggtccccg ggttttcggt
     1261 ggaccttgga gaccagagaa tcaccagaca ggagccactc aggtggacat cgcatccctg
     1321 ctcggcgctg acgccgacga cctactcggc catcagtgcc acactatttc cgctgaccag
     1381 ctgaccacgc cgggacccga cacggtgacc gacgtctacg ggatcacgga tcgctcgcca
     1441 caggtcctcc gtaacctcca gtcgcttctc gatcacggcc gtctggctgg tacgggccac
     1501 gtctccatcc ttccggtcga ccagggcatc gaacactcag cggccgcgtc gttcgctccg
     1561 aatccggact acttcgatcc agcgaacatc gtcgagttgg ctatcgaggg tggttgcaac
     1621 gcggtggcca gcacctacgg cgtcttggct tcggtgtcac gccggtacgc ccaccgcatc
     1681 ccgttcatcg tcaagatcaa ccacaacgaa ctgctgacct tcccgaacca gttcgaccag
     1741 gtcatgtttg gttctgtcga ccaggccttc gacctcggag cggccggggt gggggccacc
     1801 atctacttcg gctcgcccga gtccacccgc cagatccagg aggtcagcga ggccttcgcc
     1861 cgggcccacg aactcggaat gttcacggtg ctgtggtgct acctccgcaa ctctggcttc
     1921 aaggtggacg gcgttgatca ccatgcctcc gccgacctga ccgcccaggc caaccacctc
     1981 ggcgtgacca tccaggccga catcatcaag cagaagctcc cggagaccaa cggtggctac
     2041 cgggccctgc ccggttacgg caaaacccac gatctcgtct acgacgagtt gaccaccgac
     2101 cacccgattg atctctgtcg ctggcaggtg gccaactgct acatgggacg gatcgggctc
     2161 atcaacagcg gcggtgcctc ttcaggagcc agcgacctgg ccgaggctgt ccgcaccgca
     2221 gttgtcaaca agcgggcggg gggcatgggc ctgatcagcg ggcgcaaggc attccagcgc
     2281 ccgatggccg agggtgtcga gctcctcaac gccatccagg atgtctacct cgacgagtcg
     2341 atcaccctgg cctagggccg ggggtcggcg tcagtaacag atgtccaggg gcggttcgga
     2401 aacgatggac ctgctgctgg tcgaccatcc ggccgacggg atccgtcgac tgaccctcaa
     2461 ccggccggac aagcgaaacg cgttgagtca tccgctacgg ggcgctctac tcgacgctct
     2521 ggtggctgcc gatgtcgatg actcggtgag ggtcaccgtc gtcagaggtg caggaagctg
     2581 cttttcgtcg gggtacgacc tgggcggggg gaacgagggg cacgaacttc ccttcccgac
     2641 cacgcccggg gacggccagt ggccccgcca cgtgaccgac ggatggatgg gcatctggga
     2701 cctggccaaa ccggtcatcg cccaggtgca cggctggtgt ctggcaggcg ggagcgagtt
     2761 agcaaccggt tgcgacctcg tctacgtggc cgatgacgcc cggatgggat atccggcagt
     2821 gcgattcggt gtgcccgaca tgcacttcca cgcctggttc ctcgggatgc gaaaggccat
     2881 ggagatgatg gtcaccggtg actcgatcac cggaacggag gccgttgaac tgggctgggc
     2941 caatgcggcc tttccggtgg acgacctcga tgaggccgtg ctcgaggtgg ctggccggat
     3001 cgccgccatg ccgcctgacg tggtccagtt gaacaagagg gccgtgcacc ggcagatgga
     3061 atacatgggg atgcgggcgg ggatccgtgc gggcaccgaa atctgtgcgc tgggtgtgca
     3121 ctcggcatcg atggcccagt tcctctccga ggttgccgag tccggactca cggaagccct
     3181 gcaacagcga gacgaaccgt tcggggatta ccggacgggg ggcccgaccc gggggcttga
     3241 accgtaggtc tgacctggca tccggccggt cgtcgggatc ggcacctgtg acccattcaa
     3301 cgccggtcgg gggcgttgca tcgtgaccgc cccgaagacc cgcggttagg gtccgttcga
     3361 aggcaacgac gccccgtgga ggaagcaacg tgacagacat cgcggaggcc ccctcggcac
     3421 ccgccctcga cgaggtcatc atccggttcg ccggcgactc gggcgacggg atgcagttga
     3481 cgggtgaccg gttcaccaat gccagcgcca tgttcggcaa cgacctggcc acgttgccgg
     3541 agtatccggc tgagatccgg gctccagccg gcacgatggc cggggtctcg gcgtttcagg
     3601 tccacatctc ggaccatgac atcaccaccc cgggcgacgc ccccgacgtg ctggtggcca
     3661 tgaacccggc ggcgttgaag tcggatctcc agaccctggt tcccggcgga acgctgatcg
     3721 tcaaccggga caccttcgag gagcggaacc tggccaaggc cgggtttgac cacaaccccc
     3781 tcgagggcga cgacctggtg ggctatcggc tcatcgaggt tcccatgacg tcgttgacca
     3841 aggaggcctg tgccgagttc ggcgtcaaac ccagggacgc cgaccggtcc aagaatttct
     3901 tcgccctcgg cctgttgtcg tggatgtaca gccgccccgt cgaaccaacg ctggactgga
     3961 tcgaggccaa gttcgctggc aaggacctga tcatcgccgc caaccgggcg gcgttcaacg
     4021 ccggacacgc ctatggggag accgcggagc tgggctccca gcgggtcatc gtgaaggcag
     4081 cgcccctgga acccggcacc tacacgaaca tcaacggcaa cacggcgttg tcgtggggcc
     4141 tggtagctgc ctcccaattg agcggcctgc cgctctacct cgggtcgtac cccatcaccc
     4201 cagccaccga catcctccac gagctgtcca agcacaaggc tttcggtgtg acgaccttcc
     4261 aggcagagga cgagatcgcg gcggtcggtg cggcgatcgg tgcttcctac ggaggctcgc
     4321 tcggtgtgac gacgaccagt ggtccgggta tggcgctcaa gggcgaggcc atgggtctgg
     4381 cagtcagcct cgagttgccc ctggtcatcg tcgacatcca gcggggtggt ccttcgaccg
     4441 ggctacccac caagacagag gccgccgacc tgatgattgc catgtacggc cgccacggtg
     4501 agtcgcccat gcccatcgtg gccgcccgga ccccgtcgga ctgcttcgat acggccatcg
     4561 aggcggcacg gatagcgctc gtccatcaga cgccggtgat cctgttgtcc gatggctatc
     4621 tggccaatgg gtccgagccg tggcgcctgc ccgaactcga cgacctgccc gacatccagg
     4681 tccggtacgc cacggagttc aacacggtcg acgaggacgg caacgacgtg ttctggccgt
     4741 tcctgcgcgg agaggacggc aaccgaccga tcgccctgcc cggtacgcca gacctcatgc
     4801 accgtctcgg tggcatcgag aggaggacgg ttcgggcaac gtcagctacg accccgataa
     4861 ccatgagtac atggtccgcc tgcgcaacga ccgaatcgcg tcgattcccg tgcccgatgc
     4921 cgagttggaa gagggctctg acggcgacgc cgacctattg gtggtgggtt ggggttcgac
     4981 ctggggtgcc atcaccggtg ctgcccgccg agtgcgtgcc gccggcggga aggtcgacca
     5041 cgtccaattg acgcacctga acccgctgcc cgccaatctg ggcgacctgc tccgatccca
     5101 ccgcggggtg ctggtacccg agctgaacct cgggcaacta gttcgcatcc tgcgggccga
     5161 gtacctagtt gatgcccgac cgttgtccaa ggtgaagggc cagcccttca cagccggaga
     5221 gatccacatc gccatcggag aagccatgga ggaactctcc ggaccagcag gtggatcgac
     5281 caacgaggag gtcgcctgat gactgacgtg atcatcgatc cggcggccac cgtcgatgac
     5341 ggaccggcgc ctgagacgag caaagccgac tggaccagcg accaggaggt ccgctggtgc
     5401 ccggggtgtg gtgattactc gatcttgacc gccatccagc tactcatgcc cgagttgggt
     5461 gtgcgccgcg agaagacggt cttcatctcg ggtatcgggt gcgcggcccg gttcccgtat
     5521 tacatggaca cctacggagt gcacaccatc cacggtcggg cgcccgcggt ggccaccggt
     5581 ctggccatgg cccgaccgga tctagacgtg tgggttatcg gcggcgatgg cgacatgttg
     5641 tccattggcg gcaatcacct catccacgcg ctacgccgca acatcaacct gaacgtcctg
     5701 ctgatcaaca accagatcta cggcctgacc aagggccagt tctcgccgac cagtcagaag
     5761 ggcaaggtga ccaagtcgtc gcccgtcggc ctggtggccc gacccttcaa cccgatcagc
     5821 gtggcgttgg gcgccgaggc gaccttcgtg gcccgcacgc atgacatgga ccgtcgccac
     5881 atgcaggaga cgttccgtcg ggctcacgag cacgagggag cggcgttcgt cgaggtgctc
     5941 cagaactgca acgtctttaa cgacggcgtc ttcgcgtcga tcaccaagaa ggacgtgcgc
     6001 gaagacatgc tcatcgaact gcagcacgga aagccgatcc tgttcggctc cgagaaccag
     6061 tacggcgtcg cgcggcgccc cgagggtgtc gtcatcgtgg acgtagccga ggtgggtatc
     6121 gagtacgtgc tggtgcacga tgagaacatc cggaatccgt cgaccgcctt ctcgctgtcc
     6181 cggctggcca agactccggc cacccccact ccgatcgggg tgttccgggc cattgaccgg
     6241 ggcgagttcg cctcgtcggt ctcagcccag attcgcgagg tccaggctca ggttggccag
     6301 ggagacctct cggacctgtt gcggtcgcag cccacctggg acgtctgagg ccccgagtcc
     6361 gccatggcgt gggcactgga ccttgacggc gttgtctggc ggggtaccga cggggtaccg
     6421 ggggcgggtg aagcagtccg actcctgcag gattcgggtg agcgcgtcct attcgtgaca
     6481 aataactcgg gtcggccggt ttctgacacc gaagacaagt tggctggtct gggaatcgac
     6541 gccatgggtg gcgtggtcac gtcgggaatg gccgccgccc gtctggtggt ccccggagag
     6601 cgggtgctgg ggatgtgtgg tcccggttgc cgcgaggagc tcgaacgggt gggtgccgag
     6661 gtggtgcggg acgggatggt cgacacggtg gtggtcggct tccacgatga cttcgactac
     6721 cggggcctga cggccgccgt gcaggcggtc ctagggggcg cccgactgct gggcaccaac
     6781 gatgacgtga ccttcccggc ccacgacggg ttacggcccg gagccggctc gttgctggcc
     6841 gcggtggttg ccgctacggg ggcgacgccc gaactggcgg gcaagcccta cgggccgatg
     6901 tgtgagctgg tccgcgatct ggcagacgcc ggggacgttg aaaaggagtc cgctggcacc
     6961 gcggagacgg gccacgtgat ggtgggggac cggcccgaca ctgatgggcg atttgcccgg
     7021 gcgttgggct ggcgttggtc tctggtcctc tcaggcctga tcgggaagga cgatctgccg
     7081 gtggatcccg attccgacac ggtgcacgac gacctgctcg catgtgtcct cgagtacctg
     7141 ggtgaacggg agcgtctggg gtgagtgccc gccggcgtct cgacctggag ctggtgcgac
     7201 gcgggttggt tgaggggcga ggcgcggccc aggacgtcat cgaggatggt cgggtgacgg
     7261 tggacggggc gccggccgat aaggcggcgc gcctcgtgga tccgggacag gccgtggtcg
     7321 tgacaggagc gccgccgaag tacgtgtccc gtggtggtcg gaagttggag gccgccctcg
     7381 accggttcgg gattgatccg accggccacc gggtggtcga cgttggggcg agcaccggcg
     7441 gttttaccga ttgcgtactt caacgtggtg cggtctcggt ggtggccatc gacgtggggc
     7501 ggggtcagct ccaccaacgg ctaatggtcg atgatcgggt ggcggtccac gagcggacca
     7561 acgtccgggg ggtcgacggg acggccctcg gcgctccgtt cggtctgctg gtagccgatc
     7621 tctcgttcat ttcgctacga accgtgatgc ctgacctagt cgggttggtg gctgaaggcg
     7681 cttctctggt gctgctggta aagccccagt tcgaggctgg aaaggccgag gtcgatcggg
     7741 gaagcggtgt gatccgggac cccgaggtct ggttgacggt gctcaaggcg gtcgacgttt
     7801 cggttcgcgg gcacgcagcg gccatcatgg aggggatgcc ttctccgatc accggtgccg
     7861 atggaaacgt ggagttcctc gtgcacgtgc gcgccggcac agtgggaacg ccactggaca
     7921 caacaggtct ggtggctgag gcccttcgat cccgggagca ggcggtggat cgctgatggc
     7981 gctcgtcgtg ctagtcgtcc acgaggagcg ccccgaggct gtagctcagg ccgacgcttt
     8041 ggctgctgtc ctggtgggcg acggccatca ggtaaaccgc tccgacgatc ccggcttcac
     8101 gactacgggt atggatgacg ccacggatct ggtggtgagc ctgggcgggg acgggtcgat
     8161 cctgcgggcc gtcgacctcc tggatggccg gtccgctccg atcctggggg taaaccacgg
     8221 cgaactgggg tatctggcca ccgtggagcc cgccgacgcc cacgcttcgg tggttcgggt
     8281 gctggccggc gaacacgatc ttgaggag
//
LOCUS       DASCMR010000018        14412 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000121847, whole genome shotgun sequence.
ACCESSION   DASCMR010000018 DASCMR010000000
VERSION     DASCMR010000018.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 14412)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14412)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14412
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000121847"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2255)
                     /locus_tag="QGG16_00325"
     CDS             complement(<1..2255)
                     /locus_tag="QGG16_00325"
                     /inference="COORDINATES: protein motif:HMM:NF012706.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJP23753.1"
                     /translation="MKKIIRLVAVLAALTLVAGACGSDDDAAAPAAAEAPAATEAPAA
                     TEAPAESLSELNVAYFLEWPTANQVAQVEETYDERLGMTVNWLPFGSGGDMALAMESG
                     DIDIAYSQGLTPFANFVTSGSELEIVGVAVSYADADNCVAHPDYGVTAANAAETLAGQ
                     KIYAPVGNVTHYKLLKMLGHLGVPLDSFEHVPSDGGAAAVAAFESGDVAMACAFGGGV
                     LSMLDAGGNLVMTGSEQEAIGIRVFDIISIPTQFGIDHPDVVETFLQVTEEANAAYAG
                     GRRALEATIAEAAGMTVEGSNALLDMFSFPDRATQLSDAWLGGTVQDVMKQQMDFFVE
                     QGEIPEALDSYDAFVNTSFLSNISDVEVVMTSSGAGEGGTVTILYWQAASTLNAYLSG
                     GWKDRDASSVILEPLAEFDDQGVLVPALATVIPTVANGGVSEDLTSITWKLHEGVVFS
                     DGTPLTSDDVVFSWEYCSNPDTGCTGASGFDGVTSVVADDDLTITINFAEATPFPYVP
                     FVSNSFPVISRAQFGDCVGAASAECTDENFGPIGTGPFKIESFTTNDTAVYVMNENYR
                     GVPDGKPYFGRVVIKGGGDAPSTARSVLELGEADYAWNLQVEPEILASMLAGGKGRVI
                     SAFSTMVERMMVNQTNPDPDLGDDRSEWLDGTNPHPFLTDPVVGRALSISLDRQTMVD
                     VGYGEAGRPTCNVWPAPPAQTSTSNDECLTQDIDLANQLLDDAGYLDTDGDGVRETPD
                     GMPMKILYQTST"
     gene            complement(2452..3483)
                     /locus_tag="QGG16_00330"
     CDS             complement(2452..3483)
                     /locus_tag="QGG16_00330"
                     /EC_number="7.4.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016290536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HJP23754.1"
                     /translation="MDAELTVVQEQAPEAPEVPEVLVSVRDLKKHFPVTKGALRRKVG
                     AVRAVDGVSFEIMRGQTLGLVGESGSGKSTIGRTLLRLEEPTEGTVVFDGGDMADLSA
                     RELRKVRPRMQMVFQDPHACLNPRMTVSSIIGEPLVEHLSMTSRERNERVEELLGLVG
                     LNPEHANRYPHEFSGGQRQRIGLARAISLNPDLIVCDEPIAALDVSIQAQVVNLMEEL
                     QDLLGLTYLFISHDLGMIRHIADRVAVMYLGRIMELADVDGLYDNPLHPYTRALQSSA
                     PVPDPAAEATREKIVLEGDIPSPSSPPPGCVFSTRCPEAVDRCRSEVPVWREVSPGHG
                     VACHLVPAI"
     gene            complement(3473..4513)
                     /locus_tag="QGG16_00335"
     CDS             complement(3473..4513)
                     /locus_tag="QGG16_00335"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJP23755.1"
                     /translation="MTVDTTPVLRVTDLTTRFNTQDGTVHAVNGVSFDLADGEVVGVV
                     GESGSGKSVTMMSLLRLIPSPPGEISAGQAIFEGDDLLSMDFGDLREVRGGKVGFIFQ
                     DPMTSLNPVVTVGDQIVESLTVHQPGRRKAMRLRALELLELVGIPSPEERLRCYPYEL
                     SGGMRQRVMIAIALACNPKILVADEPTTALDVTIQAQILELVKGLRQELGMAVIWITH
                     DLGVVAGLVDRVLVMYGGQIVEDAPVDEFYAQPRHPYSQGLLASLPSATSRGDKLVNI
                     QGQPPDLRSAPASCSFAPRCPHAFDRCDRENPVLVAVSATRKVACWLNEVPVLVGAQS
                     DETAKGQVGHGR"
     gene            complement(4518..5687)
                     /locus_tag="QGG16_00340"
     CDS             complement(4518..5687)
                     /locus_tag="QGG16_00340"
                     /inference="COORDINATES: protein motif:HMM:TIGR01891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallopeptidase"
                     /protein_id="HJP23756.1"
                     /translation="MTDTTITEGPSKVAARKAFGKVETELRDLSRWMYENPELGYEEF
                     EASERLSSFLGRNGFDVTYPSHGLDTAFEATAGTSGPRVVICCEYDALPEVGHACGHN
                     IIATSAVGAGAALAPLAEELGIRVTVLGTPAEEGGGGKVELIEAGAFEDAAASMMVHP
                     GPYDELDPWFQACQHYDVEFFGKDSHAAFAPEEGINALDAFVQAYVNISTLRQAMVDD
                     DRIHCKVTHGGDAVNVVPSHTKSEWLIRSGSVERLAELIPKVKACFEGAAIATGCRFE
                     WHETAHPYESMRNNDVMTELYAVNSEAIGRPMPTHAEQGGGSGSSDMGNVSQIVPSIH
                     PMLGMDCGDAVNHQPEFADRTVEPGGELALRDGALGMAYTVIDMAEQDVWDRLGA"
     gene            complement(5709..6209)
                     /locus_tag="QGG16_00345"
     CDS             complement(5709..6209)
                     /locus_tag="QGG16_00345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HJP23757.1"
                     /translation="MGTQDAGSPDEESSKGEATPVEVREVTEVDGALLGAMARLIPQL
                     SSSNPPPDAMALEVIVSSDASILLLAVDPATTGEAAILGSLTLALFHVPTGLRAWIED
                     VVVDEGARRRGVGEALNRAAIERARREGATTVDLTSRPSREAANRLYRRLGFEERLTN
                     VYRLDL"
     gene            6308..7189
                     /locus_tag="QGG16_00350"
     CDS             6308..7189
                     /locus_tag="QGG16_00350"
                     /inference="COORDINATES: protein motif:HMM:NF021287.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043248 - proteasome assembly [Evidence
                     IEA];
                     GO_process: GO:0051131 - chaperone-mediated protein
                     complex assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAC2 family protein"
                     /protein_id="HJP23758.1"
                     /translation="MPIDSAPHLAPHLSWHVEKLPIKLRSPVLLAAFEGWNDAGEASS
                     TAARYIRDHYEAVHVATIDAEDFFDFTVARPSVCLDEDDVRQIVWPSTSIYVARVPDA
                     DHDLVCAIGHEPQLRWRTFVDHIAHTAEVFDAAMVCTLGALLTDVPHTRPTQVYGGTE
                     DARLAERLDLSPSTYEGPTGIVGVLAAGLRDRGVVTASFWASVPSYVSNAPSPKAALA
                     LVERLCRVFEIDVARTDLEILAADYERQVTELVSEDDGTVEYVEQLEADFDEETADAP
                     DRLVAEVEDFLRNQPGT"
     gene            complement(7230..8000)
                     /locus_tag="QGG16_00355"
     CDS             complement(7230..8000)
                     /locus_tag="QGG16_00355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase N-terminal domain-containing
                     protein"
                     /protein_id="HJP23759.1"
                     /translation="MNSDPGVPPPPGQADLLRWAEALSASARTGMGFTESLYEKERYE
                     EVLHVAAEIRSRSDALSGRTVDPDNLVAEWYDTVGSGVRGYVTPKTTVGAVVGNDAGE
                     MLLVQRSGSGVWLYPTGWADVGYSPAEVVVKEVLEETGIECEVVRPIAILDGLRLGIT
                     GIPLYSLVFHCRMTGGELAAHPLECLDVGFFAADSMPEGHALPAEWVDEAFAAIRGEP
                     MEVRYDHPREPMWEGDAASEGEAASEKDVTLEADLGIG"
     gene            complement(8055..10361)
                     /locus_tag="QGG16_00360"
     CDS             complement(8055..10361)
                     /locus_tag="QGG16_00360"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: protein motif:HMM:NF002895.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008773 - [protein-PII]
                     uridylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="[protein-PII] uridylyltransferase"
                     /protein_id="HJP23760.1"
                     /translation="MFDISDLLDDRSLQGPAFCAALTGRFDDYLAAVFAAADVPPGVA
                     LVAVGGYGRGEQCPGSDLDVALVHIPGMDMGDIAERVWYPLWDAGLKLGHQVGTVAQL
                     LDVGAENLETATSLLAARVVAASSADGEALVDDLAERALAQWKGRSRQNLDQLQGAVA
                     ERHARFGEVAFLLEPDIKEARGGLRDVHSLFWVEQATVPILREAESAGLAAAFETLLE
                     VRVELHRLTGQRADKLLLELQDDVAAALGLADADVLMAEVSAAGRTIAWTGEGAARRT
                     LRASRRRGPMKALSGIRRREVAPGLVLDDGRLELTDDADLGDPLLVLRYAASAARHDA
                     YLQRGSLERLADHAEPLPAPWPAEARGLFVDLLAAGPAAIPVIEDLDQVGLFVLLVPE
                     WEPCRSRPQRNAYHRFTVDRHLMEAAAEASRLVGQVERPDLLLVGALFHDIGKGYPGD
                     HTVVGVDLLTTIAARMGYEGDDVDLLVAMVEHHLLLPDVATRRDLDDNGTIRQVADAV
                     GGTVLLGLLGALTEADSIATGPSAWSNWKAGLVRELVERTSHVLGGGDVGDVVGGSFP
                     DAAQQALLDDGTFVVRGEGLELTVVAADRPGTFAKVAGVLALNGADVLGASAHSEHGR
                     ALSVFRVGSVLGGEPDWARIDEQVNRALAGRLAVAARLGDRSRTYRPIHLTARPARPT
                     MTVDNVSSATATVLEVTCPDGVGVLYRITRAFAELDLDIVRAHVQTLGSDVIDAFYVR
                     DQFGAKITDPEHLAEVELSVLRWVAVDF"
     gene            complement(10394..11632)
                     /locus_tag="QGG16_00365"
     CDS             complement(10394..11632)
                     /locus_tag="QGG16_00365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HJP23761.1"
                     /translation="MDSGDIAWMLTSTALVVFMVPGLALFYGGMVRSKNVLNMLMMNM
                     YCIGIVPIVWVLVSYSIGNSPDGDGFFGGDWIGNFDFIGLKGMAGDTEGLVFVAFLMT
                     FASITPALISGAVADRLKFSAWVLFVPVWLVLVYSPVTYWVYSGWQHGNGALDFAGGT
                     AIHVNAAAAALAFVLVLGKRKGWPTEAMPPHDMPLVMIGTGILWFGWFGFNAGSAGAA
                     NGQAVQALLNTFLAAAAGMVGWLATEKLRDGQATSLGAASGVVAALVAITPAAGYVGG
                     LAGIVFGLLAGSVCYLALTLKTRFGFDDSLDVVGIHGVGGILGGLLLGLFADSSAIPG
                     GGFDDGLFFGGGIELFLDQAVAIGSVVVFSFAMTWVIVKAIDAVVGLRVDEETEVVGL
                     DQRIHAESAYNEGPKGSVVA"
     gene            complement(11766..12275)
                     /locus_tag="QGG16_00370"
     CDS             complement(11766..12275)
                     /locus_tag="QGG16_00370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23762.1"
                     /translation="MEPDPGPPREPEARLAELADVLVDGLVAALPGWVEQCVSRVAEA
                     WSEDPAGGTVEVPAERLADAGRRAADEVGERLRALLDADVDEQWTGPLAVLRDAVRFP
                     TELLRTAGVPPVDRDGDAVRMFPDDLYDLTPSSFADVHPDLQGPGLAWGAAKAFVHRR
                     RHLEGDGSS"
     gene            complement(12265..13098)
                     /gene="larE"
                     /locus_tag="QGG16_00375"
     CDS             complement(12265..13098)
                     /gene="larE"
                     /locus_tag="QGG16_00375"
                     /inference="COORDINATES: protein motif:HMM:TIGR00268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent sacrificial sulfur transferase
                     LarE"
                     /protein_id="HJP23763.1"
                     /translation="MRRLDVSEPSALKSEALHRVLRDLDRVVVAFSGGADSALLAHAA
                     HTLLGPDRVHVVTAVSPSLASDERADAASLADEWGLRWSAVETDEMTHAAYRANDADR
                     CAHCKDALMDVLAPIAVAESATVVLGVNVDDLGDHRPGQKAAADRGARFPLVEAGLTK
                     DDVRARSRALGLRTADKPATACLASRVPYGTEVTVGVLSGVERAEAALRRLGFDGLRV
                     RHYDDTARIEVPTDRLADVVERRDAVVAAVTSSGYRYVTLDLEGLRSGNLNAALGPDG
                     A"
     gene            complement(13134..13817)
                     /locus_tag="QGG16_00380"
     CDS             complement(13134..13817)
                     /locus_tag="QGG16_00380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chlorite dismutase family protein"
                     /protein_id="HJP23764.1"
                     /translation="MSEPVSPSDGLAVLHLFLKVCGQSDAAAVRVAVDAATEAGDQVV
                     PVAILGHKADVAVMTLGTDLWRLRALQTALVAAGLELVDSYLSLTEVSEYAQGVPDEM
                     KRARLYPVLPPEGMPAWCFYPMSKSRDVGANWFELPYDDRHELMMEHGTSGRTFAGRI
                     LQVVTGSTGIDDFEWGVTLFGQHPDDLKDVVYTMRYDRASARFGQFGAFYAGMVDELD
                     VVLKRVGCT"
     gene            complement(13853..>14412)
                     /locus_tag="QGG16_00385"
     CDS             complement(13853..>14412)
                     /locus_tag="QGG16_00385"
                     /inference="COORDINATES: protein motif:HMM:NF014671.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HJP23765.1"
                     /translation="GQGLASEAEYNDVTVDTGGRAPVPTPRLGPASSSCGICGTVAID
                     ELRERLRPLDVEPFDVEVLAAMTDHIDGQALFSTTGAVHAAVAFDRKGQPLLLREDIG
                     RHNAVDKVVGRLHMDGLLPAGDLGLWVSGRASFEMAQKAWAAGFASLVAVSGPSALAV
                     ETARTANLQLAGFARGDRLNLYTGD"
BASE COUNT         2628 a         4908 c         4616 g         2260 t
ORIGIN      
        1 gtggacgtct ggtacaggat cttcatcggc atgccgtcgg gcgtctcgcg caccccatca
       61 ccatcggtgt cgaggtagcc agcatcgtcc aacaactggt tggccagatc gatgtcctgg
      121 gtcagacact cgtcgttaga cgtcgacgtc tgggcaggcg gcgcaggcca cacgttgcaa
      181 gtcggacgac cggcctcgcc gtaaccgacg tcgaccatgg tctgacggtc cagggaaatg
      241 gagagggcac ggccgaccac cggatcggta aggaacgggt gggggttggt gccgtcgagc
      301 cactcggaac ggtcgtcgcc gaggtccgga tccgggttgg tctggttgac catcatgcgc
      361 tcgaccatgg tcgagaaggc cgagatgacc ctgccctttc cgccggccaa catgctggcc
      421 aggatctccg gctcaacctg caggttccat gcatagtcgg cttcaccgag ctccagaacg
      481 gagcgggccg tcgagggagc atcgccgccg cccttgatca cgacacgccc gaagtagggc
      541 ttaccgtcgg gcacgccgcg gtagttctcg ttcatgacgt agaccgcggt gtcattcgtg
      601 gtgaacgact cgatcttgaa cggaccagta ccgatcggac caaagttctc atccgtgcac
      661 tcggccgagg ccgcgcccac gcagtcgccg aactgggccc gagaaataac cgggaaactg
      721 ttcgaaacga acggcacgta ggggaacgga gtcgcctcag caaagttgat cgtgatcgtg
      781 agatcgtcgt cagcaaccac agaggtcaca ccgtcgaagc ccgacgcacc ggtacaaccg
      841 gtatcgggat tcgagcagta ctcccaactg aagaccacat cgtcggaggt caacggggtg
      901 ccatcagaga acaccacacc ctcgtgcaac ttccatgtga tgctggtcaa gtcctcggaa
      961 acgccaccat tggcaaccgt cgggatcacg gtggccagcg cgggaacgag cacgccctgg
     1021 tcatcgaact cggccaacgg ctcaaggatc acagaagaag catcacggtc cttccaacca
     1081 cccgacaggt acgcgttcag cgtggatgcg gcctgccagt aaaggatggt cacggtgccg
     1141 ccttcgccgg cgccgctgga cgtcatcacg acttcgacgt cgctgatgtt gctcaggaac
     1201 gacgtgttca cgaacgcgtc ataggagtcc aacgcctcag ggatctcacc ctgctcgacg
     1261 aagaagtcca tctgctgctt catcacgtcc tggacggtcc cgcccaacca cgcgtcggac
     1321 aactgggtcg cccgatccgg gaacgagaac atgtccagta gggcattgga gccctccacc
     1381 gtcatgcccg ccgcttcggc aatcgtggcc tccagggcac ggcggccacc ggcgtaggcc
     1441 gcgttggcct cctcggtcac ctgcaggaac gtctcgacga cgtccggatg atcgatgccg
     1501 aactgggtcg ggatcgagat gatgtcgaag acgcggatgc cgatggcctc ctgctccgaa
     1561 ccggtcatca ccaagttgcc gccggcgtca agcatcgaca gcacaccgcc gccgaaggca
     1621 cacgccatgg ccacgtcgcc gctctcgaag gctgcaaccg ctgccgcacc accgtcggag
     1681 ggaacgtgct cgaagctgtc cagcggcacc ccgaggtgcc ccagcatctt cagcaacttg
     1741 tagtgggtga cgttgccgac cggggcgtag atcttctgtc cggccagtgt ctcggccgcg
     1801 ttggccgccg tcacgccgta gtccggatgc gctacgcagt tgtcggcgtc cgcatagctc
     1861 acggccacac cgacgatctc cagttcggac cctgaggtca cgaagttggc gaacggggtc
     1921 aagccctggc tgtaggcaat gtcgatgtcg ccggactcca tggccaacgc catgtcgccg
     1981 ccggaaccga acggcagcca gttcacggtc atgccgagac gctcgtcgta ggtctcttca
     2041 acctgggcga cctggttggc cgtcggccac tccaggaagt acgccacgtt caactcggac
     2101 agcgactcgg ccggagcctc ggtcgctgcc ggagcctcgg tcgctgccgg agcctcggcc
     2161 gctgccggag cagctgcgtc atcgtcgctg ccgcatgccc ccgcaaccaa agtaagggcc
     2221 gctagtacgg cgaccagacg aataattttc ttcaaggtga ttcccctcgt ttcgaagcac
     2281 ggccattcag ccgagcttcc cctccaatga ctaggtgact ttaatcacct agaaaccgaa
     2341 cgctcaactt gtcgcccatg acgattagac gacgatcccc gctagtcagc accccaaagg
     2401 cgcggcgggg cccaatacca agccccagaa gcctcggcca tgagggcaga actagatggc
     2461 cggcaccagg tgacaggcca ccccgtggcc gggagacact tcgcgccaga caggcacctc
     2521 actccggcac cggtcgacgg cttcgggaca ccgggtggag aacacgcaac ctggtggggg
     2581 tgacgagggg ctggggatat cgccttcgag cacaatcttc tcccgggtgg cctcggccgc
     2641 tgggtcggga acgggcgccg aggactgcaa cgcccgggtg tagggatgca acgggttgtc
     2701 gtagaggccg tcgacgtcgg ccaactccat gatccggccg aggtacatca ccgccacccg
     2761 gtcagcgatg tggcggatca tgccaaggtc gtgcgagatg aacaggtagg tcaggcccag
     2821 caggtcctgg agttcctcca tcaggttgac cacctgagcc tggatggaga catcgagggc
     2881 ggcaatcggc tcgtcgcaca cgatgagatc ggggttcagg gaaatggccc gggcgaggcc
     2941 gattcgctga cgctgcccac ccgagaactc gtgggggtag cggtttgcgt gctcagggtt
     3001 cagccctacc agtccgagta actcctcgac acgttcgttg cgttcacgcg acgtcatcga
     3061 gaggtgctcg actaggggct caccgatgat cgaactgacg gtcatccgtg gattgaggca
     3121 ggcatgcgga tcttggaaga ccatctgcat ccgcggccgg accttccgga gctccctggc
     3181 cgacaggtcg gccatgtcgc cgccatcgaa gaccaccgtg ccctccgtcg gctcctcgag
     3241 gcgcaggagt gtgcgaccaa tggtcgactt gcctgaccct gactcgccga ccagaccgag
     3301 ggtctgacca cgcatgattt cgaacgacac gccgtcgacg gcccgcacgg cgccgacctt
     3361 gcggcggagt gctcccttgg tcacaggaaa gtgcttcttc agatcacgga ccgagaccag
     3421 tacctcaggc acttcgggtg cctcaggtgc ctgttcctgc acgactgtca gctcagcgtc
     3481 catggccgac ctgccctttg gctgtctcgt cgctctgggc gccgaccagt actggcacct
     3541 cgttcagcca gcaggcgacc tttcgagtcg ccgaaacggc taccaggacc gggttctccc
     3601 ggtcgcatcg gtcgaaggcg tgcgggcatc ggggagcgaa tgaacaactg gcgggcgccg
     3661 accggagatc cggaggctgc ccctggatat tgaccagctt gtccccacgg gaggtggccg
     3721 acggtagcga agccaacagg ccctgtgagt acggatggcg gggctgggca tagaactcgt
     3781 cgaccggagc atcctccacg atctggccgc cgtacatgac cagcacccgg tcgaccaggc
     3841 cggccaccac gccgaggtca tgggtgatcc agatcaccgc catgccgagt tcctgccgga
     3901 ggcccttcac caactccagg atctgggcct gaatggtcac gtctagggct gtcgtgggct
     3961 cgtcggccac caagattttc gggttgcagg ccagggcgat ggcgatcatc acccgttggc
     4021 gcatcccacc ggacagctcg taggggtagc accggaggcg ctcctccgga gacgggatgc
     4081 caaccagttc caacagttca agcgcccgta accgcatcgc cttccggcga cccggttgat
     4141 ggacggtgag ggactccacg atctggtcgc ccacggtgac caccgggttc agcgatgtca
     4201 tcggatcctg gaagatgaag ccaaccttgc cgccccggac ctcccgcaga tccccgaagt
     4261 ccatcgaaag gaggtcgtcg ccctcgaaga tcgcctggcc ggccgagatc tcgccgggtg
     4321 gcgaggggat gagccgcagc agcgacatca tcgtgacgct cttgcctgag ccgctctcgc
     4381 cgaccacgcc gaccacctcg ccgtcggcca ggtcgaacga caccccgttg acggcgtgca
     4441 ctgtcccgtc ctgagtgttg aaccgcgtcg tcagatcagt gacccgcagg accggcgtgg
     4501 tgtccaccgt catcgattca agccccgagt ctgtcccaga cgtcctgttc ggccatgtcg
     4561 ataacggtgt acgccatgcc gagcgccccg tcacgcagag ccaactcgcc gccgggctcc
     4621 acggtccggt cggcgaactc gggctgatgg ttgaccgcgt cgccgcagtc catgccaagc
     4681 atcggatgga ttgacgggac gatctggctg acgttgccca tgtccgacga acccgagccc
     4741 ccaccctgtt cggcatgggt gggcataggg cgaccgatgg cctccgagtt gacggcgtac
     4801 agctcggtca tgacgtcgtt gtttcgcatg ctctcgtacg gatgggccgt ctcgtgccac
     4861 tcgaaccgac agccggtggc aatggccgcc ccctcgaagc acgccttcac cttgggaatc
     4921 aactcagcga gacgctccac gctgcccgag cggatcagcc actcagactt cgtatgcgac
     4981 ggcacgacat taacggcgtc gccaccgtgg gtcaccttgc agtggatccg atcgtcgtcg
     5041 accatggcct ggcgcagggt ggagatgttc acgtaagcct gcacgaaagc gtccagggca
     5101 ttgatccctt cctccggggc aaaggccgca tgggagtcct taccgaagaa ctcgacgtcg
     5161 tagtgctgac acgcctggaa ccacggatct agctcgtcgt aggggccggg gtggaccatc
     5221 atcgatgccg cggcgtcctc gaaagcaccg gcctctatca gctcgacctt gccgccacca
     5281 ccctcctcgg ctggggtgcc cagcacggta accctgatgc ccagctcctc ggccagcggc
     5341 gcgagggctg cgccggcacc aacggccgag gtggcgatga tgttatggcc gcaggcgtgc
     5401 cccacttcgg gcagggcgtc gtactcgcag cagatgacga cccgtggtcc gctggttcca
     5461 gcggtcgcct caaaggccgt gtccagtccg tgactgggat aggtcacgtc gaagccgttg
     5521 cgccccagga acgaactcag gcgttccgac gcctcgaact cctcgtatcc cagttcgggg
     5581 ttctcgtaca tccaccgaga gaggtcccgg agttcggttt cgaccttgcc aaaggctttt
     5641 cgtgccgcga ccttgcttgg accctcggtg atcgtcgtgt ccgtcatgcg acggaaggta
     5701 tcagccggtc agagatccag acgatagacg ttagttaatc gttcctcgaa gccaagccga
     5761 cgatagagcc ggttggcggc ctcccgggag gggcgcgacg tcaggtccac ggtggtggcg
     5821 ccctcacggc gggcccgttc gatagctgcc cggttcagcg cttcgccgac accgcggcgg
     5881 cgagcccctt cgtcgacgac cacgtcctcg atccaggccc gcaggcccgt cggaacatgg
     5941 aacagggcca gcgtcaggct ccccaggatc gccgcctcac cggtggtcgc cgggtcgacg
     6001 gccagcagca agatcgacgc gtcggacgac acgatgacct ccagcgccat ggcatccggc
     6061 ggcggattgg agctcgacag ttgtggaatg agccgggcca tggcacccag cagggcccca
     6121 tccacctctg tgacttcacg aacctcgacc ggggtcgcct ctcccttcga agattcctcg
     6181 tccggtgatc cagcatcctg cgttcccatg ggcggcgagc ctagaacccg gtcccggccc
     6241 gccagaggcg gacggagcgt gacggcaccg gcgcgccttg gagcgcgtct ggttagcctc
     6301 cggctggatg cccatcgact ccgctccgca cctcgctccg cacctctcgt ggcacgtcga
     6361 aaaactgccc atcaagttgc ggtcgccggt cctactggcc gccttcgagg gctggaatga
     6421 cgctggcgaa gccagctcta cggccgcccg ctacatccgg gaccactacg aagcggtcca
     6481 cgtagccacc atcgacgccg aggacttctt cgacttcacg gtggcccgcc ccagcgtctg
     6541 cctcgacgag gacgacgttc gccagatcgt gtggccgtcg acctcgatct acgtggcccg
     6601 ggtacccgac gccgaccacg acctggtgtg cgccatcgga cacgaacccc agttgcgttg
     6661 gcggaccttc gtggaccaca tcgcccatac cgccgaggtg ttcgatgcgg caatggtctg
     6721 cacgctcggc gctctactca ccgacgttcc ccacacccgt cccacgcagg tgtacggcgg
     6781 gactgaggat gcccgcctag ccgagcgtct tgacctgtcg ccatcgacct acgagggccc
     6841 gacgggcatc gtgggcgtgc tggccgccgg tctgcgggac cgaggcgtcg taacggcgtc
     6901 gttctgggcc agcgtcccct cgtacgtatc caacgccccg tctcccaagg cggccctcgc
     6961 tctggtggag cgcctctgcc gggtgttcga aatcgatgtg gcccgtaccg atttggaaat
     7021 cctggccgcc gactacgaac gccaggtcac cgaactggtc tccgaggacg acgggaccgt
     7081 cgagtacgtg gagcagttgg aggccgactt cgacgaagag acggctgatg ctccggaccg
     7141 cctggtggcc gaggtcgaag acttcctccg gaaccagccc ggcacctgag tcgtctccga
     7201 ccgagatccc gaccgacccg tgcggtaggt cagccgatac ccagatcagc ttcgagggtt
     7261 acgtctttct cagaagcggc ctctccctct gaagccgcat cgccctccca catgggctct
     7321 cggggatggt cgtagcggac ctccatcggt tcgccccgga tggcagcgaa ggcctcgtcc
     7381 acccactcgg ctggaagggc gtgcccctcg ggcatggagt cagccgcgaa gaagcccacg
     7441 tcgaggcact cgagcgggtg ggccgctagt tcgccgcccg tcatccgaca gtgaaagacc
     7501 agtgaataaa gcgggatgcc ggtgattccc aggcgaagcc cgtcgaggat ggcgatgggg
     7561 cgaaccacct cgcactcgat gcccgtctcc tcgaggactt ccttgaccac cacctcggca
     7621 ggtgagtagc cgacgtcggc ccacccggtg gggtacagcc acacgcccga cccggaccgc
     7681 tggaccagca acatctcgcc ggcatcgtta ccgaccaccg caccgacggt ggtcttgggg
     7741 gtgacgtatc ccctgacgcc agaacccacg gtgtcgtacc actcggccac aaggttgtcg
     7801 ggatccacgg tgcgtcccga cagggcgtcg gaccgggacc ggatctcggc ggctacgtgg
     7861 aggacctcct cgtagcgctc cttctcgtaa agcgactcgg tgaagcccat accggtgcgg
     7921 gccgacgccg agagcgcctc ggcccatcgc agcaggtcgg cctgaccggg gggcggaggt
     7981 acaccgggat cagagttcat ggatgcaccg taggcggacg acatgacgtg gttaacgacg
     8041 gggacccggc gggatcagaa atcgacggcc acccatcgca gcaccgacag ttccacctct
     8101 gcgaggtgct cggggtcggt gatcttggcg ccgaactgat cccgcacgta gaaggcgtcg
     8161 atcacgtccg atccgagggt ctggacgtgg gcccggacga tgtcaaggtc cagttcagcg
     8221 aaagcccggg tgatccgata cagcacgccg acaccgtcgg ggcacgtcac ctccagcacg
     8281 gtggcggtgg ccgacgagac gttgtcgacg gtcatagttg ggcgggctgg gcgagcggtt
     8341 aggtggatgg gtcggtaggt gcgcgaccgg tcaccgaggc gggccgccac ggccaggcgg
     8401 ccggccaggg cccggttgac ctgttcgtcg atccgcgccc agtcgggttc gccgcccagc
     8461 accgatccaa cacggaacac cgagagtgcc cgcccatgct cggaatgagc cgacgcacca
     8521 aggacatcag ccccgttgag ggctagcacg ccggccactt tggcaaacgt gcccgggcgg
     8581 tctgcggcca ccacggtcag ttccagcccc tctccacgca ccacgaacgt cccgtcgtcg
     8641 agcagggcct gctgggcagc atccggaaag gaacccccga ccacatcacc gacgtcgccc
     8701 ccacccaata cgtgggaggt tcgttccacc aactcacgga ctaggccggc cttccagttg
     8761 ctccatgccg acgggccggt agcgatcgaa tcggcttcgg tgagggcccc gaggaggccc
     8821 agcaacacgg ttccgccaac tgcatcagcc acctggcgga tagtgccgtt gtcgtcgagg
     8881 tcgcgccggg tggccacgtc gggcagcagc aggtggtgtt cgaccatggc gaccagcaag
     8941 tcgacgtcgt cgccctcata gcccattcgg gcggcaatgg tcgtcaggag gtcgacgccg
     9001 accaccgtgt ggtcaccggg ataaccctta ccgatgtcgt ggaacagggc accgaccagc
     9061 aacaggtcgg gccgctccac ctggccgacc agccgggacg cctcagccgc cgcctccatc
     9121 aggtgacggt ccactgtgaa ccggtggtag gcgttgcgct ggggccgtga acggcagggt
     9181 tcccattcgg gcaccagtag tacgaagagg cccacctggt cgaggtcctc gataaccgga
     9241 atggccgccg gtccggccgc caacaggtcg acaaacaagc cccgtgcctc ggcgggccac
     9301 ggcgcgggca gcggctcggc gtgatcggca aggcgttcca gagatccacg ctgcaggtag
     9361 gcgtcgtggc gggctgcact ggctgcgtac cgcagaacga gcagtgggtc gcccagatca
     9421 gcatcatcgg tcaactcgag gcggccgtca tcgagcacca ggccgggggc cacctcccgg
     9481 cgtcggattc cggaaagtgc cttcatcggt ccgcgtcgac gcgaggcccg caacgtacga
     9541 cgggcagcac cctcccccgt ccaggcaatg gtccggcccg ctgccgagac ctccgccatc
     9601 aggacgtcgg catcggctaa gcccagcgca gcagctacgt catcttggag ttccaacagg
     9661 agcttgtcgg ctcgctgacc ggtcagccgg tggagttcaa cacggacttc caacagcgtc
     9721 tcaaaggctg cggccaggcc ggccgactca gcctcacgca agatgggcac cgtggcctgc
     9781 tccacccaga acaagctgtg cacgtctcgc agaccgccgc gggcctcctt gatatccggc
     9841 tccagaagga acgccacctc accgaaccgg gcgtgacgct ccgcgaccgc cccctggagt
     9901 tggtcaagat tctggcgcga ccgtcccttc cactgggcca gcgcccgctc agccaagtcg
     9961 tcgaccagag cctctccgtc ggccgagcta gcagccacca ctcgggcagc cagcaggctg
    10021 gtggccgtct ccagattctc ggcgcccaca tcaagcaact gggccaccgt gcctacctgg
    10081 tggccgagct tcaggccggc atcccacagc ggataccaga ctcgttcggc gatgtcgccc
    10141 atatccatgc cggggatgtg caccaacgcc acgtccaggt cgctgcccgg gcactgctcg
    10201 ccccggccgt agccaccgac ggccaccagc gccaccccag gaggcacatc ggccgccgcg
    10261 aacactgcag ccagatagtc gtcaaagcgg ccagtcaacg cggcacagaa cgccggaccc
    10321 tggagggatc gatcgtccag taggtcggat atgtcgaaca cggtcacgtt cctgaccgtg
    10381 ggcccgaggt cgatcaggcc accaccgaac ccttggggcc ttcgttgtag gccgactcgg
    10441 cgtggatccg ctggtcgagt ccgaccacct cggtctcttc gtcgacccgg aggccgacca
    10501 ccgcgtcgat tgccttgacg atcacccagg tcatggcaaa cgagaagacc acgaccgaac
    10561 cgatggccac cgcctggtcc aagaagagct cgataccgcc accgaagaac aagccatcgt
    10621 cgaagccgcc gcccggtatg gcgctggagt cagcgaatag gcccagcagc agaccaccga
    10681 ggatgccgcc cacgccgtgg atgcccacca cgtcaaggct gtcgtcgaag ccgaaccggg
    10741 tcttgagggt cagggctaga tagcagacgc tgccggccag gaggccgaac acgatgccgg
    10801 ccagcccacc cacgtagcct gcggccgggg tgatggccac caacgcggcg accacgccgg
    10861 aggcggcacc caacgaggtg gcctgaccat cacgtagctt ttcggtggct agccagccga
    10921 ccatgccggc cgccgcggcg agaaacgtat tcaacagggc ctgcacggcc tggccattgg
    10981 ccgcaccggc cgatccggcg ttgaacccga accagccgaa ccacaggatg ccggtaccga
    11041 tcatcaccag cggcatgtcg tgcgggggca tggcctccgt cggccagccc ttccgcttcc
    11101 ccaggaccag aacgaaggcc agggcggcag ccgccgcgtt gacgtggatc gccgtgccgc
    11161 cggcgaagtc caacgctcca ttgccgtgct gccagccgct gtacacccag taggtgaccg
    11221 ggctgtagac cagcaccagc cagacgggca cgaacagcac ccacgccgag aacttgagtc
    11281 ggtcggccac cgctcccgag atgagcgccg gggtgatgga ggcgaaggtc attaggaagg
    11341 ccacgaacac caggccctcg gtgtcgccgg ccatgccctt gaggccgatg aagtcgaagt
    11401 tgccgatcca gtcgccaccg aagaagccgt ccccgtcggg cgagttgcca atcgagtacg
    11461 agaccagcac ccacacgatg ggcacgattc cgatgcagta catgttcatc atcaacatgt
    11521 tcagcacgtt cttagagcgg accatgccgc cgtagaacag ggccagtccc ggcaccatga
    11581 agacgacgag ggccgtgctg gtcaacatcc aggcaatgtc accagaatcc attggggggt
    11641 cctttcaggt tccgcgacgg gcgcgagatg tgggtggtcg gtcgacaggt tgaccgctgt
    11701 gcatcacggc atggtcacgc cagtgtttca ggacggtgaa ctgttccggt cagacgaccc
    11761 gtcgctcagg aagatccatc tccctcgagg tgacgtcgac ggtgaacgaa ggccttggct
    11821 gcgccccacg ccaggccggg gccctgcaga tcaggatgaa cgtcggcaaa cgaggagggc
    11881 gtcaggtcgt agagatcgtc ggggaacatc cggacggcat cgccgtcgcg gtccaccggc
    11941 ggaacaccgg cagtccgcag cagctcggtc gggaatcgaa cggcgtcgcg cagtacggcc
    12001 agcggtccgg tccactgctc gtcgacgtcg gcatccagca gggcccgcaa acgctccccc
    12061 acctcgtcgg cagccctacg gcctgcatcg gctagccgct cggccggcac ctcgaccgtg
    12121 ccacccgccg gatcctcgct ccaggcctcc gcgacccggg acacgcactg ctccacccag
    12181 ccgggaaggg ccgccaccag tccgtcgacc agcacgtcag ccagctcggc aaggcgagcc
    12241 tcaggttccc gtggtggtcc aggatcaggc tccatcgggc cccagggcgg cgttgaggtt
    12301 gccggaccgc aggccctcga ggtccagggt gacgtagcga taccccgaac tggtcaccgc
    12361 ggccaccacg gcatcacggc gctcaaccac gtcggccagg cgatccgtcg gtacctcgat
    12421 gcgggccgtg tcgtcgtagt gacggacccg gaggccgtca aaaccaaggc gccgcaacgc
    12481 ggcctcggcc cgctcgacgc cggacaacac gccaacggtg acctcggtcc cgtagggcac
    12541 ccgcgaggcg agacaggcgg tggccggctt gtcggcggtc cgcaagccca aggcccgaga
    12601 ccgtgcccgg acgtcgtcct tggtcaggcc ggcttccacc aggggaaagc gtgctccccg
    12661 gtcggccgca gccttctggc cgggccggtg atcgcccaga tcatcgacgt tgacaccgag
    12721 caccacggtg gccgactcgg cgactgcgat gggggccagc acgtccatga gggcgtcttt
    12781 gcagtgggca cagcgatcgg cgtcgttggc ccggtaggca gcgtgggtca tctcgtcggt
    12841 ctcaacggcc gaccaacgca ggccccactc gtcggccaac gacgcagcgt cggcccgttc
    12901 gtcgctggcc aacgacggcg acacggcggt gaccacgtgg acccggtcgg ggcccaacaa
    12961 tgtgtgggcg gcgtgggcca gcagcgccga gtcggcaccg ccggaaaagg ccaccaccac
    13021 ccggtccaga tcgcgcagga cccgatgcag cgcctccgac ttcagggcac tcggctccga
    13081 cacgtccaga cggcgcatgt cgggttccga aaaggcgggg accgatccca tggtcaggtg
    13141 cagccaaccc gcttcagcac gacgtccagc tcgtcgacca tgccggcgta gaaggctccg
    13201 aactgaccga agcgggccga agcccggtcg tagcgcatcg tgtagacgac gtccttgagg
    13261 tcatcggggt gctgtccgaa cagggtcacg ccccactcga aatcgtcgat acccgtcgag
    13321 ccggtgacca cctggaggat ccgtccggca aaggtccggc ccgacgtgcc gtgctccatc
    13381 atcagttcgt gtcggtcgtc gtagggcagc tcaaaccagt tggcgcccac gtcacgactc
    13441 ttggacatcg ggtagaagca ccatgccggc atgccctcgg gcggcagaac cgggtagagg
    13501 cgggcccgct tcatctcgtc gggaacaccc tgggcgtatt ccgacacctc ggtgaggctg
    13561 aggtagctat cgaccaactc gaggccggcg gccaccaggg cggtctgtag ggccctgagc
    13621 cgccacaggt cggtcccgag cgtcatgacg gccacatcgg ccttgtggcc gagaatggcc
    13681 acggggacga cctggtcgcc agcctcggtg gccgcgtcga cggcgacacg aacggcggca
    13741 gcgtcgcttt ggccgcacac cttgaggaac aggtggagaa cggccaggcc gtcggagggg
    13801 gaaacgggtt cgctcatcgc ggcgagtcta gggagcggcc ctgccggccc tctcagtcgc
    13861 cggtgtagag gttgagccgg tcgccgcggg cgaagccggc cagttgaagg ttggcggtcc
    13921 gggccgtctc gacggcgagt gccgatggtc cgctgaccgc caccaggctg gcgaacccgg
    13981 cggcccacgc cttctgggcc atctcgaacg aggcccggcc actgacccac aggcctagat
    14041 cgccggccgg caggagaccg tccatgtgaa gccgacccac caccttgtcg accgcgttgt
    14101 ggcgaccgat gtcctcacgt agcagtaacg gctgaccctt gcggtcgaag gccacggcgg
    14161 cgtgcacggc cccggtggtc gagaagagag cctgaccgtc gatgtggtcg gtcatggcgg
    14221 caagcacctc gacgtcgaag ggttcgacgt cgagtgggcg aaggcgttca cgcagttcgt
    14281 cgatggccac cgttccgcaa ataccgcagg acgacgaggc ggggccgagc cgaggcgtgg
    14341 ggacgggcgc ccgaccaccg gtgtccacgg tgacgtcgtt gtactcggcc tccgacgcca
    14401 acccctgtcc gc
//
LOCUS       DASCMR010000019         2170 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000123095, whole genome shotgun sequence.
ACCESSION   DASCMR010000019 DASCMR010000000
VERSION     DASCMR010000019.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2170)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2170)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2170
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000123095"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(183..1589)
                     /gene="tig"
                     /locus_tag="QGG16_00390"
     CDS             complement(183..1589)
                     /gene="tig"
                     /locus_tag="QGG16_00390"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005854 - nascent polypeptide-associated
                     complex [Evidence IEA];
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0051083 - 'de novo' cotranslational protein
                     folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HJP23766.1"
                     /translation="MDTTLETLDGDRVKLTVAVDETEFDVAVDAAFKRIAKEIRLPGF
                     RPGKAPRKLLEARIGVAAGRQEALQQALPDYYGRALAENEVDAIDQPEIEITGGAEDG
                     PLTFDAVVPVRPRAAVAGHGSLRVEIQAIEASDDDVTEQLDAIRRQHATLADTDRPAD
                     DGDQVTIDIEGSVDDEVVEGLTTSDYLYEVGAGAVVPEIDENLRGASAGDALEFDADH
                     PEEDDATLSFRIEVKAVQTRVLPDADDAFAAEASEFETIEELTADLRDRITTMRRGQA
                     GMTARDRTAQALADLIDMEIPPTLVESEIDGRINDMAMRMSSQGIDFATYMEAMGRDL
                     ATMRDELREGAEIAARVDLGLRAVADAESLSGEGEALDEYLQLLAEQTGGDVDGIRKA
                     LTSSGRMLEVKADIRKQAALEWVFERASIVDEEGNEVDRALLEPPEPVDEPEMAIPAT
                     DDEVGETSDPTPDGDEEE"
     gene            complement(1662..>2170)
                     /locus_tag="QGG16_00395"
     CDS             complement(1662..>2170)
                     /locus_tag="QGG16_00395"
                     /inference="COORDINATES: protein motif:HMM:NF012503.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HJP23767.1"
                     /translation="DPHKWLFAPFDCCALVYRQPEVARLAHTQHASYLDPINSDSEWN
                     PTDYGHFLTRRARGLPFWFSLAVHGTKAYSEAVERTLEVTRAGAELVAAAPHLDLILD
                     PVLSVLAFRRTGWEQMDYDAWSAQLMEEGTAFVVPTQVDGEPALRICIVNPLTTVDDI
                     AVVLDSLA"
BASE COUNT          352 a          709 c          698 g          411 t
ORIGIN      
        1 cggcgtgccg atgaagacaa tgttctcctt gagtaggcgc gaatagaggt cgaatgcccg
       61 ctcgccccgg ttggtctgct cgaccaccgt gggaaccaga tagttctgca cccgcatcgc
      121 cgcgaggccg cctacaccag gcacgccgtc gctggagatc tggatcgctt cggtcatttc
      181 gctcattctt cctcgtcccc gtccggggtc ggatcactag tttcccccac ctcgtcatcg
      241 gtggcgggga tggccatctc gggttcgtca acgggctcgg gcggctccag gagcgcccga
      301 tccacctcgt tgccctcttc gtccacgatt gaggcgcgct cgaacaccca ttccagcgcc
      361 gcctgctttc ggatgtcggc cttgacttcg agcattcgac ccgaggacgt cagggccttt
      421 cggatgccgt cgacatcgcc tccggtctgc tcagcgagaa gttgaaggta ctcgtcgagg
      481 gcctcccctt cgccgctgag actctcggca tcggccaccg cccgtaggcc gaggtcgaca
      541 cgggcggcaa tctcggcacc ttcccgcagt tcgtcgcgca tggtcgccag gtcgcgcccc
      601 atggcttcca tgtaagtagc gaagtcgatg ccctgggagc tcatcctcat ggccatgtcg
      661 ttgatccgac cgtcgatctc gctctccacg agggtgggcg ggatctccat atcgatgagg
      721 tcggcgagcg cctgggcagt ccggtcgcgg gccgtcattc cggcctggcc gcgacgcatc
      781 gtggtgatcc ggtcccgaag gtcggccgtc aactcttcga tggtctcaaa ctcggaggcc
      841 tcggcggcaa aggcatcgtc ggcgtcgggt agcactcggg tctgaacggc cttgacttca
      901 atgcggaacg acagcgtggc gtcgtcctcc tcgggatggt cggcgtcgaa ctcgagggcg
      961 tcgcccgccg atgcgccccg caggttctcg tcaatctcag gtaccaccgc accggcgccc
     1021 acctcgtaga ggtaatccga ggtagtcaga ccctcgacga cctcgtcgtc gaccgaccct
     1081 tcgatatcga tggtgacctg atctccatca tcggccggtc ggtcggtgtc ggccagggtg
     1141 gcgtgctgtc gccggatggc gtcgagttgc tcggtgacgt cgtcatcgga tgcctctatg
     1201 gcctggatct cgacgcgcaa cgaaccatga ccggccaccg cagcccgggg gcgcaccggc
     1261 acgacggcgt cgaaggtcag cgggccgtcc tcggcaccgc cggtgatctc aatttcgggc
     1321 tgatcaatgg catcgacttc gttctcagcg agcgctcgtc cgtagtagtc gggaagcgcc
     1381 tgctggagag cttcctgacg gccggcggcc accccgatac gagcctccag aagtttccgg
     1441 ggcgccttcc cgggccggaa acccggaagg cggatctcct tggcgatgcg tttgaaggcg
     1501 gcgtcaacgg ctacgtcgaa ctcggtctcg tcgacggcga cggtcagttt gacgcggtcc
     1561 ccgtccaggg tttcgagggt ggtgtccaca gtctcgggag tgtaccggcg gccccctgac
     1621 ggccacccgg cgaaatggcc ccctgatagg gctcgaaacc gtcaggcaag actgtctagg
     1681 accacggcaa tgtcatcgac cgtagtcagc gggttgacga tgcagatccg cagtgccggc
     1741 tcgccatcca cctgtgtcgg gaccacgaag gcggttccct cctccatgag ctgagcggac
     1801 caggcgtcat agtccatctg ttcccagccg gtcctcctga atgccagcac cgagaggacc
     1861 ggatccagta tcaggtccag gtggggagca gcagccacca actcggctcc cgcacgggtt
     1921 acctccagcg tccgttcgac ggcttcggag tacgccttgg tgccatggac cgccagcgag
     1981 aaccagaacg ggaggccccg ggcccgccgg gtcagaaaat gtccgtagtc ggtgggattc
     2041 cactccgagt ccgagttgat tggatctaga tagctggcgt gctgggtgtg ggccagtcgg
     2101 gccacctcag gttgacggta gaccagtgca cagcagtcga agggggcgaa gagccacttg
     2161 tgggggtcga
//
LOCUS       DASCMR010000020         5843 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000126709, whole genome shotgun sequence.
ACCESSION   DASCMR010000020 DASCMR010000000
VERSION     DASCMR010000020.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5843)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5843)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5843
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000126709"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(168..2171)
                     /gene="thrS"
                     /locus_tag="QGG16_00400"
     CDS             complement(168..2171)
                     /gene="thrS"
                     /locus_tag="QGG16_00400"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012229421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004829 - threonine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006435 - threonyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HJP23768.1"
                     /translation="MPDLTITLPDGSQRTLPEGATGADLAADIGPGLAKAAVIVSVDG
                     EGRDLGRPLADGDAVSVVTADSDEGLHTLRHSTAHVLAQAVLDLWPGATHAIGPPIED
                     GFYYDFELPDGASFTADDLAAIDARMREIIDADQPFERFEAGATEALELFADHRYKRE
                     IIEKVTAGGADPEMAGEASNDGSVSWYRNGEGFVDLCTGPHVASTGRLGHFALQKVAG
                     AYWRGDEKQPMLQRIYGTAWADKKALKGYLHRLAEAEKRDHRRLAAELDLVSWPDSLG
                     PGLAVWHPKGALVRKIIEDYSRARHETGGYDFVFSPHIAKSVLWETSGHLDFYADGMY
                     PPMELDGASYYPKPMNCPFHVAVYQSSQRSYRDLPRRFFELGAVYRYELSGAIHGLLR
                     SRGFTQDDSHIFCTPDQIPDELASLLEFTLSVLRAFGFEDFQAKLSTRPDEKSVGDDA
                     LWDMATDGLRQALESAGLDYVVEEGGGAFYGPKIDVDVTDAIGRPWQLSTIQLDFNLP
                     ERFDLEYVGDDGGRHRPVMIHRALMGSIERFFGVLLEHYAGAFPLWLAPEQVRVLPVA
                     DEHQAYAESVRDRLVAAGRRATVDPADEPLGKRVRAGKVGKIPHVLVVGDDDAAHGTV
                     GDNARGAAAPERDLSLDVFLVRLADAVESGALVASGPAGETKP"
     gene            complement(2181..2837)
                     /gene="npdG"
                     /locus_tag="QGG16_00405"
     CDS             complement(2181..2837)
                     /gene="npdG"
                     /locus_tag="QGG16_00405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent F420 reductase"
                     /protein_id="HJP23769.1"
                     /translation="MEIGLLGATGPAGQALAARLAGVGHDVVVGSRSKYRAMEVRDAI
                     LDKWPDRSLSIRSADNSGAADAEVVVIATPWDAAAATARSVADHLHRKVVICMSNAIA
                     QVAGEFQPLVPPRGSVSASVQAEVPDAYVAAALHHVAATELGNLDTALASDVLVCSDH
                     QRATETASEIIAKIPGARPLDAGGLSNAMAIEAFTAVLLQLNSRYRTRVAVRLTGIDD
                     "
     gene            2927..3694
                     /gene="fabI"
                     /locus_tag="QGG16_00410"
     CDS             2927..3694
                     /gene="fabI"
                     /locus_tag="QGG16_00410"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004318 - enoyl-[acyl-carrier-protein]
                     reductase (NADH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HJP23770.1"
                     /translation="MGILDDKKLLITGVLTDASLAFSVARLAQEQGAEVILTGAGRGL
                     RLTERTARKLPLEAEVLEFDVTSAEQAESLRRHLADRWGRVDGALHAIGFAPEVCLGE
                     DFMAAQWSDVAVAMEISAYSLKTVAEVVAPLMTNGGSIVGLDFDARFAWPAYNWMGVA
                     KAALESASRYLARGLGPDGVRVNMVAAGPIRTIAAKSIPGFSEFEESWEKRAPLGWDV
                     NDTEPVARACVALLSDWFPATTGSIVHVDGGYHAIGA"
     gene            complement(3707..4615)
                     /locus_tag="QGG16_00415"
     CDS             complement(3707..4615)
                     /locus_tag="QGG16_00415"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HJP23771.1"
                     /translation="MHRRLGMTVVLAGLVTALLSTAVQAAPPAGRSDPAGSGSASKSV
                     AFTSDPSQDLVIDRATGLLPLISAASDVIPLALDGIAAAERRLRTMIDLLVSARQRHR
                     SAVRAFADANRLVADNVRDAAQLQSGYGDVLAGISATERARLERDAKGRRNRSSVVRQ
                     ATSSDWVCPVEGRVKFYDSWGERRSGNRRHEGVDLVSFRNAPILAPVDGVVTHRWDTI
                     GGWSFDLVAGDGDYYFGTHMSGFGKVGEVRAGEVIGFMGDTGNAEGVHLHFEYHPGGR
                     ENAVNAYPIVDSRCSNRTPMDTSLYD"
     gene            complement(4678..5751)
                     /locus_tag="QGG16_00420"
     CDS             complement(4678..5751)
                     /locus_tag="QGG16_00420"
                     /inference="COORDINATES: protein motif:HMM:NF013741.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HJP23772.1"
                     /translation="MVTALALCSVLLLVAVNALFVATEFALVAARPTVLADAAEGGSR
                     AASRALRARRDLRLQMSGAQLGITASSIALGVLAEPAIGGLLENLFSAVAVPEEAADT
                     ASWVAAIGLAAVIQMLFGELVPKNLAIAAPERTLRWTVTLHAAFVSLAKPAVVALDRM
                     SALLIRPFGLTAVDEVHRAVGAPELTSMLDASRREGLIDGFEHDLLSGALDLGQRTVA
                     SVMVPRSEVATVDRWAPVHEVERVLASSGHSRLPLTGPDGGLVGLVHARSVLRLPVGA
                     ADDTLTTEEVRTMAVLSPDQPLDEVLHLLQRERIRLAAVIGTEGWIGIVSLEDVLEEL
                     VGDIRDETDGYSAGEIDPSTMST"
BASE COUNT          985 a         1954 c         1922 g          982 t
ORIGIN      
        1 cgtaagcccc cgatccagct ccagagtctc gtcgtcggga tggtcgccat cggccagcac
       61 ctcgaacagt gtgcggccct cgccgtcatc aaggggcgcg tcggactcct cgttcagtcc
      121 cgacacatag gcgtgtcgcc agccggccca caggcgatcc agaccggtca gggcttggtc
      181 tcccccgctg gccccgaagc caccagcgca ccggactcca ctgcatcggc cagccggacc
      241 aggaacacgt ccagcgaaag gtcacgctcg ggagcagcgg caccccgggc gttgtcgccc
      301 accgtgccgt gggccgcgtc gtcgtcaccc accacgagca cgtgggggat cttcccgacc
      361 ttgccggccc gtactcgctt gcccagcggc tcatctgccg ggtccacggt ggcccgtcgt
      421 ccagcagcca ccagacggtc gcgtaccgac tcggcgtagg cctgatgctc atcggccacc
      481 ggcagcaccc gcacctgctc gggagccagc cacagcggga acgcgcccgc gtagtgctcc
      541 agcagcacgc cgaagaaccg ttcgatcgac cccatcagcg cacggtggat catcaccgga
      601 cggtgccgac cgccatcgtc gcccacgtat tccaggtcga aacgttccgg gaggttgaag
      661 tccagctgga tggtcgataa ttgccagggt cgcccgatgg cgtcggtgac gtccacgtcg
      721 atctttggcc cgtagaacgc accgccaccc tcttcgacca cgtagtcgag gcctgccgac
      781 tccaacgcct gccggagccc gtcggtggcc atgtcccaca gggcgtcgtc acccaccgac
      841 ttctcatcgg ggcgggtcga caacttggcc tggaagtcct cgaagccgaa ggcccgcagc
      901 acgctcaggg tgaactccaa cagcgaggcc agctcgtcgg gaatctggtc gggcgtgcag
      961 aagatgtggc tgtcgtcctg agtgaatccg cggctccgaa gcaggccgtg gatggccccc
     1021 gaaagttcgt agcggtacac ggctcccaac tcgaaaaacc ggcggggaag gtcccggtag
     1081 ctgcgttggg agctctggta gacggccacg tggaatggac agttcatggg cttcgggtag
     1141 tagctcgccc cgtccagctc catgggcggg tacatgccgt cggcgtagaa gtcgaggtgc
     1201 ccactggtct cccacagcac tgacttggcg atgtggggac tgaagacgaa gtcgtagccg
     1261 cccgtctcgt gacgggcccg gctgtagtcc tcgatgatct ttcgcaccag agcacctttg
     1321 gggtgccaca cagccagtcc gggtccgagc gaatccggcc aggacaccag gtccagttcg
     1381 gcggccagcc ggcggtggtc gcgtttctcc gcttcggcga gacgatgcag gtaccccttg
     1441 agtgccttct tgtcagccca agcagtgccg tagatgcgct gcaacatggg ctgcttctcg
     1501 tcaccccgcc agtaggcgcc ggccaccttc tgcaacgcga agtggcccag tcgcccggtg
     1561 gacgccacgt ggggcccggt gcagaggtca acgaaaccct ctccgttgcg ataccaggag
     1621 accgatccgt cgttcgatgc ttcgccggcc atctctgggt ccgctccacc ggccgtgacc
     1681 ttctcgatga tctcccgctt gtagcggtga tcggcaaaga gctcgagtgc ctcggtggct
     1741 cccgcttcga atcgctcgaa gggttggtcg gcgtcgatga tctcccgcat ccgggcatca
     1801 attgccgcca ggtcgtccgc ggtgaaggaa gcaccgtccg gaagttcgaa gtcgtagtag
     1861 aagccatcct ctatgggcgg gccgatcgcg tgggtggcgc ccggccagag atccaagacg
     1921 gcctgggcca gcacgtgggc ggtggaatga cgcagcgtgt ggaggccctc atcactgtcg
     1981 gcggtcacca ccgagacggc gtcaccatca gccaacggtc gaccgaggtc acggccctcg
     2041 ccgtcgacgc tgacgatgac cgccgctttg gccaggccgg ggccgatgtc tgccgccaga
     2101 tcggcgcccg tggcaccttc gggcagagtg cgctgcgaac cgtcgggaag ggtgatggtg
     2161 agatcgggca cgaaagggtc tcagtcgtcg atgccggtca gccgaacggc cacccgggtc
     2221 cggtaccggc tgttgagctg caacagtacg gcggtgaagg cctctatggc catggcgttg
     2281 gataggccgc cggcgtccaa cggtcgggct cccgggatct tggcaatgat ctctgaggcc
     2341 gtttcggtag cccgctggtg gtcagaacag accagtacgt cgctggctaa tgcggtgtcc
     2401 aggttgccta gctcggttgc tgccacatgg tgcaaggcgg ccgccacgta ggcatcgggc
     2461 acctcggcct ggacgctggc cgataccgac ccgcgcggcg gcactagcgg ctgaaactct
     2521 ccggccacct gggcaatggc gttggacatg cagatcacca ccttgcggtg aaggtgatcg
     2581 gccaccgacc gggcggtggc agcagcggcg tcccatgggg tggcgatcac cactacctcg
     2641 gcgtccgcgg cacccgagtt gtcggctgat cggatcgaga gcgaccggtc gggccacttg
     2701 tcgaggatcg cgtcccgtac ctccatggct cggtacttcg agcgtgaccc gaccaccacg
     2761 tcgtgtccca ctccggccag ccgtgcagcg agggcctgtc cggcggggcc tgttgctccg
     2821 agcagtccga tctccatccg gcgaggctac cggggtcgtc cggtagcctc cgaatcggtt
     2881 ccccgacgag tgcgtcggtt tcccaacaga caaggacgga ttccacgtgg gcatcctgga
     2941 cgacaagaag ttgctgatca ccggcgtact taccgacgct tcgctggcct tctccgtagc
     3001 ccgtttggcc caggagcagg gcgccgaggt gatcctgacc ggcgctggac ggggccttcg
     3061 cctcactgaa cgcacggcac gtaagttgcc cttagaggcc gaggtcctgg agttcgacgt
     3121 cacgtcggcc gaacaggccg agtccctccg gcggcatctg gctgatcggt ggggccgggt
     3181 ggacggagcg ctgcatgcca tcggattcgc ccccgaggtg tgccttgggg aggacttcat
     3241 ggccgcccag tggtcggacg tggcggtcgc catggagatc tctgcatact cgctcaagac
     3301 ggtggctgag gttgtcgcac cgctcatgac caacgggggt tcgatcgttg ggctggactt
     3361 cgacgcccgg tttgcgtggc ctgcctacaa ctggatgggc gtggccaagg cggctctcga
     3421 gtctgcgtcg cgctacctgg cgcgggggct cggacccgat ggcgtccggg tgaacatggt
     3481 ggccgccggc cccatccgca ccatcgccgc caagagcatc ccgggtttct ccgagttcga
     3541 ggagtcctgg gagaagcggg cgccgctggg gtgggacgtg aacgacaccg aacccgtcgc
     3601 tcgggcgtgc gtggcgctcc tgtcggactg gttcccggcg actaccgggt cgatagtcca
     3661 cgtggatggc ggttaccacg ccatcggcgc ctgagttcgt agggcctcag tcgtagagag
     3721 acgtgtccat gggcgtccgg ttgctgcagc gggaatccac gatcgggtag gcattcacgg
     3781 cgttttcacg accacccggg tggtattcaa aatgcaggtg cacgccctcg gcgttgccgg
     3841 tgtctcccat aaatccgatc acctctccgg cccggacctc accgactttt ccaaatcccg
     3901 acatgtgggt tccgaagtag tagtcgccat ccccggccac caggtcaaag gaccagccac
     3961 cgatggtgtc ccaccggtgg gtgaccacac catccaccgg tgcaaggatc ggggcgttcc
     4021 tgaagctcac taggtccacg ccctcatggc ggcggtttcc cgaccttcgc tcgccccaag
     4081 aatcatagaa tttgacgcga ccttcgaccg ggcagaccca gtccgacgac gtcgcctgac
     4141 gaaccactga cgagcggtta cgtcggcctt tagcgtcgcg ttcgaggcgg gcacgttcgg
     4201 tggcggagat gccggcgagg acgtcgccat aacccgactg caactgagcc gcatcccgca
     4261 cgttgtcggc gaccagtcgg ttggcgtccg cgaacgcccg gaccgccgaa cggtggcgtt
     4321 gccgggcgct gaccagcaga tcgatcatgg ttcggagtcg tcgttcggcg gcggcgatgc
     4381 cgtccaaggc caggggaatt acatcggatg ctgccgagat aagcggtagc aggccggtgg
     4441 ctcggtcgat gaccagatcc tgggatgggt cgctggtgaa agccaccgat ttcgaggcac
     4501 tacccgaacc ggcgggatcc gatcggcccg cggggggcgc ggcctgaaca gcggtcgaaa
     4561 ggagggcggt gaccagcccg gcgagcacga cggtcatgcc aaggcggcga tgcaccccga
     4621 aatcctaccg gcgggcttcc gatgcctgat ggaccggtga ccaccgaccg tggctactca
     4681 cgtgctcatc gtgctgggat cgatttcacc agccgaatac ccgtcggtct catcgcggat
     4741 gtctccgacg agttcctcca agacgtcctc cagggacacg atcccaatcc agccctccgt
     4801 gccgatcacg gcagcaagac ggatccgttc tcgctgcaga agatggagta cctcgtccag
     4861 cggttggtcg ggcgacagga cggccatcgt cctgacctcc tcggtggtca gggtgtcgtc
     4921 ggccgctccg accggtaggc gtagcaccga tcgggcgtgc accaggccca ccaggccacc
     4981 atctgggccg gttaacggca gccgactgtg gcccgaggag gccaatacgc gttctacctc
     5041 gtggaccggg gcccaacggt cgaccgtcgc tacttcggac cggggcacca tcaccgatgc
     5101 cactgtccgc tgccctaggt ccaacgctcc cgacaggaga tcgtgttcga acccgtcgat
     5161 gaggccctcg cgccgtgacg catccagcat tgacgtgagc tccggggccc ctaccgcacg
     5221 gtggacctcg tcgacggccg tcaggccgaa tgggcggatg agtagcgccg acatccgatc
     5281 gagggccact accgcaggtt tggccagaga gacaaatgct gcatgcaggg tcaccgtcca
     5341 ccggagcgtg cgttcgggag ccgcaatggc caggttcttg ggtaccaact cgccgaacaa
     5401 catctggatc acggctgcca ggccgatcgc tgccacccaa gacgccgtgt cggccgcttc
     5461 ctcggggacc gcgaccgctg agaacagatt ttccagcagg ccgccgatcg ccggctcggc
     5521 gagcaccccg agggcgatgc tgctggccgt gattcccaac tgggcacccg acatctgcag
     5581 acggaggtcc cgccgggccc ggagcgcccg ggatgccgct cgcgatccgc cctctgccgc
     5641 gtcggccaac accgtcggtc gagcagccac cagcgcgaac tccgtcgcca cgaagagagc
     5701 gttgacggcg acgaggagca ggacactgca caacgccagc gcggtcacca tcggtgactc
     5761 cccggttcgg cctcagtctc gggcggcgac ggcgcggggg ccaccattct gagcgtttcg
     5821 atccggcgac cgtcgacagc cag
//
LOCUS       DASCMR010000021         3856 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000136392, whole genome shotgun sequence.
ACCESSION   DASCMR010000021 DASCMR010000000
VERSION     DASCMR010000021.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3856)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3856)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3856
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000136392"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(62..1144)
                     /locus_tag="QGG16_00425"
     CDS             complement(62..1144)
                     /locus_tag="QGG16_00425"
                     /inference="COORDINATES: protein motif:HMM:NF012335.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HJP23773.1"
                     /translation="MQGLIQEGDGEEHVRLSNDLEHAAALGSRQVRVEIMAAGVCGSD
                     LSCVHGKYYMPTPLVPGHEAAGVVAEIGSAVTYCAVGDHVVLSTFGNCGHCPTCEGGD
                     PGNCGFGGLRHTHTEGDQALWGFANLGAFAQETIVHENQAVPIPTEVPMASAALIGCG
                     VMTGAGAVFNRAKVGIGDTCVIIGAGGVGLNVIQAAHLSGASQIIAMDRVASKERMAL
                     DFGATDFVLVDGDDFDSVAAVQQLSGGGVDHAFEVVGNTNLLADCISMAKAGGNVCAV
                     GVPDLTATVTYPFQALHQNKNLMGIRAGGGKPRRDFRLIADLYLKGRFKLDELVSHTA
                     GLDGLQGAFDGLKAGAEARTVLLPNG"
     gene            complement(1322..2098)
                     /locus_tag="QGG16_00430"
     CDS             complement(1322..2098)
                     /locus_tag="QGG16_00430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJP23774.1"
                     /translation="MTTVFVHGNPETDAIWSDLVGELADRPPVGGNARDLVLLSPPGF
                     GAPLSDGWGATREEYRDWLITEVEVLAAEGPVDIVGHDWGAGHVFGLLAERSDLVRSW
                     ACDCLGLIHPDYVWHDMAQLWQTPEVGEEVIQGMRAASRDERITMMMTSGMNEHAATD
                     VADALDTMADCILPLYRSGAQPVVGNLGRELAAIDLPPGLALDPSEDPYVGPAGRAAQ
                     MADQLGARHAPLDGAGHWWMSEQPAVAADLLVEFWGSLDT"
     gene            complement(2150..3586)
                     /locus_tag="QGG16_00435"
     CDS             complement(2150..3586)
                     /locus_tag="QGG16_00435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase"
                     /protein_id="HJP23775.1"
                     /translation="MIRRPNVILINCDDLGYGDLSCYGSTQHDTPALDRMADEGVRFT
                     DFYMASPVCSPSRAAMLTGSYPLRVGFGGRSIDNAPVLFPGQAQGLHPDEITIARLLQ
                     DGGYATRIIGKWHCGDQPEFLPTRHGFDGWFGLPYSNDMGRQAFPQEGQPYRKVMESL
                     GTPLPDDAPMFQPRPPLPLMLDEDVVAEQPDQAALTERYVTDAVQFLRNNRDRPFFLY
                     LAHLYVHLPIYVQTRFVRESRNGRYGAAVRCIDWSTDVILRELQDLGLDDNTVVVFTS
                     DNGALTRDGGGSNGPLRASKGTTWEGGQRVPCIVRWPGRIPAGQVVSDVANAMDLYPT
                     IANWCGVDVPGDRTLDGQNLGPLLTGGDGPCERPFFFILGGNIEAVRVGRWKLHVRKW
                     NDERVRLYDLNADVGERADVVDEHPDVVTRLLDVIEAARLELGDDASDMVGSDVRPVG
                     VVADPVALTVFDEDAPYYMAEYDLPERG"
BASE COUNT          702 a         1208 c         1292 g          654 t
ORIGIN      
        1 ctgggaagga ttgggaaaga cggggacgga acgtgacgag gatgaaggcc ggggccccga
       61 ctcagccgtt gggtaacagc acggtacggg cctcggcgcc ggccttgagt ccatcgaacg
      121 cgccttgtag gccatcgagg ccagccgtgt gggacaccag ctcgtcgagt ttgaagcgcc
      181 ccttgaggta caggtcggca atcaggcgga agtcccgacg aggtttgccc ccgccggccc
      241 ggatccccat gaggttcttg ttctggtgga gggcctggaa cggataggtc acggtggcgg
      301 tcagatcggg tacgcccaca gcgcagacat tcccgccggc cttggccatc gagatgcagt
      361 ccgccagcaa gttggtgtta cccaccacct caaaggcgtg gtcgacgccg ccaccgctga
      421 gctgctgaac ggcggccacc gagtcgaagt cgtccccgtc cacgagaaca aagtcggtgg
      481 ccccgaaatc cagtgccatg cgttccttgg aagccacgcg gtccatagcg atgatctggg
      541 aggcaccgct gaggtgcgcg gcctggatca cgtttaggcc aactccgcca gcgccaatga
      601 tcacacaggt atcgccgata ccgaccttgg cccggttgaa cacggcaccc gcacctgtca
      661 tgacgccgca tccgatgagg gccgcagacg ccatcggtac ctcggtcgga atgggcacgg
      721 cctggttctc gtgaacgatc gtctcctggg cgaaggcgcc caggttggcg aacccccaga
      781 gggcctgatc gccctcggtg tgggtgtggc gcaggccacc gaacccacag ttcccagggt
      841 cgccgccctc acacgtcggg cagtggccgc agttcccgaa ggtggagaga acgacgtgat
      901 cgccgacggc gcaataggtg acagccgagc cgatctcggc cacgacgccg gcggcttcgt
      961 ggccgggtac cagcggggtg ggcatgtagt acttgccatg gacgcagctc aggtcactgc
     1021 cgcacacgcc ggccgccatg atctcgacac gtacctgtcg ggatccgaga gctgctgcgt
     1081 gctcgaggtc gttggagaga cggacgtgct cttctccgtc gccctcctgg attagtccct
     1141 gcatgatctg tgctccgttc ggacccgtga tcggtcgtcg acatcatccc gcccagtcga
     1201 cccgagggcc aacgcgtggt ctgttgggca gtaagaggag atgggcaaga tggtgaacga
     1261 atcgccacaa tcgtgaggcg acgtcggcct gctgtgatcc agatctctgg tcaacaccag
     1321 ttcaggtgtc gagtgatccc cagaactcca cgagtaggtc agcggcgacg gcgggttgtt
     1381 cagacatcca ccagtggcct gcaccgtcca ggggggcatg tcgtgcccca agctggtcgg
     1441 ccatctgggc ggcccgaccc gctggcccca cgtaggggtc ctcggatgga tcgagagcca
     1501 gccctggagg taggtcaatg gcggccagtt cccggcccag attgccgacg acgggctgag
     1561 cgcccgagcg gtacaggggc agaatgcagt cggccatggt gtcaagtgcg tcggcgacgt
     1621 cagtcgccgc gtgttcgttc atgccgctgg tcatcatcat ggtgattcgc tcgtcccggg
     1681 aggcggcacg catcccctgg atcacctcct cgccgacctc gggggtctgc catagctgtg
     1741 ccatgtcgtg ccagacgtag tcgggatgga tgaggcccag acagtcgcac gcccaggacc
     1801 ggacgaggtc ggagcgctcc gccaagaggc cgaacacgtg cccagcgccc cagtcgtggc
     1861 ccacgatgtc gaccggccct tcggctgcca gaacctcaac ttcggtgatt agccagtcgc
     1921 ggtactcctc gcgggtggcc ccccaaccgt cggaaagcgg cgcgccgaat cccggtggcg
     1981 aaagcaggac aaggtcgcgc gcgtttcctc cgaccggtgg gcggtcggcc agttcgccga
     2041 ccaggtcgga ccagatggca tcggtctcgg gattgccgtg cacgaagacg gtggtcatgg
     2101 ggatgggttc acttccgttt atggggcttg ggtctgtcgc gggaatagtt cagccgcgtt
     2161 cggggaggtc gtattcggcc atgtagtacg gggcgtcctc gtcgaacacg gtcagggcta
     2221 ccgggtctgc cactacgccc accggacgca catcagaacc gaccatgtcg gaggcgtcgt
     2281 cacccaactc cagccgggca gcctctatga cgtccagcag gcgtgtcacc acgtcaggat
     2341 gctcgtcgac cacgtcagcc cgttcaccga catcggcgtt caggtcgtac aggcggaccc
     2401 gctcgtcgtt ccatttgcgg acgtggagct tccatcgacc gacgcgtaca gcctcgatgt
     2461 tgccgcccag aataaagaag aatgggcgtt cacagggtcc atcgccgccg gtcagcagcg
     2521 gaccaaggtt ctgtccgtcc aacgtccggt cgccgggcac atcgacaccg caccagttgg
     2581 cgatggttgg gtagaggtcc atggcgttgg cgacatcgct caccacctga ccggcgggaa
     2641 tccggcctgg ccaccgcacg atgcaaggca cccgctggcc accctcccac gtggtgccct
     2701 tggatgcccg gagcgggccg ttgctgccgc caccgtcacg ggtcaatgcc ccgttgtcgc
     2761 tggtgaacac cacgacggtg ttgtcgtcca gaccgagatc ttgcagctcg cgcaggatta
     2821 cgtcggtgga ccagtcaatg catcgcaccg ccgctccgta gcggccgttg cgtgactcac
     2881 gtacgaagcg ggtctgcacg tagatgggca ggtgtacgta gaggtgggcc agatacagaa
     2941 agaagggtcg atccctgttg ttccggagga actggacggc gtcggtgacg taccgctcgg
     3001 tcaacgccgc ctggtcgggc tgctcagcaa ccacgtcctc gtcgagcatg agcggcagcg
     3061 gcgggcgcgg ctgaaacatc ggggcgtcat cgggcaacgg cgtaccgagc gactccatga
     3121 ccttccggta gggctggccc tcctgaggga aggcttgacg ccccatgtcg ttgctgtacg
     3181 gcaggccgaa ccagccgtca aagccgtgtc gcgtgggtag gaactcgggt tggtcgccac
     3241 agtgccactt gccaatgatc cgggtggcgt aaccgccgtc ctggaggagg cgggcaatcg
     3301 tgatctcatc ggggtgcagt ccctgggcct gacccgggaa gagcaccggc gcattgtcga
     3361 tgctgcgacc accgaagccg acccgtaagg ggtagctgcc ggtgagcatg gcagcccgtg
     3421 acggcgaaca gaccggcgac gccatgtaga agtcggtgaa acggacgccc tcgtcagcca
     3481 tgcggtccaa cgccggggtg tcgtgctggg ttgacccgta gcacgacagg tcgccgtatc
     3541 cgaggtcgtc gcaattgatg aggatgacgt ttggtcgtcg gatcatgggg ctgcctccac
     3601 gacgatcatc gtggccggaa cggttgcctg ccgaatcggc gacccagatc gctaattcga
     3661 atcgagatcc gaatcgaaga cggggaggcg ccaccactac ggtcgaccca tgagcgaaac
     3721 aggcagtgcg aaccagggaa ccagccaacg cgtggagatg gagtgggaga ccccgtcaca
     3781 cgacgagatc atcgagatct ccaaggggca cgtggccggc ctcgagatga ccgacgacga
     3841 tgccgtgtgg tgtgtg
//
LOCUS       DASCMR010000022         1813 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000137744, whole genome shotgun sequence.
ACCESSION   DASCMR010000022 DASCMR010000000
VERSION     DASCMR010000022.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1813)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1813)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1813
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000137744"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..785)
                     /locus_tag="QGG16_00440"
     CDS             complement(<1..785)
                     /locus_tag="QGG16_00440"
                     /inference="COORDINATES: protein motif:HMM:NF024581.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HJP23776.1"
                     /translation="MADHIPYAPTTGLTYDPSDPVYWDADALQGEVDRTFEICHGCRM
                     CFKYCDSFPSLFSFLDDRHDGNVRAVTDAETAQVMDQCFQCKLCEVQCPYTVRDSHEF
                     QLDFPKLVHRYKAQRARAEGLDLRDRVLGDPDRTAALARASGGLANVANTRSRIHRIF
                     LEKVLGVHRDKDLPRFARTTFTAWATRRGLVKDDPTEGEAVLFPTCYVEHNEPEVGHD
                     TVAVLERNGVDLTCEKGLACCGMPAWESGDLDTLRERATTNLNR"
     gene            complement(907..1323)
                     /locus_tag="QGG16_00445"
     CDS             complement(907..1323)
                     /locus_tag="QGG16_00445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rubrerythrin family protein"
                     /protein_id="HJP23777.1"
                     /translation="MSLDGSQTLENLKAAFAGESQANRRYLYFAKVADIEGYPDIAGN
                     FRDTAEGETGHAHGHLDYIKAVGDPATGLPIGDTVENLAAAVAGETHEYTEMYPGMAK
                     TAREEGHGDIADWFETLAKAEKAHAGRFQSLLDGVS"
     gene            complement(1476..1691)
                     /locus_tag="QGG16_00450"
                     /pseudo
     CDS             complement(1476..1691)
                     /locus_tag="QGG16_00450"
                     /inference="COORDINATES: protein motif:HMM:NF021758.3"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Rdx family protein"
BASE COUNT          296 a          549 c          638 g          330 t
ORIGIN      
        1 cggttgaggt tcgtggtggc ccgttcccga agggtgtcga gatcgcccga ctcccaggca
       61 ggcatgccac agcaggccag gcccttctca catgtcaggt ccacgccgtt gcgttccagc
      121 acggcaactg tgtcgtgtcc gacctcgggt tcgttgtgct ccacgtaaca ggtcggaaag
      181 agaacggctt caccctcggt cggatcgtcc ttgacgaggc cgcgtcgagt agcccaggcg
      241 gtgaaggtgg tgcgggcgaa gcgggggagg tccttgtcgc ggtggacccc cagcaccttc
      301 tccaggaaga tccggtggat ccgactgcgt gtgttggcca cgttggccag accacccgat
      361 gcacgggcga gggccgccgt tcggtccgga tcacccagta cccgatcccg taggtcgagc
      421 ccctcggctc tggcacgctg ggctttgtag cgatggacca acttggggaa gtccaactgg
      481 aactcgtggc tgtcgcgcac cgtgtacggg cactgcacct cgcagagctt gcactggaag
      541 cactgatcca tgacttgggc cgtctcggca tcggtgacgg cccggacgtt gccgtcgtga
      601 cggtcgtcta gaaacgagaa cagcgacgga aacgagtcgc agtacttgaa gcacatccgg
      661 catccgtggc agatctcgaa cgtccgatcg acctcgccct gcaacgcatc agcatcccag
      721 tacacggggt cggaggggtc gtaggtcagc cctgtagtgg gggcgtacgg aatgtggtcg
      781 gccacggtcg tgcttcctga gggggttacg tcaagtcggt ccagacctgg tcagacgcga
      841 cgcaccggcc gtcccgagcg gaacgaccgg tgcgacacgt gcagaatctg gacagtgggg
      901 ctgggctcag ctgactccgt cgagcagcga ctggaagcga ccggcgtggg ccttctcggc
      961 cttggcgagg gtctcgaacc agtcggcgat gtcgccgtgg ccctcttcac gggccgtctt
     1021 ggccatgccg gggtacatct cggtgtactc gtgggtctcg ccggccaccg ctgcggccag
     1081 attctccacg gtgtcaccga tgggcaggcc ggtggcagga tcgccgacgg ccttgatgta
     1141 gtcgaggtga ccgtgggcgt gtccggtctc gccttccgcg gtatcgcgga agttgccggc
     1201 gatgtcgggg tacccctcga tgtcggccac cttggcgaag tagaggtacc ggcggttggc
     1261 ctgagactcg ccggcgaagg cggccttcag attctcgagc gtctggctgc cgtcgaggct
     1321 cacaatggaa ctcctgattc tctggttgct gggggattcg ttcccggggg aacgtgtgtc
     1381 gacaatctag accgacgcca tccagatcgg gggccccaga acgggtttcg ggcaccggcg
     1441 tcgagcgaac agcgctgggc tagcagcggt gggcgctacc ccgggtcgta gcgggggacg
     1501 ttcggcccga cgtgggccgt gaacaggtcg agtatctcgc cgggttcggc gtgacggccc
     1561 gtctcggctt tcgagtagag gatggtgtcg tcgacgacca catcgaacac cccgttctca
     1621 ccggtcacca ggaccagatc atcgacgacg ttctggtagg tggccagtag gtctccagcc
     1681 gcgctcacgg cgcgggagga ataatctcaa gggacgcagt aggtgattcg gatgcggtgg
     1741 ctcatgactg ggaccctagg cgcagatgcc ggaagcgacc cggggcgcgg ccgggggcgc
     1801 ggcagtcggc tcc
//
LOCUS       DASCMR010000023         1756 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000140575, whole genome shotgun sequence.
ACCESSION   DASCMR010000023 DASCMR010000000
VERSION     DASCMR010000023.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000140575"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..365)
                     /locus_tag="QGG16_00455"
     CDS             complement(<1..365)
                     /locus_tag="QGG16_00455"
                     /inference="COORDINATES: protein motif:HMM:NF014671.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HJP23778.1"
                     /translation="MSRGRTARVLTRRVDADGNRRVPDELIVEEPMSIRLDGELVATT
                     MRTPGDDFELAVGFCITEGVLADTPVRSVRYCGQGLASEAEYNDVTVDTGGRAPVPTP
                     RLGPASSSCGICGTVAIDEL"
     gene            complement(505..>1756)
                     /gene="groL"
                     /locus_tag="QGG16_00460"
     CDS             complement(505..>1756)
                     /gene="groL"
                     /locus_tag="QGG16_00460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223986.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HJP23779.1"
                     /translation="VAAAVDSIRNSAQDVSSDKGQIANVAAISAADPEIGAMISEAID
                     KVGKDGVITVEEGQTFGMEMDLVEGMRFDKGYISPYFVTDPDRMEAVLEDPYILFVGS
                     KITAVRDLVPALEKVMQTNRPLLILAEDVEGEALATIVVNKIRGTFNAAAVKAPGFGD
                     RRKAMLQDMAILTGGQVISEEVGLKVDAVTLDMLGQARKVVVSKDETTIVEGAGDDAD
                     ISGRIAQIKGEIENTDSDYDREKLQERLAKLSGGVAVLKVGAATEVELKEKKHRIEDA
                     VSTTKAAIEEGVVAGGGVTLLRAQAAALEAGESLAADEATGTRIVAKALEGPLTQIAV
                     NAGLEGGVIVEKVRNLEGSVGFNAATGEYEDLVVAGIIDAAKVTRSALQNAGSIAALF
                     LTTEAVVADAPAEGAGGGMPDMDF"
BASE COUNT          304 a          585 c          559 g          308 t
ORIGIN      
        1 agttcgtcga tggccaccgt tccgcaaata ccgcaggacg acgaggcggg gccgagccga
       61 ggcgtgggga cgggcgcccg accaccggtg tccacggtga cgtcgttgta ctcggcctcc
      121 gacgccaacc cctgtccgca gtagcggacc gagcggaccg gagtgtcagc cagaacaccc
      181 tcggtgatgc agaacccgac ggccagctca aagtcatcac ccggggttcg catggtggtg
      241 gccaccagct caccgtcgag gcggatcgac atgggttcct cgacgatcag ctcgtcgggg
      301 acgcgacggt tgccatcagc gtcgacacgg cgggtcagca cccgagcggt ccggccccgg
      361 ctcatgtccg ggcccagacg aatgtgttca ccagcctcat gcccaccagt gaacaggctc
      421 ggctcccaaa acgcggaacg ggcgccccgc aaggcgcccg tctcacgtat tcggaacggg
      481 aagtaccgtt ccggaaatcc cgttctagaa atccatatcc ggcatgccgc cgcctgcacc
      541 ctcggccggg gcatcggcga cgacggcctc agtggtgagg aacaacgccg ctatggagcc
      601 tgcgttctgg agggccgaac gggtcacctt ggcggcatcg atgatgccgg cgacaaccag
      661 gtcctcgtac tcgccggtgg cggcgttgaa gccaaccgag ccttcgaggt tgcggacctt
      721 ctcgacaatg acgccaccct cgaggccagc gttcacagcg atctgggtca acggaccctc
      781 gagtgccttg gccacgatgc gggtaccggt ggcctcatcg gcggccagtg actcaccggc
      841 ctccagagcg gccgcctggg cacgaagcag cgtcacgcca ccgccggcca cgacgccctc
      901 ctcaatggct gccttggtgg tgctcaccgc gtcctcgatg cggtgcttct tttccttgag
      961 ttcgacctcg gtggctgcgc caaccttcag gacggccacg ccgccggaca acttggctag
     1021 acgctcctgg agcttctcac ggtcgtagtc cgagtcggtg ttctcgatct cgcccttgat
     1081 ctgggcgatg cgccccgaga tgtcagcgtc gtcgccggca ccctcgacaa tggtggtctc
     1141 gtccttgctg acgacgacct tgcgggcctg accgagcatg tcgagtgtca cggcgtcgac
     1201 cttgagccca acctcctcgg agatgacctg accaccggtg aggatggcca tgtcctggag
     1261 cattgccttg cgacggtcac cgaagcccgg ggccttgacg gccgcggcgt tgaaggtgcc
     1321 acggatcttg ttgaccacga tggtggccag ggcctctccc tcgacgtctt cagcgaggat
     1381 aagcagcgga cggttggtct gcatgacctt ctcgagggcc ggcactagat cacgcacagc
     1441 ggtgatcttg gaaccgacga acaggatgta cgggtcctcg aggacggctt ccatacggtc
     1501 ggggtcggtc acgaagtacg gcgagatgta acccttgtcg aagcgcatgc cctcgacgag
     1561 gtccatctcc ataccgaagg tctgaccctc ctcgacggtg atcacgccgt ccttgcccac
     1621 cttgtcgatg gcctcggaga tcatggcgcc aatctcggga tcagcggccg agatggcggc
     1681 cacgttggcg atctgtccct tgtcgctgga gacgtcctga gccgagttgc ggatggaatc
     1741 cacagcggcg gccacg
//
LOCUS       DASCMR010000024         3657 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000146801, whole genome shotgun sequence.
ACCESSION   DASCMR010000024 DASCMR010000000
VERSION     DASCMR010000024.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3657)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3657)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3657
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000146801"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            363..1100
                     /gene="infC"
                     /locus_tag="QGG16_00465"
     CDS             363..1100
                     /gene="infC"
                     /locus_tag="QGG16_00465"
                     /inference="COORDINATES: protein motif:HMM:TIGR00168.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HJP23780.1"
                     /translation="MATPTNQEPRINDRIRARQVRLVSPDGEQMGIQTLSDALDAAQE
                     IGLDLVEVADKADPPVCRIMDYGKFKYEQSQRAKESRKKATHVLVKEMKYRPKIGPGD
                     FETKTRKVEAFLSEGCKVKVTIMFRGREMQHPELGRRILDRVAEVVSHVGRVELYPKQ
                     DGRNMIMVLVPGQATRKQREAAADRQVVDTESDSGEAAEAADLEATDTAETVAPATDT
                     TAPEATQPETPSEAAVAEDQPTEPPSA"
     gene            1142..1336
                     /gene="rpmI"
                     /locus_tag="QGG16_00470"
     CDS             1142..1336
                     /gene="rpmI"
                     /locus_tag="QGG16_00470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005950095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HJP23781.1"
                     /translation="MPKMKTHRGAAKRFKVTGSGRLKRRNANLSHILEKKSPKRKRRL
                     ARQSDVDPANVPAVRKQLGI"
     gene            1457..1813
                     /gene="rplT"
                     /locus_tag="QGG16_00475"
     CDS             1457..1813
                     /gene="rplT"
                     /locus_tag="QGG16_00475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013946005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HJP23782.1"
                     /translation="MARVKRAVHSKKKHKAVLEQAKGYYGDKSRTFRAANEQVMHSGN
                     YAFRDRRARKGQFRRLWIQRINAACRQHGTNYSVFIAGLKQAGIEVDRKVLADLAVND
                     SAAFAALVEMAGAEAA"
     gene            1855..2688
                     /locus_tag="QGG16_00480"
     CDS             1855..2688
                     /locus_tag="QGG16_00480"
                     /inference="COORDINATES: protein motif:HMM:NF012797.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0001510 - RNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HJP23783.1"
                     /translation="MHGYSGSNLRVRRLRRLARDRGERHERRSFVVEGPGLVAEVLDA
                     GRDVNMVLVPESSLGDLDVGPRLEALLARAEATGADVGTVPDSVFDGLTSTTSPQPAL
                     AEVGFVDVDPDVLFAGVETGHPLLVLVGLADPGNVGTLLRSAEAFGAAGVLLVGGVDP
                     YNPKVVRAAAGSAFRIPFAMVGEDEAVEVGGRLAEADIVAWATVPTGGAPMVDVAKAE
                     GLLALVLGNEPHGLTDDVLTACAGSVTVETTGNVDSLNVAVAGSVALYEACRTRGASD
                     A"
     gene            2816..>3657
                     /locus_tag="QGG16_00485"
     CDS             2816..>3657
                     /locus_tag="QGG16_00485"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HJP23784.1"
                     /translation="MTPELDQHLADAAAAVAAAGDLDALRLLDGDLLGKSSVVTEARR
                     GLGALDPDERKDAGRRLNEVRTELERLLADRRATLEASARAVTLEAERLDLTELDGGR
                     RLGHRHVVTQTWERLEDLFVGMGYTVAEGPEIEDEWHNFGALNFPPGHPARDMYDTLY
                     VDHGEPGSTLLRTHTSPVQIRVMESCEPPIYSIMPGRVFRSDTADATHMPVFHQIEGL
                     VVDRGITFGDLAGTLEAFTKAYFGGEFTSRLRPSYFPFTEPSAEFDIQRPDGTWLELA
                     GCGIR"
BASE COUNT          655 a         1208 c         1219 g          575 t
ORIGIN      
        1 gtggtggcct gcccggcggg cggcactctc gtcgggtgct ggtcgacccc gggagcggta
       61 gcctacggct cacaactaga tggaaagcgg ggttcacccc ccacccggca cgcgttcagc
      121 gggcccgggt cctcatctcg tctgatcgac gggtcgtcca gcgtcttgaa gggcaatgtc
      181 ctgaaaggca gtgccttcag tggctagacg gccgtcgacc ttggcgggtg tcggctttcc
      241 ggcgcccgtc gtttcggctt ttccggggtc tttaccctgt gtaccagtcg gttccttcgg
      301 acgccaccgc ccaaaccccc acgaggagcg agagccaacg tgacgcacag gagtgacgac
      361 taatagcaac gccgacgaat caggaaccgc ggatcaatga ccgcatccgg gcccgacagg
      421 tccggctggt ctcgcccgac ggtgaacaga tggggattca gaccctgtct gacgcactgg
      481 acgcggccca ggagatcggg ttggacctgg tggaggtggc cgacaaggcc gacccaccgg
      541 tgtgccggat catggactac gggaagttca agtacgaaca gtcccagcgg gccaaggaat
      601 cgcgcaagaa ggccacccat gtcctggtca aggagatgaa gtaccgaccc aagatcggtc
      661 ctggtgactt tgagaccaag acccgcaagg ttgaggcttt tctgagcgag ggttgcaagg
      721 tcaaggtcac catcatgttc cgtggccggg agatgcagca cccggagctc ggtcgccgca
      781 tcctcgatcg ggtggccgag gtcgtgtccc atgtgggacg agtcgagctg tacccgaaac
      841 aggatggccg aaacatgatc atggttctgg tgcccggtca ggccacgcgc aaacagcgcg
      901 aggctgccgc cgatcgccag gtcgtcgaca ctgagtccga ttccggcgaa gccgcggagg
      961 ctgctgatct ggaggcgacc gacaccgccg agaccgtcgc tcccgcgacc gacacgaccg
     1021 caccggaggc cactcagccc gagacgcctt ccgaggcggc cgtcgccgag gaccagccca
     1081 ccgaaccgcc gtccgcctga ccggccgacg aactactaga cccgaaaacg gagcagaaac
     1141 catgcccaag atgaagaccc accgcggcgc tgcgaagcgc ttcaaggtga ccggcagcgg
     1201 gcgcctcaag cgtcgcaacg ccaacctcag ccacattctc gagaagaagt ccccgaagcg
     1261 aaagcgtcgg ctggctcgcc agagcgacgt ggacccggcg aatgtgccgg ctgtccgcaa
     1321 gcaactcggc atctgaccga gccccacggg gccttggagc cccatcgaga caacaccggt
     1381 accgactgaa cgggtaccga ccgaacagcg atcgtccctg ccgccgccgg tggggacccg
     1441 aacacaggag agcgtgatgg ccagggtcaa gcgagccgtc cacagcaaga agaagcacaa
     1501 ggcagtcctc gagcaggcga agggctacta cggcgacaag agccgtactt tccgcgctgc
     1561 caacgagcag gtgatgcatt ccgggaacta cgccttccgc gaccgtcggg cgcgtaaggg
     1621 acagttccgt cggctctgga tccagcggat caacgccgcc tgccgtcagc acgggaccaa
     1681 ctacagcgtc ttcatcgccg gtctcaagca ggctggaatc gaagtcgacc gaaaggtgct
     1741 ggccgacctg gccgtcaatg acagtgcggc gttcgccgcc ctggtagaga tggccggcgc
     1801 cgaagcggcc tgaacgccgc tcaacggttg ccgacgacgg ctaccgatca gatgatgcac
     1861 ggttattcag ggagcaacct gcgggttcgt cggttgcgaa ggctggcccg tgatcgcgga
     1921 gagcggcatg agcgacgttc cttcgtcgtc gagggtccgg gcctggtggc cgaggtgctc
     1981 gatgccggcc gcgacgtgaa catggtgctg gttcccgagt cgtcgttggg cgacctcgac
     2041 gtcgggccac gtctcgaagc gctcctggcg cgtgctgagg caaccggggc tgatgtcggc
     2101 acggtgcccg actcggtttt cgacgggctg accagtacca cgtcccccca gcccgcccta
     2161 gccgaggtgg ggttcgtcga cgtcgacccg gatgtgctgt tcgccggcgt cgagaccggg
     2221 catccgttgc tggtgctcgt gggcctggct gatccgggca acgtgggcac cctgttgcgg
     2281 tcagctgagg ccttcggagc tgcgggcgtc cttctcgtcg gcggcgtgga cccctacaac
     2341 ccgaaggtcg tacgggcggc cgccggttct gccttccgga tcccgttcgc catggtgggc
     2401 gaagacgagg ccgtggaggt cggggggcga ctcgccgaag ccgacattgt cgcctgggcg
     2461 accgtgccca ccggtggggc gccgatggtc gacgtggcca aggcggaggg gttgttggcc
     2521 ctcgttctcg gcaatgagcc ccacgggctc accgacgatg tactgacggc ctgcgctggt
     2581 tcggtcaccg tggagacaac gggaaatgtg gactcgctca acgtggccgt agccggatcg
     2641 gtggcgctct acgaggcgtg ccggacccgg ggagcctcag acgcctgatc ggtccgaaac
     2701 gatcatcggg gaccagaggg ccgtgcccta gcctgcggag gacgtgcccc gtccagggcg
     2761 cccgtcgtgc accgtcttca accgaccgcc ccgaaagcct ccacgcgctc cacccatgac
     2821 cccagaacta gaccaacacc tcgccgatgc cgccgccgcg gtggcggccg ctggcgacct
     2881 agatgcgctc cggctgctcg acggtgatct cctggggaag tcgtcggtgg tcaccgaggc
     2941 ccgccggggc ctgggggcac tggatcctga cgagcgaaag gacgctggtc gccgcctcaa
     3001 cgaggtccgg accgaactgg aacgcctgct cgctgatcgc cgggcgacgc tggaggccag
     3061 tgcacgggcc gtcaccctcg aggccgagcg tctcgacctg accgaactcg acggtggccg
     3121 tcgcctgggc caccgccacg tagtcactca gacctgggag cgtctcgagg acctgttcgt
     3181 ggggatgggg tacacggtgg ccgaaggtcc cgagatcgag gacgagtggc acaacttcgg
     3241 cgctctcaac ttcccgcccg gacatcccgc gcgcgacatg tacgacacgc tctacgtcga
     3301 tcacggtgag cccggaagca ctctgctgcg tacccacacc tcccctgtgc agatacgcgt
     3361 catggagtcc tgcgagccgc cgatctactc gatcatgccg ggacgcgtgt tccgcagcga
     3421 cacggccgat gccacacaca tgccggtgtt ccaccagatc gagggtctgg tggtcgatcg
     3481 gggcatcacc ttcggcgacc tggcgggcac cctcgaggca ttcaccaagg cctacttcgg
     3541 cggcgagttc acgtcgcgcc tacgaccctc ctacttcccg ttcaccgagc cttcagctga
     3601 gttcgacatc cagcgtcccg acggcacgtg gctggaactg gctggttgcg gcatacg
//
LOCUS       DASCMR010000025         5496 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000148068, whole genome shotgun sequence.
ACCESSION   DASCMR010000025 DASCMR010000000
VERSION     DASCMR010000025.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5496)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5496)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5496
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000148068"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..297)
                     /locus_tag="QGG16_00490"
     CDS             complement(<1..297)
                     /locus_tag="QGG16_00490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23785.1"
                     /translation="MDNVRCLMTDDPAPDAEALASRPGVLAVDLVDQGRLHLLGARSM
                     PVTEPIWTALIWITGEAHFLAPEHLLGVLEVDRHHVWGASLGERGDAALSPDALL"
     gene            343..1116
                     /locus_tag="QGG16_00495"
     CDS             343..1116
                     /locus_tag="QGG16_00495"
                     /inference="COORDINATES: protein motif:HMM:NF012596.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HJP23786.1"
                     /translation="MLHIDDADRVRLLRIDRPEALNALDEVHYDALADALDDARTSAE
                     VAVVVLTGTGRAFCAGTDLGDMERRKDPDSGFVPGRHGFAGFMDRLSTFPKPVVVAVN
                     GLGIGIGATVIGHADLVFMSSEARLQCPFTALGVVPEAASSYLFPRLLNRQDATWVLM
                     SSEWIDAQECLRMGLAWRLCAPEALMDEAMSYARRLAAKPVASLVASKQLLTAPLAEA
                     IAEARIREDQQFAELMGGPANAEALRAFAEKRPPDFTGM"
     gene            complement(1125..1271)
                     /locus_tag="QGG16_00500"
     CDS             complement(1125..1271)
                     /locus_tag="QGG16_00500"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23787.1"
                     /translation="MIAETDMVVEILNRREFSSLPDQSPTVAHKVLAGAFKRLHEVAN
                     GPVS"
     gene            complement(1313..2257)
                     /locus_tag="QGG16_00505"
     CDS             complement(1313..2257)
                     /locus_tag="QGG16_00505"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HJP23788.1"
                     /translation="MPMSDEFQALSTRVRNWGRWGDDDQIGTLNLITAEVVAAAADGV
                     RHGRTIPLAVPLEHEGIQAGFVPGRDNPTRTMHAVNEALDPEAGPDAFHTSDDHVTMG
                     LQAGTHWDGLGHVSYSGLMYNGFDAATITGTGASRCGIHHLRSVVSRGVLLDVARSKG
                     VDVLDCPYAITADDLDEAAALGGVEVRSGDIVLVRTGRMAIYHESGGMAYCLGPSQDG
                     SNAGMGLSSVAWMHDHDVAAVANDTLAFEVYPSEADSLAVHLLQLVDMGLTQGQNWDL
                     ETLSADCAADGVYEFLLSATPEPFVDAVGSPVAPVAVK"
     gene            complement(2292..3254)
                     /locus_tag="QGG16_00510"
     CDS             complement(2292..3254)
                     /locus_tag="QGG16_00510"
                     /inference="COORDINATES: protein motif:HMM:NF014841.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HJP23789.1"
                     /translation="MDSPGRTPVLVHLWGEHFPSDAIRARFPTVDFIPIPTDGAVPDG
                     VSGGACITQAARTGNLKEVLERGVTWVHALGQGVDHFPFDQLGDRTLTCARGVNAVPI
                     AEWVVAMLLTAVKQLPDRWVSEPPRHWVLADLGTLDGATVAFIGFGSINRAVARRLTP
                     FGCQMMAVTRSGDPGPVPGVPDGMVFSTDVRAAVADADHVVVGAPLTPATEGMVDADL
                     LAAMKPGAHLVNIARGRIVDQDALRRSLDAGHLGLASLDVCDPEPLPAGHWLYDHPQV
                     RLSPHVSWADPGAIERLHAAFADNLERWLAGQPLVDVVDVEAGY"
     gene            complement(3505..4014)
                     /locus_tag="QGG16_00515"
     CDS             complement(3505..4014)
                     /locus_tag="QGG16_00515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23790.1"
                     /translation="MSYRYVNRVPRPWALLYPAVLLPWLISLVVVGVTAEVLLWSVPS
                     LLVLHVAIRAFMTLTICVADGEVVAVFHWGWPRRRIALADVTSQRVTTHGARYGWGIR
                     FVPGGTLWRVWGRDSVELTLADKRRTFSIGTADPEGLLAAIATAPRSSSSTNRSTRSR
                     IGRKGRVVL"
     gene            complement(4029..4841)
                     /locus_tag="QGG16_00520"
     CDS             complement(4029..4841)
                     /locus_tag="QGG16_00520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HJP23791.1"
                     /translation="MAWDITDFATLLALESHGPDVFVGISPEYPWGRVYGGQVVAQGL
                     RAAQATVDSDHHVHSLHAYFIRGGTSDEPIRYEVDRIRNGRSFVTRRVVARQSDGAIL
                     NLACSFQVHEEQADIQESKLPDDVGEPGSGTVEDWELLGRRVAHQSVGRSAIWLKVFG
                     DLGDDPRLQACALAYTSDDIPTNAVGSTHPRIDQVRDDSVTTYGEIFIGASLDHSIWF
                     HRPPPPDQWLLHDLRSHGLASARGLAVGEVFAPSGVHVATVAQEVLIRERTR"
     gene            complement(4843..>5496)
                     /locus_tag="QGG16_00525"
     CDS             complement(4843..>5496)
                     /locus_tag="QGG16_00525"
                     /inference="COORDINATES: protein motif:HMM:NF013696.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HJP23792.1"
                     /translation="GDTSITVTITGRGGHASAPHHATDPIPATAAIITALQTAVTREI
                     DVFDPAVLTIAHLVAGTTTNVIPETAFFEGTIRCVSEHTRSRIREAVARTVHGVAEAH
                     GCTASLEMVDGYPVTMNDPSEAARFAEVCTTTLGNESHRVMPAPFMGGEDFSYVLQKV
                     PGVMAFLGVCPDDEPDPRKAPPLHSNRMRLNEDGLVHGIALHVGMALHGGSALDKNA"
BASE COUNT          940 a         1770 c         1890 g          896 t
ORIGIN      
        1 cagaagggcg tccggcgaga gcgcggcgtc gccgcgctct ccgagactgg caccccacac
       61 gtgatggcga tccacctcga gcacgcccag gagatgctcg ggggccagga agtgagcctc
      121 gccggtgatc cagatcagcg ccgtccagat cggctcggtc accggcatgg accgagctcc
      181 cagtaggtgg agccgaccct gatcaaccag gtccaccgcg aggacgccgg gtcgggacgc
      241 cagcgcctca gcatcgggcg ccggatcatc cgtcatcagg caacgcacat tgtccatcgg
      301 cccagcatcc ccttgtgggt caacggctgc cacactcagg tcatgctcca tatcgacgat
      361 gccgaccgag tccgtctcct ccggattgac cgacccgaag ccctcaacgc tctcgacgag
      421 gtccactacg acgcactggc cgacgccctc gatgatgccc ggacgtcggc cgaggtggcg
      481 gtggtggtcc tcaccggcac cggccgagcc ttttgcgccg ggaccgacct cggtgatatg
      541 gagcgccgca aggacccgga ctcgggattc gtgccgggtc gacatggctt cgccggattc
      601 atggatcgac tgtccacctt ccctaagcca gtcgtggtgg ccgtcaacgg gttgggcatc
      661 gggatcggtg ccacagtgat cggccacgcc gacctcgtct tcatgtccag cgaggcccga
      721 ttgcagtgtc cgttcaccgc tctgggggtg gtgcccgaag ccgcgtccag ctacctgttt
      781 ccccggctcc tgaatcgtca ggacgccacg tgggtgctca tgagctcgga gtggatcgac
      841 gcgcaggaat gcctacggat ggggctggcg tggcggctgt gtgcccccga ggctctcatg
      901 gacgaggcga tgagctacgc ccggcgtctg gcggccaagc cggtggcgtc actggtcgcg
      961 tccaagcaac tattgaccgc accgctggcc gaggccattg ccgaagcccg catacgcgag
     1021 gaccagcagt ttgctgaact gatgggtggc ccggccaatg ccgaggcgct ccgggcgttt
     1081 gccgaaaagc ggccgccgga cttcaccggg atgtagagac cggcctagga gacgggtccg
     1141 ttggccactt catggaggcg cttgaacgcg ccggccaaga ccttgtgggc cacggttggg
     1201 ctctggtcag gcaggctgga gaactcgcgg cggttcagga tctcaacgac catgtcggtc
     1261 tcggcgatca cctttgtcgt cggactcgtc gaacagcgat tccaggtgag acctacttga
     1321 cggcgaccgg tgcgactggg ctccccacgg cgtccacgaa gggctccgga gtggcgctga
     1381 ggaggaactc gtacacaccg tcggcggcac aatcggccga gagggtctca aggtcccagt
     1441 tctgaccctg ggtcaacccc atatcgacca gttgaagcag gtgcacggcc aacgagtcgg
     1501 cctctgacgg gtacacctcg aaggccaggg tgtcattggc aaccgcagcg acgtcgtgat
     1561 catgcatcca cgccacgctg gacagcccca tccccgcatt ggagccgtcc tggctggggc
     1621 cgaggcagta ggccatccca ccggactcgt ggtagatggc catccttcct gtccggacta
     1681 ggacgatgtc gcccgaccgc acctccacgc cacctagcgc tgccgcttcg tccaggtcgt
     1741 cggcggtaat ggcgtacgga caatccagga cgtcgacgcc cttggaccgg gccacgtcca
     1801 gcaacacacc acgggagacg acactccgga ggtggtggat cccgcaacgc gaggctccag
     1861 tcccggtgat ggttgccgca tcaaagccgt tgtacatcag gcccgagtag gacacgtggc
     1921 cgagaccgtc ccagtgggtt ccggcctgca ggcccatcgt gacgtggtcg tcgctggtgt
     1981 ggaacgcgtc ggggccggcc tctggatcca gggcctcgtt cacggcatgc atggtgcggg
     2041 ttgggttgtc gcgacccggg acgaacccgg cctgaatgcc ctcgtgttcg agggggacag
     2101 ccaagggaat ggtgcgtccg tgtcggacac cgtccgccgc cgcagccacc acctcggctg
     2161 ttatcaggtt cagggtgccg atctggtcgt cgtcacccca gcgcccccaa ttgcggacac
     2221 gggtggatag cgcctgaaac tcgtcggaca ttggcatatg gggctcctgc tttcctcagt
     2281 atctggtgtt ttcagtagcc ggcttcgacg tcgaccacgt cgacgagagg ttgtccggcc
     2341 aaccagcgtt cgagattgtc ggcgaaggcg gcgtggagcc gctcaatggc tccagggtcc
     2401 gcccacgaca cgtgagggct gagccgcacc tgagggtggt cgtagagcca gtggcccgcg
     2461 ggtagtggct cggggtcaca gacgtcgagc gaggccagcc cgaggtggcc ggcgtccagc
     2521 gaccgtctaa gcgcatcctg gtcgacgatg cggccccggg cgatgttgac caggtgagcc
     2581 cccggtttca tggcggccag caggtcggca tcgaccattc cctcggtggc cggcgtgagc
     2641 ggagcgccca ccaccacgtg gtcggcgtcg gccaccgcgg cccgcacgtc ggtcgagaac
     2701 accattccgt caggcacgcc tggcacgggg ccggggtcac cggatcgggt cacggccatc
     2761 atctggcatc cgaagggagt gagtcgccgg gcgacggccc ggtttatgga tccaaagccg
     2821 atgaaggcca ccgttgcgcc gtccagtgtg cctaggtcgg ccagcaccca gtggcggggc
     2881 ggctcggaga cccatcggtc ggggagctgc ttgaccgccg tcaacagcat ggccaccacc
     2941 cattcggcga tggggacggc gttgacccct cgggcacagg tcagcgtgcg atcgcccaac
     3001 tggtcgaagg ggaagtggtc gacaccctgg ccaagcgcat ggacccaggt gactcctcgt
     3061 tccagtacct ctttaaggtt gccggtgcgg gccgcctggg tgatgcaggc cccgcccgac
     3121 accccgtcgg gcaccgcacc gtcggtgggg atcgggatga agtccacggt tgggaaccgc
     3181 gcccggatcg cgtcggaggg aaagtgctcg ccccacaggt ggacgaggac cggggtccgg
     3241 ccaggggagt ccatggccgg gagtctggca cggtgtcgcg agcgccttcc gaccggccag
     3301 actctcgcca tggctgcagg gccagcgtag gaaaggcgac gccagtaggt actggagatg
     3361 gcgacccgcc tggccgaaga ggcagaggtg gcgttggccc cgctctacaa ctagttcacc
     3421 ggcaagaacc tcctaatcct cgccgtgaag gacggtcgac catctcgagg gacgctgtgc
     3481 tacgacgcct tcactgtcga actgctacag aactaccctg cccttccttc caatccgcga
     3541 tctcgtcgac ctgttcgtcg atgagctcga ccggggggcg gtggcgatgg cagccaggag
     3601 cccctcgggg tcggccgtgc cgatcgagaa cgtgcgccgc ttgtcggcca gggtgagttc
     3661 gacggagtcc cggccccaga cccgccacag cgtgccgccg gggacgaagc ggatgcccca
     3721 gccgtagcgg gcgccgtgag tggtgacccg ctgggaggtg acgtcagcga gcgcgattcg
     3781 tctgcggggc cagccccagt ggaataccgc cacgacctcg ccgtcggcga cgcaaatggt
     3841 gagcgtcatg aaggcccgga tcgccacgtg tagaacgagc agcgaaggga cgctccagag
     3901 gagcacctct gcagtcacac cgaccaccac cagggaaatt agccaaggca gcagcactgc
     3961 cgggtagagc aaggcccacg gccggggcac tcggttgacg taccggtaac tcatagcgca
     4021 gatccagctc agcgggttcg ctcgcggatc aggacctcct gggccacggt ggccacgtgc
     4081 acacctgacg gggcgaacac ctcacccacg gccaaccccc gggcgctggc caggccatgg
     4141 gaccgtaggt cgtggaggag ccactggtcg ggcggcggtg gccggtgaaa ccagatggag
     4201 tggtcgaggc ttgccccgat gaagatttcg ccgtaggtgg tcaccgagtc gtcacggacc
     4261 tggtcgattc gggggtgggt gctccccacc gcattggtgg ggatgtcgtc ggacgtgtac
     4321 gccaacgcac acgcctgaag ccgggggtcg tcgcccaagt cgccgaacac ttttagccag
     4381 atggcggatc ggccgacgga ctggtgggcc acacggcgac cgaggagctc ccagtcctct
     4441 acggtgcccg aaccgggttc gccgacgtcg tcgggaagtt tcgactcctg aatgtcggcc
     4501 tgctcctcgt ggacctggaa tgaacacgcc aggttcagga tcgctccgtc ggactggcgg
     4561 gccaccaccc gtcgggtcac gaacgatcgg ccgttgcgga tccggtccac ctcgtaacga
     4621 atcggctcgt cgctcgtgcc gcccctaatg aagtaggcgt gcagcgagtg cacgtgatgg
     4681 tcggagtcga ccgtggcctg ggcggcccgc agtccctgag ccaccacctg accgccgtag
     4741 acgcggcccc atgggtattc ggggctgatc ccgacgaaca catcgggacc gtgggattcc
     4801 agcgccagca gggtggcgaa gtcggtgatg tcccaagcca tgttaggcgt tcttgtcgag
     4861 agcggagcca ccgtggagag ccatgccgac gtggagggca atgccgtgaa ccagcccgtc
     4921 ctcgttgagg cgcatgcggt tggagtgcag cggcggagcc ttgcgggggt cgggttcgtc
     4981 gtccgggcag acgccgagga atgccatcac accgggaacc ttctggagca cgtaggagaa
     5041 gtcctcgccg cccatgaacg gtgccggcat gacccgatgg ctctcgttgc cgagggtcgt
     5101 cgtgcagacc tcagcaaacc gggcggcttc ggaggggtcg ttcatggtga ccgggtagcc
     5161 gtcgaccatc tcgagggacg ccgtacagcc gtgggcctcg gctaccccgt gcacagtccg
     5221 ggccaccgct tcgcggatgc gcgagcgggt atgttccgat acgcatcgga tggttccttc
     5281 gaagaacgcg gtctcaggaa tcacgttggt cgtggtcccg gccaccagat gcgcaatggt
     5341 cagcactgcc ggatcgaaca cgtcgatctc gcgggtcaca gcggtctgca gagcggtaat
     5401 gatcgcagca gtggccggga tggggtcggt ggcgtgatgg ggagccgatg catggccgcc
     5461 tcggccggtg atggtgacgg tgatcgaggt gtcgcc
//
LOCUS       DASCMR010000026         2449 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000152316, whole genome shotgun sequence.
ACCESSION   DASCMR010000026 DASCMR010000000
VERSION     DASCMR010000026.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2449)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2449)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2449
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000152316"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..420
                     /locus_tag="QGG16_00530"
     CDS             <1..420
                     /locus_tag="QGG16_00530"
                     /inference="COORDINATES: protein motif:HMM:NF014874.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyanophycin synthetase"
                     /protein_id="HJP23793.1"
                     /translation="LDGQVKARASAPGRLLVVFGCGGDRDVGKRPLMGQMAEEAADVV
                     VVTSDNPRGEPPEGVIADILAGMERPDPLVEPDRRRAIAVALAAASAADLIVVAGRGH
                     ETIQEMAGLQLPFDDRAVVVEEWSRIMDSGSGPGAER"
     gene            417..1463
                     /gene="mraY"
                     /locus_tag="QGG16_00535"
     CDS             417..1463
                     /gene="mraY"
                     /locus_tag="QGG16_00535"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HJP23794.1"
                     /translation="MIRILLAAGIAMVVSLIGTRVLILWLTRLRLGQPIRDDGPEGHV
                     TKAGTPTMGGLAIIGGAFLGYVLSDLYRGIYTRTGIFVMLAIISGGVVGLMDDWIKVV
                     RERNLGLNKRAKMLGLFAVALTFAVLMLEHAPTHTTLSVTRFDQPGIELGSILWSIWA
                     VLLIIGSANAVNLTDGLDGLAAGAGTFCFGAYTVIAFWQFRYPETYEIAHALDLAVVA
                     AAMAGGCLGFLWWNAAPARIFMGDTGSLAIGTGLATLALATGTHLLLPIVAGLFVAET
                     VSVIVQIASFRLFGGRRVFRMAPFHHHFELSGWPETTVIIRFWIMSGLCTAAGLGIFY
                     ADSLSAGVADGLGG"
     gene            1460..>2449
                     /gene="murD"
                     /locus_tag="QGG16_00540"
     CDS             1460..>2449
                     /gene="murD"
                     /locus_tag="QGG16_00540"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: protein motif:HMM:NF019850.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008764 -
                     UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HJP23795.1"
                     /translation="MSDATTLVLGLGVAGRAVLDALVRREFYVVAVDDAPGGAARQCA
                     DRLGVPLVEAPAADEWPRLLDGISEVVMGPGVPDSHPCHAAARAARVPVIDESDLAAR
                     WDDRPRCAVTGTNGKTTVVTLVAEMLERSGIRTLTAGNTDTPLVAAIDDGEVSTFVVE
                     ASSFRLSHANMFKASPAGWLNFAPDHLDVHADASAYEAAKARIFEGVARPADAVANAS
                     DPVVMAHAPEGALLFGGVETPCRVDGEGSSALLIVNDEPLIEVAALMRSLPHDLDNAQ
                     AAAALAIRAGASRTACAETLLGFAGLAHRMALVAEIEGVRFVDDSKATTPHATL"
BASE COUNT          363 a          735 c          847 g          504 t
ORIGIN      
        1 ctggacggtc aggtcaaagc gcgtgcgtca gcacctgggc ggttgctggt ggtgttcgga
       61 tgcggtggtg atcgtgatgt cgggaagcgg ccgctcatgg gtcagatggc cgaagaagcc
      121 gccgatgtcg tggtcgtcac gtcggacaat ccgaggggtg aaccacctga gggggtaata
      181 gcggacatcc ttgcgggaat ggaacgaccc gatccgctcg tggagcccga ccgtcgtcgt
      241 gccatcgccg tcgctctggc tgcagcgtcg gccgccgatc tgatcgtggt ggcgggccgg
      301 ggtcacgaaa ccatccagga gatggcgggt cttcaactcc cattcgacga ccgcgcggtg
      361 gtcgtcgagg agtggtcacg gataatggac agtgggtccg gtccgggggc agagcggtga
      421 tccggatcct gttggcagcc ggcattgcca tggtggtatc tctcatcggt acccgcgtgc
      481 tgatcctttg gttaacccgt ctgcggctcg gccagcccat ccgagacgac ggcccggagg
      541 gtcacgtcac caaggccggt acgccgacca tgggaggact ggccatcatc ggcggggcgt
      601 ttctgggcta tgtcctgagc gacctttacc gaggcatcta tacccgcact ggaatcttcg
      661 tgatgctggc catcatcagt gggggagtgg tcgggctgat ggacgactgg atcaaggtag
      721 tgcgtgagcg caacctcggt ctcaacaagc gggccaagat gctcgggctc tttgcagtgg
      781 ctcttacctt cgctgtactg atgctggaac acgcaccgac ccacaccacg ctgtctgtca
      841 cccgtttcga ccagccgggt attgaactgg gttcgattct ctggtcgatc tgggccgtgc
      901 tcctcatcat cggttcggcc aatgccgtca atctgaccga cggcctagac ggcctggcgg
      961 ccggggcggg caccttctgt ttcggtgcct acaccgtcat cgccttctgg cagtttcggt
     1021 atcccgagac ctacgagatc gcccatgccc tggacttggc ggtggtagca gcggccatgg
     1081 ccggcggttg cttgggcttc ctgtggtgga acgccgctcc ggcccggatc ttcatgggcg
     1141 atacggggtc cctggccatt ggtacgggcc tggccaccct cgctctggcc accgggacgc
     1201 acctactgtt gcccatcgtg gccgggttgt tcgtggccga aacggtgtcg gtgatcgtgc
     1261 agatcgcgag cttccgcctg ttcggtggtc gccgggtttt ccggatggcg ccctttcacc
     1321 atcacttcga gctgagcgga tggcccgaga ccacggtgat catccggttc tggatcatgt
     1381 cgggactctg cacggctgca ggtctgggga ttttctatgc cgattcattg tcggccgggg
     1441 tggccgacgg gctcggcgga tgagcgacgc aaccactctg gtcctcggac tgggagtagc
     1501 cggtcgggct gtgctggatg ccctggtccg ccgggagttc tatgtggtgg ccgtagatga
     1561 tgcgcctggt ggtgcggccc gccagtgcgc ggatcgcctt ggtgtgccac tggtggaggc
     1621 gccggcggcc gacgagtggc cacgattgct ggatggaatc agtgaggtag tcatgggtcc
     1681 cggggttccc gattcccacc cctgccatgc cgcggcccgg gcggccaggg tcccggtgat
     1741 cgatgagtct gatctggcag cccgctggga cgaccgtccc cgttgcgctg ttaccggtac
     1801 caacgggaag accacggtgg tgactctggt ggcggagatg ttggaacgtt ccggcattcg
     1861 gaccttgacg gccgggaaca ccgatacgcc gcttgtggcg gccatcgatg acggagaggt
     1921 gtcgaccttc gtggtcgaag cctcttcgtt ccgtcttagt cacgccaata tgttcaaggc
     1981 gtcgcccgcc gggtggctga acttcgcgcc ggaccatctt gacgtacacg cggacgcttc
     2041 cgcctatgag gcagctaagg cccggatctt cgaaggggta gcccggccag cggatgcggt
     2101 ggccaatgct tccgatcccg tggtcatggc ccacgctccc gagggggcgt tgttgttcgg
     2161 gggtgttgag acgccctgcc gagtcgacgg tgagggatcg tccgctcttc tgatcgtgaa
     2221 cgacgagccc ctcatcgagg tggccgcgct gatgcgttcg ctgccccatg acctagacaa
     2281 tgctcaggcg gccgctgctc tggccatccg cgccggagct tcccggacgg cctgcgccga
     2341 gactctgctc gggttcgccg gattggcaca ccggatggct ctggtggccg agattgaggg
     2401 cgtccggttc gtggatgaca gtaaggccac cacgccgcac gccacgctg
//
LOCUS       DASCMR010000027         1673 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000152386, whole genome shotgun sequence.
ACCESSION   DASCMR010000027 DASCMR010000000
VERSION     DASCMR010000027.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1673)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1673)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1673
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000152386"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            352..1587
                     /locus_tag="QGG16_00545"
     CDS             352..1587
                     /locus_tag="QGG16_00545"
                     /inference="COORDINATES: protein motif:HMM:NF012503.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HJP23796.1"
                     /translation="MLAELEDKRHDDVRWDEGRTFGLVFDGGAEVRDVAERAARAFLH
                     ENALSTAAFPSLGTIQSELCAWTADLLHGPEGTAGFVTSGGTESILCAVEAARERARA
                     ERGVNEPEIVLATSAHAAFHKGAHLFGLRTRVVDVTGDWTPDLDAMADAISDRTALVV
                     ASAPQYPQGVVDPVTEIAAMAAEAGASCHVDACMGGFVLPFAALEQPQAWSAPPWDLA
                     VEGVTSISADLHKLGYAPKGVSVLLHRSRALRRYQTFDFDGWLGGRYVTPNLQGTRSG
                     LPMAAAWAVVRFLGVDGYRRLVRTALEAADRIRAGVRAMDGLTVLGDPRHHLLSITAD
                     VVADRPLDPYAVGDALASRGWHHDRQAPPDNLHLTVSAGNAPIVDEWLADLADAVDEV
                     RSTGDRCSEPEAGAYSTLE"
BASE COUNT          271 a          585 c          562 g          255 t
ORIGIN      
        1 tcgggtacct cagcaggctc cgatccagtg gatcacccga ggttgctcag cgcgcctccc
       61 agaggttgac ccatgcctcg cacgtctcgg gcggcgccag ccccaatcga atcagcaggc
      121 ggaataggtg ggatccgagg cacagaccga gaaatgcctc cagcaaggcg acggccgaca
      181 cggcgaccac cagcaccgtg gccgtgccgc cgacacctcg tcgaccggat gggaaaacga
      241 gaagggcccg gcaccatcca ctggttcgac cctattgtcg ttcccatctc cactcccacg
      301 cctccccccg actcgaagcg cttccccgca ggtcctacgc cggctgatca ggtgctggcc
      361 gaattggagg acaaacgcca cgacgacgtc cgttgggacg aggggcgtac cttcggcctg
      421 gtgttcgacg gtggcgccga ggtccgtgac gtggccgaac gggcggcccg ggcgttcctg
      481 catgagaacg cgctcagcac cgccgccttc ccgtcactgg gcaccattca gtccgaactc
      541 tgcgcctgga cagctgacct gctccacggc ccggagggga ctgcgggctt cgtgaccagt
      601 ggtgggaccg agagcatcct gtgtgcggtg gaggcggccc gggagcgggc ccgggccgaa
      661 cgcggcgtca acgagccgga gatcgtgctg gcgaccagcg cccatgcggc cttccacaaa
      721 ggagcccacc tgttcggact gcgaacccgt gtcgtggacg tgaccgggga ctggacgccc
      781 gacctcgacg caatggccga cgccatctcc gatcgcacgg ccctggtagt ggcctccgca
      841 ccccagtacc cgcagggggt ggtcgacccg gtgaccgaga tcgcggcaat ggctgccgag
      901 gccggggcgt cgtgccacgt cgacgcatgc atgggcggct tcgtcctccc gttcgccgcc
      961 ctggagcagc cacaggcgtg gtcggctccg ccgtgggatc tagcggtcga aggcgtgacc
     1021 agcatctcgg ccgacctcca caaactgggc tacgccccca agggggtgtc ggtgctgctc
     1081 caccggtccc gggcgctgcg gcgttaccag acgttcgact tcgacggctg gttgggtggg
     1141 cggtacgtca caccgaacct gcagggcacc cggtcgggcc taccaatggc cgccgcatgg
     1201 gccgtggttc ggttcctcgg cgtcgacggc taccggcgtc tggttcgcac cgcgctggag
     1261 gccgccgacc ggatccgggc cggcgttcgg gccatggacg gactgacggt gcttggcgac
     1321 cctcgccacc acctgctctc catcaccgcc gatgtcgtag ccgatcgacc gctcgatccg
     1381 tatgcggtgg gcgatgccct ggcctcccgg ggttggcacc acgatcggca ggcaccacca
     1441 gacaacctgc acctgacggt gagcgccggt aacgcaccga tcgtggacga gtggttggcc
     1501 gaccttgccg atgccgtgga cgaggtgcgg tcaaccggtg accgctgctc cgaacccgag
     1561 gccggcgcat actcgactct ggaataacgg agaaagtcgt gtcctgatca ggtgaacagg
     1621 tcggcggcgt cctcgaagtc gaccagccac gtccgaccgc caccctcgga gtg
//
LOCUS       DASCMR010000028         3685 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000166109, whole genome shotgun sequence.
ACCESSION   DASCMR010000028 DASCMR010000000
VERSION     DASCMR010000028.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3685)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3685)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3685
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000166109"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            517..1983
                     /locus_tag="QGG16_00550"
     CDS             517..1983
                     /locus_tag="QGG16_00550"
                     /inference="COORDINATES: protein motif:HMM:NF012770.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HJP23797.1"
                     /translation="MSDPLRPDWSYLRPMASILSGSPAVSLLGVITATLLTLSLVGCA
                     PEESATGRPVAAPANIGCPGEPVPTELTVTCHRIEVEGASLSVAVLHAPDPDGAPVLF
                     LHGGPGGRAVADRDRWLAPRSKILANHDVVLVDQRGGGNSTPSLDCPEMEHRGPQDNA
                     QEGLAGDRSCRNRLVSAGFEPSTVTVGRIAADLVAVRQALAIDRWHLHGVSFGTRIAL
                     ELLRTDDAAIVSLALDSVVPPDADETADLPDGIVAALTKLEDRCTDDGFCPIGVLEPL
                     RRTLDRLAHDPTVVQVDNRSLTFDDTAFLAASVRTLSRPDGPVALTEAIALADAGRLA
                     EAVDRLAPVDASAGTSRSAGDALAEGAWVAVTCGDQRPGMSFEPTDLNDPIHRAEHGR
                     WLDLRARCAAWKIPSSDPATRTPVRSAVPTLILAGELDPVTPARWAATVARWLDDVEV
                     VVSPRWTHAPSTWNSCAAHLVTRFLDTGDRPTGGSTDC"
     gene            complement(1986..3014)
                     /gene="trpD"
                     /locus_tag="QGG16_00555"
     CDS             complement(1986..3014)
                     /gene="trpD"
                     /locus_tag="QGG16_00555"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HJP23798.1"
                     /translation="MSLEDHGGWPGLLDRLCRSEDLSALETEAILGEILSGEAEPAQI
                     AGFLVGLKVKGETVEETSGLVRAMVSMAEPLVLPDGTIDIVGTGGVASRREASLNVST
                     MACFVAAGGGATVCKHGNRRASSTSGAFDVLEVLGVDIDIAPEQLAAQVVKHRIGFAF
                     ARTFHPAMRFAGPIRAGLGIPTVFNVLGPLSHPGQPLRQLIGAADPALADRMVEVFRA
                     NDSVHTWVVTGHADLDEIALTGPTRVLELREGAVTEWTLDPTDLGLSLADPVDLAGGG
                     PDRNADIARALFDGSETGARRDIVALNAGAGLVVAGIADGIADGLERAMAALADGSAG
                     VVLDSISS"
     gene            complement(3025..3390)
                     /locus_tag="QGG16_00560"
     CDS             complement(3025..3390)
                     /locus_tag="QGG16_00560"
                     /inference="COORDINATES: protein motif:HMM:NF014520.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WhiB family transcriptional regulator"
                     /protein_id="HJP23799.1"
                     /translation="MDTLLDTPVQPGLIPSSATPAASLLVARSETLTALDVEALEGVD
                     TSGQWYLRSACRGLEASIFYPDPDVTEDVTRALAVCAACDVREVCLAHALRRREPTGI
                     WGGTTERERRRVLRRRRLA"
     gene            3462..>3685
                     /gene="rnpB"
                     /locus_tag="QGG16_00565"
     ncRNA           3462..>3685
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="QGG16_00565"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
BASE COUNT          646 a         1298 c         1139 g          602 t
ORIGIN      
        1 tcgcctttcc cgtgctggtt ctcatgctta atctcatgtt gattactcat gtggatcatc
       61 ctgacgaccg gctgtgacag ccccactccc cggggacggt cccaccacca caggtgagcg
      121 gatgacgctg ctggccaaca atgaacgccg aggatgcggc agcaagatgc ggcgcccagt
      181 cggcgctctg gcctccgctt tggaccatcg tgatcggttc ccctgcccct cctagtcaac
      241 gcacgtcggg taaccgagtt ccgtggcggt gaagtgcgcg ggctcacacc gtcaactccg
      301 agccactgga gttctccaca ggataagaac ccgttcccaa agggcccgtc cccaatgagc
      361 agcgacaaac tgcactgcgt gacctcggga ttccaacgga tacccgccgg atcatgattg
      421 agcactgcgg ctacgccctg accgaaccgg tccgccggcc accctccttc cgggcacagc
      481 ccgaaaccac agcgagacgc tgactaccgt ctggcggtgt ccgatcccct ccgccccgac
      541 tggtcctacc tccgacccat ggcctccatc ctctcgggct cccccgccgt ctccttgctc
      601 ggcgtcatca cggccaccct cctgaccctg agcctcgtcg gatgcgctcc cgaggagtcc
      661 gctacaggcc ggccagtggc cgccccagcc aatattggct gcccgggcga gccggtgccc
      721 accgaactca cggtcacctg ccatcgaatc gaggtggaag gcgcttcgct ctccgtcgcc
      781 gtcctacacg cgcccgaccc tgacggggca ccggtccttt tcctccatgg cggacccggc
      841 ggtcgggccg tcgctgatcg ggatcgatgg cttgctcccc ggtcgaagat tctcgccaac
      901 cacgacgtgg tcctcgtgga tcaacgaggc ggtggcaact cgaccccgtc gctggactgt
      961 cctgagatgg aacaccgcgg gccacaagac aacgctcaag agggtctggc cggagaccga
     1021 tcctgtcgca accggctggt ctcggctgga ttcgaaccat ccaccgtgac tgtcggacgg
     1081 atcgccgcag acctggtggc cgtccgacaa gccctagcta tcgatcggtg gcatcttcac
     1141 ggtgtctcgt ttggtacccg gatcgctctc gagctcctcc gcaccgacga cgccgccatt
     1201 gtctccctgg cgctggactc cgtagtgcct cccgacgccg acgagactgc cgacctacct
     1261 gatggcatcg tcgccgctct caccaaactc gaggaccgct gcaccgacga cggtttctgt
     1321 cccatcgggg ttctcgaacc ccttcgtcga acgctcgacc gactggctca cgacccgacc
     1381 gtggttcagg tcgacaaccg gtcattgacc ttcgacgaca ctgccttcct ggccgcgtcc
     1441 gtccgaaccc tgagtcgccc cgacggcccg gtggctctta cagaagccat cgcactcgcc
     1501 gatgccggac gtctagccga ggccgtggac cgcctggcgc cggtagacgc atcggccgga
     1561 accagccgct cggccggtga cgccctggcc gagggggcgt gggtagcggt gacgtgcggc
     1621 gaccaacgcc caggcatgag tttcgaacca accgacctca acgatccaat ccaccgggcc
     1681 gaacacggtc gctggttgga tctccgggcc cggtgcgcag cttggaaaat tccgtcctcc
     1741 gatccggcga ctcggacccc ggtgcgatcg gcggtcccca cgctgatcct ggctggcgaa
     1801 ctggacccgg tcaccccagc cagatgggcc gcgactgttg cccgctggct cgatgacgtg
     1861 gaggtggtcg tgtccccccg ctggacgcac gcaccatcca cctggaattc gtgtgccgcc
     1921 cacctagtca cccggttcct cgacaccggg gaccgcccga ccggagggtc gacggactgc
     1981 tgacctcaac tcgagatcga gtccagaact acgccggcgg aaccgtcggc gagtgccgcc
     2041 atagcccgtt ctaggccatc cgcgatcccg tcggcgatgc cggccaccac taggccggcc
     2101 ccagcgttca gggccacgat gtcgcgacgt gccccggtct ccgaaccatc gaacaaggcc
     2161 cgggcgatgt cagcgttgcg gtccgggccg ccaccggcca gatcgaccgg atcggccaat
     2221 gagagcccga gatcggttgg atccaacgtc cactcggtga ccgccccctc gcggagttcg
     2281 aggacccggg tcggcccggt cagggcaatc tcgtcgagat cagcatgacc ggtgaccacc
     2341 caggtgtgga ctgagtcatt cgcccggaag acctcgacca tccgatcggc cagagcagga
     2401 tcggcggcac ctatcagctg gcggaggggc tgtccggggt gggacagcgg gcctaggacg
     2461 ttgaacaccg tcggaatccc cagcccagcg cggatgggcc cggcgaaccg catcgccgga
     2521 tggaacgtcc gggcgaaggc aaacccgatc cggtgcttga ccacctgtgc ggccaactgc
     2581 tccggagcaa tgtcgatatc gacgccgaga acctcgagga catcaaaggc gcccgaggtc
     2641 gacgaggccc gacggttccc gtgcttgcag accgttgctc ctcctccggc ggccacgaaa
     2701 caggccatgg ttgagacgtt caggctggcc tcgcgacgac tagctacccc accggtgccg
     2761 acgatgtcga tcgtgccgtc ggggaggacc agtggctctg ccatggacac cattgcccga
     2821 acaagtccgc tggtctcctc gaccgtctca cccttgacct tcagtccgac tagaaagcca
     2881 gcgatctgtg caggctcggc ctcgccactc aggatctcac cgaggatggc ctctgtctca
     2941 agcgctgaga ggtcctcgct gcggcacagc cggtccagta gccctggcca gcccccatgg
     3001 tcttccaggc tcatgaggtt ctgatcaggc caaacggcgc cgacgcagca ccctgcggcg
     3061 ctcacgctcg gtcgttccgc cccagatgcc ggtgggttct ctgcgacgaa gggcgtgggc
     3121 gaggcagacc tcgcgcacat cacacgccgc gcacacagcg agtgcccggg tgacgtcctc
     3181 ggtcacgtcg ggatccgggt agaaaatcga tgcctctagg ccacggcagg cactccggag
     3241 ataccactgt ccggaagtgt caactccttc aagcgcctcg acatccagag cggtcagtgt
     3301 ctcagatcga gccaccaaca agctggccgc cggggtcgcc gatgaaggga tgagaccggg
     3361 ctgaacgggg gtatcgagaa gggtgtccat gtcgcgtgcg ttgctagttc gcagcgccgg
     3421 gtgacgcaag ggaaatctcc cgccagactg gtacccgacg gtgagtcgac cgggtgaccg
     3481 cggccggacc cctccggggc gtccgtgctg aggaaggtcg gggctccata ggacaggatg
     3541 ctggctcgca gccagtcggg gtgacccgca ggaaagtgcc acagaaaaca gaccgccgat
     3601 ggctcgggac tcttcggagc gacgagtaca ggtgagggtg aaacggtgcg gtaagagcgc
     3661 accagcggcc ggggcgaccc ggtcg
//
LOCUS       DASCMR010000029         2717 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000167926, whole genome shotgun sequence.
ACCESSION   DASCMR010000029 DASCMR010000000
VERSION     DASCMR010000029.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2717)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2717)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2717
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000167926"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..409)
                     /locus_tag="QGG16_00570"
     CDS             complement(<1..409)
                     /locus_tag="QGG16_00570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23800.1"
                     /translation="MDEAADDPHPDPYPDSDLRPQAVGRRRVVLGIGFGGALLALGRR
                     LPGRPDGGATAVGPTTIPAVPRSSTSRPPEPPTSSTVGADETTTTVDTHRYDLVVAGG
                     RVIDPETGFDAVAHVGIDGDTVMTVATTPLVGRS"
     gene            472..1530
                     /locus_tag="QGG16_00575"
     CDS             472..1530
                     /locus_tag="QGG16_00575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23801.1"
                     /translation="MVDGTLRRVGLLLGTGLLVVTLTVVAGLERGGSDHWVTGRPLAV
                     VSARLVVEPAPARNLDPYRGTGTWADAYDFDPAYAPGKLTVVPTDLALMAETGVRTLF
                     IQASRSDRRAVGLVADPWLLAGFLLAGDAADVAVVAWYLPKWTADDEDLERLLALDRF
                     TVLGRRFAGIAVDIEWNRDDLGAIERSDRLVDLSDRLRRTVGDDPLGAIVMPPVITDE
                     INLAYWPGFPWVELAGRYDVWLPMGYWSFRTEEHADPAFYTTDNIRRLRADLGDPGAV
                     VHAIGGIGAADGTAVVDPGEPLTSIDDLEPFVAALVGEGAIGGSIYDWASMGVDARVR
                     FGQLMGDPFSADLAAWAG"
     gene            1677..>2717
                     /locus_tag="QGG16_00580"
     CDS             1677..>2717
                     /locus_tag="QGG16_00580"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013704.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009307 - DNA restriction-modification
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
                     /protein_id="HJP23802.1"
                     /translation="MTERRGATESPSTTTTSTTSFGVGRRENHDASAFYARFTPPTVS
                     DDDVVVRAPDLGDGCLNGDARDMHQIPDASVALVVTSPPYFVGKDYEVEMERDGVPSS
                     YLEYLGMLRDVFAECVRVLEPGGRIAVNVANLGRKPYRSLSADVIGILQDELGLLLRG
                     EVVWQKAEGATGSVAWGSFRRAANPVLRDMTERVVIASKGRFDRAVPTARRTRDGLPS
                     ESTITTDEFMEATLDVWRIDAEQATRVGHPAPFPVELPRRLIDLYTYRDDLVLDPFLG
                     SGSTLVAAARSGRRGVGFDLDPEYVTLAKQRLADEQRRLAEEPVAAWRRADLSSATAA
                     QEGLFAEVGALGP"
BASE COUNT          399 a          869 c          991 g          458 t
ORIGIN      
        1 ttgaacggcc aaccagcggt gtggtggcca cggtcatcac ggtgtcgccg tcgatgccca
       61 cgtgggccac agcgtcgaac ccggtctccg ggtcgatgac ccgcccgccg gcaaccacca
      121 ggtcgtagcg gtgggtatcg accgtggtgg tggtctcatc agccccaacg gtcgacgatg
      181 tcggtggttc cgggggccgg ctggtggatg agcgaggaac cgccggaatg gtggtcgggc
      241 caacggcggt tgccccacca tctggtctgc ccggaagccg ccgaccaagc gcaaggaggg
      301 cgccgccgaa accgatgccg aggacgactc gccgtctgcc cactgcttgg ggccgcaagt
      361 cggaatccgg gtacgggtcg gggtgcgggt cgtcggcagc ctcgtccacg gagccagacg
      421 ctagtggtgg gccgccccgg accgggtcca ggcggtggct accgtggccg tgtggtcgac
      481 gggacgctac gacgcgtcgg gctcctgctg gggaccggcc tgctggtggt gaccctgacc
      541 gtggtggccg ggctggaacg aggcgggtcc gaccactggg tgaccggtcg accattggct
      601 gtcgtcagtg ctcgactggt cgtcgaaccc gccccggcac gcaacctcga tccctaccgt
      661 ggaaccggta cgtgggccga cgcctacgac ttcgatccgg cctatgcacc ggggaagttg
      721 acggtggtgc cgaccgatct ggctctcatg gccgagaccg gtgtccgcac cctgtttatc
      781 caggcgtcga ggtcggaccg tcgtgccgtg ggcctcgtcg ccgacccgtg gctactggcc
      841 ggcttcctcc tggccggcga tgccgccgac gtggcggtcg ttgcctggta cctacccaag
      901 tggactgctg acgacgagga ccttgagcgc ctcctggctc tggaccgctt caccgtgctg
      961 ggacggcggt tcgcagggat cgcggtggac atcgagtgga accgagacga cctgggggcc
     1021 attgaacggt cggatcggct ggtcgacctg tcggatcggc tgcgacgaac ggtgggcgac
     1081 gatccgctgg gggcgatcgt catgccaccg gtcatcaccg acgagatcaa tctggcgtac
     1141 tggcccggct ttccgtgggt cgaactggcc ggccgctacg acgtctggct gcccatgggc
     1201 tactggtcgt tccggaccga ggagcatgca gacccggcat tctacacgac ggacaacatt
     1261 cgtcggctgc gagctgacct gggcgacccg ggcgccgtcg tgcacgccat tggcggtatc
     1321 ggggcggccg acgggacggc ggtggtggac cccggtgaac cgttgacgtc gatcgacgac
     1381 ctcgaacctt ttgtggctgc attggttggc gagggggcga tcggcggttc gatctacgac
     1441 tgggcatcca tgggtgttga cgcccgggtc cggttcggcc aactcatggg cgacccgttt
     1501 tcggcagatt tagcggcctg ggcgggctga ggccgagaag tcaacgttgt gcccacgggc
     1561 ggacgattcc ctgtggtggt cgaccgcaat tggtccgcgc gcgcgggtcg cgtaccatgg
     1621 acggtccaga tcggcccgag ggtggatggg gctgagtgat ggggaggcga cacctgatga
     1681 ctgaacggcg cggcgcgacc gagagtccgt ccacgacgac gacttcgacg accagcttcg
     1741 gcgtgggacg tcgcgagaac catgacgcct cggcgttcta cgcccgcttc accccgccga
     1801 ccgtgtccga cgacgacgtg gtggtccggg cacccgactt gggcgacgga tgtctaaatg
     1861 gcgacgcccg cgatatgcac cagattccgg atgcatcggt cgccctggtg gtcacctccc
     1921 cgccctactt cgtgggcaag gactacgagg tggagatgga acgtgacggc gtgccgtcct
     1981 cctacctgga gtacctgggg atgctgcgtg acgtgttcgc cgagtgcgtg cgggtgctcg
     2041 agccgggcgg ccggatcgcc gtcaacgtgg ccaacctggg tcgcaagccg taccggagcc
     2101 tgtcggccga cgtcatcggg atcctgcagg acgaactggg gctgctgctc cggggcgagg
     2161 tggtgtggca gaaggccgag ggggcgaccg gctcggtggc ctggggttcg ttccggcggg
     2221 ccgccaaccc ggtgctgcgt gacatgaccg aacgggtggt catcgccagc aagggtcggt
     2281 tcgaccgcgc cgtgccgact gcccgcagga cccgtgacgg cctcccgtcg gagagcacca
     2341 tcaccaccga cgagttcatg gaagccaccc ttgacgtgtg gcggatcgac gccgaacaag
     2401 ccactcgggt gggtcatccg gcgccctttc ccgtcgagct gccacgacgg ctcatcgacc
     2461 tttacaccta ccgggacgac ctggtgctgg accccttcct cgggtcgggc agcacgctgg
     2521 tggcggccgc ccgctccggt cgtcgcggcg tgggctttga cctggatccc gagtacgtga
     2581 cgttggccaa gcaacgccta gccgacgagc aacgtcgcct cgccgaagag ccggtcgcag
     2641 cgtggcgtcg ggccgacctg tccagtgcta cggccgccca ggaggggttg ttcgcagagg
     2701 tgggggcgct cgggccc
//
LOCUS       DASCMR010000030         3713 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000170284, whole genome shotgun sequence.
ACCESSION   DASCMR010000030 DASCMR010000000
VERSION     DASCMR010000030.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3713)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3713)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3713
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000170284"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1000
                     /locus_tag="QGG16_00585"
     CDS             <1..1000
                     /locus_tag="QGG16_00585"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP23803.1"
                     /translation="PTIGVHGTPEQIDRWVPPILEGTDAWCQLFSEPGAGSDLAGLQC
                     KAIRDGDEWIITGQKVWTSGGHTAQKGMLIARTDPEAPKHQGITYFGIDMDQPGIEVR
                     PLREMTGQALFNEVFLDEARVPHDAVIGGLGVGWAVANTTLAFERASLGGGGKQPVSV
                     PPGPTAGRLQARAGDYTERVNRGPDGEGGRGMGTSAMIDLARAVGNADDPIVRQEIVQ
                     LHILGEVNRLNMQRAKAGGSRTGAEGNLAKLAMSELVRRSRDVGNLIIGADGMLAPAN
                     CTTGGVVQEVTVFSPAPAIYGGTDQVQRNIIGERVLGLPKEPGPDKGTPFRDLLQN"
     gene            complement(997..1776)
                     /locus_tag="QGG16_00590"
     CDS             complement(997..1776)
                     /locus_tag="QGG16_00590"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJP23804.1"
                     /translation="MHAATGAMAINRPEVADAPLVVLIHGAGMDRTVWSHQTRWLAHH
                     DTRAVAVDLPGHGYSDGPALGSIAGLAAWVGDLSEALGGPLHVIGHSMGAFIGLEAAA
                     TLGDKIASLVVMGLGAAMPVHPALQTAADDDDPLAADLMAGWMHGPDQKFGTNPTPGM
                     SMTGTSRAVIETSPDGVLAGDLALCGAYDGAVDAGAAITCPTTVVLGTLDRMTPRRGA
                     QPLVDALGHATLVELATSGHAPMMEDPDAVRSALLAHLFPN"
     gene            complement(1811..3106)
                     /locus_tag="QGG16_00595"
     CDS             complement(1811..3106)
                     /locus_tag="QGG16_00595"
                     /EC_number="2.5.1.49"
                     /inference="COORDINATES: protein motif:HMM:NF006004.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase"
                     /protein_id="HJP23805.1"
                     /translation="MVEPDHHRFDTRALHAGQRPDPVTGSRAVPIHQTTSYVFDSVDH
                     AAGLFNLEVSGHLYSRISNPTVAVLEERIASLEGGVGAVCTSSGQAALHLAMATILNA
                     GDHVVASRNIYGGSHNMLNLTMPRFGITTTFVDPRDPGAFDAAIRPETRLVFAETLGN
                     PGIEVLDVTAVAEVAHSHGLPLAVDSTFATPYLMRPIDHGADIVIHSVTKFLGGHGVA
                     IGGVVVDGGRFDWASTGKFPTLSEPYEGYHGITFTEEFGTTALSMRARAEGLRDFGGC
                     MSPANAFYLLQGVETLPVRMARHVDNTHRVIEMLDAHDAVSWISHPAHPSHPDHELAA
                     RLYPKGAGAILSFGVHGGREAGRRFIEAVELASHLANVGDAKTLVIHPGSTTHQQMSA
                     EDLASAGIGEELIRLSVGLEDPDDICADLSRALRASQKA"
     gene            3347..>3713
                     /locus_tag="QGG16_00600"
     CDS             3347..>3713
                     /locus_tag="QGG16_00600"
                     /inference="COORDINATES: protein motif:HMM:NF015411.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HJP23806.1"
                     /translation="MRIGFIGLGNAGGKLAGSLLRNGYDLTVRDLDPEVARSFVDGGA
                     SWADSPREMAEACDVVITCLPSPAACSAVMEADDGVLAGLRAVAEAGADAGGSRIWLE
                     MSTTDESEVRRIGALVVEAG"
BASE COUNT          597 a         1151 c         1342 g          623 t
ORIGIN      
        1 accgaccatt ggtgtgcacg gcacccccga acagattgat cgctgggtgc cgcccatcct
       61 tgaggggact gatgcctggt gtcagctgtt ctccgagccg ggcgccggat cggaccttgc
      121 cggcctgcag tgcaaagcca tccgcgatgg tgacgagtgg atcatcaccg gtcagaaggt
      181 ctggacgtca ggcggtcaca cggcccagaa ggggatgctc attgcccgga ccgatcccga
      241 ggctcccaag caccaaggca tcacctactt cggcatcgac atggaccaac cgggcatcga
      301 agttcgaccg ctccgggaga tgaccgggca ggcattgttc aacgaggtgt tcctcgacga
      361 agcccgggtt ccccacgacg ccgtcattgg cggcctaggc gtcggctggg cggtggccaa
      421 caccacgctg gcctttgagc gggccagcct cggcggcggc ggaaagcagc cggtgtcggt
      481 gcctccgggt ccgacggccg gccggcttca ggcgcgcgcc ggtgattaca ccgagcgggt
      541 caaccggggt ccggacggtg agggcggtcg tggcatgggc acatcggcca tgatcgacct
      601 ggcccgtgca gtgggcaacg ctgatgaccc gatcgtgcgt caggagatcg tgcaactgca
      661 catccttggc gaggtgaacc gactcaacat gcagagggcc aaggccggcg gtagccgcac
      721 cggggccgaa ggcaacctgg ccaagttggc catgagtgaa ctggttcgac gtagccgcga
      781 cgtgggcaac ctgattatcg gagccgacgg gatgctggcc ccggctaact gcaccaccgg
      841 cggggtggtc caggaggtca cggtgttcag cccggcgccg gctatctacg gcggcaccga
      901 tcaggtacag cgaaacatca tcggcgagcg ggtgctcggc cttcccaagg agccgggccc
      961 ggacaaggga acgccgttcc gggacctcct ccagaactag ttcggaaaca ggtgggccag
     1021 aagggctgac cggacggcgt ccggatcctc catcatcggg gcgtgtcccg aggtggccag
     1081 ttcgaccagt gtggcgtgac caagcgcgtc gaccagcggt tgggcgcccc ggcgtggggt
     1141 catccggtcg agcgtgccca gtaccaccgt ggtcgggcag gtgatcgcgg ctcccgcatc
     1201 cacagcgccg tcgtacgccc cgcacagcgc caggtcgccg gccagcaccc cgtcgggcga
     1261 ggtctcgatg acagcccgac tggttcccgt catcgacatt cccggggtgg ggttggtgcc
     1321 gaacttctgg tcgggtccgt gcatccagcc ggccatgagg tcggcggcca agggatcgtc
     1381 gtcgtcggcg gcggtttgca gggcgggatg cacgggcatg gctgctccga gtcccatcac
     1441 gaccagcgag gcgatcttgt caccgagggt ggcagccgct tcgagaccga tgaacgcacc
     1501 catggagtgg ccgattacgt gcagtggccc gccgagggcc tcggacaggt cgcccaccca
     1561 ggcagccagt ccggctatcg accccagcgc cggcccgtcg gagtagccgt gtcccggcag
     1621 gtcgacagcc accgcccggg tgtcgtggtg ggccaaccaa cgggtctggt gcgaccagac
     1681 ggttcggtcc atgccggccc cgtggatcag gacgacgagc ggggcatcgg ccacctccgg
     1741 tcgattgatg gccattgcgc cagtcgccgc gtgcaccgat tggcctgcta cctggattct
     1801 catcggtcga ttacgccttc tgagaggcgc gtagggcccg cgacaggtcg gcacagatgt
     1861 cgtcggggtc ctcgagtccg acagagaggc ggatgagttc ctcgcctatt ccggcggatg
     1921 cgaggtcctc ggcgctcatc tgctggtggg tggtcgaccc gggatggatg accagtgtct
     1981 tggcatcgcc cacgttggcc aggtgcgaag ccagttcgac ggcttcgatg aagcggcgtc
     2041 cggcctctcg tcccccgtgc acgccgaagc tcaggatggc accagcgccc ttcgggtaga
     2101 gccgggcggc tagttcgtgg tcggggtggc tgggatgcgc cggatggctg atccacgaca
     2161 cggcgtcatg ggcgtccagc atctcgatca cccggtgggt gttgtcgacg tggcgggcca
     2221 tgcgcactgg gagggtctcg acaccctgca gcaggtagaa ggcgttggcc gggctcatgc
     2281 agccgccgaa atcgcgcaac ccctcggctc gggcgcgcat agagagggcg gtggtgccga
     2341 actcctcggt gaaggtgatg ccgtggtagc cctcgtaggg ctccgacagc gtggggaact
     2401 tcccggtgga cgcccagtcg aagcgtccac cgtccaccac tacgccaccg atcgccacgc
     2461 cgtgtccgcc cagaaacttt gtcaccgagt ggatgacgat gtcggctccg tggtcgatgg
     2521 ggcgcatcag gtatggcgtg gcgaacgtcg agtcgacggc caacggcagg ccgtgggagt
     2581 gggcgacctc ggccaccgcg gttacgtcga gtacctcgat gcctgggttg ccgagggtct
     2641 cggcgaacac caggcgggtc tctgggcgga tggccgcatc gaaggctccg gggtcacggg
     2701 gatcgacgaa ggtcgtggtg atcccgaacc ggggcatggt caggttcaac atgttgtggc
     2761 ttccgccgta gatattccgg ctggctacca cgtggtcacc agcgttcagg atggtggcca
     2821 tggccagatg cagggccgcc tgcccgctgg acgtgcacac ggcgcccact ccgccttcca
     2881 gtgaggcgat ccgctcctca agcacggcaa cggttgggtt ggagatccgt gagtagaggt
     2941 ggccactgac ctccaggttg aacaagcccg ctgcgtggtc gaccgagtcg aacacgtacg
     3001 aggtggtctg gtgaatgggc acagcccgcg agccggtaac agggtccgga cgttgcccgg
     3061 cgtgcagggc acgggtgtcg aatcggtggt gatcaggttc gaccatgggt ggaacctagg
     3121 ccagtcggag cggcacggtg gtgctggtcc gactatgccc gttcagtgcg agacccactg
     3181 ggccagtcgg tcaagggcct cgtcggtgtg gaaccggggc gcggtgtccc gcacgctgag
     3241 caccacggcg cccgtgtcct ggcggatccg ggcgaacatg acctgagggc aggacacgac
     3301 gagggtcggc taccccgttg gtgtgccgtg tctagagtgc gcggtcatgc gcatcggatt
     3361 tatcggattg ggcaacgccg gcggcaagtt ggctggcagc ctcctccgaa acggctacga
     3421 cctcaccgtt cgtgatctcg accccgaggt ggcccgctcg tttgtcgatg gcggtgcctc
     3481 gtgggctgac tcgccgaggg agatggctga ggcttgtgat gtggtgatca cgtgtctccc
     3541 atcgcccgcg gcctgctcgg cggtcatgga agccgatgac ggggtcctcg ccgggctgcg
     3601 cgccgtggct gaagcggggg ctgatgccgg cgggtcgcgg atctggctgg agatgagcac
     3661 gaccgacgag tccgaggttc gacgtattgg tgccctggtg gttgaggcgg ggg
//
LOCUS       DASCMR010000031         3521 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000170576, whole genome shotgun sequence.
ACCESSION   DASCMR010000031 DASCMR010000000
VERSION     DASCMR010000031.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3521)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3521)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3521
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000170576"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..962)
                     /locus_tag="QGG16_00605"
     CDS             complement(<1..962)
                     /locus_tag="QGG16_00605"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014790.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP23807.1"
                     /translation="MDFTPSDAQQAMVGLADRIMGDHLDIGRHLAVETAGGWFDQNLW
                     EDLASAGLLGIALGADVGGSGLDVVALALLLGVQGSHVAPLPLLPSSVAAVIVDRHGS
                     HEQRHRLLPDVATGGCILTVAVQEFLDDRLSQPSVTFEDGLLHGTKVVVEHLDAASLI
                     LVTVRSPDGPRCVLVDPMAAGIARVEGTSTRRQPVWEVTFEATPAEPLGDHTTVSDLL
                     DHLRLGISATQLGVTERALSLTAEYTSTREQFGRPIATFQAVGQRLADQFVNVGGIRL
                     ATLSAAWRLANGEDATEDLLVSKWWASERATDVANATQHCHGGIG"
     gene            complement(968..2164)
                     /locus_tag="QGG16_00610"
     CDS             complement(968..2164)
                     /locus_tag="QGG16_00610"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP23808.1"
                     /translation="MFIDLTGDQKALQLELRSYFDELMTPEMKDSVSSAEFAENHAYK
                     ALIRQIGSDGWLGVGWPVEYGGRGFTPIEQYIFYDESQAAGCPIPFLSTNTVGPTIRR
                     FGTDAQKDFFLQRILAGVMHFSIGYSEPDAGTDLAALRTRAVRDGDNWVINGQKQFTS
                     LAYNADYVWLAARTDPDAPAHKGITMFLVDTDDPGFTIQPFETFGNTHTTSTFYDDVL
                     VPDSMRVGEVNGGWGLITNQLNHERVSLFPGARLVRITADAVAWARDTIGPDGLRIID
                     HEWVRVKLAECRALARHLDLLNWYVASENTSGRMSPADSSAIKVHGSESMHRVYTLIT
                     EVIGATGHLTEGSPGTTILNAVEASYRSVWVLTFGGGTNEVQRDIIGMAGLGLPRQQR
                     RQSEGR"
     gene            complement(2186..3451)
                     /locus_tag="QGG16_00615"
     CDS             complement(2186..3451)
                     /locus_tag="QGG16_00615"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP23809.1"
                     /translation="MSNTNRPASDDISADDAAFVARVEAFHAEHCVRIDEPAVSDAGP
                     DDPDGLIAARSYQGALTDAGLAGLDIPAEYGGAGLTAHRQELFTRAAAAWHRPDSPLS
                     ISHGMCLPMLAQFGTHEQKSSHLPGVIRGTNIWCQMFSEPGAGSDVAGLSTRAVLDGD
                     EWILDGQKVWTSGAHYCDYGLVVARTDPTLPKHQGLSMFIVDLRTSGVEIRPLVQISG
                     AKGFNEVFFSDVRVPAANILGDVNQGWNLAVSMLMFERVSIGAGGGALNAKRNPELIQ
                     LARDLGRSDEPVIRQALAALHISEEIKGYIGRRIRSAVAAGRVPGPEGSIAKLTGALV
                     ARQARDTAMAIVGTAGQAFGRRSDGDELDERAIAGRKWSGFCVSAAGISLAGGTDEVQ
                     RNIIGERVLGLPREPDPFKGAPWQDIPRN"
BASE COUNT          625 a         1068 c         1188 g          640 t
ORIGIN      
        1 cctatgcctc catggcagtg ctgggtggca ttggccacat cggtggcccg ttccgaggcc
       61 caccacttgg ataccagcaa gtcttccgtg gcgtcttcgc cgttggcgag gcgccacgcc
      121 gcggagagcg tggcaagtcg tatgccgcca acattcacga actggtcagc cagccgttga
      181 cccacagcct gaaaggtggc gatggggcga ccgaactgct ctctggttga ggtgtactcg
      241 gccgtcaagg aaagcgctcg ttcggtcacg cccagctggg ttgctgagat gccgagccga
      301 aggtgatcta ggagatcgct caccgtcgtg tggtcgccta agggttcggc cggcgtcgcc
      361 tcaaaagtga cctcccagac gggttgccgc cgggtggagg ttccctccac acgggcgatg
      421 ccagcggcca tcgggtcgac cagaacgcac cggggcccat ccgggcttcg cacggtgaca
      481 agaatgagcg atgcggcgtc aaggtgctcg accaccacct tggtgccgtg cagaaggccg
      541 tcctcgaagg tcacggaggg ctgtgagagg cggtcgtcaa ggaactcctg gacagcgacg
      601 gtgaggatgc agccgccggt ggctacgtct gggagcaggc gatggcgctg ttcatgggac
      661 ccatgtcggt ccacaatgac ggcggcgacc gacgacggga gcagtggtag gggtgccaca
      721 tgggatccct ggacccccaa cagaagggct agggccacga cgtctaggcc gctaccgccg
      781 acatcggcgc cgagggctat gccgaggagt ccggcggagg cgaggtcctc ccagaggttc
      841 tgatcgaacc atccgccggc agtctcgacg gcaaggtgtc gaccgatgtc cagatggtcg
      901 cccatgattc gatcggcaag gcccaccatt gcctgctggg cgtccgaggg ggtgaagtcc
      961 acgggcccta ccttccctct gattggcgac gctgctggcg tggaaggccc aggccggcca
     1021 ttccgatgat gtcgcgctgc acctcgttgg tgccgccacc gaaggtgaga acccagacac
     1081 ttcggtagga ggcctcgacg gcgttcagga tcgtggttcc gggcgatccc tccgtcaggt
     1141 ggccggtggc gccgatcacc tcggtgatga gggtgtacac gcggtgcatc gactcagagc
     1201 cgtggacctt tatggcggag gagtcagcgg gactcatgcg tccactggtg ttctccgatg
     1261 ccacgtacca gttgagcagg tcaaggtgtc gggccagcgc acgacactcg gccaatttca
     1321 ctcgcaccca ttcgtggtcg atgatccgga gaccatcggg gccaatggtg tctcgagccc
     1381 aggccacggc atcagcggtg atccggacca atcgtgcccc cggaaacaag gacaccctct
     1441 cgtggttgag ttggttggtt atcaggcccc aaccgccgtt tacctcgcct acccgcattg
     1501 agtccggtac caggacgtca tcgtaaaacg tcgaggtggt gtgggtgttg ccgaacgtct
     1561 cgaagggttg gatcgtgaag cccggatcgt cggtgtccac gaggaacatg gtgatgccct
     1621 tgtgggccgg cgcatcaggg tcggtccggg cggccagcca cacgtagtcg gcgttatagg
     1681 cgaggctagt gaactgcttc tgcccgttga tcacccagtt gtcgccatcg cgtactgcac
     1741 gggtacgaag agcagctagg tcggtgccgg catcgggctc cgaatagccg atcgagaagt
     1801 gcatcacccc agccaggatt cgttggagga agaagtcctt ctgggcgtcg gtgccgaacc
     1861 gccgaatcgt cgggccgacc gtgttggtac tcaggaacgg gatgggacac ccggcggcct
     1921 gtgactcgtc gtagaagatg tactgctcga tgggagtgaa gcccctgccc ccatactcga
     1981 cgggccagcc gactcccagc cagccgtcgg atccgatctg tctgatcagg gccttgtacg
     2041 cgtgattttc ggcgaactcg gcgctcgaga cactgtcctt catttcgggc gtcataagtt
     2101 cgtcgaagta ggaacgcagt tccagttgca gggccttttg gtccccggtg aggtcgatga
     2161 acatgggttt cgccgtcgtc gggtattagt tcctgggaat gtcctgccag ggggcaccct
     2221 tgaaggggtc gggttccctc ggcaggccca gaacccgttc accgatgatg ttgcgctgca
     2281 cctcgtcggt gccgccggcc aggcttattc ccgctgcgct tacgcagaag ccggaccact
     2341 tccggccagc gatagctcgt tcgtccagtt cgtcaccgtc gctacgtcga ccgaacgcct
     2401 gaccagccgt gccgacgata gccattgcag tgtctcgggc ctggcgtgcc actagtgcgc
     2461 cggtcagctt ggcgatggat ccctcgggac cgggaacccg cccagcggcc accgccgatc
     2521 ggatgcgccg cccgatgtaa cccttgatct cctcgctgat gtggagggcg gccagggcct
     2581 ggcggatcac cggttcgtct gaccgaccaa ggtcccgcgc caactggatg agttctgggt
     2641 tgcgtttagc attaagggct ccaccaccgg cccctatgga gacccgctcg aacatgagca
     2701 tggagaccgc aagattccaa ccctggttca cgtcaccgag gatgttggcc gccggaaccc
     2761 ggacgtcact gaagaagacc tcattgaagc ctttcgcccc ggagatctgg accaatggcc
     2821 ggatctcgac gccggaagtg cgaaggtcga cgataaacat cgacaggcct tggtgcttgg
     2881 gcagggtggg atcggtgcgg gccaccacga ggccgtagtc gcagtagtgg gcacccgagg
     2941 tccaaacctt ctggccgtcg aggatccact cgtccccgtc gaggactgca cgtgtggaca
     3001 atccggccac atcggaaccg gcgccgggct cggagaacat ctggcaccag atgttggtgc
     3061 cccggatcac gccgggcagg tgggatgact tttgttcgtg ggtgccgaac tgggcgagca
     3121 tgggcaggca catgccgtgc gagatgctga gcggagagtc tggccggtgc caagcagcag
     3181 cggcccgggt aaagagctct tggcggtggg cggttaggcc ggccccgccg tactcggcgg
     3241 ggatgtccaa cccggccaac ccggcgtcgg tcagcgcccc ctggtaggac cgggcagcga
     3301 tgaggccgtc gggatcatcc ggaccggcgt cagaaaccgc aggttcgtcg atccgaacac
     3361 agtgttctgc gtggaaggcc tcgacacgag cgacaaatgc ggcgtcatcg gccgagatgt
     3421 cgtctgaggc cggccggttg gtgttgctca tcgcggtgac ggtaccggtg gctcccgatg
     3481 caatcggcat tggggagggg ccagcgacga gctggaactg g
//
LOCUS       DASCMR010000032         4101 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000174569, whole genome shotgun sequence.
ACCESSION   DASCMR010000032 DASCMR010000000
VERSION     DASCMR010000032.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4101)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4101)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4101
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000174569"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..836
                     /locus_tag="QGG16_00620"
     CDS             <1..836
                     /locus_tag="QGG16_00620"
                     /inference="COORDINATES: protein motif:HMM:NF015431.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HJP23810.1"
                     /translation="GLSQPAMSTSLQELERALGVTLFVRHRGRGLGLLAEGEALLVEA
                     RELLARAAELEERMSASSDGSAGRLVLGSLTTAAPIVVPSLVRRFRDRHPGVDVEIRT
                     GAQAELLEAVASGALHAALTYDLGLGSGIRFVRLADSAPHVLVAADHRLAIEVAVGLD
                     QLVDDPFVMLDLSTSREYYTSLFLAAGVSMRPAMTVTDLSLVRSLVGNGFGWSLGNHV
                     PARDEAQDGSRVAYVPLRTDVPPLGLGLACRSADRGPAVLDAFTEFASSSLRFPRQLE
                     D"
     gene            918..2108
                     /locus_tag="QGG16_00625"
     CDS             918..2108
                     /locus_tag="QGG16_00625"
                     /inference="COORDINATES: protein motif:HMM:NF013696.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HJP23811.1"
                     /translation="MPSISIPSIPAVADLLGELVAYPTESCSPNVDFIDHYADRARRI
                     GAAVDVVSGEAGRANLHLRFGPDAPGGILLSGHTDVVPAGTGWDTDPYVLTEVDGRLA
                     ARGTTDMKGFLAATLVLLEEIDVDSLRAPVHLGLSYDEEVGCIGVRGLLDVLATGSTG
                     AGTCAPEVVVVGEPTGMRLCNAHAGKVAHRIDLTAASGHSSRAGTEPTAVHEGAALVA
                     LVQGLNDSDRGISANVGSIHGGVAVNVLAPSCTLEFEVRHRADTDPDEVLAGVLDAVA
                     DADRRLSAVGGRATSELFIGYPGLDTDPSLAPVVAMADLVGCGAPGTVAFGTEAGLYA
                     DRLGVPSVIVGPGDIADAHRPNETVAPDQLERCGDVLRRTIHRFCSDDGSAVAGTVPV
                     DRLS"
     gene            2122..3375
                     /locus_tag="QGG16_00630"
     CDS             2122..3375
                     /locus_tag="QGG16_00630"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019640.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP23812.1"
                     /translation="MSTATEEKFTTDPWPESPETGEVLARVDALGPVWRERARALDEA
                     VEFPHENFAEAKAAGLHALCLPTEYGGAGWWLPGRFSPWYKVLERMARWETNTAQLLQ
                     VHNHAAGIIAFHSTPEQRDRFLPDIADGAFCASLGSEAHLYENGAEVLESELTQVDGG
                     YRLTARKGFASVAAAAKYLMVWCAVEGDTPYAGRMVFAVVEVDWEGVELLDDWQMLGM
                     RSTISCGVKFDDVFVPDSHVVGTPGGWVTEDQRTFSCAYAANHLGSAQGAFDFLTDYI
                     GGRPDLAGSEAVRVKLGQMDAQLFAARSCLYATAARLDRGDDPDECEADAVRTMHLAK
                     DAVLTIPYQGFDLVGARACHERYPLGQMMRDARTFTLHFRDDLYVERLAQLALGKGFS
                     AKGGRGGSTPFEEGAGATAQATAGA"
     gene            3434..3847
                     /locus_tag="QGG16_00635"
     CDS             3434..3847
                     /locus_tag="QGG16_00635"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HJP23813.1"
                     /translation="MTHQRIRPFNTKETYPEQNLDNDLSQGVVARGTMVFLRGQVAQD
                     LDTRESLHTGDAGAQTAKTMENIAMLLAEAGSEMSHICRIVVYLTDIRYREAVYQEMG
                     RWLQGVHPCSTGIIVSALARPEWVVEIEVTAVIPD"
     gene            3876..>4101
                     /locus_tag="QGG16_00640"
     CDS             3876..>4101
                     /locus_tag="QGG16_00640"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23814.1"
                     /translation="MTPQPETSALLSGLRTVANGPLSAAVNMPPAMYHSETVLALEQE
                     RAFGRDWVSPGLAAEIPEAGDHLVWSIADQP"
BASE COUNT          622 a         1320 c         1402 g          757 t
ORIGIN      
        1 tcgggctgtc ccagcccgcc atgtcgacct cgctgcagga gctggagagg gctctcgggg
       61 tgacactgtt cgtgcggcac cggggtcgtg gcctcggcct gttggcggag ggcgaggcgc
      121 tattggtgga ggcccgggag ttgctagccc gggcggccga actcgaagag cgtatgtcgg
      181 cctcgtcgga cggctcggcg gggcggctgg tgctgggttc tctgaccacc gctgcgccca
      241 tcgtggtgcc gtctctggtc cgtcggtttc gtgaccggca tccgggggtg gatgtggaga
      301 ttcggaccgg ggcccaggcc gagttgttgg aggcggtggc gtccggtgcg cttcatgcgg
      361 cgttgaccta cgacctgggg ctgggctccg gtatccgctt cgtccggttg gccgattcgg
      421 caccccacgt gctggtggcc gctgaccacc gactggccat tgaggtagcg gtgggcctcg
      481 atcaactggt cgacgacccg ttcgtgatgc tggacctgtc gaccagccgc gagtactaca
      541 cgtcgctgtt tctggctgcc ggggtgtcga tgcgtccggc catgacggtg accgacctct
      601 cgttggtgcg ttcgctggtc ggcaatgggt ttgggtggtc gctgggcaac cacgtcccgg
      661 cgcgggacga ggcccaggac ggttcccggg tggcctatgt accgttgagg accgacgtac
      721 cgccgttggg ccttggcttg gcctgccgga gcgctgatcg tggtccggcc gtgctggatg
      781 ccttcacgga gttcgccagt tcgtcgctgc gattcccacg acagttggaa gactgaccgt
      841 tctatatagg taatacgaat ccagtagatc aaaagcatcc ctttgacgga tggctcgaca
      901 tgcaccagca tttgggggtg ccttcgatct ccatcccttc gatccctgct gtggcggacc
      961 tgctggggga gctagtggcg taccccaccg agagttgctc tcccaacgtc gacttcatcg
     1021 accactacgc ggatcgggcc cggaggatcg gcgctgcggt cgacgtggtg tccggtgagg
     1081 cggggcgagc caacctgcac ctccgcttcg gtccggatgc accgggcggg atcctgttgt
     1141 cgggtcatac cgacgtggtt cccgccggga ctggttggga tacagatccc tacgtcctca
     1201 ccgaggtgga cggacgactt gccgcccgcg gtaccaccga catgaagggc ttcttggccg
     1261 ccacactcgt gctgcttgag gagatcgacg ttgactccct ccgggccccg gtccacctgg
     1321 gcctcagtta cgacgaggag gtcggctgca tcggcgtacg gggtctgctc gacgtgctgg
     1381 ctaccgggtc cacgggtgcc ggaacgtgtg cccctgaggt cgtggtggtg ggcgaaccta
     1441 cggggatgcg actatgcaac gcccacgccg gcaaggtcgc ccaccggatc gatctcactg
     1501 cggcttccgg gcattccagc cgggccggga ctgaaccgac cgctgtacac gagggcgctg
     1561 ctctggttgc gctggtccaa ggcctgaacg attccgatcg cggcatcagc gccaacgtgg
     1621 gatcgattca cggcggggtg gcggtcaacg tgttggcccc gtcgtgcacg ctcgagttcg
     1681 aggtgcgtca tcgggccgac accgatcccg acgaggtgct ggccggtgtc ctggacgcgg
     1741 tggccgacgc cgatcggcga ctgtcggccg tgggcggacg tgccacctcc gagttgttca
     1801 ttggctaccc gggcctggac accgatccct cgctggcccc ggtcgtcgcc atggccgacc
     1861 tggtgggttg cggcgcaccg ggcaccgtgg cgtttggtac cgaggccggc ctttacgccg
     1921 accggttggg cgtgccgtcg gtcatcgtcg gacccggcga catcgcagac gcccaccgtc
     1981 ccaacgagac ggtggccccc gaccaacttg agcggtgcgg tgacgtgctg cgtcgaacca
     2041 tccaccgttt ctgttccgac gacggctcgg ccgttgcagg gactgtccca gttgaccgtc
     2101 tcagttaagg gagacccccc catgagtacc gctaccgaag agaagttcac caccgacccg
     2161 tggcccgagt cccccgaaac cggcgaggtc ctagcccggg tcgatgccct gggcccggtc
     2221 tggcgggagc gcgctcgcgc tctagacgaa gccgtcgagt tcccgcacga gaacttcgct
     2281 gaggccaagg ctgccggtct acacgccctc tgcctcccca ccgagtacgg cggcgctggc
     2341 tggtggctgc ccggtcgctt cagtccctgg tacaaggtgc tggagcgaat ggcccggtgg
     2401 gagaccaaca ctgcccagtt gctccaggtg cacaaccatg cggcgggcat tatcgccttc
     2461 cactccacgc ctgagcagcg cgaccggttc cttcccgaca tcgctgatgg ggccttttgt
     2521 gcctcgttgg gctcggaggc gcacctgtac gagaacggcg ctgaggtcct cgagtccgag
     2581 ttgacccaag tcgacggcgg ttaccgactg acggcccgca agggattcgc ctcggtcgcc
     2641 gctgccgcca agtacctgat ggtgtggtgt gccgtggagg gtgacacgcc gtatgcgggt
     2701 cggatggtgt tcgcggtggt ggaggtggac tgggagggcg tcgagttgtt ggacgactgg
     2761 cagatgttgg gtatgcgatc caccatctcc tgtggcgtga agttcgacga cgtgttcgtg
     2821 cccgacagcc acgtggtggg cacccctggc gggtgggtca ccgaggacca acgcaccttc
     2881 tcctgtgcat acgccgccaa ccacctgggt tcggcccagg gggctttcga cttcctgact
     2941 gactacatcg gcgggcgccc cgacctggct gggtcggagg ctgtacgggt gaagctaggc
     3001 cagatggacg cccagctatt cgccgcccga tcctgcctgt acgccacagc ggcccggctg
     3061 gaccggggcg acgatcctga cgagtgcgag gccgatgcgg tgcgcactat gcatctggcc
     3121 aaggacgcgg tactgaccat cccctaccaa ggattcgacc tggtaggcgc ccgggcctgc
     3181 cacgagcggt acccgctggg ccagatgatg cgtgacgccc ggacctttac cctccacttc
     3241 agggacgacc tttacgtgga gcgcctggcc caattggccc tcggtaaggg cttctcggcc
     3301 aagggcggcc gcgggggatc cactcccttc gaggaggggg cgggggctac ggcccaggcc
     3361 accgctgggg catgatctgc tccacccgaa cgccgccatc cacgccgtca gttatgagaa
     3421 agcgtccgac gccatgaccc atcagcgcat ccgccccttc aacacgaagg agacgtaccc
     3481 cgagcagaac ctcgataacg acctcagcca gggtgtggtg gcccgcggaa ccatggtctt
     3541 cctgcggggc caggtcgccc aggacctcga cacccgggag tcgttgcaca ctggcgacgc
     3601 cggagcccag acggccaaga ccatggagaa catcgccatg ctgctggccg aggctggctc
     3661 ggagatgtcc catatctgcc ggatcgtcgt ctacctgact gacatccgat acagggaggc
     3721 cgtctatcag gagatgggaa ggtggctcca gggcgtccac ccgtgctcga cgggaatcat
     3781 cgtgtccgcc ttggctcgcc ccgagtgggt ggtggagatc gaggtcaccg cggtgatccc
     3841 cgactgaccg gcccaaccga acggatctcc atctgatgac ccctcagccc gagaccagcg
     3901 ccctgttgtc tggtttgcgt accgtggcca acggaccgct gtcggctgct gtcaacatgc
     3961 cgccggctat gtatcactct gagacggtgc tggccctcga acaagagaga gcttttgggc
     4021 gggactgggt gtcgcctggt ctggcagccg aaatcccaga ggcgggcgac cacctggtct
     4081 ggtcgatcgc cgaccagcca g
//
LOCUS       DASCMR010000033         5373 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000175351, whole genome shotgun sequence.
ACCESSION   DASCMR010000033 DASCMR010000000
VERSION     DASCMR010000033.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5373)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5373)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5373
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000175351"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..192)
                     /locus_tag="QGG16_00645"
     CDS             complement(<1..192)
                     /locus_tag="QGG16_00645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23815.1"
                     /translation="MQGIPTNGDRSTAGRLAAIGAVFCWSAGNVVVALVDMGGLAIAF
                     WRLALGALVYGIGLHLAGRR"
     gene            349..1419
                     /locus_tag="QGG16_00650"
     CDS             349..1419
                     /locus_tag="QGG16_00650"
                     /inference="COORDINATES: protein motif:HMM:NF024376.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate/phosphite/phosphonate ABC transporter
                     substrate-binding protein"
                     /protein_id="HJP23816.1"
                     /translation="MKIRSLLTILLALVLVASACGSDDAGTATGDGTWPDKITFGFVP
                     STEQESLADDIQPFMDVLTEALGIEVEGIVTTDYTGLVTAMGTGKADLGAFGPFGYVL
                     AQQQFGNMEVLIQAIRYGSPTYHGQWMTNDPSMCDTAPESATALENTADGLAQVGALD
                     AVALQVGVYFGDSGKALGESVDAGDVSPGTSCMADLSKVAGKRVAFTSESSTSGYLFP
                     ALQLIEAGIDPVNDITPIFTGGHDAAVVAVYNGDADVGLSYDDARRTLRKEKVDVGDK
                     VMVFNITDEVPNDVVAASSLLPDSLQTAVYDAISSYLATEEGEAVFDEAYGWTDIRRA
                     VDSDFDVVRAAAEALGITEPLG"
     gene            1476..2246
                     /gene="phnC"
                     /locus_tag="QGG16_00655"
     CDS             1476..2246
                     /gene="phnC"
                     /locus_tag="QGG16_00655"
                     /EC_number="7.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015416 - ABC-type phosphonate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015716 - organic phosphonate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter ATP-binding protein"
                     /protein_id="HJP23817.1"
                     /translation="MIEFKNVSVTYRGGVRALRHVDLTIDDGEFVVVVGLSGAGKSTL
                     LRAMNGLVPTTEGSITVGGTEVVGARSAELRDIRSRIGMIFQTFNLVHRTSVVNNVLM
                     GRLAEVPAWRSTLGLWPADDREAAMVALERVGIVEKAYVRAADLSGGQQQRVGIARAL
                     AQEPSVMLADEPVAALDPVTSRQVMGDLQRINRDLGITTLINLHFLDLAREYGRRLVG
                     LREGEIVFDGDIDDVTDETFLEIYGRAITDDDLKASGG"
     gene            2243..3082
                     /gene="phnE"
                     /locus_tag="QGG16_00660"
     CDS             2243..3082
                     /gene="phnE"
                     /locus_tag="QGG16_00660"
                     /EC_number="7.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015416 - ABC-type phosphonate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015716 - organic phosphonate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter, permease protein
                     PhnE"
                     /protein_id="HJP23818.1"
                     /translation="MSPPPETGRVDNRVASRKTTSSRPTPPRVRPRTWVMAAAVAAYT
                     VAAGRTVGFNPSTFWQVWSNPLWEKFWPIPWDWVLDRHNVIEPLIETFQIAIVSTILG
                     CGLALPVALAMSPLTSPNRVVLVVTRSIMNVVRAVPDLFWAKLLVTAVGIGAFAGSWA
                     LSVFSLAVMVKLFSETVDGADPRPLEAARAAGGRHMPVVRTGVLPTVLPEYVAYGLYV
                     FELNIRASLVLGLVGAGGIGRVVEAQRQYFRFDRVLGVLVIVFVVVFVIEQVSVAIRK
                     RLV"
     gene            3147..4031
                     /gene="phnE"
                     /locus_tag="QGG16_00665"
     CDS             3147..4031
                     /gene="phnE"
                     /locus_tag="QGG16_00665"
                     /EC_number="7.3.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0015416 - ABC-type phosphonate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015716 - organic phosphonate transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter, permease protein
                     PhnE"
                     /protein_id="HJP23819.1"
                     /translation="MEAYPSDGGRPVAPRRAGRRWGLAALVVVAVVWSISGLEVTMDR
                     LLSAPGNAWDVFRRMAPPAFGEAIDRGVPGKVLESVHIAWIGTMIGAVFSLPLAFLAA
                     GNVSPAWIRTPVRQLFNVIRAVPELILAVILIPITGLGPWAGALAIGIHSVGTLGKWA
                     TEAIEGVDPGPLEAVAATGGRWVSGMRWGVLPQILPVVTSQWLFRFEINVRASAVLGM
                     IGAGGVGSELVSQLVFRNFPAVGAVLAMTIVVVLAIDTASAAVRRRIIRGAVPGADDG
                     EADRNAAVLTDLTGIRTP"
     gene            4028..4957
                     /locus_tag="QGG16_00670"
     CDS             4028..4957
                     /locus_tag="QGG16_00670"
                     /inference="COORDINATES: protein motif:HMM:NF012692.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HJP23820.1"
                     /translation="MTAAGRATIGLDVGGTKAAAVLVDPLTGTVLDRERASSAGSAEN
                     LVTTLTDLVDTLRERSTGLHVEVGAVGLGIAGLVDRDGMVRWSPNLPSAVGHPVAADL
                     AGGSGLPVAATNDATAATLAESRLGAGRDCDDVALVTLGTGIGAGFVVDGRLLRGAHG
                     FAGEPGHMVVDPGGPEHTTGQRGPWEALASGNALGRMAAEAGFDSGTAVVAAMAAEDS
                     RAAEVFDRWCREVAQGLANLVVVLDSRRIVLGGGLVEVGEPLRLGVASWLEQLTPGAD
                     SRPPVEVVLAELGSDAGALGAGLLAGDLLAGDD"
     gene            complement(4990..>5373)
                     /locus_tag="QGG16_00675"
     CDS             complement(4990..>5373)
                     /locus_tag="QGG16_00675"
                     /inference="COORDINATES: protein motif:HMM:NF013866.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HJP23821.1"
                     /translation="ATNGDAVGVVGFCMGGMLTLLIAALEGDRVACAAPYYGAPLGDG
                     APDWSGLTAVVEGHMAEHDDFFPIEDVMALGDDLRTMGRDVTFHIYDGTGHPFANEED
                     PFGTYDADAAALAWTRTLALLDAHL"
BASE COUNT          837 a         1783 c         1844 g          909 t
ORIGIN      
        1 acggcggccc gcgaggtgga gcccgatccc gtagaccagc gcaccgaggg ccagacgcca
       61 gaaggcaatg gccaggcccc ccatgtcgac cagggccacg accacgtttc ccgccgacca
      121 gcaaaagacc gccccgatcg ccgccaggcg accggccgta gaacggtcgc cattcgtggg
      181 aatgccctgc atcgccgcac cctaggacgg gcacacgacg gcgtagttcc ggcacccgat
      241 tttcgataac cggtttccgg cacccgtcgg cgtccacatg gagaggccgg attggctacg
      301 gtcgcgccta aggcggaccg ctggggacgc cactcgacag gaggacccat gaagatccga
      361 tctctgctca ccattctgct ggccctggtg ctcgtcgcct cggcctgtgg aagcgacgat
      421 gccggcacgg caaccggcga cggcacatgg cccgacaaga tcaccttcgg gttcgtcccg
      481 agtacggaac aggagtccct tgccgacgac atccagccct tcatggacgt gcttaccgag
      541 gccctgggca tcgaggtcga gggcatagtc accaccgact acaccggcct ggtcaccgcc
      601 atgggcaccg gcaaggccga cctgggcgcc ttcgggccct ttggctacgt cctggcccag
      661 cagcagttcg gcaacatgga ggtactgatt caggccattc gctacggctc gccgacctac
      721 cacggccagt ggatgaccaa cgatccctca atgtgcgaca ccgcacccga gtcggccacc
      781 gctctcgaga acaccgctga cggcttggca caggtcggtg cactggacgc ggtcgccctt
      841 caggtcggcg tgtacttcgg ggactccggc aaggccctcg gtgaatccgt ggatgccggc
      901 gacgtttcgc ccggaacctc gtgcatggct gacctttcca aggttgccgg caagcgggtg
      961 gccttcacct cggagtcatc gacctcgggt tacctgttcc cggcgctgca gctcatcgaa
     1021 gcgggcatcg acccggtgaa cgacatcacc ccgatcttca ccggaggcca cgacgccgcg
     1081 gtggtagccg tctacaacgg cgatgccgac gtcggcctgt cctacgacga cgcccgccgt
     1141 accctccgca aggaaaaagt ggacgtgggc gacaaggtga tggtgttcaa catcaccgac
     1201 gaggtaccca acgacgtggt ggccgccagt tcgctgctgc ccgactcgtt gcagacggcc
     1261 gtatacgacg ccatcagttc ctacctcgcg accgaggaag gtgaggccgt gttcgacgag
     1321 gcctacgggt ggacggatat ccgccgagcc gtcgactccg acttcgacgt ggtacgcgct
     1381 gccgccgaag ccctgggcat caccgagccg ctgggctgac gccgacccgt cgccccgaag
     1441 cacgagggta agacctgacg cggggccctg acccgatgat cgaattcaag aacgtctcgg
     1501 tgacctaccg gggcggggtc agggcactgc gccacgtcga cctgacgatc gacgacggcg
     1561 agttcgtcgt cgtggtcggg ctttcgggcg cgggcaagag cacgttgctc cgggccatga
     1621 acggcctcgt accaaccacc gaagggtcga tcaccgtcgg cggcaccgag gtggtgggtg
     1681 cccgcagcgc cgagttgcgc gacattcggt cgcgcatcgg aatgatcttc cagacgttca
     1741 acctcgtgca ccgcacgtcg gtggtgaaca acgtcctgat gggacgccta gcagaggtcc
     1801 cggcctggcg atccacgctc gggctctggc cagccgacga ccgggaggcc gccatggtgg
     1861 ccctcgagcg ggtaggcatc gtggagaagg cttatgtccg ggccgctgac ctgtccggtg
     1921 gccagcaaca gcgcgtgggt atcgcccggg cgctcgccca ggagccgtcg gtgatgctgg
     1981 ccgacgaacc ggtggccgcc ctggatccgg taaccagccg ccaggtgatg ggcgacctcc
     2041 agcgcatcaa ccgggatctc ggcatcacca cgctgatcaa cctccacttc ctggacctgg
     2101 ctcgcgagta cgggcggcgc ctggtcggcc ttcgggaggg cgagatcgtt ttcgacggcg
     2161 acatcgacga cgtgaccgac gagaccttcc tcgagatcta cggccgggcc atcaccgacg
     2221 acgatctgaa ggcgtccggc gggtgagccc gccaccggaa accgggcgag tcgacaacag
     2281 ggtcgccagt cgcaaaacga cttcctcccg acccaccccg ccacgagtcc gaccacggac
     2341 ctgggtcatg gccgccgcgg tggcggccta caccgtggcg gccggacgca cggtcggatt
     2401 caacccgtcc accttctggc aggtctggtc caatccgctg tgggagaagt tctggcccat
     2461 cccttgggac tgggtcctgg accgacacaa cgtgatcgaa ccgctgatcg agacgttcca
     2521 gatcgccatc gtgtcgacaa tcctgggttg cggactggct ctcccagtag cgctcgccat
     2581 gtcgccactg acctcgccca accgagtggt gctcgtggta acccggtcga tcatgaacgt
     2641 ggtgcgggcc gtaccggacc tgttctgggc caagttgttg gtcaccgcag tgggtatcgg
     2701 ggccttcgcc gggtcctggg ccctatcggt gttctcactg gccgtcatgg tgaagctttt
     2761 cagcgaaacc gtcgatgggg ccgatccccg gccattggag gccgcccggg ccgctggcgg
     2821 tcgccacatg ccggtggtac gaaccggcgt gctacccacc gtgcttccgg agtacgtggc
     2881 ctacgggctc tacgtgttcg aactgaacat ccgagcctcc ctggtcctcg ggctggttgg
     2941 ggccggcggt atcggacgag tggtggaggc tcaacggcag tacttcaggt tcgaccgtgt
     3001 gctgggcgtg ttggtcatcg tgttcgtggt ggtgttcgtg atcgagcagg tcagtgtggc
     3061 catcagaaag cgactggtct gaggtggcct ccaacccgcc tcccgccgat ggcggctccc
     3121 caccactggc ggagggttcc tcgttgatgg aggcctaccc gtccgacggc ggtaggccgg
     3181 tggcaccgcg gcgagcaggc cgtcggtggg ggctggccgc tctggtagtc gttgccgtgg
     3241 tctggtcgat ctccggcctc gaggtcacca tggaccgcct cctcagtgcc ccaggcaacg
     3301 cgtgggatgt gttccgtcgg atggcgccgc ccgcgttcgg tgaggccatc gaccggggtg
     3361 tacccggcaa ggtcctcgag tcggtgcaca tcgcctggat cggcacgatg atcggagcgg
     3421 tcttctcgct gcccttggcc ttcctggccg ccgggaacgt ctcccccgcg tggatccgaa
     3481 ccccggtccg acagctcttt aacgtcatcc gggccgttcc cgaactgatt ctggccgtca
     3541 tactcatccc gatcacaggc cttggcccgt gggccggggc cctagccatc ggcattcact
     3601 ccgtagggac gcttggtaag tgggctaccg aggccatcga gggcgtggat cccggaccac
     3661 tggaggccgt ggccgctacc ggggggcggt gggtgtcagg catgcggtgg ggggtactcc
     3721 cccagatact tccggtggtc acgtcgcagt ggttattccg cttcgagatc aatgtccggg
     3781 cttccgcggt gctgggcatg atcggcgctg gtggggtggg ctcggaactg gtgtcccaac
     3841 tggtgtttcg gaacttcccg gcggtaggcg ccgtgctggc catgaccatc gtcgtggtgc
     3901 tggcaatcga caccgcctcg gccgccgtcc ggcgacggat catccgggga gcggtcccag
     3961 gggccgacga cggcgaggct gaccgcaacg ctgcggtgtt gaccgacctg accgggatac
     4021 gtaccccttg accgccgctg gacgggccac cattgggcta gacgttggcg gcaccaaggc
     4081 cgctgcggtg ctcgtcgacc cattgacggg cacggtccta gatcgagaac gggcgtccag
     4141 tgccggatcg gccgagaatc tcgtgaccac cctgaccgat ctcgtcgaca ccctccggga
     4201 gcgctcgacc ggtcttcacg tggaggtcgg cgccgtaggt ctgggcatcg ccggcctggt
     4261 ggaccgtgac ggcatggtcc ggtggtcgcc caacctgccg tcagccgtag gccatccggt
     4321 ggccgccgat ctggcaggcg gtagcgggct cccggtggcc gccaccaacg acgctacggc
     4381 agccaccctg gccgagtccc gcctcggtgc cggccgggac tgcgacgacg tcgctctggt
     4441 caccctcggc accggcatcg gcgccgggtt cgtggtcgat ggacgactat tgcggggtgc
     4501 ccacgggttc gctggcgaac cgggccatat ggtggtggat ccgggcggcc ccgagcatac
     4561 gactggtcag cggggcccat gggaggcctt agcgtcaggc aacgccctgg gtcggatggc
     4621 cgccgaggcc ggcttcgact cggggaccgc ggtggtggcc gccatggccg ctgaagactc
     4681 cagagcggcc gaggtgtttg accggtggtg ccgggaggtg gcacaggggc tggccaacct
     4741 ggtggtcgtg ctggatagtc gacggatcgt gctgggcggt ggtctcgtcg aggtcggcga
     4801 gccgctgcgg ctcggtgtgg cgtcgtggct ggaacagttg accccgggtg ccgactcgcg
     4861 acctcccgtc gaggtggtgc tagccgagct ggggtccgac gccggtgcac tgggtgccgg
     4921 cctacttgcc ggcgacctcc tggcgggcga cgactgacaa cggccccgat acccggtgga
     4981 cgctcccgac tacaggtggg cgtctagcag ggcgagggtg cgggtccaag cgagggcggc
     5041 cgcgtcggcg tcgtaggtgc cgaacgggtc ctcctcgttg gcgaacggat gccccgttcc
     5101 gtcgtagatg tggaaggtca cgtcccgacc catggtccgg aggtcgtcac ccagagccat
     5161 cacgtcttcg atcgggaaga agtcgtcgtg ttcggccatg tggccctcga ccacggccgt
     5221 caacccggac cagtcgggtg caccgtctcc cagcggggcg ccgtagtacg gggcggcaca
     5281 ggccacccgg tcgccctcga gggcggcgat cagcagggtg agcattccgc ccatgcagaa
     5341 gccgaccacc ccgacggcgt cgccgttggt tgc
//
LOCUS       DASCMR010000034         3762 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000179140, whole genome shotgun sequence.
ACCESSION   DASCMR010000034 DASCMR010000000
VERSION     DASCMR010000034.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3762)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3762)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3762
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000179140"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..291
                     /locus_tag="QGG16_00680"
     CDS             <1..291
                     /locus_tag="QGG16_00680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23822.1"
                     /translation="DGLWNRIGENLLYDARAYASWQKPDQRTSWQVDATDLATLRAGG
                     QHAILTPEECVDLIRQTGAAVSHPLCGGIDPAIGWESLQLMADEVLPSLAAG"
     gene            305..1105
                     /locus_tag="QGG16_00685"
     CDS             305..1105
                     /locus_tag="QGG16_00685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonase/enoyl-CoA hydratase family protein"
                     /protein_id="HJP23823.1"
                     /translation="MPDLLIDRDGPVMVLTMNRPSRRNAMTLAMFARLADAWDEIDAD
                     ESIRVCILTGSGDHFCAGMDLRAMAGDVDASDDYDVAGRMERDGSGWIYDGLLKTRHP
                     RVPVIAAVEGNAIAGGTEILQGTEIRVAGESATFGVSEARWSLYPGGGSAVRLARQIP
                     FTEAADILLTGKHVSATEAKSLGLIGHVVPDGTALDRAREVAAAVASNGPLAVEAILR
                     TLRETPGMTEDEAYSFEEPLSRAVFSSRDAKEGPRAFAEKRAPDFRRG"
     gene            complement(1102..1773)
                     /locus_tag="QGG16_00690"
     CDS             complement(1102..1773)
                     /locus_tag="QGG16_00690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23824.1"
                     /translation="MDRPYVLGVDLDGVCGDYTEAFRTVVAEELGCSLDDLPLERSWD
                     FSEWGLDEEEFERLHHHAVTERRILSWMPVLEGAADVLWRLSDAGVWIRIITHRLYVN
                     WSHATAIADTVEWLDRVRIPYRDICFMGDKPEVGADLYIDDGPHNVEALREVGNRVII
                     FDAPYNQHLGGTRAQTWTECEQLVLRDAADRGYEFQVSLPGLDQGADRLDDPGPADPV
                     AEAVD"
     gene            complement(1793..2545)
                     /locus_tag="QGG16_00695"
     CDS             complement(1793..2545)
                     /locus_tag="QGG16_00695"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJP23825.1"
                     /translation="MGRFDGRVALITGAASGIGRATALRMAGDGAKIVGFDRDVAGLD
                     AVAAEVVASGGAMTTVAGDVSRRTDCGAAVDAAVATHGRLDVLANIAGVVWAERVADI
                     TEEGWNRMMEINVSGSFWCAQAALPHLIESRGNIVNIASNAGLMGQAYTVAYSTTKGA
                     VVNMTRALAMEYVKEPVRINAVAPGGVNSPMSQNFKMPDDLDFSLMQPYMGFRKMADP
                     SELANVIAFVASDEASRMHGAIVSVDGGLTAG"
     gene            complement(2640..3317)
                     /locus_tag="QGG16_00700"
     CDS             complement(2640..3317)
                     /locus_tag="QGG16_00700"
                     /inference="COORDINATES: protein motif:HMM:NF024922.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoglutarate-dependent dioxygenase AlkB"
                     /protein_id="HJP23826.1"
                     /translation="MPNVLLPGPSGLQGSLFGGGPLRLSLLESTVRHTDLDDDCRIDY
                     VAGWIAGADELFLDLLAGLPWQSHRRWMVDHEVVEPRLSTSISEPSAPLRAMADSLTD
                     HYYRGYVAAWANLYRNGHDSVAWHGDRHRPGSLHDDVALISTGAPRTFRVRPRGGGPS
                     LAWTLTAGDLLVMRGPVQQRFEHCVPKASSAGPRISVAFRCPSGREFDQVVNSGPSGP
                     RRLDHRL"
     gene            complement(3453..>3762)
                     /locus_tag="QGG16_00705"
     CDS             complement(3453..>3762)
                     /locus_tag="QGG16_00705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23827.1"
                     /translation="ILTLIVLAMIFQGVLAVLNSILDTVGVNSILGSVPVVGSNLNLI
                     WAYLFVVISDIGGWGYGASTEILGMGDFGSDVGSALAITAFIPVKDAALSALSKGVAR
                     "
BASE COUNT          688 a         1199 c         1235 g          640 t
ORIGIN      
        1 gatggccttt ggaatcgcat cggcgagaat cttctatacg acgcccgggc ctatgcctcg
       61 tggcagaagc ccgaccagcg caccagttgg caggtcgacg ccaccgacct ggcaaccctc
      121 cgggctggcg gccagcacgc catcctcacc ccggaggagt gcgtggactt gatccgccaa
      181 accggagcgg ccgtttccca tccgctctgt ggaggcatcg acccggccat tggttgggag
      241 tcactgcagt tgatggccga cgaagtcctg ccgtccctgg ccgccggcta acgaggagaa
      301 ccgagtgcct gatctactga ttgaccgtga cggccccgtc atggtgctca ccatgaatcg
      361 cccatcccgg cgaaacgcca tgacgttggc catgttcgcc cgtctggccg acgcctggga
      421 cgagatcgac gccgacgaga gcatccgggt gtgcatcctc accggtagcg gtgaccactt
      481 ctgtgccggg atggacctcc gggccatggc aggcgatgtg gacgctagcg acgactacga
      541 cgtggcgggt cgtatggagc gcgacggatc cggttggatc tatgacggcc tgctcaaaac
      601 ccgtcacccc cgggtgccgg tgatcgctgc cgtggagggg aacgccatcg ccgggggaac
      661 cgagatcctc cagggtacgg agattcgggt ggccggggag agcgccacgt tcggggtctc
      721 cgaggcccgc tggtcgctgt atccgggtgg tggatcggcg gtccgcctgg cccgtcagat
      781 tccgttcacc gaggcggccg acatcttgct caccgggaag cacgtgtcgg cgaccgaggc
      841 gaagtcattg ggcctgatcg gtcatgtggt ccccgacgga acagcgttgg accgggcccg
      901 tgaggtcgcc gcagcagtgg cgtctaacgg ccctctggcc gtggaagcca tcctccgtac
      961 ccttcgggag acaccgggca tgaccgagga cgaggcctat tcctttgagg agccccttag
     1021 tcgggccgta ttctcttctc gggacgcgaa ggagggcccg agggccttcg ccgagaagcg
     1081 ggcgcccgac ttccgacggg gctaatcgac ggcttcggct accgggtcgg ctgggcccgg
     1141 atcgtcgagt cggtctgcgc cctggtcgag gccgggaagc gatacctgga actcgtagcc
     1201 ccggtcggcg gcgtcgcgca gcaccagctg ctcgcattcg gtccacgtct gggcccgggt
     1261 gccaccgaga tgctggttgt agggcgcatc gaaaatgatg accctattgc cgacctcacg
     1321 aagcgcttcg acgttatggg gcccgtcgtc gatgtagagg tcggcaccca cttcgggctt
     1381 gtcgcccatg aagcagatgt cgcggtacgg gatacgtacc cggtccagcc actcgacagt
     1441 gtcggcaatg gcagtggcgt ggctccagtt gacatagaga cgatgggtga tgatccggat
     1501 ccacacaccg gcatcagaga gtcgccagag gacgtcggcc gccccctcaa gaaccggcat
     1561 ccacgagagg atccgacgct cggttaccgc atggtggtgg aggcgctcga attcttcttc
     1621 gtccaggccc cactcggaga aatcccaaga acgttccagc ggaagatcgt ctagcgaaca
     1681 tcccaactct tcggctacca cggtacggaa tgcctctgtg tagtccccgc acacaccgtc
     1741 gaggtccaca ccgaggacgt agggccgatc catggatccg acggtagtcg ggtcagcccg
     1801 cggtcaggcc accgtccact gagacgatgg ccccgtgcat gcgactggcc tcgtcggacg
     1861 ccacgaaggc gatcacgttg gccagttcgc ttgggtccgc catctttcgg aagcccatgt
     1921 agggctgcat cagggaaaag tcgaggtcgt cgggcatctt gaagttctgg ctcatgggac
     1981 tgttgacgcc gcccggtgct acggcgttga tccggacagg ctccttgacg tactccatgg
     2041 ctagtgcccg ggtcatgttg accaccgcgc ccttcgtggt gctgtaggcc accgtgtagg
     2101 cctgtcccat taggccggcg ttcgaagcga tattcacgat gttgccgcgg ctttcgatca
     2161 gatgggggag cgcagcctga gcacaccaaa aactgcctga cacgttgatt tccatcatgc
     2221 ggttccagcc ctcctcggtg atatcggcca cgcgctcagc ccacaccacg ccggcgatat
     2281 tggctaggac gtcgaggcgc ccgtgggttg ccactgccgc gtccaccgct gcgccgcagt
     2341 cggtccgcct ggagacgtcg ccggcaaccg tggtcatggc gcctccggag gcgaccactt
     2401 cggcggccac ggcgtcgaga cccgcaacgt cccggtcgaa gcccacgatc ttcgccccgt
     2461 cgccggccat gcgcagagcg gtggcccgcc ctattcccga agccgctccg gttatgaggg
     2521 ccacccgtcc gtcaaaccgt cccatgtcgc atcctctcgt ggcttcagcc gtgtggcgct
     2581 gatcgctcga ttgaaggtac cggccgctgg tcaggtaaca ggagtcggcc cctgctggct
     2641 cacagccggt ggtccagacg gcggggcccg gacggaccgg aattaacaac ctggtcaaac
     2701 tcgcgaccac tgggacaacg gaaggcgacg ctgatccgcg ggccagcaga ggacgccttg
     2761 ggtacgcagt gctcgaaccg ctgctggacc ggcccacgca tcacgagcag gtcgccagct
     2821 gtgagagtcc atgccagcga gggcccgcca ccgcgcgggc gaactcggaa cgtacggggg
     2881 gcacctgtcg agatgagggc cacgtcatcg tggaggctgc ccggacgatg ccggtcaccg
     2941 tgccaggcca cactgtcgtg gccattccgg tagaggttgg cccaggcggc cacgtagccc
     3001 cggtagtagt ggtccgtgag ggaatcggcc atcgcgcgca ggggagccga cggttcgctg
     3061 atgctggtcg agagtcgagg ttctacaacc tcgtggtcga ccatccaccg acggtgactc
     3121 tgccagggaa ggcctgcgag gaggtcgagg aacaactcgt cagctccggc tatccatccg
     3181 gccacatagt caatcctgca gtcgtcatcc aggtcggtgt gtcggacggt ggactcgagc
     3241 agtgaaagtc ggagtggacc gccaccgaag aggctcccct gaaggcccga ggggccgggg
     3301 aggaggacgt tgggcacggc cccattgtac cgagacccga acacacgttc gtgcaccggt
     3361 cccaggtgga cgttcacggt ggacgtgccg gcccctaaaa cgaggaaagc cccgtctccc
     3421 ggaggagacg gggctttcct gctcgaactt gattagcgag ctacgccctt gctgagcgcc
     3481 gaaagagcag cgtccttgac agggatgaag gccgtgatcg caagagcaga gccgacgtcg
     3541 gaaccgaagt cgcccatgcc caggatctcg gtagaggccc catagcccca gcccccgata
     3601 tcactgatca cgacgaagag atacgcccag atcaggttga ggttggatcc cacgacggga
     3661 accgacccaa gaatcgagtt gacaccaacg gtgtcgagga tgctgttgag aacggccagc
     3721 acgccctgga agatcattgc cagaacgatg agcgtaagaa tt
//
LOCUS       DASCMR010000035         5990 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000180174, whole genome shotgun sequence.
ACCESSION   DASCMR010000035 DASCMR010000000
VERSION     DASCMR010000035.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5990)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5990)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5990
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000180174"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(186..1589)
                     /gene="lpdA"
                     /locus_tag="QGG16_00710"
     CDS             complement(186..1589)
                     /gene="lpdA"
                     /locus_tag="QGG16_00710"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR01350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HJP23828.1"
                     /translation="MVVGEVASPVDLLVIGAGPGGYAAALRAARLGRDVTLVERGAIG
                     GTCLNVGCIPSKTLIEVADAYALTGRIGSWGIDATSTVDMGRVRAHLAGVVSDLTSGV
                     SRLLADAGVRVLPGHGRFTRPGRVSVERGDTVEFLDPRDVIVATGSRPIELPDVPLDG
                     DRVVGSAELLSTDTLPDRLVLVGGGYVGIELGCAFAKLGSEVTIVESEDRVLASFGVR
                     TTRLVERGLRGLGVGLCLGHLAVGVDDHGLIVEQVGGENSGARVTLPADRIGVVVGRR
                     PDADSVAMTRSGATLEPSGHVAVDATRRAADGVYAIGDLTSGPALAHKATAEAEVAAD
                     AACGLPAAFDPTTIPMVVFGDPQVMTVGLTRDEATKAGMEPSAFQFPLGASGRARTMG
                     DTEGTVTVVADTDGTVIGVQAVGAHVAERAGEAVLAVETAATVEDLAGTIHAHPTMGE
                     TLMEAALGLAGRPIHTR"
     gene            complement(1594..2868)
                     /locus_tag="QGG16_00715"
     CDS             complement(1594..2868)
                     /locus_tag="QGG16_00715"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012424.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoamide acetyltransferase family
                     protein"
                     /protein_id="HJP23829.1"
                     /translation="MAHVFRLPDIGEGLDEAEIVEWFVAIGDVVARDQALVEVLTDKA
                     SSELPSPVSGTVLSLGAAEGVRIRVGEVLIEIDDGSDTADAGALRPPSAAESVKDPVS
                     GSTPQPSDTQRSATTTRPKAAPATRRLALQSGVDLNTVTGTGPAGRITADDVRNAETP
                     VSASRPKPSTRLVSLPTDAGSQPMSSTLGQMPPGRHPLRGLRGVVARNMVQAWTEIPH
                     IHTMDELDASLLVDFRTRVRSMDRPGAAQVTPLTIAAVAAARALRRFPVVNGRVEGHP
                     GDVIVIPEEVNLGIATATDRGLVVPVVHNAGTLDLFTMAERIASLVAAARAGDLTIAD
                     LSGATFTITNYGSLGGRFATPIIPPGQGAILGLGAIAERPVAVGGEVLARPTLPVVLG
                     ADHRLIDGDLAETFRKAVIDDLIEPLHLLIEA"
     gene            complement(2880..3869)
                     /locus_tag="QGG16_00720"
     CDS             complement(2880..3869)
                     /locus_tag="QGG16_00720"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HJP23830.1"
                     /translation="MTGTSEMNMLQAINEALHGEMARDERVVLLGEDIGQVGGVFRAT
                     EGLFEKFGADRVVDTPLAEGVIVGSAVGLAMAGLVPVAEIQFLGFSYQAMHQIAGQVA
                     RLRYRSQGRFEPAITIRAPFGGGVRTPEMHSDSLEGQLANIPGLKVVTPATAADAKGL
                     LASAVRDSDPVMFLEPLRGYRGIRGEVPDGDHVVPLGLARSAREGDDLVIIAWSYQVE
                     LACRVADSLAEEGLSVAVLDLRSLVPLDIEAIAEAVDRCGRAVVVEEASPTGGFAGEV
                     VATIVEECFWSLEAPVVRVSGFDVPYPVGMLEDTFVPDEARIAAAVRRTLETA"
     gene            complement(3866..4858)
                     /locus_tag="QGG16_00725"
     CDS             complement(3866..4858)
                     /locus_tag="QGG16_00725"
                     /inference="COORDINATES: protein motif:HMM:NF012880.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016624 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, disulfide as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HJP23831.1"
                     /translation="MTRPSDEQLRAILVDMVEARTQAARLWNLQRQGQVGTLAPIDGH
                     EAVVAATAHALDPTHDWIMPQYREPLALQRFGPEVLEQYMLYNIGHPDGSRFPPSVRV
                     APLQISLATQIPHAVGLAWGMTLQDEPGVTTVFFGDGSSSEGDFHEAANLAGVLKAPV
                     ILLCVNNQWAISTPLHQQTAAETLADRAVGYGMPGIRIDGNDAAAVFDAVDEARRRAL
                     DGGGPTLIEAVVYRLGAHTTADDPTRYVPAEDLEAARRDDPIERLADHLAGLGLWDDK
                     IRSIVETEAMTRIDEAFERAIAQPLATDAIFDHCFATDTPRVARQRAALLDGAP"
     gene            5181..5672
                     /locus_tag="QGG16_00730"
     CDS             5181..5672
                     /locus_tag="QGG16_00730"
                     /EC_number="1.-.-.-"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: protein motif:HMM:NF013412.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HJP23832.1"
                     /translation="MGESRRDRIRMNKEELAALIADQKSLQVACHDRDGAIHLSTLWF
                     AMVEDRFAFGTYTKSQKIVNLKRDDRITVLLEDGTKYDQLRGAMVRGRAVLHAEDGAG
                     GADEVRRVARAVMRRYEPDIPEEHFEGAVELWAAKRTVVIVEPEKVITWDHSKLGGAG
                     PYG"
     gene            5730..>5990
                     /locus_tag="QGG16_00735"
     CDS             5730..>5990
                     /locus_tag="QGG16_00735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23833.1"
                     /translation="MESLFAVQDEDVVRGQLEHRRAHLSERASLMDAEAARAVTAAEV
                     ERVGLERLDHVRRQHRYEGEVAAVESRLVELNEKLYGGAITSP"
BASE COUNT         1009 a         1955 c         2044 g          982 t
ORIGIN      
        1 ggtccacttg taacctccgg aggccacctt ccgggcgatg tcgacatgat cgctgaggag
       61 ggagtcattg aacggcggcg tgtcggcggc gggcggctcg gattcgggca tcgggggacg
      121 gtaccgcgcc caccagtgat ggtcagagtc gcacttcaac atgctgttgc ccggtagcgg
      181 ttcggttagc gggtgtggat ggggcgacca gccagcccca gagccgcctc catgagagtc
      241 tcgcccatgg tggggtgggc gtgtatggtg ccggccaggt cctccacggt tgctgccgtc
      301 tccacggcca gtaccgcttc accggcccgt tcagccacgt gggcccccac cgcctggacg
      361 ccgatcaccg tgccgtcggt atcggccacc acggtgaccg tgccctcggt gtcgcccatc
      421 gtccgggccc gccccgaagc gcccaacggg aactggaagg ccgacggttc catgccggct
      481 ttggtcgcct catcgcgggt gagccccacc gtcatgacct gcgggtcgcc gaacaccacc
      541 atcggaatgg tcgtcggatc gaacgccgcg ggtaggccac aggccgcgtc ggccgccacc
      601 tcagcttcgg cggtcgcctt gtgggccagc gccggcccgg aggtgagatc tccaatggcg
      661 taaaccccgt cggcggcccg tcgggtcgcg tcaacggcca cgtggcctga cggctccaga
      721 gtcgcccccg atcgggtcat ggccaccgag tcggcatcgg gtcggcgtcc gactaccacg
      781 ccgattcggt cggcgggcag ggtgacccgt gcgccggagt tttcgccgcc cacctgctcg
      841 acgatcagcc cgtggtcgtc gaccccgacg gccaggtggc ctaggcacaa cccgactccg
      901 aggccacgca gcccgcgttc gacaaggcgg gtggtccgga cgccgaagct cgccagcacg
      961 cggtcctcag actcgacgat ggtcacctcg ctgcccagct ttgcgaaggc gcagcccaac
     1021 tcgattccga cgtagccgcc gccgaccagc accagccggt cggggagcgt gtcagttgac
     1081 agcaattcag ccgaaccgac gacccgatcc ccgtccaggg gcacgtcggg tagttcgatg
     1141 ggacgggaac cggtggccac gatgacgtca cggggatcca ggaactccac ggtgtcgcca
     1201 cgctcgaccg agacccggcc gggccgggta aatcgtccgt gccccggcag cacccttacc
     1261 ccagcatcgg ccaacagcct cgacactccg gaggtgaggt cgctgaccac gcccgccaga
     1321 tgggcccgga cccgacccat gtcgactgtg gaggttgcgt cgatgcccca cgagccgatc
     1381 cgcccggtta gggcgtaagc gtcggcgact tcgatgagcg tcttggacgg gatacatccg
     1441 acattgagac acgttccgcc aatggccccg cgttcgacga gagtcacgtc gcggcccagg
     1501 cgggcggcgc ggagggccgc tgcgtagccg cccggtccgg caccgatgac caacaggtca
     1561 accggactgg ctacctcgcc gacgaccacc ggttcaggct tcgatgagca ggtgtagcgg
     1621 ctcgatgagg tcgtcgatca cggctttccg aaacgtctcg gcgaggtcgc cgtcgatgag
     1681 ccggtggtcg gcgcccagaa ccaccggaag ggtgggtcgg gccagcacct cgcccccgac
     1741 ggccacgggt cgttctgcga tcgcaccgag tccgaggatg gcgccttggc ccggtggaat
     1801 gatcggggtg gcaaaccgcc cgcccagcga gccgtaattg gtgatggtga aggtcgcgcc
     1861 agagaggtct gcgatcgtga ggtcgccggc tcgggcagct gcgaccagtg aggcgattcg
     1921 ttcggccatg gtgaagaggt cgagcgtgcc ggcgttgtgc accacgggta cgacaagccc
     1981 ccggtcagtc gctgtggcga tgccaaggtt gacctcctct ggaatgacga tgacgtcgcc
     2041 tgggtggccc tccacgcggc cgttgaccac ggggaatcgc cggagcgccc gtgccgctgc
     2101 gacggcagca atggtcagag gcgttacctg cgccgctccc ggacggtcca ttgagcggac
     2161 ccgtgtccgg aagtcgacca gcagcgatgc gtcgagttcg tccattgtgt ggatgtgagg
     2221 gatctccgtc cacgcctgga ccatgttgcg ggccaccacg cctcggaggc ctcggagggg
     2281 gtggcggccc ggcggcatct ggcccaatgt gctggacatt ggctgggaac cagcgtcggt
     2341 gggtagcgag acgagacgag tggatggctt tggtctagag gcggacaccg gagtctctgc
     2401 gttccgcacg tcgtcggcgg tgatcctccc tgcgggaccg gttccagtca ccgtgttcag
     2461 gtccactccc gattggaggg ccagccgtcg ggtggccggc gcggccttcg gtcgagtggt
     2521 tgtcgccgat cgctgtgtgt ccgatggttg cggagtggat ccggagacgg ggtccttgac
     2581 cgattcggcc gccgatggtg gtcggagtgc cccagcatcc gccgtgtccg agccgtcgtc
     2641 gatctcgatg agtacctcgc ccaccctgat acggacgccc tcggcggctc cgagtgacaa
     2701 caccgtgccg gacaccggtg acggcagttc cgaactggcc ttgtcggtga gtacctccac
     2761 cagagcttgg tcgcgtgcga cgacgtcacc gatcgccacg aaccattcga cgatctcagc
     2821 ttcgtcgagg ccctcgccga tatcgggtag tcggaagacg tgggccacgg aaccgacgct
     2881 caggcagtct cgagggtgcg acggaccgca gcggcgatcc gggcctcgtc gggaacgaaa
     2941 gtatcttcga gcatccccac cggataaggc acgtcgaagc ccgacacgcg gaccactggt
     3001 gcttccagtg accagaaaca ctcctcgaca atggtggcca ctacctcgcc tgcgaaaccg
     3061 ccggtcgggg aggcttcctc cacgaccacc gcccggccac accgatccac cgcttcagcg
     3121 atggcctcga tatcgagggg aaccagactc cggagatcga ggacggcaac cgataatccc
     3181 tcttcggcca gggagtcggc gacccggcag gccagttcga cctggtaact ccaggcgatg
     3241 atcaccaggt cgtcgccctc gcgtgccgaa cgcgccaacc cgaggggcac tacatggtcg
     3301 ccatctggca cctcgccacg gatgccccgg tagccgcgca gtggttcgag aaacatcacc
     3361 gggtcggaat cgcgcaccgc agaagccagc agacccttgg cgtcggcggc ggtggccggc
     3421 gtgaccacct tgaggcccgg gatattggcc aactggccct ctagtgagtc cgagtgcatc
     3481 tccggggtcc ggacgccacc gccgaacgga gcccggatgg tgatggctgg ttcgaaccgt
     3541 ccctgagagc ggtaccgcag tcgggcaacc tgcccggcga tctgatgcat ggcctgatag
     3601 gagaagccga ggaactggat ctcggcgacc gggaccaatc cggccatggc cagcccgaca
     3661 gccgatccga caatcacgcc ctcggccagc ggcgtgtcga ccacccggtc agcaccgaac
     3721 ttctcaaaga ggccctcggt ggcccggaag acgccaccta cctggccgat gtcttcgccg
     3781 aggagcacca cacgctcgtc gcgggccatc tccccgtgca aggcctcgtt gatggcttga
     3841 agcatgttca tttcggaggt accggtcatg gggcgccgtc cagtagcgca gcccgctgac
     3901 gggccacccg gggggtgtcg gtcgcaaagc agtggtcgaa gatggcatcg gttgccaggg
     3961 gctgggcaat ggcccgttcg aacgcctcgt cgatacgggt catggcttcg gtctcgacga
     4021 ttgagcggat cttgtcgtcc cagagcccga gcccggctag gtggtcggcc agacgctcga
     4081 tcgggtcgtc ccgacgggcg gcctcgaggt cctcggctgg gacataacgg gtgggatcgt
     4141 cggctgtcgt gtgggcgccg agcctgtaca caacggcttc aatgagcgtt ggtccacctc
     4201 catccagtgc ccgtcgccgc gcctcgtcga cagcgtcaaa caccgcagct gcgtcatttc
     4261 cgtcgatacg gatgccaggc attccgtagc cgacggcacg atcggccaac gtctcggcgg
     4321 cggtctgctg gtgtagcggt gtggaaatgg cccactggtt gttcacgcac agaaggatca
     4381 ctggcgcctt caggacgcca gccaggttgg ctgcttcgtg gaagtcccct tcagaactgg
     4441 acccgtctcc aaagaacacg gtggtcacgc caggttcgtc ttgcagggtc atgccccagg
     4501 ccaatccgac ggcgtgggga atctgggtgg ccagcgaaat ctgcagcgga gcgacccgca
     4561 ccgatggcgg aaacctgctg ccgtcgggat ggccgatgtt gtagagcatg tactgctcga
     4621 gcacctcagg gccgaagcgt tggagggcaa gaggctcccg gtactggggc atgatccagt
     4681 cgtgcgtggg gtccagggcg tgggccgtgg cggccaccac ggcctcgtgt ccgtcgatgg
     4741 gggcgagagt gccgacctgg ccctgacgtt ggagattcca cagtcgggcg gcctgggtcc
     4801 gggcttccac catgtctacg aggatggctc gaagttgttc gtccgacggt cgggtcacac
     4861 cgatgaacct agccgcgggc gtctcagggg ttgccggtca caggtgtccg aagtcactag
     4921 gttcggcacg gtctgggggt atacctgtcg gtaacttgtt gtccaacagc ggtttccatt
     4981 ccccccttgg gagccgcaca tacctccggc ctgaactccc cccggttcca gaggccgaga
     5041 gtgaccgcac gccccgcccc cccggtgggg cgtgcgcagt tttgtggcca tgaccagcga
     5101 tgcctaccat ccatgggccg gaacgatgtc tgaccggcgc ccggcacgga aaggtgacgg
     5161 gtcgagacga gggggacccg gtgggggaga gtcgacgtga ccgcataagg atgaacaagg
     5221 aggaactggc ggccctcatt gcggaccaga agagccttca ggtggcgtgc cacgaccggg
     5281 acggcgccat ccacctttcc accctctggt tcgccatggt cgaggatcgt ttcgccttcg
     5341 gcacctacac gaagtcgcag aagatcgtga atctgaaacg ggacgaccgc atcactgtcc
     5401 tcctcgaaga cgggacgaag tacgaccagc tccgcggggc gatggtcagg ggacgggccg
     5461 ttctccacgc cgaggacggt gcggggggcg ccgatgaggt ccggcgggta gcccgggccg
     5521 tgatgcgtcg ctacgagccg gacattcccg aggaacactt cgagggcgcg gtggaactgt
     5581 gggccgccaa gcgcaccgtg gtgatcgtgg agccggagaa ggtcatcacc tgggaccact
     5641 ccaaactcgg cggtgccggc ccgtatgggt agtaatgaag cgatctggtc cgagatcccc
     5701 cgggcgtcgc cggacctatg gtgacggcca tggaatccct cttcgctgta caggacgagg
     5761 atgtcgttcg tggccaactc gaacatcgtc gagcgcacct gtccgagcgc gcctcgttga
     5821 tggacgctga agccgcccgg gccgtcacgg ccgccgaggt tgaacgcgtc ggcctggagc
     5881 gtctcgacca cgtccgacgt cagcaccggt acgagggcga ggtggccgcc gtcgagagcc
     5941 ggttggtcga gttgaacgag aagctctacg gcggcgccat tacgtcgcca
//
LOCUS       DASCMR010000036         2933 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000182222, whole genome shotgun sequence.
ACCESSION   DASCMR010000036 DASCMR010000000
VERSION     DASCMR010000036.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2933)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2933)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2933
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000182222"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1022
                     /locus_tag="QGG16_00740"
     CDS             <1..1022
                     /locus_tag="QGG16_00740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23834.1"
                     /translation="KHGGVQLMPAAVPFPEVRPDGYEWLGDEPVFDPTLHLDIQPPTG
                     VTMLADLGYRLDEIAATATPVAFSTPFRILSDEGAMVLLDTARRLRVFQQNLRDRIEN
                     GVRGACYRSRWLRDLCLSSEVTEMMAHVYGTAVAPHTMPLHLGHLNYEPANVGDAVDK
                     WHHDTLPLDYVMMVSDPATLPGGRFEVFLGTKDDAATLAAAGKRPPADRVLVPDFPGP
                     GWAIALHGNMVVHRGGPLDSVAERITMVNGYVSLDRSGDDQSRSRDLVGVDDPAVLAT
                     EWARHAAWRGVGRLEKLVDDLPFGIGNERAADQLEEAITDVQQAIRDLRADPPPMEHY
                     EHGVE"
     gene            1036..1917
                     /locus_tag="QGG16_00745"
     CDS             1036..1917
                     /locus_tag="QGG16_00745"
                     /inference="COORDINATES: protein motif:HMM:NF017532.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HJP23835.1"
                     /translation="MSTFASLPLTEEQVTAFWSDGYVRMDDAVSATDLVELQASVASW
                     VEESRSHDRPFGTTMDGRARFDVQPGHSAKEPALRRVASPQEVCDVHLRIMRDSPLVD
                     AAAQLVGPDLAVNNVKTNCKQPGSNTEVKFHQDFAYEAHSNDDMLAVLLFVDDVTSDN
                     GPLEVIPGTHRGPIFEHWQEGVFTGTIADEDLAGLDTPVACHGTAGTACLMHTRLIHG
                     SAPNLTDVPRTLAIFSYRSEDSRILHPNHIPSVHEGEVVRGVATGRIRAMPYEMALGE
                     MPSTASFFDQQAQETRR"
     gene            1914..2702
                     /locus_tag="QGG16_00750"
     CDS             1914..2702
                     /locus_tag="QGG16_00750"
                     /inference="COORDINATES: protein motif:HMM:NF036686.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0036361 - racemase activity, acting on
                     amino acids and derivatives [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/glutamate racemase family protein"
                     /protein_id="HJP23836.1"
                     /translation="MISELRELKFDTDSGFGSRARIGLVVLENDQTVEAELASLWPEG
                     VAAFATRIPMEDRVTAETLLAMEVRIPEAAGLLPEIMGFDVIGYGCTSAATLIGEERV
                     SAALHRAHPEVPNTNPISAVLAAMKALGARRIAVITPYNAEVTTGIVSLLEDRGLDVA
                     AAGSFLEESDANVARITEASVAGAVREMVANCTGDSGSEALDAVFVSCTSLRAYGVAA
                     DLEAELGVAVISSNLAFGWHLLRLAGINDDLSGLGRLFSRELER"
     gene            2699..>2933
                     /locus_tag="QGG16_00755"
     CDS             2699..>2933
                     /locus_tag="QGG16_00755"
                     /inference="COORDINATES: protein motif:HMM:NF013486.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family N-terminal
                     domain-containing protein"
                     /protein_id="HJP23837.1"
                     /translation="MTEIALPERGFPESEFMARAARAQAMMAERGLDALLVCTEPEVR
                     YLTGFHTPFWQSPTRPWFVILPAEGRPVAVIPGI"
BASE COUNT          549 a          911 c          939 g          534 t
ORIGIN      
        1 gaaagcatgg gggagtccaa ctgatgccag cggcggtgcc atttcccgag gtccgacccg
       61 atgggtacga gtggctaggc gacgagccgg tgttcgatcc gacactccac ctggacatcc
      121 aaccacccac cggtgtcacc atgttggccg atctcggcta tcggctagat gagatcgccg
      181 cgacggctac cccggtggcc ttctcgacgc cgttccgcat tttgtccgac gagggagcga
      241 tggttttgct ggacacggcc cgccgactac gtgtgtttca gcaaaacctc cgagatcgca
      301 tcgagaacgg ggtccgtggt gcctgctacc ggtcgcggtg gcttcgggac ctgtgccttt
      361 cgtcagaggt caccgagatg atggcgcatg tgtacggcac ggccgtggca ccccacacca
      421 tgccgcttca cctcgggcat ctcaattatg agcccgccaa cgtgggagac gctgtcgaca
      481 agtggcatca cgacaccttg cctcttgact acgtgatgat ggtcagcgac ccggcgaccc
      541 tcccaggggg tcgcttcgag gtctttctgg ggacgaagga cgacgctgcg acacttgccg
      601 cggccggaaa gcgtcccccg gccgatcgag tgctggttcc cgactttcca ggccccggat
      661 gggccatcgc gctacacggc aacatggttg tccatcgtgg tgggcctttg gactctgtgg
      721 ccgagcgcat cacaatggtc aacggctacg tgtctctgga ccgcagcggt gacgatcagt
      781 cccgctcacg cgatctggtc ggagtcgatg atccggcggt gttggccacc gagtgggccc
      841 ggcatgccgc ctggcggggg gtcggcagat tggagaagtt ggttgacgac ctgccattcg
      901 gcatcggcaa cgagcgggcg gccgatcaac tcgaggaggc gatcaccgac gtgcaacaag
      961 cgatccggga tctccgcgca gacccgccgc ccatggaaca ctacgaacac ggcgtcgaat
     1021 gacaggatcc ccatcatgag tactttcgcc tcattgcctc tcaccgaaga gcaggtgaca
     1081 gccttctggt ctgacggtta cgtcaggatg gatgacgctg tgtcagccac tgacctggtc
     1141 gagctccaag cctcggtcgc ctcttgggtg gaagagagta ggagccacga ccgcccgttc
     1201 ggcacgacga tggacggccg ggcacgcttt gacgtacagc ccgggcacag tgcgaaagag
     1261 ccggcgctgc gccgcgtggc gtccccgcag gaggtttgcg acgtccacct tcggatcatg
     1321 agagacagcc cgctggtcga cgcggcagcc cagctggtgg gccccgacct cgcggtcaac
     1381 aacgtgaaga ccaactgcaa gcaaccgggc agcaacacag aggtcaagtt ccaccaggac
     1441 ttcgcctacg aggcccacag caacgacgac atgctggccg tcttgctatt cgtcgatgac
     1501 gtgacctccg acaatgggcc cttggaggtc atcccgggca cccatcgcgg ccccatattt
     1561 gaacactggc aggagggtgt gttcaccggg accatcgccg acgaggacct tgcgggcctc
     1621 gacacgccgg tggcctgcca cggaacggcc ggtacggcgt gcctgatgca cacccgttta
     1681 atccatgggt cggcgcccaa cctgaccgac gtgccccgga ccctggccat ctttagctac
     1741 cggtccgagg acagtcgaat cctccacccc aaccacattc cgagtgtgca cgagggcgag
     1801 gtggttcgcg gtgtggcaac cggccggatt cgtgccatgc cctacgagat ggccctcgga
     1861 gaaatgccat ccacagcgtc attcttcgac cagcaggccc aggaaacccg gagatgattt
     1921 ctgaactgag ggaactcaag ttcgataccg attcgggctt cgggagtcga gcaaggatcg
     1981 gcctagtggt actggaaaac gaccagaccg tggaggcgga gttggcctcg ctatggcccg
     2041 agggggtagc cgccttcgcc acccgcattc ccatggagga ccgggtgacc gctgagaccc
     2101 tgctggccat ggaagttcgg attcccgaag cggccggact acttccggaa atcatgggtt
     2161 ttgacgtcat cggctacggc tgtacctcgg ctgccaccct gatcggagag gagcgggtgt
     2221 cggccgccct gcatcgggcc catcctgaag tacctaacac aaacccaatt agcgccgtgt
     2281 tggcagccat gaaggcactt ggtgcgcgtc gcattgccgt gatcacgccc tacaacgctg
     2341 aggtgacaac cgggattgtc agtttgctag aggaccgtgg gctagacgtg gccgccgccg
     2401 gatcgttcct tgaggagagc gacgccaacg tggctcgcat caccgaagct tcagtggcag
     2461 gcgccgtccg ggagatggtc gccaactgca ccggcgactc gggctcagaa gcattggacg
     2521 ccgtgttcgt gtcgtgtacc agccttcggg cttacggcgt agccgctgac cttgaagccg
     2581 aactaggggt cgcggtcata tccagcaacc tggcttttgg gtggcaccta ctacgcctgg
     2641 cgggaatcaa cgacgatctg tcgggtctag ggagactgtt ctctcgggag ttggaaaggt
     2701 gacggagata gcgctccctg agcggggatt tcctgaatcg gagttcatgg ccagggccgc
     2761 ccgcgcgcag gcgatgatgg ccgagcgagg cctcgacgcc ctactggtgt gcaccgagcc
     2821 ggaagtccgg tacctaacag ggtttcatac gccgttctgg cagagcccaa cccggccgtg
     2881 gttcgtgatt ctgcctgccg aggggcgacc agttgctgtg atcccgggaa tcg
//
LOCUS       DASCMR010000037         1529 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000183433, whole genome shotgun sequence.
ACCESSION   DASCMR010000037 DASCMR010000000
VERSION     DASCMR010000037.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1529)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1529)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1529
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000183433"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..270
                     /locus_tag="QGG16_00760"
     CDS             <1..270
                     /locus_tag="QGG16_00760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HJP23838.1"
                     /translation="GTAGMLVGSGPAGRLDAAKAGGTTENRLDTRQFPDVSSIWHYGY
                     VFAPALTLGGGTFAVQRNIIAERVLGLPREIDLERGLSWSETRRS"
     gene            283..1320
                     /locus_tag="QGG16_00765"
     CDS             283..1320
                     /locus_tag="QGG16_00765"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012231504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HJP23839.1"
                     /translation="MTRAGDLTTPALLADAGVLEANTATMSAARPGLALRPHVKAFKC
                     TALAARLAAADHVSFCCATVREMEGMADADLGEDLLLANEIVDPQLAGRLGALVVAGT
                     RVTVAVDSSETIDVAATAGIREVLVDVDVGMPRCGCDPADAGRLADEARNAGLTVRGV
                     MGYEGHLQHVVNADERRSRTARAMDVLTAAHAEVGGDVVSGGGTGTWDCNEVVTELQA
                     GSFVLMDGDYAQLGLPFAEGLVVLTTAVSVRPGRHVALDGGLKALAMDSGGPQLVDDQ
                     GGAAEVLFCSDEHTTVAGGSWTVGDRVGLRPAHIDPTIAKHATLHLVHDVTAGGDAEV
                     LESWPVDLRDW"
     gene            1325..>1529
                     /locus_tag="QGG16_00770"
     CDS             1325..>1529
                     /locus_tag="QGG16_00770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23840.1"
                     /translation="MNTSKAGGGIRPDGSWRNWAGNQRSYPARIERPTTEAEVVDLVR
                     RAVADDLRVRVVGAGHSFTAVART"
BASE COUNT          228 a          482 c          568 g          251 t
ORIGIN      
        1 ggcacagcgg gaatgctggt gggatccggg ccggcgggcc gcctcgacgc ggcgaaggcc
       61 gggggaacga cagagaatcg cttggatacc cgacagtttc cggacgtgtc gtcgatctgg
      121 cactacgggt acgtattcgc cccggcgctc accttgggag ggggaacgtt cgccgtgcag
      181 cgcaacatca tcgccgagcg tgtgctcgga ctgccccggg aaatcgacct ggagcgcggg
      241 ttgtcgtggt ccgagacccg ccgcagctga ggtggtgctg cgatgacgcg tgccggtgac
      301 ctgacgactc cggcgttgct ggccgacgct ggcgtgctgg aggcaaacac ggccaccatg
      361 tcggcggctc gaccggggct cgcactgcgc ccccacgtca aggcgttcaa gtgcacggcg
      421 ttggccgccc gactagccgc cgccgaccat gtgagcttct gctgcgccac ggtccgcgag
      481 atggaaggca tggccgacgc tgacctgggc gaggacctgc tgttggccaa cgagatcgtc
      541 gatccccagc tcgcgggtcg tctcggtgcg ttggtcgtcg ctggaacccg ggtgacggtg
      601 gccgtggatt cgtccgagac gatcgatgtg gcggccaccg cgggaatccg tgaagtactg
      661 gttgacgtcg acgtggggat gccccgatgc ggttgcgacc cggccgatgc cggtcgactg
      721 gccgacgagg cccggaacgc cggcctgacc gtgcgtggcg tcatgggcta cgaaggtcat
      781 ctccagcacg tggtcaacgc tgacgagcgc cggtcccgga cggcccgggc tatggacgtt
      841 ctgaccgccg cccatgccga ggtgggcggc gacgtggtgt ccggtggggg caccggcacg
      901 tgggactgca acgaggtggt gaccgagttg caggccggtt cgttcgtcct gatggacggc
      961 gactacgccc agcttggcct tccatttgcc gagggcctgg tcgtgctcac cacagctgtc
     1021 tcggtgcgac ccggtcggca tgtggcactc gacggtggcc tcaaggcgct agccatggac
     1081 agcggtggac cccaactagt cgatgaccag ggtggcgctg ctgaggtcct gttctgctcc
     1141 gacgaacaca ccacggtggc tggtggatcg tggaccgttg gcgatcgggt ggggctacga
     1201 ccagctcaca tcgatccaac catcgccaag cacgccacgc ttcacctggt gcatgacgtc
     1261 acggcgggcg gtgacgccga ggtgctggag tcgtggccgg tcgacctgcg ggactggtga
     1321 gccggtgaac acttcgaagg ctggcggggg tattcggccc gacggttctt ggcgcaactg
     1381 ggccggcaac cagcgcagct acccagcccg gatcgagcgg cccaccaccg aggccgaggt
     1441 ggtcgacctg gtgcggcggg ccgtcgccga cgacctacgg gtccgggtgg tgggggccgg
     1501 gcactcgttc actgcggtgg cccgcaccg
//
LOCUS       DASCMR010000038         2440 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000188671, whole genome shotgun sequence.
ACCESSION   DASCMR010000038 DASCMR010000000
VERSION     DASCMR010000038.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2440)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2440)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2440
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000188671"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..240)
                     /locus_tag="QGG16_00775"
     CDS             complement(<1..240)
                     /locus_tag="QGG16_00775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23841.1"
                     /translation="MADPGVAASAEATSDQSALMVRLPVLHSSSAITFGFLGCGPFPG
                     AWAALNSQCSYFVRGLPHAVFVGGPETPDLGSFDLG"
     gene            599..1621
                     /locus_tag="QGG16_00780"
     CDS             599..1621
                     /locus_tag="QGG16_00780"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF012630.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031012 - extracellular matrix [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="matrixin family metalloprotease"
                     /protein_id="HJP23842.1"
                     /translation="MDITAKESQGTAPARKVRPFWLVVSALLAAASVYSCQGVAVGDT
                     EKPQLSAGRRGPDFVIDDYYYDGDERPWEAIDAPSEPLVRPDSDLSTYLSDSVTGNYD
                     PFGSVNPMDPSLPLWTNCTEIQVTVHYDYRLSWLSRPVMDSESRNATASLRTLTGLNL
                     VDPVDGALSVFDEAPAPTPNQIDIIWINDDEVAFADHDPDVVAYTNLRFWKSESQAST
                     ISKAQVFLPASILRSRPVPVNTPTATRGLNTRTAVLHELGHAVGLGHAAAQADSIMAP
                     THNDRTSISTPDRAAFRHAGSRPCQNTDGPEATAVAALTNPGTDLHTAVEYLATTKGT
                     EGHHHD"
     gene            1614..>2440
                     /locus_tag="QGG16_00785"
     CDS             1614..>2440
                     /locus_tag="QGG16_00785"
                     /inference="COORDINATES: protein motif:HMM:NF020650.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJP23843.1"
                     /translation="MTERPRPRPRVVRQQIARFAFLLSAILGFFAAGGAISIAGGSVG
                     AGNKATAPVAASAADECDTYDELTLQLQWVTQAQFAGYFAARDQGFYAERCLEVRIND
                     TFFGTKPVDALVADQNGQVLADVAVSWAPKAIAARLKGIPVINVAQIFQESGNIQVSF
                     KSSGIETVTDLVGTRVGTWGDGNDLELLAGLRRHGLDPTTDIELVAQSFDVGPLLSGE
                     IDSMQATTGNEYAQLLSAVHPDTGERIQPSDLNVIYWADEEVGMLADGLWVDERRFM"
BASE COUNT          458 a          849 c          714 g          419 t
ORIGIN      
        1 gccgagatcg aaggagccga gatctggcgt ctcagggcct ccaacgaaca cggcatgggg
       61 aagccctcgg acgaagtagg agcattggga gttgagggcg gcccaggccc cggggaaggg
      121 cccacagccg aggaacccga aagtgatggc gctggaactg tgtaagacag gcaggcgcac
      181 catgagggcg ctctggtcgc tggtggcttc ggcactggcg gcaacgccag gatccgccat
      241 gggccaaccc cgttagaaac gaggttggcg atccggtggg ttcgcacgcg gccttgcctg
      301 atctcggccc ggtggccatc agtagcggtt cgtcgcggtt gactacggcc tctccctgtt
      361 gcccgttggg cccctcaaac agatgaggtg cgttttctgt gctcacgcca tgaaaatccc
      421 ggcttcactg cgcctcgcac tacttccacg ggaaagcccg ctttctgagg gtttccatgt
      481 gttctgtccc tgaccccccc atatgggggg ggtcagaaac ccctatttgg gtgggggcgc
      541 cgttttcgga ggtccaacaa actctccaca cgcaacaaaa cggcttcagg agcaccagat
      601 ggacatcaca gcgaaggaat cccaggggac cgctcctgcc agaaaggtca ggcccttctg
      661 gctggtggtc agcgcgcttc tagctgctgc atccgtctat tcatgtcagg gcgtagcagt
      721 cggagatacc gagaagccgc agttgtcggc tggccgcagg ggccctgact tcgtcatcga
      781 cgactactac tacgacggcg acgagcggcc gtgggaggcc attgacgcac cgtccgagcc
      841 cctggtccgg ccggactccg acctctcgac ctacctcagt gactccgtca ccgggaacta
      901 cgaccccttc gggtcggtca accccatgga tccttcgcta cctctctgga ccaactgcac
      961 tgagatccag gtaacggtcc actacgacta ccgactgtcg tggctctcgc ggcccgtcat
     1021 ggattccgag tcccgcaacg ccaccgcatc cctgcgcacg ctcaccggcc tgaacctggt
     1081 cgaccccgtc gacggggcgc tgtcggtctt cgacgaagcg ccggcgccga cgccgaacca
     1141 gatcgacatc atctggatca acgacgacga ggtggccttc gccgaccacg accccgatgt
     1201 ggttgcctac accaacctcc gcttctggaa gtcggagtca caggcgtcga ccatctccaa
     1261 ggcccaggtg ttcctgccgg ccagcatcct ccggtcgcgt ccggttcccg tgaacacgcc
     1321 taccgccacc cgtggtttga acacacgtac cgctgtgctc cacgagctcg gccacgccgt
     1381 aggcctgggg cacgctgccg cacaggccga ttccatcatg gctccgaccc acaacgacag
     1441 gacctccatc tccactcccg accgtgcggc gttccgccat gcgggcagcc ggccctgcca
     1501 gaacactgac ggaccagagg ccacagctgt tgctgcccta accaacccag gtacagacct
     1561 ccataccgct gtcgagtacc tcgccaccac caagggcacc gaaggccacc accatgactg
     1621 agcgtccacg tccccgccct cgagtcgtcc ggcagcaaat cgctcggttc gcgttcctcc
     1681 tctcggcaat cctcgggttc ttcgctgccg gtggcgccat ctccattgcc ggtggctctg
     1741 tcggggccgg caacaaagcc actgccccag tcgccgcatc ggccgccgac gagtgcgaca
     1801 cctacgacga gctcacactt caacttcagt gggtgaccca ggcccagttc gccgggtact
     1861 tcgctgcccg cgaccagggc ttttacgccg agcgatgcct cgaagtccgg atcaacgaca
     1921 ccttcttcgg aacgaagccg gtcgacgccc tcgtcgcaga ccagaacggt caggtgctcg
     1981 ccgacgtggc cgtttcgtgg gcacccaagg cgatcgcagc ccgactcaaa ggcattccgg
     2041 tcatcaacgt ggcccagatc ttccaggaga gcggaaacat ccaggtctcc ttcaagtcaa
     2101 gcggcatcga gaccgtcacc gacctggtcg ggacccgtgt aggcacctgg ggtgacggca
     2161 acgacctgga actcctggcc ggcctccgac ggcacgggct ggaccccacc acagacatcg
     2221 aactcgtcgc ccagagcttc gacgttggtc cgctcctgag tggcgaaatc gattcgatgc
     2281 aggccaccac aggcaacgag tacgcccagt tgctctcagc ggtccatcct gacaccggcg
     2341 agcggatcca accgtcggac ctcaacgtca tctactgggc cgacgaagag gtcggcatgc
     2401 tcgccgacgg cctgtgggtg gacgaacgtc ggttcatgga
//
LOCUS       DASCMR010000039         2370 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000189050, whole genome shotgun sequence.
ACCESSION   DASCMR010000039 DASCMR010000000
VERSION     DASCMR010000039.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2370)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2370)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2370
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000189050"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2370)
                     /locus_tag="QGG16_00790"
     CDS             complement(<1..>2370)
                     /locus_tag="QGG16_00790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23844.1"
                     /translation="AGMNCVGIPTCIPDTFGSVYGYVWVDWEASGDRTAVEDGVEEHV
                     SGVKATLVNTTTYHDSDGNPCYGPGEFQMETITGAGPNSGSDSGDFGWYLADIPVFDS
                     FGNEMHYEVHFDYVDAVFPDGFTPTGYTKQLHDDVVDDETDSDVRPVKQSNGSETQAI
                     SGEFTLVADQIVHRPDAGVVGELVFDPEAKVEIDCATERALVELDNSVSTADAAYNVD
                     VYHGDVTDENRISEQSGIQVVSAGDIAYYATAIPPPVGQVLTVVVTATASQDGLDLGY
                     EPKIVWDQSGVDCPAGFAVQVQVETDCSAGGTQITLGTPGSDLGAQFTLTLVVDGVGN
                     VFEYDLDADDNHSVTLPVDEDAEWHLEWVAIDDSDLDRTFAGTSTQRVFDCESPAFAP
                     EILTGHACTASGGVVTVLVDNRASDLDATVEIRLGSELVWGPAVVNAGAISNVVSVPA
                     VDLETLRVWASPITSDTAISVMAEETVNCPTFDPDALVTVDCGVDRALLVLDNSTSTV
                     DAWFTVDVHRGGVDWASRVEDESGAQLVPAGTTATYSQGLPLVSGEMLSVEIRADAYR
                     EGVSLGFDPVVVWNQSVTDCPNGFAIQIYVVADCAADGAKAVFSTVGSEAAVVATANT
                     VVDGNVVGVNTYELSAGDTVDVLLPVPAGSDWSLQWSVAAASDPSRVFQGATTTQTLD
                     CEPEEPTPTVPPTTTTTVVEDSVRSPLVDPTDQDERCCGQDDPCDQCCWPLWWFLLVV
                     LAVLLGLLALIGFLAFAVVSLSRHGGGCRGPDDRDPGGSSGRDRDEGVPG"
BASE COUNT          458 a          744 c          743 g          425 t
ORIGIN      
        1 ccgggcacac cttcatcacg gtcacgccct gagctaccac cgggatctcg gtcgtcgggc
       61 ccgcggcaac caccgccgtg gcggctgagg gagacgacag cgaatgcgag gaaaccgatg
      121 agggccagca agccaagcag gacagccagg acaacgagca ggaaccacca cagcggccag
      181 cagcactggt cgcatggatc gtcttggcca cagcagcgct catcttgatc agtcgggtca
      241 acgaggggtg agcgaaccga gtcctctacg accgttgtgg tagttgtcgg aggcaccgtg
      301 ggtgttggtt cctcgggttc gcagtcgaga gtctgtgtcg tcgtcgcccc ctggaagacc
      361 cggctcgggt ccgaagcggc ggcaactgac cactgcaggc tccagtcaga accggccggc
      421 accggcaaca ggacgtccac ggtgtcgccg gccgacagtt cgtaggtgtt cacccccacc
      481 acgtttccgt cgacaacggt gtttgccgta gcgaccaccg ccgcctcaga accaaccgtc
      541 gagaacacgg ccttggcccc atcggctgcg caatcggcta cgacgtagat ctggatggcg
      601 aaaccgttgg gacagtcggt caccgactgg ttccagacca ccaccgggtc gaaccccagc
      661 gacacaccct cccggtaggc gtcagcacgg atctccacgc tgagcatctc gccagatacc
      721 agcgggagac cctgggaata ggtggccgtt gtccctgcgg gcaccagttg cgcccctgat
      781 tcgtcttcaa cccgcgaagc ccagtcgacc ccgcctcgat ggacatcaac cgtgaaccag
      841 gcatcaaccg tcgacgtcga gttgtccagc accaacaggg cacgatcaac cccacaatcc
      901 accgtcacca aagcatccgg atcaaaggtc gggcagttaa ctgtctcttc agccattact
      961 gagatggccg tatccgaagt gatcggagag gcccagaccc ggagagtctc aaggtcaaca
     1021 gcggggacgc tgacaacgtt ggagattgcg cctgcgttga caactgctgg accccacacc
     1081 agctcggagc cgagacggat ttcaacggtt gcgtcgaggt cggaagcacg attgtcgaca
     1141 agcacggtga caaccccgcc ggaggctgtg caggcgtgtc cggtcaggat ttccggggcg
     1201 aatgctgggg actcgcagtc gaagacccgc tgagtgctgg ttccggcgaa tgtccggtcc
     1261 aggtcggaat cgtcgatagc gacccattcg aggtgccatt cggcgtcttc gtcgaccggg
     1321 agggtgaccg agtggttgtc gtcggcgtca aggtcgtatt caaagacatt tccgacacca
     1381 tcgacgacca gggtgagggt gaactgtgcc ccgaggtcgg atcccggagt tccgagggtt
     1441 atctgggtgc cgccggcgct gcagtctgtt tcgacctgga cctgcactgc gaagcctgcc
     1501 ggacagtcga ctccggactg gtcccagacg atcttcggtt cgtagccgag gtccaacccg
     1561 tcctggcttg cggtggctgt gacgaccacg gtgagaacct gaccgaccgg cggcggaata
     1621 gccgtggcgt agtaagcgat gtcgcccgcg gagacgacct ggatgccgga ctgttcactg
     1681 atccggttct cgtccgtaac gtcgccgtgg tagacgtcga cgttgtaggc cgcatcagct
     1741 gttgagacgc tgttgtccaa ctccacgagg gcccgttccg tggcgcagtc gatttcgacc
     1801 ttcgcttccg ggtcgaagac caactcgccc accacgccag cgtcgggacg gtggacgatc
     1861 tggtcggcaa caagcgtgaa ctcgccggag atggcttggg tctccgagcc gttggattgc
     1921 ttgaccggac ggacatccga atcggtctcg tcatcaacga catcgtcgtg gagctgtttt
     1981 gtgtaaccgg tcggggtgaa cccgtccggg aacacggcat cgacgtagtc gaagtgcacc
     2041 tcgtagtgca tctcgttacc gaagctgtca aagaccggga tgtcggcgag gtaccagccg
     2101 aagtcaccgc tgtctgagcc cgaattcggg ccggcaccgg taatcgtctc catctggaac
     2161 tctcccggcc catagcaggg attgccgtcc gagtcgtggt aggtcgtggt gttgaccagt
     2221 gtggccttta ccccggagac gtgttcctct acgccgtcct cgaccgcggt gcggtctccg
     2281 gaggcctccc agtccaccca gacatacccg tagaccgacc cgaaggtgtc ggggatgcag
     2341 gtcgggatcc ccacacagtt catgccggcg
//
LOCUS       DASCMR010000040        27209 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000192590, whole genome shotgun sequence.
ACCESSION   DASCMR010000040 DASCMR010000000
VERSION     DASCMR010000040.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 27209)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27209)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27209
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000192590"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..424)
                     /locus_tag="QGG16_00795"
     CDS             complement(<1..424)
                     /locus_tag="QGG16_00795"
                     /inference="COORDINATES: protein motif:HMM:NF012703.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginase family protein"
                     /protein_id="HJP23845.1"
                     /translation="MAGEGARLTGGEKACLLHFDARTDAYHSIPHFLGAVKSAAHWAG
                     YLVEEGHVDPTHSVQVGIRGNVRSLGWTDPSYALGYEVIRKVDYDEMGPERVMEVIDE
                     RIGDRPLYITFDLDCLDPTVAPGVANIEAGIEGFGIDQV"
     gene            complement(316..828)
                     /locus_tag="QGG16_00800"
     CDS             complement(316..828)
                     /locus_tag="QGG16_00800"
                     /inference="COORDINATES: protein motif:HMM:NF012703.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginase family protein"
                     /protein_id="HJP23846.1"
                     /translation="MERTDQDRMMEGLYWHGIPTLFRCEHDPDPANADIGLIGVPHST
                     GNGTTQRDQHLGPRAVRDISALGRRVHDAFGLDPWEASRIHDLGDVPLPRANDNEACI
                     EAITDFYREVGEAGCRPVSIGGDHSIPVGFSRASPAKGLALPAARKPVCCTSTPALTP
                     ITPFRTSSER"
     gene            complement(886..1458)
                     /locus_tag="QGG16_00805"
     CDS             complement(886..1458)
                     /locus_tag="QGG16_00805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HJP23847.1"
                     /translation="MTDLIDPGPRASFTDMSTSTKEDWMVIMEQRAELEQGLPDRIIE
                     QFEHLRNDYGGFPVDRLEHSIQTATRAERDGRDDEYVLCALLHDIGDPLTPYNHPDVA
                     AAILKPFVSEANHWMVENHGIFQGYYFWHHLGMDRDTRDKFDGHEHFDHCATFCSEYD
                     APAFDPSYDSNPFEYYLPLIRDVFSRNPRR"
     gene            complement(1588..2802)
                     /locus_tag="QGG16_00810"
     CDS             complement(1588..2802)
                     /locus_tag="QGG16_00810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RimK family alpha-L-glutamate ligase"
                     /protein_id="HJP23848.1"
                     /translation="MKLAILSRQPDSYSTMRLHLAALDRGHEVDVLDTLRFAIDLAGD
                     GPDMAHRSQPIEDYDAIIPRIGASITYFGTAVVRQFEQMDIYTPNTANGIANSRDKLR
                     AIQIMSRHEIGMPATAFARNRDDVLPAIERVGGAPVVIKLLEGTQGIGVILAPDTRVA
                     SAIIETLQSAKQNVLIQAFVEESRGRDVRALVVGDRVVGAMRRTAAGDEFRSNVHRGG
                     TVEAVELDEEYETTAVRAAQIMGLRVAGVDMLEGVDGPLVMEVNSSPGLEGIESATGL
                     DIAGAVIDYIDDQVAFPELDVRQRLTVSTGYGVAELLVREDGTFVGQTIEESGLLERD
                     ISVLTLHRGAQVIPNPRRQRELEANDRLLCFGRLDEMRDMIPERRKRRTRVRPLPEDL
                     ASGRPIDDEAEA"
     gene            2896..3471
                     /locus_tag="QGG16_00815"
     CDS             2896..3471
                     /locus_tag="QGG16_00815"
                     /inference="COORDINATES: protein motif:HMM:NF017434.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RimK/LysX family protein"
                     /protein_id="HJP23849.1"
                     /translation="MPENKRKRSPNKPPPALGWREWVGLPEHGLEWVKAKVDTGARTS
                     SLHAAGLHTFEVENREWVRFSIYPWQRSTTDAIQIEARVLDRRRVRSSSGTTERRPVV
                     VLPVRMGNKIYDVEFTLTRRDEMGFRMLLGRQALRGRFLIDTGRSYLLGQPPRTERRA
                     NRTPSSETNPKPDRNPEVFPGPKSDQTPTNG"
     gene            3464..4417
                     /locus_tag="QGG16_00820"
     CDS             3464..4417
                     /locus_tag="QGG16_00820"
                     /inference="COORDINATES: protein motif:HMM:NF016817.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinylglutamate desuccinylase/aspartoacylase
                     family protein"
                     /protein_id="HJP23850.1"
                     /translation="MAEHGSIIIGGHEVRQGTTDHFELPIGRLVTGTDMALPVRVVHG
                     AKPGPTAWLNAAIHGDEVGGVEVITRVLRDLDPMAMRGTVLAVPVVNVWGFMGGDRFL
                     PDRRDLNRSFPGSPSGSLAAQIAHLFMTEVVGRSVVGIDLHTASDHRSNLPQIRADLD
                     DPETRRLAEAFSAPVMVHARNRAGTLRQAATRRGATVLLYEAGEALRFDETAIATGVD
                     GVRRVLAAIEMIDGPTAAEDPSAESRAAGWVRAGRSGILHLSVDLGDRVEHRQVLGTI
                     DDAFGNAVAAVRASRGGMVIGVTRSPLVNRGDAVAHLAEIT"
     gene            4484..4554
                     /locus_tag="QGG16_00825"
     tRNA            4484..4554
                     /locus_tag="QGG16_00825"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4516..4518,aa:Gly,seq:ccc)
     gene            complement(4572..6053)
                     /locus_tag="QGG16_00830"
     CDS             complement(4572..6053)
                     /locus_tag="QGG16_00830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavin oxidoreductase"
                     /protein_id="HJP23851.1"
                     /translation="MSTRDRITQVRRLADVAAVRDRLAELDLETGTDLCLDDDLEVGP
                     DAPLARPWTVALAGSTARTVGNRFAVLPMEGWDGTTDGRPTDLVARRWERFGAGGAKL
                     VWGGEAVAVRVDGRANPNQLCIGPSSVDDLGGLRSRLVAAHAGRHGPTNDLVVGLQLT
                     HSGRWSRPDGSPVPRIAYRHPVLDGWVPLDESSVLSDGELDDLMGDFVVAAEVAAEAG
                     FDFVDVKACHGYLLHELLSGVDRDGSYGGALEDRARFQLGTLAAIRAAVPDLGLGVRL
                     SLYDLAPHEAGPDGVGRPAVEAPYRFAFGGDGTGTGLDLSEPDRLLGMLADAGVSMVC
                     ATAGSPYHCPHAQRPAYFPPSDGYLPPADPLVEVARLIGATAALRARHPELAFVGSGY
                     SYLQEWLAHVAQAEVRAGRVDAVGLGRMVLSYPDLPSDVLAGRPLDRRRLCRTFSDCT
                     TAPRNGLVSGCFPLDEHYKAMEARVELTRVKREAEVARGGRRR"
     gene            complement(6061..6996)
                     /locus_tag="QGG16_00835"
     CDS             complement(6061..6996)
                     /locus_tag="QGG16_00835"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HJP23852.1"
                     /translation="MPGAPPVRPGRTITGMSAILLPHHDDGSVDFDGLAAHVARTAEA
                     GLTPAVNMDTGFVQLLDAVTKCRVLDVAAAHCDDFVAGAHLDDRPGDPFDLDGYRREV
                     ERIEAAGGTPIVFPTHGLISRDGDGWVGAHASIAEQCDRFLAFELGPMFVPYGRIYDL
                     DAYRGLLEVGACVGAKHSSLDRGLEWERLAVRDEVRPDFLVLTGNDLAIDMVMYGSDY
                     LLGLSTFAPDAFAERDRRWATGDPTFHELNDLLQYLGFFTFRDPVPGYRHDAALFLEL
                     RGWIGSSRIPDGAPRRPGSDMEILGDIARRLEATL"
     gene            complement(6996..8912)
                     /locus_tag="QGG16_00840"
     CDS             complement(6996..8912)
                     /locus_tag="QGG16_00840"
                     /inference="COORDINATES: protein motif:HMM:NF021534.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2264 domain-containing protein"
                     /protein_id="HJP23853.1"
                     /translation="MADPRANPLAGNPFATKADAQRAVRDLVKPVVRHLSPGGARARL
                     GSGAALFERRVAELEGWARPLYGIVPLTVGGGHFDYWDRWRDGLVAGTDPDGDEYWGP
                     CAGDNDQRMVEMAAVGFALAFTPGQLWEPLDDPARQRVLAWLDGIDEFEPAPNNWQYF
                     RLLVHMGRERVGAAGEAGAGQRSVERIEDYHVADGWSRDGTLGNVDWYLPFAFHTYGL
                     ILHASGLGDREAADRYVERARLFGPEFSHWFGPDGAGIAYGRSMTYRFAQSSLWGAYA
                     LADVEAVPWAEARGHWGRHLRWWAGRPISDRDGVLSVGYGYDNRRLAEAYNSPGSPYW
                     AMKAFAGLAAPDDHPFWAGPEARPGPTDGPVAQTVAGRIVDRDDVHAVALSGGRTTSL
                     RFIEQVEAKYEKLAYSSRYGFTGEVEFGWGASETDSTIVLVDGDDRRSRSRIEDVEVV
                     EAETGPMLWSRWRPWPDVVVDTVLVGGAAHHHRVHLIRTGRAVRVVETGFAVGVDSLR
                     LVGGESEVRTSTADGSALLATVRDVTGLVDHPAAGSGPRKASVRPQPPNASMVDPSSA
                     VPVLSCALEPGEHVLACTAWAAPTGAGPEPGQLPPPPVEAVALLERFRDRESEPHEGA
                     DIESLIRLPTRETD"
     gene            complement(8905..9702)
                     /locus_tag="QGG16_00845"
     CDS             complement(8905..9702)
                     /locus_tag="QGG16_00845"
                     /inference="COORDINATES: protein motif:HMM:NF013429.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HJP23854.1"
                     /translation="MIRPGLCSITFRQLEVDEVVDLAAAGGLAGVEWGSDVHVPVGDE
                     AEAARVADRCREANLTSPSYGSYVQAGQTPRDEVERVADTALALGVANVRIWTPYGTG
                     PDAPADERAAVVAGVAEAAAVVDARGLTTSLEYHVGTLTETAASALAVLAEVDHPGLF
                     TYWQPLVSLDDAEAVAELVRVAGRLSHLHVYQWGTGFTDRYPLADGASLWEPALAAVP
                     DDGPWTDAGRDRWAFLEYVRDDDPGQLADDATTLRTWLDAGRGDDGG"
     gene            complement(9710..10723)
                     /locus_tag="QGG16_00850"
     CDS             complement(9710..10723)
                     /locus_tag="QGG16_00850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacid dehydrogenase"
                     /protein_id="HJP23855.1"
                     /translation="MSTVPSRPRAALLMAPGLEALVFESDVRDRLDAVVDRVVPGAVA
                     TPGELPAAVEVLVTGWGCPRLDAGVLDVLPDLRLVAHAAGTVRPLVTDALWERGVVVT
                     SAAAANAVPVAEFTFAVVVLALKDAFAVRDRHRAVRGREAVVDHARMGTRGRTIGVVG
                     ASSVGRLVIERLRTLDVDVLVADPYLDGDPYLSEIESYGARRVGLDELLAVSDVVTLH
                     APLLEATRHMIGAAQLARMSDGAWLVNTARGGLVDTDALTAEVVSGRLRAVVDTSDPE
                     PLPADSPLYDHEGAVLTPHIAGSLGSEVGRMGDLAVTEVERFVAGEPPIHPVVRADLD
                     RIA"
     gene            10800..12863
                     /gene="paaZ"
                     /locus_tag="QGG16_00855"
     CDS             10800..12863
                     /gene="paaZ"
                     /locus_tag="QGG16_00855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012784184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetic acid degradation bifunctional
                     protein PaaZ"
                     /protein_id="HJP23856.1"
                     /translation="MATMRALESHVCGSWHTPVADGTMTYHAVTGAPVASVSSAGIDF
                     SASTAYARDVGGPTLRSMTFHERAALLKAAGQLLLAEKESLYALSTATGATRADSWID
                     IEGGAGVLLGYASKGRRELPDGTVLLDGDPEVLARDGSFLAAHVATSRLGVAVQVNAF
                     NFPIWGALEKLATAWLAGVPAIIKPATPTAFLTEAMVRLIVDNGLVPDGALQLVCGSV
                     SGLLDHLDGQDHVAFTGSADTAAVLRAHPRLVARSVRFNAEADSLNAAILGTAAIPGT
                     TEFDLFTSEVVREITVKAGQKCTAIRRALVPTAQLDTVADALATALADVRVGDPADES
                     TQMGALVGTTQREEVRDAVMSLRSSTDVVIDTCTFHDVDPSVGAFLAPTVLRATDPTA
                     RSIHATEAFGPVCTLIGYDGPDDAIRLAALGAGSLVASVVTSDVAEAAALTLGIAAHH
                     GRVHVLDASTATTSTGHGSPLPTLVHGGPGRAGGGEEMGGLRGIRHHMQTTAIQGSPD
                     VLTAVTGQWMPGATRHVDRGHPFKLHFDDLELGTAIRTDSRTVTLEDIEGFAHSTGDH
                     FYAHMDEKAAAASPIFGGRVAHGYLVLSLAAGLFVWPDPGPVLANYGIDRCRFAKPTY
                     PGDTLTVWLTAKRKTLRTGAGYGEVAWDAQVVNQADEVVAAYDVLTMVANRPGVNGAA
                     ESEPA"
     gene            12863..13798
                     /gene="paaA"
                     /locus_tag="QGG16_00860"
     CDS             12863..13798
                     /gene="paaA"
                     /locus_tag="QGG16_00860"
                     /inference="COORDINATES: protein motif:HMM:TIGR02156.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaA"
                     /protein_id="HJP23857.1"
                     /translation="MGRTWASMDEFEAFLDDGGIVEVDDEIPDGYRQAVFAFIEMHAN
                     SELMGGLTERDWIPRTPGLRHKMAVLAKTQDEIGHGHLLYMVAADMGLKTRREMLEDL
                     FAGRSKFHNVFHYRAATWGDQVAISFLVDAAALASQQAVFKNCSYGPYRRILKRIISE
                     EGFHMRMGEERMMLIAEGTDFQRAMFQQSLDNWWWPALQLFGPDSKPDDVLLRWHIKS
                     ERNEVLRARWVQKFAPLLVSYGFTIPDPGLVHDPEADTWTAGPIDWGPLKRTLAMAGP
                     DSARRIGEAAANWANTNWVRDGLDAASEQATGVQA"
     gene            13795..14265
                     /gene="paaD"
                     /locus_tag="QGG16_00865"
     CDS             13795..14265
                     /gene="paaD"
                     /locus_tag="QGG16_00865"
                     /inference="COORDINATES: protein motif:HMM:TIGR02159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaD"
                     /protein_id="HJP23858.1"
                     /translation="MTAIPSVEDVRVAVATVDDPEYPGISIVDLGLLESVDVRPDGDV
                     VVGLVPTFSGCPALAMIADDVRAAVAAIDGVTGSRVDVRWLTGPAWTVERLTGTARRT
                     MAEEFTVAVRIGPGPVPCPRCGNDTAEESMFGPSRCRAVHVCRSCTEVVEVMRA"
     gene            14280..14576
                     /locus_tag="QGG16_00870"
     CDS             14280..14576
                     /locus_tag="QGG16_00870"
                     /inference="COORDINATES: protein motif:HMM:NF018002.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23859.1"
                     /translation="MKRYEVFLKKDGRDEYRHAGSLDAPNDELALVLARETYLRRAEG
                     DRMWLVDRAHLVVGDTDFVAPNADKPHRHNDGERISERRKRLREDQEPTGEDAS"
     gene            14573..15361
                     /gene="paaC"
                     /locus_tag="QGG16_00875"
     CDS             14573..15361
                     /gene="paaC"
                     /locus_tag="QGG16_00875"
                     /EC_number="1.14.13.149"
                     /inference="COORDINATES: protein motif:HMM:NF016993.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010124 - phenylacetate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-phenylacetyl-CoA epoxidase subunit PaaC"
                     /protein_id="HJP23860.1"
                     /translation="MTDPWNVDIREFVLAFADDEHLMGQQHTEWIGVAPFLEEDLAFS
                     SIGQDELGHAATLYAIVAGDGDPDREAGIDDRQLDALAFDSDPSRWRSAHLTEIRTDE
                     WAHALVRHWLYDTAEQLRWELVAESTLEALASAAARAEREEWFHRRHADGLLDTLLPV
                     SDAGDRLKAALVDLLPLAVGLFDPVAGEVEAVASGVTAAPFDSRMPEWADRVRARFDV
                     DLPATGLSPSDRLAPTGRTNRCDAFGPLLSRMREVLDLDPAAIW"
     gene            15402..16439
                     /locus_tag="QGG16_00880"
     CDS             15402..16439
                     /locus_tag="QGG16_00880"
                     /inference="COORDINATES: protein motif:HMM:NF017365.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline racemase family protein"
                     /protein_id="HJP23861.1"
                     /translation="MVLAPDEVIVADDYHTAGEPFRIVDLGPMEGTTVLDRRSWATAN
                     LDDHRRFLIHEPRGHADMYGGMVVPPDGPSAGGNRAGDLGVVFFHKDGFSTACGHGTI
                     AMATWAIDTGRIEAPSDGEIPVVVDVPSGRLHTVARMEAGRVASVRFTNVESFVTARD
                     LTVQTDLGPVTAHVSFGGAFYASVAIDDLPVSCRPADVDRLIVLGRAVKAELADHPST
                     VHPSDDRLSGLYGTILHETIGLQEAASSDSGPVHQRNVTIFADGQVDRSPCGSGTCAR
                     LALLHDSGDLEIGATFLNEGVAGGVFDARIEAATGGGIIPSVEGSAHRHATTTFHLDP
                     HDPVGLGFLFR"
     gene            16464..17435
                     /locus_tag="QGG16_00885"
     CDS             16464..17435
                     /locus_tag="QGG16_00885"
                     /inference="COORDINATES: protein motif:HMM:NF014476.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine cyclodeaminase family protein"
                     /protein_id="HJP23862.1"
                     /translation="MTGLPHFDAEAIRAVVDMPTCIAALSDGSRELGDLHPRAQVPLG
                     PGDDFLMMPAVSPAGIGVKIVNVVSGNRDRGLPLIHGFYLYCDRETGVPAATLDGSAL
                     TTLRTPAASALAADLLARQDVTTLGVFGTGIQARGHIEAMLVVRPGIDRIVVSGRTNA
                     SAVGFVADPTVQALAGDRELVAGTPEETAGCALVCGCTSSTEPVIPTTAVRPGAHLGL
                     VGSYSMARREVDAELLARATVFVDDRHAAAHEAGDLMVPAEAGDWSFDAVAGDLAELC
                     LGTAGRRDDDEITLFKSVGLAVWDLIVAGAVVHADWTHRPNGRQSNL"
     gene            17468..18802
                     /locus_tag="QGG16_00890"
     CDS             17468..18802
                     /locus_tag="QGG16_00890"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate--CoA ligase"
                     /protein_id="HJP23863.1"
                     /translation="MPLPFDPVDTVGLPAEQKRSLQGERLSALVNRLATGDNTFWSER
                     LADIDPASITSVDDLPRLPFTVKQDLRDQYPLGMVTIPVEATTRLHASSGTSGKPTIV
                     VYTPADLAIWAEVNARALALAGTRSDDILHNGYGYGLFTGGLGLHYGGERLGCTVVPV
                     SGGNTALQLQLLEDLGSRVLSATPSFCLVLAERAHALGIRDQLGVEIGILGAEPWSEG
                     MRERIHEAWGGSFTALDIYGLSEIIGPGVAMEAPDDLGALNVFDDHFLPEIVDPATGQ
                     PLPDGEFGELVITTLTKEAMPMLRYRTGDITRILPNTGDTAGPGTRHWTRMARLTGRA
                     DDMLIIRGINVYPREIEAVLMDDPDVGANYAIVVDRRGSMVELRVRAEATAAASSATN
                     LVVGGERLARLIAERIRIRADVEMVPEGSMPRTEVGKVKRVFEQVDDTNPLE"
     gene            18894..20126
                     /locus_tag="QGG16_00895"
     CDS             18894..20126
                     /locus_tag="QGG16_00895"
                     /inference="COORDINATES: protein motif:HMM:NF014790.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP23864.1"
                     /translation="MSDRPEDTPEQAEFRSASRSFLAQHAEPRTRIDPWQVSGFPDDA
                     EAKVYFEHGRAWQRTLADHGWAGLTWPAEFGGGGRPPWTDRILREESADYGSHPGFIG
                     ATIAMLGPTLLAHASDELKARFLPSLLSGEVAWCQLFSEPGAGSDLASLSTRAVRDGD
                     HWVVHGQKVWNSCAQFTDWGFLLVRTDPDAPKHRGITFLLVDMTSPGIEVRPLVQANG
                     SSHFNEVFLSGVRIPTDQMVGEVHGGWTPTRTVLANEAAFIGRGEGAPASDRLRDLAA
                     RHGGLDDPTVRQRLARIISRERLQSLMGQRIQSAVRDGQQPPFDPALTKLLAAGTKVL
                     TGDLAADLAGPSAIAGPITNDREGTWIRAEVLNRFAISIGGGTTEVQKNNLAERSLGL
                     PREPANDREAAWKDVLRS"
     gene            20152..22404
                     /locus_tag="QGG16_00900"
     CDS             20152..22404
                     /locus_tag="QGG16_00900"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJP23865.1"
                     /translation="MTEEHTEESMSSGETPGETGADSNAASLAASVLAEEAARHAEQE
                     TNQIMFPDELLPGVNSAGLSLKKGLAMGGGAATFVVLAILNSLDELQMAAISVLAPDI
                     RDTFGVSDGTITFIASSSGAFVVLGAIPMGWAADRFRRIPIIGWSSIIFGAMVAMSGW
                     AVNAFTFFWARFGVGIAKANTIPVHSSVIADTYPIGIRGRIGAIDKGTGRLLAVTSPI
                     LVGAIAAAANGPGEIDGWRWAYYLLGIPVAVAAIAAFFLKEPLRGRWEKEDVLDESFT
                     EDDPLPVSMDAAFSRLMQIKTIKTVVVGFSALGFGLFTAPVLENLWLEDEFGLESFER
                     GAWGTVAGLATVGALIYVGPKFDRMWRENPTRTLHLVGALIGFSAIFKPIQWAMPTVP
                     LFIGFSIPTLVMLSTAFAMVGPLMQAIVPYRLRGTGTALITLYIFFIGGTGGGLISFM
                     FADSWGPRVTTLVLTVPSALIGGWIMYRGARHIRGDLSLNVQELLDEQDEQRRAGGDG
                     EVPALQVNNLDFSYGSVQVLFDVAFEVKKGETLALLGTNGAGKSTILRVISGLGVPQR
                     GVVRLHGRTVTYSSPQLRSQLGIQQLPGGKGVFGDMTVRQNLIMGAYVHRADKADVER
                     RIADVLDLFPDLANRQGQRAGSMSGGQQQMLALARVLLHEPEVLLIDELSLGLAPTVV
                     QDLLILIERLQERGQTIVVVEQSLNVALAIADRAIFLEKGQVRFEGAASELVERDDLA
                     RAVFLGTDGG"
     gene            22406..25273
                     /locus_tag="QGG16_00905"
     CDS             22406..25273
                     /locus_tag="QGG16_00905"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJP23866.1"
                     /translation="MDVLASELVASPLVLAVWTTRQLWFDGLVNGMVFGLLALGVVLI
                     YRSTRVINLAVGNMGLPASGLMGVMVINYGFPYWAALALALLVGISVGAIVERAIIRR
                     LFDAPRVIVLVATIGVAQLMQAVLASFPDIEKVRGQRYPVPLGFKWNDVFGLRITGPK
                     LTILILVPLLALGLSWFLNRTVFGQTVQASASNADLARISGIDPKTVQLFVWTVAGLL
                     SSVSLLLLSGNRGSITGMANLGPNTMSRALVAAVIAGMVSFPRAIIAGLLIGVAQAHV
                     QFLFLEQGGLIDFILFIVVAIAVAFQSRGAAESEGSFSFSARRRPIPERLREIWWVRR
                     MSTIALGLLLAIAVVLPLLVTRPSRHLLYASIIAFAVCAMSMTIVTGWAGQLSLGQMT
                     FAGVGALMAAGFNRGLEVGIGIGDWHFFTISFPRVPYLVSMMLASLVAAAVAALIGLG
                     ALRVKGLLLAVTTFAFALAAQQYVFRRPAFNGGFTQSIPFRRGSVGPINLDSQRSYYY
                     LCLAVLILVLVVVRALRASGIGRSIIGVRENEYTAAAYTVGPSRTKLMAFALAGGIAG
                     LGGALLGGLVQNIPYTERLFQIGDSLRLVSMVVIGGLGTLMGPVIGAMWVVGLPAFWP
                     DNDLVPLFTSSIGLLILLLYFPGGLIQIAYAARDAALRLAEARLGEASTERATVPPAV
                     ISSRTTTRPVLTGPALAVTDVSVTFGGLRAVDKASMFAQPGEVVGLIGTNGAGKSTLM
                     NAIGGFAPSEGTIEILCRDASQMNSANRARLGLGRTFQAARLFPDLTVRETVQVALEA
                     RGRTGLLSTALHLPSATRAERSKRSDADDLIGFLGLGRYSDAFVADLSTGTRRIVELA
                     GLLALDAQVLCLDEPTAGIAQRETEAFGPLLKQIQQELNATLIVIEHDMPMIMALSDR
                     VYCLEAGQVIAQGTPDEVRNDPQVLASYLGTDQRAIDRSDS"
     gene            complement(25331..26443)
                     /locus_tag="QGG16_00910"
     CDS             complement(25331..26443)
                     /locus_tag="QGG16_00910"
                     /inference="COORDINATES: protein motif:HMM:NF013117.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HJP23867.1"
                     /translation="MAETETTMGLDQGLVEACGLEPGYTCEWIWDTTGNEALASLVDW
                     LIERPLKVVVILIGALIVNRLVKRAIDRMVNRLVETRTQEETVAEDSASATLSRLGRR
                     ARGKLTKIHEQAERSRQRAMTLGAVLRSLAGFSVYALAFMVALGELGLDLGPLIAGAG
                     IVGLAVGFGAQSLVADFIAGIFIIIEDQYGVGDYVDVGAASGTVERVTLRTTVLRDVH
                     GALWVVPNGEIRRVGNSSQLWARTVLDVDVAYNTDIDLAASVIKEVADSVWREELESA
                     TIIEEPEIWGVQNFGADAISIRLAVKTEPGEQWATGRLIRARLKKAFDTNGIEIPFPQ
                     RTVWVNQVSEGPAAAVETTQIRDDLLENRSGSDGEE"
     gene            complement(26520..26723)
                     /locus_tag="QGG16_00915"
     CDS             complement(26520..26723)
                     /locus_tag="QGG16_00915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23868.1"
                     /translation="MFLGENLLSWLLLALGAAMAVGNAMALIRPPAGREEGDLERAPL
                     WRSLLYIVLGTAAALWAVATLAG"
     gene            complement(26728..>27209)
                     /locus_tag="QGG16_00920"
     CDS             complement(26728..>27209)
                     /locus_tag="QGG16_00920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DnaB-like helicase C-terminal domain-containing
                     protein"
                     /protein_id="HJP23869.1"
                     /translation="HIWIDDNPNISVMEIRAKARRLKSRVGNLGVVIVDYIQLMTGRS
                     SAESRQVEVAEISRGLKILARELQCPVIGLSQLSRGLEARQDKRPMLADLRESGSIEQ
                     DADVVIFLYRDEMYNPDTADVGLSEVIVAKHRNGPTGTVRLAWLPRYTRFANMSRAG"
BASE COUNT         4478 a         9492 c         8809 g         4430 t
ORIGIN      
        1 tgacttggtc gatgccaaag ccctcgatac cggcctcgat gttggccacg ccgggagcca
       61 ccgtcggatc gaggcagtcc aggtcaaagg tgatgtagag cggtcggtcg ccaatgcgct
      121 cgtctatgac ctccatgacc cgctcggggc ccatctcgtc gtagtcaacc ttgcggatca
      181 cttcgtaacc cagtgcgtac gacgggtcag tccagcccag cgaacggacg ttgccccgga
      241 tgccgacctg aaccgagtgg gtggggtcca cgtgaccctc ctcgacgagg tagccggccc
      301 agtgggcagc cgacttcacc gctccgagga agtgcggaat ggagtgatag gcgtcagtgc
      361 gggcgtcgaa gtgcagcaga caggctttct cgccgccggt aaggcgagcc ccttcgccgg
      421 cgatgccctg gagaatccca ccggaatgga gtggtccccg ccgatcgaca ccggccggca
      481 ccctgcctcg ccaacctcgc ggtagaagtc ggtgatggcc tcgatgcagg cctcgttgtc
      541 gttggcccgg ggcaggggga cgtcacccag gtcgtggata cgggacgcct cccacgggtc
      601 gagtccgaac gcgtcgtgga cccgccggcc aagagccgag atgtcccgga cggcccgggg
      661 gccaaggtgc tggtcacgtt gggtggtgcc gttgcccgta ctgtgaggca ccccgatcaa
      721 accgatgtcg gcgttggccg ggtcgggatc gtgttcgcac cggaacagcg tggggatgcc
      781 gtgccagtac aggccctcca tcatccggtc ctggtcagtc cgctccatca cctctcctag
      841 tccttctgtc ctgctctcgt tagccgccga accggaagcg ccttctcagc ggcgggggtt
      901 cctactgaat acgtcgcgga tcagcggcag gtagtactcg aacgggttcg agtcgtagga
      961 cgggtcgaaa gccggggcgt cgtactccga acagaacgtg gcgcagtggt cgaaatgctc
     1021 gtggccgtca aacttgtcgc gggtgtcgcg gtccatgccg aggtggtgcc agaagtaata
     1081 accctggaag attccgtggt tttcgaccat ccaatggttg gcctccgaca cgaaaggctt
     1141 gaggatcgcc gcggccacgt caggatggtt gtacggggtg agcggatcac cgatgtcgtg
     1201 cagaagggcg caaagcacgt actcgtcgtc acggccatcg cgttcggccc tggtggccgt
     1261 ctggatgctg tgttcgagcc ggtccacggg gaaacccccg taatcattcc gaaggtgttc
     1321 gaactgctca atgattcggt cgggcagccc ctgttcgagt tcggcccgct gttccatgat
     1381 caccatccag tcctccttcg tggaggtgga catgtcggtg aacgaagccc gggggcccgg
     1441 atcgatcaga tcggtcatgc gaagtctcct atttcaaatg cgtcgaatgt tctgcctaga
     1501 aagtcaacca tggtcaccgc gtcggcatcg gagccggtac cggggtcacc aacaaccact
     1561 ggtgccggtg cctctcctgg aggcggttca tgcctcggct tcgtcgtcga taggtcgccc
     1621 cgaagccaaa tcctcgggca acggccggac tcgggtccgc cgcttgcgac gctcgggaat
     1681 catgtcgcgc atctcgtcga ggcggccgaa gcaaagcagg cggtcgttgg cctcgagttc
     1741 ccgctggcga cggggattgg ggatgacctg ggcgccgcga tgcagggtca gtaccgatat
     1801 gtcgcgttcc agtaggccgg actcctcgat ggtttggccg acgaacgtgc cgtcctcacg
     1861 aaccaggagc tcggccacgc cgtaacccgt gctaaccgtg aggcgttggc gaacgtccaa
     1921 ctcggggaag gccacttggt catcgatgta gtcgatgacc gcgccggcaa tgtccagtcc
     1981 ggtggccgat tcgatgccct ccagaccagg cgacgagttg acctccatga ccagcgggcc
     2041 gtcgactccc tccagcatgt ccaccccagc cacccgtagg cccatgatct gggcggcccg
     2101 caccgcggtg gtctcatact cctcgtccag ttcaacggcc tcgacggtgc cgccacggtg
     2161 cacgttggag cgaaactcgt ctcccgccgc ggtacgtctc atggcaccaa ccacccggtc
     2221 accgaccacc agcgcccgga catcacggcc tcgagattcc tccacaaagg cctggatgag
     2281 cacattctgc ttagcgctct ggagggtctc gatgatggcc gaggccaccc gggtgtcggg
     2341 ggccaagatc accccgatgc cctgagttcc ctccagcaac ttgatgacca ccggggcgcc
     2401 acctacccgt tcgatggccg gtagcacgtc gtcgcggttg cgggcaaagg cggtagccgg
     2461 catcccaatc tcgtggcggg acatgatctg gatggcccgg agcttgtcgc gcgaattggc
     2521 gatgccgtta gcggtattgg gtgtgtagat gtccatctgc tcgaactggc gaaccaccgc
     2581 ggtgccgaaa taggtaatcg acgctccaat ccggggaatg atggcgtcgt agtcctcgat
     2641 gggttggctg cggtgcgcca tatccggacc gtctccagcc agatcgatgg caaagcgcag
     2701 tgtgtccaac acgtcgacct cgtgaccccg gtccagggcc gcgaggtgca gccgcatcgt
     2761 cgagtacgag tcaggctgtc gggagaggat ggcgagcttc acgccgactc cgggatcgtg
     2821 cggggagatt ctggtggcac cattatgggg tgaatcggtg ggcggacgcc cgccaaaccg
     2881 ctaggagacg acctcgtgcc cgagaataag cggaagcgct caccgaataa gcctccgccc
     2941 gcgctcggtt ggcgtgagtg ggtgggtcta cccgaacacg gcttggagtg ggtgaaggcc
     3001 aaggtcgata ccggggcccg cacatcgtca ctgcacgctg ccgggctgca caccttcgaa
     3061 gtcgagaacc gtgaatgggt gcggttctcg atctacccgt ggcagcgatc gacgaccgat
     3121 gccatccaga tcgaggcccg ggtgctggac cgccgccggg tccgctcgtc cagtggcacg
     3181 accgagcggc gccccgtggt ggtactcccg gtgcgaatgg gcaacaagat ctatgacgtg
     3241 gagttcaccc tcactagacg cgacgagatg ggcttccgga tgctgctcgg ccgtcaggct
     3301 cttcggggcc ggttcctgat cgacaccggc cggtcctacc tcctgggcca gccgcctcgc
     3361 accgaacgac gggccaaccg gaccccaagt tctgagacga accccaagcc ggacagaaac
     3421 cccgaggtgt tccccggtcc aaagtcggac caaactccga ccaatggctg aacacggatc
     3481 gatcatcatc ggcgggcacg aggtccgaca gggcaccacc gaccacttcg aattgcccat
     3541 cggtcgtctg gtaaccggaa ccgacatggc cctacccgtc cgggtggtcc atggggccaa
     3601 gcccgggccg accgcctggc tcaacgctgc catccacggc gacgaggtag gtggcgtgga
     3661 agtcattacc cgggtgcttc gggatctcga cccgatggcc atgcggggaa cggtgctagc
     3721 cgtgccggta gtcaacgtgt ggggctttat gggcggagac cggttcctgc ccgaccgccg
     3781 cgacctcaac cgctcgtttc cggggtcacc atcgggttcg ctggccgccc agatcgccca
     3841 cctgttcatg accgaggtag tgggccgctc agtggtgggc atcgacctcc acacggcgag
     3901 cgaccaccgg tcgaacctgc ctcagatccg ggctgatctg gacgacccgg agacccggcg
     3961 tctggccgag gccttcagtg ctcctgtgat ggtgcacgcc cgaaaccggg cggggacact
     4021 gcggcaggcc gccacgcgac gtggggccac cgtgttgctc tacgaggccg gtgaggcact
     4081 gagattcgac gagacggcca tcgccaccgg agtggacggg gtacgacggg tgctggccgc
     4141 catcgagatg atcgacgggc cgaccgctgc ggaagacccg tctgccgagt cccgggccgc
     4201 cggctgggtc cgggccgggc gcagcggcat cctccacctg agcgtcgacc tgggtgaccg
     4261 ggtcgagcac cgacaggtgc tgggcaccat cgacgacgcc ttcggtaacg cggtggccgc
     4321 cgtccgggca tcgaggggcg gcatggtcat tggggtgacc cgctcgccgc tcgtcaaccg
     4381 cggcgacgcg gtggcccacc tggccgaaat cacctgaacg aggtctacgg gagcagccgg
     4441 gcggaaggga acccgatggg cgtcgctacg ctggcggctc tccgcgggtg tagttcaatg
     4501 gtagaacccc agcttcccaa gctgatgacg ggagttcgat tctcctcacc cgctcgctga
     4561 ccgacccgag gtcaacgcct acggccgccc cgggccacct cagcctcccg cttgacccgg
     4621 gtgagctcca cccgggcctc catggccttg tagtgctcat ccaatgggaa gcaccccgac
     4681 accaggccgt ttcggggcgc ggtggtgcag tcgctgaacg tccgacaaag gcggcgacga
     4741 tccaggggac gaccggccag cacgtcggac ggcaggtccg ggtagctgag caccatcctc
     4801 ccgagaccca cggcatccac ccggccggcc cgtacctcgg cctgggccac gtgggccagc
     4861 cactcctgga ggtacgagta gcccgaaccg acgaaggcca gttcagggtg tcgggcccgt
     4921 agagcagcgg tggcaccgat caaccgggcc acctcgacca gtggatcagc cggtgggagg
     4981 tagccgtccg acggcgggaa gtaggccggt cgctgggcgt gcgggcagtg gtaggggctc
     5041 ccggccgtgg cgcacaccat ggacactccg gcgtcggcca gcatccccag caaccggtcg
     5101 ggttcggaca ggtcgaggcc ggtccccgtt ccgtcaccgc cgaaggcgaa ccggtacgga
     5161 gcctcgacgg ctgggcggcc caccccgtcg ggccccgcct cgtggggagc caggtcgtac
     5221 aggctgagcc ggaccccgag gcctaggtcg gggaccgcgg cacggatggc agccaacgtg
     5281 cccagttgga agcgggcccg atcctcgagg gctccgccat acgacccgtc gcggtccacc
     5341 ccgctgagta actcgtgtag caggtagccg tggcaggcct tgacgtccac gaagtcgaag
     5401 ccggcctcgg cggccacctc ggcagcgacc acgaagtcgc ccatcaggtc atccaactcc
     5461 ccgtcgctca agacgctcga ttcgtcgagc ggaacccaac cgtccaatac ggggtgccgg
     5521 taggcgatcc gggggaccgg tgacccgtcg ggccgggacc accgacccga gtgggtgagc
     5581 tgcaggccga ccaccaggtc gttggtggga ccatggcgtc cggcgtgggc ggccaccaac
     5641 cgggatcgca gtccacccag gtcgtcgacg ctggaaggcc cgatgcacag ctggttgggg
     5701 ttggcccggc cgtcgacccg cacggcgacg gcctcgccac cccacacgag cttggcccca
     5761 ccggccccga agcgttccca ccgtcgggcc accaggtcgg tggggcgccc gtcggtggtc
     5821 ccgtcccagc cctccatggg cagcacggcg aacctgttgc cgaccgtgcg cgcggtgctc
     5881 ccggcgaggg ccaccgtcca aggtcgggcc aggggggcgt ccggtcccac ctccaggtcg
     5941 tcatccaggc acaggtccgt acccgtctcc aggtcgagtt cggcgagccg gtcccggacg
     6001 gcggccacgt cggccagccg acggacctgg gtgatgcggt cccgggtgct catggcgtcc
     6061 tcagagggtg gcctcgagcc gtcgggcgat gtcacccagg atctccatgt cggacccggg
     6121 cctgcggggc gctccgtcgg ggatccggct ggagccgatc cacccccgga gttccaggaa
     6181 tagggcggcg tcgtggcggt agccgggtac ggggtcccgg aaggtgaaga acccgaggta
     6241 ctgcaacagg tcgttgagct cgtggaacgt cgggtccccg gtcgcccagc gacggtcccg
     6301 ctcggcgaag gcgtcggggg cgaacgtgga cagccccagc aggtagtccg agccatacat
     6361 gaccatgtcg atggccaggt cgttgccggt cagcaccagg aagtcgggtc gcacctcgtc
     6421 gcgcacggcc aggcgctccc actcaaggcc acggtccagg gacgagtgct tggcccccac
     6481 gcaggccccg acctccagca ggccccggta ggcgtcgagg tcgtagatcc ggccgtaggg
     6541 cacgaacatg gggcccaatt cgaaggccag gaaccggtca cactgctcgg cgatcgatgc
     6601 gtgagcgccc acccagccat cgccgtcccg gctaatcagg ccgtgggtgg ggaacacgat
     6661 gggggtaccg ccagccgcct cgatacgttc cacctcccgg cggtagccgt ccaggtcgaa
     6721 cggatcgccg ggccggtcgt cgaggtgggc accggccacg aagtcgtcgc agtgggcggc
     6781 agccacatcc aacacccggc acttggtgac cgcgtccagc agctgcacga agccggtgtc
     6841 catgttgact gccggggtca ggccggcctc ggcggtccgt gccacgtggg cggccaggcc
     6901 gtcgaagtcc accgagccgt catcgtggtg gggcaggagg atggccgaca tgcccgtgat
     6961 ggtccggccg ggccgcaccg ggggggcacc gggcatcagt cggtctcccg agtggggagc
     7021 ctgatgagcg actcgatgtc agccccctcg tgaggctcgg attcgcggtc gcggaaacgc
     7081 tccagcagcg cgacggcctc gacgggcggc ggaggcagct ggccgggctc cggtccggct
     7141 ccagtcgggg cggcccaggc cgtacaggcc agcacgtgct cgccgggctc cagcgcgcag
     7201 gacagtaccg gcacggcgct ggacgggtcg accatcgagg cgttgggggg ctgcggtcgg
     7261 accgaggcct tccggggtcc ggacccggcg gcaggatggt cgacgaggcc ggtgacgtcg
     7321 cggaccgtgg ccagcagggc cgatccatca gcggtcgagg tacgcacctc gctctcccca
     7381 ccaaccaggc gaagcgagtc gacgccgacg gcgaagccag tctccaccac acgaacggcc
     7441 cgtccggtcc ggatcaggtg gacccggtgg tggtgggccg ccccgccgac caggacagtg
     7501 tcgaccacca cgtcgggcca cggccgccac cgcgaccaga gcatcggacc cgtttcggcc
     7561 tcgacgacct cgacgtcctc gatccttgag cggctccgtc ggtcgtcgcc gtcgaccagc
     7621 acaatggtgg agtcggtctc cgaagcgccc caaccgaatt cgacctcgcc ggtgaagccg
     7681 tagcgggagg agtaggcgag cttctcgtac ttggcctcga cctgttcgat gaaccggagg
     7741 ctcgtcgtgc ggccgccgga cagcgcgacc gcgtgcacgt cgtcccggtc gacgatccgg
     7801 ccggccaccg tctgggcgac cgggccgtcg gtcggaccgg gtcgggcctc gggaccggcc
     7861 cagaacgggt ggtcgtcagg ggcggccagc ccggcgaagg ccttcatggc ccagtagggc
     7921 gacccgggcg agttgtacgc ctcggccagg cgtcggttgt cgtagccgta cccgaccgac
     7981 agcacgccgt cacggtccga gatgggccgg cccgcccacc agcggaggtg tcgaccccag
     8041 tggccgcggg cctcggccca cggcacggcc tctacgtcgg ccagggcata ggcaccccag
     8101 aggctggact gggcgaaccg gtaggtcatg gagcggccat aggcgatgcc ggccccgtcg
     8161 ggtccgaacc agtggctgaa ctcggggccg aagagccggg cccgttcgac gtagcggtcg
     8221 gccgcctccc ggtcgcccag gccggaggcg tggaggatca gcccgtaggt gtggaaggcg
     8281 aagggcaggt accagtcgac gttgcccagg gtgccatcgc gggaccagcc gtcggccacg
     8341 tggtagtcct cgatccgctc gaccgaccgc tggccagcgc ccgcttcccc agcagcccca
     8401 actcgctcgc gccccatgtg gaccaggagc cggaagtact gccagttgtt gggagccggc
     8461 tcgaactcgt cgatgccgtc cagccaggca aggacccgct ggcgggccgg gtcgtccagg
     8521 ggttcccaga gttggccggg ggtgaaggcc agggcgaagc cgacggccgc catctcgacc
     8581 atccgctggt cgttgtcgcc tgcacacggc ccccagtact cgtcgccgtc ggggtcggtc
     8641 ccggcgacca ggccgtcgcg ccaacggtcc cagtaatcga agtggccgcc gcccacggtc
     8701 agggggacga tcccgtagag ggggcgggcc cagccctcca gctcggccac ccgccgttcg
     8761 aagagggcgg cgccgctgcc caggcgggcc cgggccccac cgggcgatag gtgccggaca
     8821 accggtttca cgaggtcgcg gacggcccgc tgggcatcgg ccttcgtggc gaacgggttg
     8881 ccggccagtg ggttggcccg gggatcagcc accgtcgtct cctctccctg cgtccagcca
     8941 ggtgcgaagc gtggtggcgt cgtcggccag ctgccccggg tcgtcgtccc gcacgtactc
     9001 gaggaaagcc cagcggtcac ggccggcatc ggtccacggg ccgtcgtcgg gcaccgcggc
     9061 cagggccggt tcccagaggg aggctccgtc ggcgagcggg taccggtcgg tgaagccggt
     9121 cccccactga tacacgtgca ggtgggagag ccgaccggcg acccggacga gctcggccac
     9181 ggcctcggcg tcgtcgaggg acacgagcgg ctgccagtag gtgaacaggc ccgggtggtc
     9241 cacctcggcc agcacggcga gggcggacgc cgcggtctcg gtcaacgtcc ccacgtggta
     9301 ttcgagcgag gtcgtcaggc cccgggcgtc gacgacggcc gccgcctcgg ctacgccggc
     9361 caccacggcg gcccgttcgt cggccggggc gtccggtccg gtgccatacg gggtccagat
     9421 cctgacattg gccacgccga gggccagcgc cgtgtcggcc acccgttcga cctcgtcgcg
     9481 gggagtctgc ccggcctgca cgtagctgcc gtaggagggg ctggtcaggt tggcctcccg
     9541 gcaccggtcg gccacccggg ccgcctcggc ctcgtccccg accgggacgt gcacgtcgct
     9601 gccccactcg actccggcca ggccaccggc cgccgccagg tcgacgacct cgtcgacctc
     9661 caactggcgg aaggtgatcg aacagagccc ggggcggatc atgcgggcct catgcgatcc
     9721 gatccaggtc ggcccggacg accgggtgga tcggcggttc accggccacg aaccgttcca
     9781 cctcggtgac ggccaggtcc cccatgcggc caacctcgct acccagggac cccgcgatat
     9841 gtggggtcag gacagcaccc tcgtggtcgt agagcggcga gtcggcgggt aggggctcgg
     9901 ggtcggaggt gtcgacgacg gcccggaggc gacccgacac gacctcggcg gtcagggcgt
     9961 cggtgtcgac gagaccgccc cgagccgtgt tgacgagcca cgccccgtct gacatgcggg
    10021 ccagctgggc ggcaccgatc atgtggcggg tggcctccag caggggggcg tgcagggtca
    10081 ccacgtcaga gacggcgagc agttcatcga ggccgacccg acgggcaccg taggactcga
    10141 tctcggaaag gtaggggtcg ccgtccaagt acgggtcggc caccaggacg tcgacgtcga
    10201 gggtccggag ccgttcaatg accaggcggc cgacggacga ggcaccgacc accccgatgg
    10261 tccggccccg ggtgcccatc cgggcgtggt cgaccaccgc ctcccgtccc cggacggcac
    10321 ggtggcggtc ccggacggcg aacgcgtcct tgagagccag caccacaacg gcgaaggtga
    10381 actcggccac cggcacggcg ttggccgcgg ccgccgaggt gaccacgacc ccgcgctccc
    10441 acagggcgtc ggtcaccagg ggccggacgg tgcccgccgc gtgggccacc agccggagat
    10501 cgggcaggac gtcgagcacc ccagcgtcca ggcggggaca accccacccg gtgaccagta
    10561 cctccacggc cgccggcagc tcgccgggcg tggccacggc acccggaacg acccggtcga
    10621 ccaccgcgtc cagacggtcc cggacatcag actcgaacac cagtgcctcg aggcccggag
    10681 ccatcaggag ggcggcccgg ggccgggagg gaacggtcga cacgggaccc atggtcaccc
    10741 accggtcccc ggccaaccaa accccgtccc gcttgccaag taatcaaagg tttgattaga
    10801 tggcgacgat gcgagctctt gaaagccatg tctgcgggtc ctggcacact ccggtcgctg
    10861 acggcacgat gacctaccac gccgtcaccg gcgcaccggt ggcgtcagtg tccagcgcgg
    10921 ggatcgactt cagcgcgtca accgcctatg cccgtgacgt cgggggcccc accctccgct
    10981 cgatgacctt ccatgagcgg gcagccctcc tcaaggccgc cggccagctc ctgctggccg
    11041 aaaaggagtc gctgtacgcc ctgtccaccg ccaccggtgc cacccgggcc gactcatgga
    11101 tcgacatcga aggtggagcc ggggtgctgc tgggctacgc gtccaagggc cgccgagaac
    11161 tccccgacgg aaccgtgcta ctcgacggtg atcccgaagt tctggcacgg gacggttcgt
    11221 tcttggccgc ccacgtagcc acctcgcgcc ttggggtggc cgtgcaggtc aacgccttca
    11281 acttccccat ctggggggca ctcgaaaagc tggccacagc gtggctggct ggcgttccgg
    11341 ccatcatcaa gccggccact cccaccgctt tcctaactga ggccatggtc cgcctcatcg
    11401 tcgataacgg cctggttccc gacggtgcac tccaactggt gtgcggcagc gtcagcggtc
    11461 tgctcgacca cctcgacggc caggaccacg tggccttcac tggctcggcc gacactgccg
    11521 cggtccttcg ggcccacccg aggctggtgg cccgctcggt ccgattcaat gccgaggccg
    11581 actcgctaaa cgcggcgatc ctcggcacag ccgccatacc cggcaccacc gagttcgacc
    11641 tcttcacctc cgaggtggtt cgggagatca ccgtcaaggc cggacagaag tgcacggcca
    11701 tccgacgggc actcgtcccc accgcgcaac tcgacaccgt ggccgacgcg ctggctaccg
    11761 cactggccga cgtccgtgta ggcgaccccg ccgatgaatc cacccaaatg ggggccctcg
    11821 tcggcaccac ccaacgcgag gaggtacgcg atgcggtcat gagtctgcgg tcgtccaccg
    11881 acgtggtcat cgacacctgc acctttcatg acgtggaccc atcggtcggc gccttcctgg
    11941 cccccactgt tctccgggcc accgatccaa ccgcccggtc catccatgcc actgaggcat
    12001 tcggcccggt gtgcaccctc atcggctacg acggtcccga cgacgccatc cgcctggcag
    12061 cccttggcgc cggcagtctg gtggcctcgg tggtcacctc cgacgtggcc gaggccgcgg
    12121 ccctcaccct gggcatcgct gcgcaccacg gacgggtcca cgtgctggat gcctcgacag
    12181 ccaccacctc caccggccac ggctcgccgc ttcccaccct cgtgcacggc ggccccggcc
    12241 gggccggcgg tggtgaggag atgggtggcc tccggggcat acgccaccac atgcagacga
    12301 cagcgatcca gggctcgccc gacgtgctca ccgcagtgac cgggcagtgg atgcccgggg
    12361 ccacccgtca cgtcgaccga ggccacccgt tcaaacttca cttcgacgac ctagaactcg
    12421 gtacggccat ccggaccgac agtcgcacgg tcactctgga agacatcgag ggctttgccc
    12481 atagcaccgg cgaccacttc tacgctcaca tggatgaaaa ggccgcagca gccagtccga
    12541 tcttcggcgg acgggtggcc cacggttacc tcgtgctgtc cttggccgcc ggcctgttcg
    12601 tttggcccga tccggggccg gtgctggcca actacggcat cgaccggtgt cgcttcgcca
    12661 agcccaccta cccgggcgac accctgaccg tctggctgac cgccaagcga aagaccctgc
    12721 gaaccggtgc cggctacggc gaggtggcat gggacgccca agtggtcaac caggccgacg
    12781 aggtggtggc cgcctacgac gtactgacca tggtggccaa tcgtcccggg gtgaacggcg
    12841 cggccgagtc ggaaccagcc tgatgggacg tacctgggcg tcgatggacg agttcgaagc
    12901 gttcctcgac gacggcggca tcgtcgaggt cgacgacgag attcctgacg gctaccggca
    12961 ggcggtgttc gccttcatcg agatgcacgc caactccgaa ctcatgggtg gcctcaccga
    13021 acgcgactgg atcccccgca cccccgggct tcgccacaag atggccgtcc tggccaagac
    13081 ccaagatgag atcggccacg gtcacctgct ctacatggtg gccgccgaca tgggactcaa
    13141 aacccgccgc gagatgttgg aggacctgtt cgccgggcgg tccaagttcc acaacgtctt
    13201 ccactaccgg gccgccacgt ggggcgacca ggtcgccatc tcgttcctgg tcgatgccgc
    13261 ggcactggcc agccagcagg ccgtattcaa gaactgctcc tacggcccct accggcgaat
    13321 cctgaagcgg atcatctccg aggagggatt ccacatgcgg atgggcgagg aacggatgat
    13381 gctcatcgcc gagggcaccg acttccaacg cgccatgttc caacagtcgc tggacaactg
    13441 gtggtggccg gccctgcagc tcttcggacc cgattccaag cctgatgacg tactcctgcg
    13501 gtggcacatc aagtcggaac gcaacgaggt gctgcgggcc cgctgggtgc agaagttcgc
    13561 cccgctgctc gtctcctacg gcttcaccat tcccgacccg ggactagtcc acgaccccga
    13621 ggccgacacg tggaccgccg gacccatcga ctggggacca ctgaagcgga ccctggccat
    13681 ggccggaccc gactcggcac gtcgcatcgg tgaagcggcc gccaactggg caaacaccaa
    13741 ctgggtacgt gacggcctgg acgccgcatc cgaacaggcc accggagtcc aggcatgacg
    13801 gcgatcccga gcgtggagga tgtgcgtgtc gcggtggcca cggtggatga ccccgaatac
    13861 ccgggtatct ccattgtcga cctcggcctg ctggaatcgg tcgacgtgcg gcccgacggt
    13921 gacgtggtgg tcggcctagt gcccaccttc tcgggttgcc ccgcgttggc catgatcgcc
    13981 gatgacgtac gcgccgcagt ggccgccatc gacggggtga ccggctcccg ggtggatgtc
    14041 cgctggttga ccggcccggc gtggaccgtg gaacgcctga ccggaactgc ccgacggacc
    14101 atggctgaag agttcacggt cgccgtccga atcggccccg gtcccgttcc gtgtccacgg
    14161 tgtggcaacg acactgccga ggagtcgatg ttcggcccca gccggtgtcg agccgtccac
    14221 gtgtgccgtt catgtaccga ggtcgtggag gtgatgcggg cctagggccc gccgacgcca
    14281 tgaagcgcta cgaggtattc ctcaagaagg acggtcggga cgaataccgc cacgccgggt
    14341 cgctagacgc gcccaacgac gagcttgctc tcgtgttggc ccgcgagacc tacctccgac
    14401 gagcagaagg cgaccggatg tggctggtcg accgagcgca tctggtggtg ggtgacaccg
    14461 acttcgtggc ccccaatgcc gacaaaccac accgccacaa cgacggcgag cgcatctccg
    14521 aacggcgaaa gcgcctccgt gaggatcaag aacccaccgg agaggatgca tcgtgaccga
    14581 cccatggaac gtcgacatcc gagaattcgt cctggccttc gccgacgacg agcacctgat
    14641 gggccaacag cacactgagt ggatcggcgt agccccgttc ctcgaggagg acctggcctt
    14701 cagctccatc gggcaggacg agttaggtca tgccgccacg ctgtacgcca tcgtggccgg
    14761 cgacggcgac ccagaccgcg aagcgggcat cgacgacagg cagctcgacg ctctcgcctt
    14821 cgactccgac ccctcacggt ggcggtcggc ccacctcacc gagatcagga ccgacgaatg
    14881 ggcccatgca ctggtccggc actggctcta cgacaccgcc gaacagctcc gatgggagct
    14941 cgttgctgag tccacactgg aagcactcgc cagcgcggcc gcccgtgccg aacgcgaaga
    15001 atggttccac cgtcgccacg ccgatggcct cctcgacact ctgttgccgg tatctgacgc
    15061 cggcgaccgc ctaaaggcgg cactggtcga cttgctcccc ctggcggtgg gcctgttcga
    15121 cccggtggct ggcgaggtcg aggcggtggc gtcaggcgtg accgcagcac cgttcgattc
    15181 ccgaatgccc gagtgggctg accgggtccg ggcccgcttc gacgtcgacc ttccagccac
    15241 tggcctgtca ccgtccgacc ggctggcccc gaccggtcgg acgaaccgct gcgatgcctt
    15301 cggtccactg ttgtcgagga tgcgcgaggt gctcgacctc gacccggccg ccatctggta
    15361 accgagcctg ttgcccatca gtcgcgttac ggttcgcgac catggtgctg gcccccgacg
    15421 aggtgatcgt cgccgacgac taccacacgg ccggcgagcc gttccgaatc gtcgacctcg
    15481 gccccatgga aggcaccacg gtgctggacc gccgatcgtg ggctacggcc aatctcgacg
    15541 accaccgtcg gttcctgatc cacgaaccac ggggccacgc cgacatgtac ggcggcatgg
    15601 tcgtgcctcc cgacggccca tccgctggtg ggaacagagc cggcgatctc ggcgtggtgt
    15661 tcttccacaa ggacggcttc tctacggcct gtggccacgg caccatcgcc atggccacct
    15721 gggccatcga caccggccgc atcgaagcgc catccgacgg cgagattccg gtggtggtcg
    15781 atgtcccatc gggacgcctg cacaccgtcg cccggatgga agcgggcagg gtggcctcgg
    15841 ttcgcttcac caacgtcgag tccttcgtga ccgcccgcga cctaaccgtg cagaccgacc
    15901 tcggaccggt gaccgcccac gtgtcattcg gcggcgcctt ctacgcttcg gtggccatcg
    15961 acgacctacc cgtatcgtgt cgcccggccg acgtggaccg cctcatcgtc ctcggacggg
    16021 cggtcaaagc ggagttggcc gaccacccct cgaccgttca tccgtctgac gaccggttgt
    16081 ccggcctcta cggcacgatc ctccacgaaa cgattggcct ccaagaagca gcctcctcgg
    16141 acagcggccc cgtccaccaa cgaaacgtga cgatcttcgc cgacggccag gtcgaccgat
    16201 ccccctgcgg gtcagggacc tgtgcccgtc tggccctgtt gcacgacagc ggcgaccttg
    16261 agatcggcgc caccttccta aacgagggcg tggccggtgg ggtgttcgac gcccggatcg
    16321 aggcggccac cggtggcggg atcatcccga gcgtggaggg ctcggcccac cgccatgcca
    16381 ccaccacctt ccacctcgac ccgcatgatc ccgtgggact ggggttcctc ttccgatgac
    16441 ccgcctccca tgactgatac cccatgaccg gcctccccca tttcgatgcc gaggccatcc
    16501 gggcagtggt cgacatgccg acctgtatcg cggccctcag cgatggcagt cgggagttgg
    16561 gcgacctcca cccccgggcg caggtaccgc tcggcccggg cgacgacttc ctgatgatgc
    16621 cggcagtgtc accagccggg attggagtga agatcgtcaa cgtcgtctcg ggcaaccgtg
    16681 accggggact acccctcatc cacggcttct acctctactg cgatcgggag accggggtgc
    16741 cggctgccac gctggacggc tcggcgctga ccaccctgcg tactccggct gcttcggctc
    16801 tagctgcaga cctcctggct cgtcaagatg tgacgacgct cggtgtgttc ggcaccggta
    16861 tccaggcccg aggccacatc gaggcgatgc tggtggtgcg accaggcatc gaccgcatcg
    16921 tggtgtccgg tcgaactaac gcttcggccg tcggcttcgt ggccgacccc accgtgcagg
    16981 cgttggccgg tgatcgggaa ctggtggccg gaacgcccga ggagaccgcg gggtgtgccc
    17041 tggtgtgcgg ctgcacctcg tcgaccgagc cggtaattcc cacgaccgcc gtccgtccgg
    17101 gcgcccacct ggggttggtc ggtagttact cgatggcccg ccgggaggtc gacgccgaac
    17161 tgctggcccg ggccacggtc ttcgtcgatg accgccatgc cgcagcccac gaggccggtg
    17221 acctgatggt gcccgccgag gccggcgact ggtcattcga tgcggtggcc ggtgacctcg
    17281 ccgaactctg cctcggaacc gctgggcgac gagacgacga cgagatcacc ctgttcaagt
    17341 cggtcggact agccgtctgg gacctgatcg tggccggagc agtcgtccac gctgactgga
    17401 cacaccgccc aaacggcaga cagtcaaacc tttgattgtc taggagaccg atcgttagga
    17461 ccccctgatg cccctcccct tcgaccccgt ggacaccgtc gggcttcctg ccgagcagaa
    17521 gcgctccctg cagggagaac gcctgtccgc gctggtgaac agactggcca ccggcgacaa
    17581 caccttctgg tcagaacgtc tggctgacat cgacccggca tcgatcacct cggtggacga
    17641 tctcccccgc ctgccgttca ccgtcaagca ggacctccgc gaccagtacc cgttgggcat
    17701 ggtcaccatc ccggtggagg ccaccacccg tctccacgcc agttccggca ccagcgggaa
    17761 accgacgatt gtcgtctaca cccccgctga cctcgccatc tgggccgagg tgaatgctcg
    17821 ggcccttgcc ctggctggca cccgatccga cgacatcctc cacaatggct acggctacgg
    17881 cctgttcacc ggtggcctcg gccttcacta cggcggggag cgcctcggct gcaccgtcgt
    17941 gcccgtgtca ggtggcaaca ccgccctcca actccagctc ctcgaggacc tgggcagccg
    18001 ggtgctgtcg gccacgccct cgttctgcct cgtcctggcc gaacgggccc atgccctggg
    18061 catccgggac caactcggcg tcgagatcgg catcttgggc gccgaaccgt ggtccgaggg
    18121 catgcgtgag cgcatccacg aggcatgggg cggcagcttc accgcactgg acatctacgg
    18181 cctatcggag atcatcggcc ccggcgtagc gatggaggcc cccgatgacc tcggtgcctt
    18241 gaacgtcttc gacgaccact tcctgcccga gattgtggat ccagccaccg gtcagcccct
    18301 gcccgatggc gagttcggcg aattggtcat caccacgctc accaaggaag ccatgccgat
    18361 gctgcggtac cgcaccggcg acataacccg gattctcccc aatacgggcg acacggccgg
    18421 gcccggcacc cgccactgga cccggatggc ccgcctcacc gggcgggccg acgacatgct
    18481 catcattcgg ggcatcaacg tgtacccgcg cgagattgag gccgtcctga tggacgaccc
    18541 cgacgtgggt gccaactacg ccatcgtcgt ggaccgccgg ggttccatgg tcgagctccg
    18601 ggttcgcgcc gaggccacgg cagcggccag ctcggccacc aacctggtcg tcggcggcga
    18661 acgcctggcc aggctgatag cggaacgcat ccggatccga gccgacgtcg agatggtgcc
    18721 cgagggctct atgccccgca ccgaggtcgg caaggtcaaa cgggtcttcg agcaagtaga
    18781 cgacaccaat cccttggaat gactcgccca ctggtctgaa ggcccgaaca ccagcaaaaa
    18841 accttcattt ctgatggtcc gtcagatttc agacgggagt agcgttacct agcgtgtcgg
    18901 accgccctga ggacactcct gaacaggccg aatttcgctc cgcgtcgcgc tccttcctag
    18961 cccaacacgc cgaaccccgt acacggatcg atccctggca ggtgtccggc ttccccgacg
    19021 acgccgaggc gaaggtgtac ttcgaacatg gtcgtgcctg gcagcggact ctggccgacc
    19081 acggatgggc cggtctgacc tggcctgccg agttcggtgg cggtggccgc ccaccatgga
    19141 ccgaccgcat ccttagggaa gaatccgcgg actacggctc ccaccccggc ttcatcggcg
    19201 ccaccatcgc catgctcgga cccaccttgc tggcccacgc gtcagatgaa ctcaaggccc
    19261 gattcctccc gtctctgctc agcggcgagg tggcctggtg ccagttattc agtgagccgg
    19321 gcgccggctc ggacctggcc agcctctcta cccgggccgt acgggacggc gaccactggg
    19381 tggtccacgg ccagaaggtc tggaactcat gtgcccagtt caccgactgg ggattcctac
    19441 tggtccgcac cgaccccgat gctcccaagc accgtggcat caccttcctg ctggtcgaca
    19501 tgacctcgcc gggcatcgag gtccgacccc tcgtgcaggc caacgggtcg tcgcacttca
    19561 acgaggtctt cctctccggt gtccggatcc ccaccgacca gatggtgggc gaggttcacg
    19621 gaggctggac cccgacccgc accgtgctgg ccaacgaggc ggcgttcatc ggtcgcggcg
    19681 aaggcgctcc ggcctcggac cgcctccgtg accttgccgc ccgacacggt ggactcgacg
    19741 atcccaccgt ccgccaacgc ctggctcgca ttatcagccg ggaacgcctc cagagcctga
    19801 tgggccaacg gatccagtct gcggtccgag atggacagca accccccttc gatccggcac
    19861 tcactaagtt gctggccgcc ggcaccaagg tcctgactgg tgacctcgcc gctgacctgg
    19921 ccggcccatc agccattgcc ggtccgatca ccaacgaccg ggagggcacg tggatcagag
    19981 ccgaggtcct gaaccgcttc gccatttcca ttggcggagg caccaccgag gtccagaaga
    20041 acaatctggc cgaacggtca ctggggctcc cacgggagcc ggccaacgac cgagaagccg
    20101 catggaagga tgtcctccgc agctaagcgg gaaccggggg atgcgaacac cgtgaccgaa
    20161 gaacacaccg aggagtcgat gtcctccggg gaaactcccg gcgagacagg cgcggacagc
    20221 aacgccgcgt ccctcgcggc atctgtactg gccgaagagg ccgctcgcca cgccgagcag
    20281 gaaaccaacc agatcatgtt ccccgacgag ctgctgccag gggtcaacag cgccggccta
    20341 tcgctgaaga aggggctcgc tatgggtggc ggcgcggcga ccttcgtcgt actggccatc
    20401 cttaactcgc tggacgaact ccagatggcc gccatctccg tgctggcccc cgacatccgc
    20461 gacaccttcg gggtcagcga cggcaccatc acgtttatcg ccagctcatc gggtgccttt
    20521 gtggtactgg gcgccatccc catgggctgg gcagccgacc ggttccgacg gatcccgatc
    20581 attggctggt ccagcatcat cttcggcgcc atggtggcca tgtcaggttg ggcggtgaac
    20641 gccttcacct tcttctgggc ccggttcggc gtcgggatcg ccaaggccaa caccatcccg
    20701 gtccactcgt cggtcattgc cgacacctac cccatcggca tccgtggccg catcggcgcc
    20761 atcgacaagg gcaccggtcg cctcctggcc gtgaccagcc cgatcctcgt aggcgccatt
    20821 gcagcagcag ccaacggccc cggcgagatt gacggctggc gctgggccta ctacctcctc
    20881 gggattccgg tggccgtggc cgctatcgcc gccttcttcc tgaaggaacc cctgcgggga
    20941 cgctgggaaa aggaggacgt ccttgacgaa tcgttcaccg aagacgaccc ccttcccgtc
    21001 tccatggacg ccgccttctc ccgtctaatg cagatcaaga ccatcaagac ggtggtcgtc
    21061 ggcttcagcg cactgggctt cggcctgttc accgccccgg tgctggagaa cctctggcta
    21121 gaggacgagt tcggactcga atcattcgaa cgaggagcat ggggcaccgt ggccggcctg
    21181 gccaccgtcg gcgcgctgat ctacgtaggc cccaagttcg accggatgtg gcgcgagaac
    21241 ccgacccgca ccctccacct ggtgggcgca cttatcggat tctccgccat cttcaagccc
    21301 atccaatggg ccatgccaac cgttccgctg ttcatcggct tctcgatccc cacgctggtc
    21361 atgctgagca cggcgtttgc catggtcggt ccgctcatgc aagccatcgt cccctaccgc
    21421 ctacggggta ccggcacggc gctcatcacc ctctacatat tcttcatcgg cggcaccggt
    21481 ggcggcctca tctcgttcat gttcgccgat tcctggggcc ctcgggtcac cacgctggtg
    21541 ctgaccgtgc ccagcgccct catcggcggc tggatcatgt accggggcgc ccgccacatc
    21601 cgcggcgacc tctccctgaa cgtccaggaa ctgctcgacg aacaggacga acagcgccgg
    21661 gccggtggcg acggcgaggt ccctgcactg caggtcaaca acctggactt ctcctacggg
    21721 tcagtccagg ttctgttcga cgtggccttc gaggtgaaga agggcgagac cctggcccta
    21781 ctgggcacca atggtgctgg caaatccacc atcctccggg tcatcagtgg cctaggcgtt
    21841 ccccagcggg gcgtggtgcg gctgcacggc cgcacggtca cctactcgtc gccccaacta
    21901 cggtcccaac tcggcatcca gcagttaccg ggcggcaagg gcgtgttcgg cgatatgacg
    21961 gtccgccaga atctgatcat gggcgcctac gtccatcggg ccgacaaggc tgacgtggaa
    22021 cggcgcatcg ccgacgtact cgacttgttc cccgatctgg ccaaccgtca gggacagcgc
    22081 gccggatcga tgtcaggtgg ccagcagcag atgctggccc tggcccgagt gctgctccat
    22141 gaacccgagg tcctgctcat cgacgaactg tccctcggcc tggcccccac cgtcgtccag
    22201 gacctcctga tcctcatcga acgcctccag gaacgcggcc agaccatcgt cgtcgtcgag
    22261 cagtcgctga acgtggccct ggccattgcc gaccgggcca tcttcctcga aaagggccaa
    22321 gttcggttcg aaggcgcagc ttccgagttg gtcgagcgcg acgacctggc cagagccgtc
    22381 ttccttggaa cggacggtgg ctgagatgga cgtgcttgcc tccgaactgg tcgcctcccc
    22441 cttggttctg gccgtctgga ccacccgtca gctctggttc gacggccttg tcaatggcat
    22501 ggtcttcggt ctgctggccc tcggggtggt gctcatctac cgctccaccc gggtcatcaa
    22561 tctggccgtc ggcaacatgg gcctgcccgc ctcgggcctc atgggtgtca tggtcatcaa
    22621 ctacggattc ccgtactggg cggccctggc cctagccctg ctggtcggga tttcggtggg
    22681 cgccatcgtc gaacgggcca tcatccgtcg cctgttcgac gccccccggg tcatcgtgct
    22741 ggtagccacc attggtgtag cccagctcat gcaggccgtc ctggcctcgt tccccgacat
    22801 cgagaaggtc cgcgggcagc gttacccggt gcccctcgga ttcaagtgga acgacgtctt
    22861 cggcctgcgg ataaccggac cgaaactcac aatccttatc ctcgttcccc tcctagccct
    22921 tggcctgtcg tggtttttga accggacggt gttcggccag acggtgcagg cctcggcatc
    22981 gaacgccgac ctggcacgca tctcgggcat cgatcccaag acggtgcaac tcttcgtctg
    23041 gacggtggcc ggcctgctct cgagcgtgtc gctgctgctc ctctcgggca accgtggctc
    23101 gatcaccggc atggccaacc tgggccccaa caccatgtcg agggccctgg tcgccgcggt
    23161 gatcgcgggc atggtctcgt tcccccgcgc catcatcgcc ggcctgctga tcggcgtggc
    23221 ccaggcccac gtgcagttcc tgttcctcga acagggcggg ctgatcgact tcattctctt
    23281 catcgtggtg gccatcgccg tggccttcca aagccggggt gccgccgagt ccgaaggatc
    23341 gttctccttc tcggctcgac gtcgacccat cccggaacga ctccgagaga tctggtgggt
    23401 ccggcggatg tcgaccatcg ccctaggcct tctgctggcc atcgccgtcg tgctgcccct
    23461 cctggtgacc cgcccatcgc gacatctcct gtacgccagc atcatcgctt tcgccgtgtg
    23521 tgccatgtcg atgaccatcg tgaccggctg ggccggacag ctctcactcg gtcagatgac
    23581 gttcgccggc gtcggcgctc tcatggctgc cggattcaac cggggcctcg aagtcggcat
    23641 cggcatcggc gactggcact tcttcacgat cagctttccc cgggttccgt acctggtatc
    23701 gatgatgctg gcgtctctcg tcgccgccgc cgtagcggcc ctcatcggac tcggcgcgct
    23761 ccgcgtcaag ggtctactgc ttgccgtgac cacctttgcc ttcgccctgg ccgcccagca
    23821 gtacgtgttc cgacgtcctg ccttcaacgg tggtttcacc cagagcatcc cgttccgtcg
    23881 gggcagtgtc ggaccgatca acctggacag ccagcgttcg tactactacc tgtgcctcgc
    23941 cgtcctgatc ctcgtgctgg tcgtcgtccg ggccctgcga gccagcggga tcgggcgatc
    24001 aatcatcggc gtacgagaga acgaatacac cgcagcggcc tacacggtcg gtccgtcacg
    24061 cacgaagctc atggcgttcg cacttgccgg agggatcgcc gggctaggcg gtgccctgct
    24121 cggcggcctc gtacagaaca ttccctacac cgagcgcctg ttccagatcg gcgactcgtt
    24181 gcgcctggtc tccatggtgg taatcggtgg cttgggcacc ctgatgggtc cggtcattgg
    24241 agccatgtgg gtggtcggcc tgcccgcctt ctggcctgac aacgacctcg ttccgctgtt
    24301 cacctccagc atcggcctgc tgatcctgtt gctctacttc ccaggcggcc tgatccagat
    24361 cgcctacgcg gcacgcgatg ccgcgctccg acttgccgag gcgcgtctcg gtgaggcttc
    24421 cacggagcgg gcgacggtac cccccgcggt gatatccagc cgaaccacca cacgtccggt
    24481 gctgaccggc ccggctctcg cggtcaccga cgtatcggtg accttcggtg gcctccgggc
    24541 ggtggacaag gcctccatgt tcgcccaacc aggcgaggtc gtgggcctta tcggtaccaa
    24601 cggcgccggc aagtcgacgc tcatgaacgc catcggtgga ttcgccccgt ccgagggcac
    24661 cattgagatc ctctgccggg atgcctcaca aatgaactcg gccaaccggg cgcgtctggg
    24721 tctgggacga acctttcagg cagcccgcct gttccccgac ctcaccgttc gcgagaccgt
    24781 gcaggtcgcc ctcgaggcac gaggacgtac cggtctgttg tcgaccgccc tccaccttcc
    24841 ctcggccacc cgggccgaac ggtccaaacg gtccgacgcc gacgacctga tcggctttct
    24901 gggccttggc cgctactccg atgctttcgt ggccgacctc tcgacgggaa cccgacgcat
    24961 cgtggaactg gccggtctac tggcgctcga tgcacaggtt ctctgtctgg acgaaccaac
    25021 cgccggcatt gcccagcggg agaccgaggc attcggacca ctgctaaagc agatccagca
    25081 ggaactgaac gccaccttga tcgtgatcga acacgacatg cccatgatta tggccctctc
    25141 ggaccgggtc tactgcctgg aggccggaca ggtcatcgca cagggcactc ccgatgaggt
    25201 gcgaaacgat ccacaggtgt tggccagcta cctgggtacc gaccagcggg ccatcgaccg
    25261 ctccgactcc taatctccaa ggtcccgccc gccggggatc ccgcccaaca gagatcctga
    25321 cggcaggccg ttactcctcg ccgtcgctcc ctgagcggtt ctctagcagg tcgtcacgga
    25381 tctgggtggt ttcgacggct gccgccggtc cctccgacac ctggttgacc cagacggtcc
    25441 gctgagggaa cggaatctcg attccgttgg tgtcgaatgc cttcttcagg cgagcccgaa
    25501 taagacgacc ggtggcccac tgttcgcccg gctcggtttt gacggcgagg cggatggaga
    25561 tggcgtcggc tccgaagttc tgcacgcccc agatctctgg ctcctcgatg atggtcgccg
    25621 actcgagttc ctctcgccaa acgctgtcgg ccacctcctt gatgacgctg gccgctaggt
    25681 cgatgtcggt gttgtaggcc acgtcgacgt cgagcaccgt gcgggcccag agttgcgacg
    25741 aattgcctac tcggcggatc tcgccgttgg gcaccaccca gagcgccccg tggacgtctc
    25801 gcagcaccgt ggttcgcaag gtgacccgct cgacggtccc tgatgcggca cccacgtcga
    25861 cgtagtcgcc gactccgtac tggtcctcga tgatgatgaa gatcccggcg atgaagtcgg
    25921 cgaccagtga ctgggcgcca aagcccacgg ccaggccgac gatgcccgcg ccggcgatca
    25981 acggacctag gtcaagaccc aactcaccga gagccaccat gaacgccagg gcgtacaccg
    26041 agaagccggc gaggcttcgg agcaccgcac cgagggtcat ggcccgctgg cgggaccgct
    26101 cggcctgttc atggatcttg gtcagctttc cgcgtgcccg acggccgaga cgggacagtg
    26161 tggccgacgc cgagtcctcg gccacggtct cctcctgggt gcgggtctcg accaggcgat
    26221 tgaccatacg gtcgatggcc cgcttgacca gtcggttgac tatcaacgcg ccgatcagga
    26281 tcaccacgac cttcaagggt cgctcgatca gccagtcgac gagcgaagca agcgcctcgt
    26341 tgccggtggt atcccagatc cattcgcagg tgtatcccgg ctcaagtcca caggcttcca
    26401 ccagcccctg atccaatccc atggtcgtct ccgtttcagc catcgacatc gcctccggcc
    26461 cggacggtag tggaccgggc cgacgaccgg ccggagccgt tggcaaccgt cacggtggtt
    26521 cagccagcga gcgtggccac ggcccatagg gcggcggccg tacccaggac gatgtagagc
    26581 aggctgcgcc acaacggcgc ccgctccaag tcgccctctt cacgtccggc tggtggccgg
    26641 attagagcca tggcgttacc gacggccatt gccgcgccga gggccaacag cagccagctc
    26701 aacagatttt cgcccaggaa cacgctatta cccggctcgg gacatgttgg caaagcgcgt
    26761 gtacctggga agccatgcca gccggaccgt gccggtcggg ccgttgcggt gcttggcaac
    26821 gatgacctcg gacagtccca catcggccgt gtccgggttg tacatctcat cgcggtacag
    26881 gaagatcacc acgtcggcgt cctgttcgat cgaacccgac tcacgcaggt cagccagcat
    26941 cgggcgcttg tcctggcggg cttcgagacc acgggagagc tgggataacc cgatcaccgg
    27001 gcactgcaac tcacgggcca ggatcttgag tccacggctg atctcggcaa cctctacctg
    27061 gcgactctcc gctgacgagc gaccggtcat cagctggatg tagtccacga tcaccacacc
    27121 cagattgccg acccggctct tgagacgcct cgccttggcc cggatctcca tcacagagat
    27181 attggggttg tcgtcgatcc agatatgcg
//
LOCUS       DASCMR010000041         4183 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000203613, whole genome shotgun sequence.
ACCESSION   DASCMR010000041 DASCMR010000000
VERSION     DASCMR010000041.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4183)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4183)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4183
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000203613"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..220)
                     /locus_tag="QGG16_00925"
     CDS             complement(<1..220)
                     /locus_tag="QGG16_00925"
                     /inference="COORDINATES: protein motif:HMM:NF012510.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HJP23870.1"
                     /translation="MPVGGEDSACRRRRELRGVPTVNHTSNVPITGVLVANRGEIASR
                     VFRTARSMGMRCVAVYVDADATAPYVAEA"
     gene            complement(154..1800)
                     /locus_tag="QGG16_00930"
     CDS             complement(154..1800)
                     /locus_tag="QGG16_00930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HJP23871.1"
                     /translation="MLHRLLAPPLASTLDTRSDAFAQNRSDMEEHLAVIEELLDEADA
                     GGGPESMARLRSRDKMPIRERIAHVVDPDSPFLEISPLAGYESSYTVGGGFVVGIGVI
                     AGVECVICGNDPTVLGGAMTPYMAKKWMRAIEIARHNRMPYVSFVESAGADLRVQTGG
                     GSGGRRARTDHFAETGRFFYEMIELSKLAIPTICVVFGSSTAGGAYQPGMSDYTIFIK
                     EQSKVFLAGPPLVKMATGEDANDETLGGGAMHAEKSGLADYLANDEMDALRMCREVVS
                     HLDWRKAGPDRSYEVTEPIHDVEGLMGMVSKDLKQPVDVREIIGRVVDGSRFEDFKPR
                     YGPTMICGFATIHGYPVGILGNNGVIYPEAAEKAAHFIQLCNRQDTPLVFLQNITGFM
                     VGTDFEEAGIIKKGSQMINALTNSTVPHLTVIIGASYGAGTYAMSGRGYENRFTFLWP
                     MAKIAVMGPKQIAGVMSIVRRGQAARKGIEFDEEADAEIVRQVEAAQEKGSLALEATG
                     AVSDDGIIDPRDTRTVLGLCLSVVRTAPVEGAENYGVFRL"
     gene            1908..2768
                     /locus_tag="QGG16_00935"
     CDS             1908..2768
                     /locus_tag="QGG16_00935"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012790.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HJP23872.1"
                     /translation="MPTRYEFAPIVEASEVAAIRGVVMCDVRWYLDGRSGRDAYDAGH
                     LPGAVFVDLDEHLTSTPGSEVGRHPLPTPEAFARSMRDLGIGRDDPVVAYDDAGGMAA
                     GRLVWMLRVLGRPAALLDGGVGAWDGPLETSPTVRSPVVMPVEPWPVGAVATIDEVAT
                     LAASGGAEGIVLDARGAERYRGESEPMDPRAGHVPGARSAPFAVNLEVEGPRTGRFRS
                     PDDLVSRYEEIGVVDATNVVAYCGSGVSACHDLLAMEHAGLGRGRLFVGSWSQWSHSD
                     RPAAVGPEPG"
     gene            2839..4137
                     /locus_tag="QGG16_00940"
     CDS             2839..4137
                     /locus_tag="QGG16_00940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase/cysteine synthase family
                     protein"
                     /protein_id="HJP23873.1"
                     /translation="MTDREWGFRTRALHAGGQPDPTTGARAVPIYQSTSFVFDDAADA
                     ADLFALQKYGTIYSRMSNPTVAAFEERMASLEGGIGAVATSSGQAAEFLTAAALAEAG
                     TNFVASSALYGGTHTMFDTTLGRFGIDARFVDGDDPEAFAARIDDDTRFLYTEIIGNP
                     SGSVADVAAVADVAHAHDLPLVVDSTFATPWLCRPIEHGADIVVHSATKFIGGHGTSI
                     GGVVVESGRFDWGSGRFPQMTEPNAGYNGLRFWENFGEFAFCTKLRAEQLRDVGASLS
                     PFNAFLLLQGLETLPQRMVEHVANARVVAEFLDGHPAVSWVAYPGLAGSPYRALADRY
                     LPDGPGAVFTFGIAAEGGAGRAAGAAFIERLQLVSHLANIGDARTLVIHPASTTHQQL
                     SEEAMVAGGVSSDMVRLSVGLEDVDDVLWDLDQALTGGVQ"
BASE COUNT          656 a         1333 c         1432 g          762 t
ORIGIN      
        1 cggcctcggc cacgtagggc gcggtcgcat ctgcgtcgac atacacggcg acgcaacgca
       61 tgcccatgga gcgggcggtg cggaacaccc gagaggcgat ctcgccgcgg ttggcaacga
      121 gtacccccgt gatcgggacg ttggaggtgt gattcacagt cggaacaccc cgtagttctc
      181 ggcgccttcg acaggcgctg tcctcaccac cgacaggcat agtccgagca ccgtgcgggt
      241 gtcgcgtggg tcgatgatcc cgtcgtcgct aaccgccccg gtggcttcca gtgcgagaga
      301 ccccttctcc tgagcggcct caacctgtcg aacgatctcg gcgtctgcct cctcgtcgaa
      361 ttcgatgccc ttgcgggctg cctggccccg tcgcacgatc gacatgacgc cggcgatctg
      421 cttgggaccc atgacggcga tcttggccat cggccatagg aaggtgaacc ggttctcgta
      481 gccccgcccc gacatggcgt aggtgcccgc cccgtaggag gcgccgatga tgaccgtgag
      541 gtggggcacg gtggagttgg tcagggcgtt gatcatctgg gagcccttct tgatgattcc
      601 cgcctcttcg aagtcggtgc ccaccatgaa cccggtgatg ttctgaagga aaaccagcgg
      661 tgtgtcctgc cggttgcaga gctggatgaa gtgggcggcc ttctcggcgg cctccgggta
      721 gatcacgccg ttgttgccga ggattccaac cgggtagccg tggatggtgg cgaacccgca
      781 gatcattgtc ggtccgtacc ggggtttgaa atcctcgaat cgggaaccgt cgacaactcg
      841 accgatgatc tccctgacgt cgaccggctg cttgagatcc ttggacacca tgcccatgag
      901 gccctcaacg tcgtggatcg gttcggtcac ctcgtatgac cgatcggggc cggccttgcg
      961 ccagtcgagg tgagacacga cctcgcggca catgcgtagg gcgtccatct cgtcattagc
     1021 caggtagtcg gcaagaccgg acttctcggc gtgcatagcg ccgccgccca gggtctcgtc
     1081 gttggcgtcc tctccggtgg ccatcttcac cagcgggggc ccggccagaa agaccttgga
     1141 ctgttccttg atgaagatcg tgtagtcgga cataccgggc tggtaggccc cgccggccgt
     1201 tgacgacccg aacaccacgc agatcgtggg gatggccaac ttggagagct cgatcatctc
     1261 gtagaaaaag cgaccggtct cggcgaagtg gtcggttctg gcccgccgcc cgccggagcc
     1321 gccgccagtc tggacccgta ggtcggcacc ggcggactcc acgaagctga cgtagggcat
     1381 ccggttgtgg cgggcgatct caatggcccg catccacttc ttggccatgt agggggtcat
     1441 ggcgccgccc agcactgtcg ggtcgtttcc gcagatgacg cactcgacgc cggcgatcac
     1501 gccgatcccc accacgaagc ccccgcccac cgtgtacgag gactcgtatc cggccagcgg
     1561 gctgatctcg aggaatgggc tgtcggggtc gactacatgg gctattcgtt ccctgatggg
     1621 catcttgtcc cgggagcgga ggcgggccat cgactcggga cccccaccgg cgtctgcctc
     1681 gtcgaggagt tcctcgatca cggccaggtg ctcttccatg tcagagcggt tctgggcgaa
     1741 ggcatcgctg cgggtgtcca gagtggacgc aagaggtggg gcgaggagcc ggtgaagcat
     1801 ggccgaaacc ttagggcagt aagaataaga gtgcaaagtt accgatctga ttacccgtac
     1861 ggggctgcgc ggatcaggag gggcattccc ggtgggatgc tcgtggcgtg ccgacccgat
     1921 atgagttcgc ccccattgtc gaggcctctg aggtggcggc tattcggggc gtcgtgatgt
     1981 gcgacgtgcg gtggtacctg gatggcagat cgggtcgcga tgcctacgac gccggccacc
     2041 tcccgggcgc cgtcttcgtc gacctcgacg aacacctgac ctcgacaccg ggttccgagg
     2101 taggtcgcca tccgctgccc acgcccgagg cgtttgctcg atcgatgaga gatctgggca
     2161 tcgggcggga cgacccggtg gttgcctacg acgatgccgg tgggatggcc gccggacgcc
     2221 tggtgtggat gctgcgtgta ctgggccgac ctgcagcgtt gctcgacggt ggcgtcgggg
     2281 cttgggatgg gccgctggag acctcgccga ccgtccgatc gccggtggtg atgccggtcg
     2341 aaccttggcc tgtcggtgca gtggccacca tcgacgaggt ggccactctg gcggcgtcgg
     2401 gaggggctga ggggatcgtg ctagacgctc gtggtgctga gcggtatcgg ggagagagtg
     2461 agccaatgga cccgcgggct gggcacgtcc caggggcgag gagcgcaccg tttgctgtga
     2521 acctcgaggt cgagggcccc cggaccggcc ggttccggtc acccgatgac ctggtctccc
     2581 ggtacgagga gatcggggtg gtggacgcca ccaacgtggt cgcctactgc ggatccgggg
     2641 tcagcgcgtg ccacgacctg ttggccatgg agcacgccgg gctgggacgg ggccgcctgt
     2701 tcgtggggtc ctggtcacag tggagccact cggaccggcc ggcggccgtc ggtccggaac
     2761 ctggatgagc ggcgagaagg cggcccaacg tctgacggtc accggttgat cagcatgcac
     2821 gacgcctaga ttctgtccat gaccgaccgc gagtggggtt tccggacccg ggcgctgcac
     2881 gctgggggac agcctgatcc gaccaccggg gcgcgggccg tgcccatcta ccagtccaca
     2941 agctttgtgt tcgacgacgc ggccgatgct gccgacctgt tcgccctcca gaagtacggg
     3001 acgatctact cgaggatgtc caacccgacc gttgcggcat tcgaggagcg catggccagc
     3061 ctggagggag gcatcggcgc ggtggcgact tcgtcgggtc aggccgccga gtttctcacc
     3121 gcagcggccc tcgctgaggc gggcaccaac ttcgtagctt cgtccgcgct gtacggcggc
     3181 acccacacca tgttcgacac caccctgggt cgattcggga tcgacgctcg tttcgtggac
     3241 ggcgacgacc ctgaagcctt cgccgcccgg atcgacgacg acacccgctt cctgtacacg
     3301 gagatcatcg gcaacccatc agggtcggtg gccgacgtgg cggcggtggc cgacgtggcc
     3361 catgcccacg acctgccgct ggtggtggat tccacgttcg ccactccgtg gttgtgtcgt
     3421 cccatagagc acggggccga catcgtcgtc cactcggcca ccaagttcat cggtggtcac
     3481 ggcacgtcaa tcggcggtgt ggtcgtcgag tcgggtcggt tcgattgggg gagcggccgc
     3541 ttcccgcaga tgactgaacc caacgccggg tacaacggcc tccggttctg ggagaatttc
     3601 ggcgagttcg ccttctgtac caagctgcgg gccgagcagc tccgtgacgt cggagcgtcc
     3661 ctgtcgccgt tcaacgcctt cctgctccta cagggtctcg aaaccctgcc ccaacggatg
     3721 gtcgagcacg tggccaacgc tcgggtcgtc gccgagttcc tggacggaca ccccgcagtc
     3781 tcgtgggtcg cctacccagg gttggctggc tctccgtatc gggccctggc cgatcgatac
     3841 ctgcccgatg gacccggtgc cgtgttcacg ttcggtattg ctgccgaggg aggtgccggc
     3901 cgggcggccg gagcggcttt catcgagcga ctgcagttgg tgagccacct cgccaacatt
     3961 ggcgacgccc gcacgctggt catccacccg gcgtcgacca cccaccagca actctccgag
     4021 gaggccatgg tcgccggtgg tgtgagttcc gacatggtgc ggctctctgt cggcctcgaa
     4081 gacgtcgacg acgtcctgtg ggaccttgac caggctctca ccggcggtgt ccagtgagcg
     4141 ggtggccggc catcgacggc tggaccccac catcggccgt cga
//
LOCUS       DASCMR010000042         4440 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000205821, whole genome shotgun sequence.
ACCESSION   DASCMR010000042 DASCMR010000000
VERSION     DASCMR010000042.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4440)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4440)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4440
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000205821"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1650
                     /locus_tag="QGG16_00945"
     CDS             <1..1650
                     /locus_tag="QGG16_00945"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005971 - ribonucleoside-diphosphate
                     reductase complex [Evidence IEA];
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_process: GO:0009265 - 2'-deoxyribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HJP23874.1"
                     /translation="LSKFAGGIGVAWHRIRSKGSLIRGTNGLSNGIIPWLKTLDSSVA
                     AVNQGGRRKGAACVYLESWHSDIEDFLDLKENTGDPQRRTHNLNLANWIPDLFMERVE
                     KDWQWSLFDPANVPHLTDLYGPDFESAYLKAEEAGIYERQIPARELYSRMMRSLAQTG
                     NGWMTFKDASNLKCNQTGTDGRVVHLSNLCTEILEVTDQDETAVCNLGSVNLGALVTD
                     GTFDFDRLAEVVRLAVPFLDRVIDINYYPTPEASTSNSAWRPVGMGLMGLQDVFFKLG
                     MPFDSDEARSLSSRISEEIYFNALWASTELAEASGAHENYGLTRAAKGDLQFDLWGVA
                     PSDTARWDTLRARITEHGLRNSLLIAIAPTATIASIAGCCECIEPQVSNLFKRETLSG
                     EFMQINRYLVRELQQRGLWNETMANRVKTAEGSIQDVEGMPDDLKDVYRTAWEVPMRS
                     LIDMAAARGAYIDQSQSLNLFMESPTIGKLSSMYLHAWKSGVKTTYYLRSRPATRINK
                     TTTGGPLDPTGGGEPAEKPTFSDEEAVACSLENPESCEACD"
     gene            1650..2729
                     /locus_tag="QGG16_00950"
     CDS             1650..2729
                     /locus_tag="QGG16_00950"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005971 - ribonucleoside-diphosphate
                     reductase complex [Evidence IEA];
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0009263 - deoxyribonucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HJP23875.1"
                     /translation="MALAEVPFDPAADPLEAPEAAPVTRRANILDPGFDLTLRPMRYP
                     VFYEMYRDAIKNTWTVEEIDFSDDIPDLDRKLVPAEKHLINRLVAFFATGDSIVSNNL
                     VLNLYQHINAPEARMYLSRQLYEEALHVQFYLTLLDNYIPDMAEREAAFTAIHSIPSI
                     AKKGEFCFKWMNAAENLGDLDTDEKRKTFLLNLICFAACIEGLFFFAAFAYVYFLRSK
                     GLLNGLAAGTNWVFRDESCHMNFAFEVISTVRREQPNLFDEDLSNRIYEMLDEAIECE
                     FQFAEDLLGQGVPGMSTADTKQYLQFVADQRLAQLGLDRRYNTTNPFGFMELQDVQEV
                     TNFFERTVAAYQVGVEGDVAFDEEF"
     gene            complement(2726..>4440)
                     /locus_tag="QGG16_00955"
     CDS             complement(2726..>4440)
                     /locus_tag="QGG16_00955"
                     /inference="COORDINATES: protein motif:HMM:NF017591.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF839 domain-containing protein"
                     /protein_id="HJP23876.1"
                     /translation="RLGRTDFTVNGRPSSTRRVRHLTGVREPVEMERRAFLWDGLRAG
                     AALGVTSGVWGAALPSALAGGPSAGLGSTPSSAFSPGPYGSLDGRTPDGHGLVLPEGF
                     TARIVAEGGAPVAGTDLVWPLFPDGKGTVSADDGGWLLVCNHEVFDFQTPNGPRGGAS
                     TIGFAPDGSISGAWPVLVGSHSNSRGAVTPWETWLSCQEAFGSAAGDGNGLVWECDPT
                     GGRPAVARLVLGRRTHGSVVVDLGGGHAYLTEAHRDGRLYRVALSDVGDPLSGAGDES
                     GRMEALAVDHDGGVSWLSVPDPAGSFLPTRLQALDGLVTPMGGGIQIHDGVLVFTTGL
                     DNQVHAVDLVAGHHSVVWDGSGGRRPLQGIGDLAVASSGDLFVSEDRGDMEVVMITPT
                     GEVAPFCRMVGNAHRFSAVTGPCFDPSGTRLYVSSLRGRGEALVRDVVPDLDWGTGAE
                     GRHVGVTYEISGPFRSEAVILGGQSTTTVVPASTTGAPSTTAANEDTATSPTVTTTVT
                     ASSTTGEPSGKVADGNPVESETTRSPRGDGGLVTPIGLGAALLALGGALALRRRRDRD
                     IDGS"
BASE COUNT          834 a         1552 c         1323 g          731 t
ORIGIN      
        1 ctctcgaagt tcgccggcgg catcggtgtg gcgtggcacc gcatccgctc caagggctcg
       61 ttgatccggg gcacgaacgg cctgtcaaac ggcatcattc cgtggctcaa gaccctcgac
      121 agttccgtcg ccgcggttaa ccagggaggt cgccgcaagg gcgcggcgtg cgtctacctc
      181 gagtcctggc actccgacat cgaggacttc ctcgacctca aggagaacac cggcgacccg
      241 cagcgtcgaa cccacaacct gaacctggcc aactggattc ccgacctgtt catggaacgg
      301 gtcgaaaagg actggcaatg gtcgctattt gacccagcaa atgttccaca cctcaccgac
      361 ctgtacggcc ccgacttcga gtccgcctac ctcaaggccg aggaagcagg catctacgag
      421 cgccagatcc cggcccgtga gctctacagc cggatgatgc gatcgctggc ccagaccggc
      481 aatggctgga tgaccttcaa ggacgcctcc aatctgaaat gcaaccagac gggcaccgac
      541 gggcgtgtcg tccatctgtc gaacctatgc accgagatcc tcgaggtcac cgaccaggac
      601 gagaccgcgg tgtgcaacct cggctcggtc aacctggggg ccctcgtgac cgatggaacc
      661 ttcgacttcg accgtctggc cgaggtggtt cgcctggcag tgccgttcct cgaccgggtc
      721 atcgacatca actactaccc gacccccgag gcatcgacgt cgaactcggc gtggcgaccg
      781 gtcggcatgg gtctcatggg cctccaggac gtcttcttca agctcggtat gccgttcgac
      841 tcggacgagg cccgctccct gtcgtcacgg atctccgagg agatctactt caacgccctt
      901 tgggcgtcga cggaactcgc cgaggcctcc ggcgcacacg agaactacgg gctgacccgg
      961 gccgccaagg gcgacctgca gttcgacctg tggggcgtcg caccgtccga caccgcccgt
     1021 tgggacaccc tcagggcccg gataaccgag cacggccttc gcaactcgct cctcatcgcc
     1081 atcgcaccga cggccaccat cgcctcaatc gccggctgct gcgagtgcat cgaaccccaa
     1141 gtctccaacc tattcaagcg cgagaccctg tcgggggagt tcatgcagat caaccgctat
     1201 ctggtgcgcg agcttcagca gcggggcctg tggaacgaga ccatggccaa ccgggtgaag
     1261 acggcggagg gctccatcca ggacgtcgag ggcatgcccg atgacctcaa agacgtctat
     1321 cgcaccgcct gggaggtacc catgcgatcg ctgatcgaca tggctgctgc ccggggtgcc
     1381 tacatcgacc agagccagtc gttaaacctg ttcatggagt caccgaccat cggcaagctc
     1441 agctccatgt acctccatgc ttggaagtct ggagtgaaga ccacctacta cctgcggtcc
     1501 cgaccggcca cccggatcaa caagacgacc accggcggac ccctggatcc aaccggcggt
     1561 ggtgaaccgg ccgagaagcc caccttctcc gacgaggagg ccgtggcctg ctctttggag
     1621 aaccccgagt cctgtgaggc gtgcgactaa tggctctcgc agaagttccc ttcgacccgg
     1681 ctgctgatcc cctagaggcc ccggaggccg ctccggtcac gcgccgggcc aacatcttgg
     1741 accccggttt cgatctgacg ctgcggccca tgcgttaccc ggtgttctac gagatgtacc
     1801 gggacgccat caagaacacc tggacagtcg aggagatcga cttctccgac gacatccccg
     1861 acctggaccg caagctcgtc ccggccgaga agcacctcat caaccggttg gtggccttct
     1921 tcgccacggg cgactcgatc gtctccaaca acctggtgct caacctgtac cagcacatca
     1981 acgcccccga ggcccggatg tacctgtcgc gccagctcta cgaagaggcg ctgcacgtcc
     2041 agttctacct gaccctgttg gacaactaca tacccgatat ggctgagcgg gaggccgcct
     2101 tcacggcgat tcacagcatc ccgtcgatcg ccaagaaggg cgagttctgc tttaagtgga
     2161 tgaacgctgc cgaaaacctc ggcgacctcg acaccgacga gaaacgcaag acgtttctac
     2221 tgaatctcat ctgcttcgcc gcctgtatcg aggggctgtt cttttttgct gcctttgcct
     2281 acgtgtactt cctccgctct aaaggcctgc tcaacggcct ggccgccggc accaactggg
     2341 tgttccgtga cgagagctgc cacatgaact ttgccttcga ggtcatcagc acggttcgcc
     2401 gtgaacaacc caacctgttc gacgaggacc tcagcaaccg catctacgag atgctcgacg
     2461 aggccatcga gtgcgagttc cagttcgctg aggatctcct cggccagggc gtgcccggca
     2521 tgtcgaccgc cgacacgaag cagtacctgc agttcgtagc tgaccagcgc ctcgcccagt
     2581 tgggcctgga tcgccgctac aacaccacca atccgttcgg gttcatggag ctccaagacg
     2641 tacaggaggt cacgaacttc ttcgaacgca ctgtggccgc ctaccaggtg ggcgtcgagg
     2701 gcgacgtggc gttcgacgag gagttctaac tcccgtcgat atctcggtcc cgccgtctgc
     2761 gaagggctag ggcgccgcca agagcgagta acgccgcacc cagaccgatc ggcgttacca
     2821 acccaccgtc cccacgggga cttctggtgg tttcactctc gacagggttg ccgtcagcaa
     2881 cttttccaga gggctcgccg gtcgtcgacg aggcggtgac ggtggtagtg acggtcggac
     2941 tcgtagcggt gtcctcgttg gccgctgtcg tagatggtgc accagtcgtc gacgccggga
     3001 ccaccgtcgt ggtcgactga cctccgagaa tcacggcctc tgagcggaag gggccactga
     3061 tctcgtaggt cacgccgacg tggcgtcctt ctgccccggt gccccaatcc agatcgggca
     3121 ccacgtcacg caccaaggcc tcgccccggc ctcgtaacga gctgacgtac agccgggtac
     3181 ctgacgggtc gaagcacggt ccggtgaccg ccgagaaccg gtgggcgttg ccgaccattc
     3241 ggcagaacgg cgccacctcc ccggtcggcg tgatcatcac gacctccatg tcgcctcggt
     3301 cctcggacac gaatagatcg ccggaggaag ccaccgcaag gtcgccgatt ccttgcaacg
     3361 gacgacgtcc tcccgaaccg tcccacacca ccgagtggtg gccggccacc aggtccaccg
     3421 cgtggacctg gttgtcgagc ccggtggtga acaccagcac cccatcgtgg atctggatgc
     3481 caccgcccat cggtgtgacc aggccgtcga gcgcctgaag ccgggtcggg aggaacgacc
     3541 cagcggggtc gggaaccgac aaccaactga ccccaccgtc gtggtccacg gctagggcct
     3601 ccatccgccc ggactcgtcg cccgctccgc tcaacgggtc gccgacatcg gagagggcca
     3661 cccgatagag acgaccgtcc cgatgggctt cggtcaggta ggcatgcccc ccgccgagat
     3721 ccacgaccac cgatccgtgg gtccgacgtc ccaacaccag gcgggccacc gctggtcgcc
     3781 caccggttgg gtcacattcc cagacgaggc cgttgccgtc gcccgccgcc gagccgaacg
     3841 cctcctgaca ggagagccac gtttcccacg gggtgaccgc cccacggctg ttggagtggc
     3901 tcccgacgag gacgggccag gcgccactga tcgacccgtc gggagcgaac ccgatggtcg
     3961 aggccccgcc acgaggtcca tttggtgtct ggaagtcgaa tacctcgtgg ttgcagacga
     4021 ggagccatcc cccgtcgtca gccgacaccg tgcccttgcc gtcgggaaac agcggccaga
     4081 cgagatcggt gccggccacc ggtgctccgc cttcggcgac gatccgggca gtaaatccct
     4141 cgggcagcac aaggccatga ccatcagggg tccgaccgtc cagcgatccg taggggcccg
     4201 gcgaaaacgc cgacgaaggc gtcgacccca gcccggcgct cggaccgccg gccagtgcac
     4261 tcgggagggc cgccccccac acaccgctgg tcacaccgag cgcagctccg gcccggaggc
     4321 cgtcccacag gaacgcccgc cgttccatct ccaccggttc ccggacgccc gtcaggtgcc
     4381 gaacgcgtcg agtagacgaa gggcggccgt tgacggtgaa gtccgtccgc ccaagacgtc
//
LOCUS       DASCMR010000043         2225 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000206369, whole genome shotgun sequence.
ACCESSION   DASCMR010000043 DASCMR010000000
VERSION     DASCMR010000043.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2225)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2225)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2225
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000206369"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..250)
                     /locus_tag="QGG16_00960"
     CDS             complement(<1..250)
                     /locus_tag="QGG16_00960"
                     /inference="COORDINATES: protein motif:HMM:NF014564.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HJP23877.1"
                     /translation="MSDLSGGVPMRPLDGVRVVDAATILAGPFAASVLGEFGADVIKV
                     EQPTVGDPMRRLGTVGPDGDTWWWLSDTRNKESVELDLR"
     gene            complement(247..1497)
                     /locus_tag="QGG16_00965"
     CDS             complement(247..1497)
                     /locus_tag="QGG16_00965"
                     /inference="COORDINATES: protein motif:HMM:NF012296.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HJP23878.1"
                     /translation="MTAVTLPDLADPATYDRGIPHGAFADLRATSGLVRNPDGPWGSG
                     FWSVTRLDDLVSVSRDPQTFSSAVGHIQIYDVDEDVIDARASMIDLDPPIHTRLRRLV
                     SSAFTPKHVQNYVGDVRRRIGERVDALEAAGGGDWVAEVAAPIPIGVICALMGVPEAD
                     QDLMIEMTDHLVEGTSSAELDPGAYGNTRPLRELPFNSPAAFGVEEYARRARRDRLAN
                     PTDDLLTQLAHAEVDGERLSETEYARFFQLMIFAGNETTRSAMAHLALHLADHAGQFD
                     RVRSDEGLLEGAAEEVVRHASPILYFRRTATVDTVLAGTEVRAGDKVVMWYASANFDE
                     AHFDDPLDFEVGRPRVPGHVAFGGGGAHFCLGASLARIELVELVAEVMRRDLSMRVVG
                     EPEMVSSNFVNGIQSLTVELLDAR"
     gene            complement(1494..>2225)
                     /locus_tag="QGG16_00970"
     CDS             complement(1494..>2225)
                     /locus_tag="QGG16_00970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23879.1"
                     /translation="EEVGRLEEAEWFGHCALEVDPVDVWALHALAHVYETRNLQEEAV
                     AFLRETRPGWIERDHLALHLEWHLALRLLAGGAFDECLALVDGRLATTDRAFGLTDLT
                     SLLWRLELAGCEVGDRWPELTSKWRRHNQLHTTGFLDLHAALAFAACPDDPGAEAFWV
                     GLDSCHRDETSENARTFDEVVRPLAVAIRDHRSGRHTEASDVFRKLAGSIHRVGGSHA
                     QRDLFVRTADASQNLAEPSITESPS"
BASE COUNT          423 a          744 c          693 g          365 t
ORIGIN      
        1 tccgcaagtc aagctcgacg ctctccttgt tgcgggtatc gctcagccac caccaagtat
       61 cgccatcggg gcccactgtg ccaaggcgcc gcatggggtc acccacggtg ggttgctcga
      121 ctttgatgac gtcggcaccg aactcgccga gcactgaagc cgcgaacggc ccggccagga
      181 tggtcgccgc atcgaccacg cgaaccccgt ccagcggtcg catcggaaca ccgcccgaca
      241 gatcgctcac cgggcgtcca gcaactcgac ggtaaggctc tggatcccgt tcacgaagtt
      301 ggatgacacc atctccggct cgccgaccac ccgcattgac aggtcgcgcc gcattacctc
      361 ggctaccagc tcgaccaact cgatccgggc aagcgacgca ccgaggcaga agtgggcccc
      421 accaccaccg aaggccacgt gcccgggtac ccggggccta ccaacctcga agtccagcgg
      481 gtcgtcaaag tgagcctcgt cgaagttggc gctggcatac cacatgacca ctttgtcccc
      541 agcccggacc tcggtgccgg cgaggacggt gtcaacagtg gctgtacgcc ggaagtagag
      601 aatcggtgaa gcgtggcgaa ccacttcctc ggccgctccc tctaaaaggc cctcatcgct
      661 ccgcacgcgg tcgaactggc cggcatggtc cgccaggtgg agggcgagat gggccatagc
      721 agaccgggtt gtctcgtttc cggcgaagat catcaattgg aagaaccggg cgtactcggt
      781 ctcgctcagt cgctcaccgt cgacctccgc atgtgccagc tgggtgagta ggtcgtcggt
      841 ggggttggcc agacggtcgc gccgcgcgcg acgggcgtac tcctcgacac cgaacgccgc
      901 tggactattg aatggcaact cgcgcaacgg cctggtgttg ccgtacgcac ctggatccaa
      961 ctcggctgac gacgtcccct ccactaggtg gtccgtcatc tcgatcatca ggtcttggtc
     1021 ggcctcgggc actcccataa gcgcacagat caccccgata ggaatcggtg cggcgacctc
     1081 agccacccag tccccaccac cggcggcctc cagggcgtcg acacgctcgc cgatccggcg
     1141 cctcacgtcg ccgacgtagt tctggacgtg ttttggagtg aatgccgaac tgacgaggcg
     1201 tcgtaaccgg gtgtggatgg gagggtcaag gtcaatcatc gaggcccgag cgtcgatgac
     1261 gtcctcgtcc acgtcgtaga tctgaatgtg gccgaccgcc gatgaaaaag tctgtggatc
     1321 gcgagacacc gagacgaggt cgtcgaggcg ggtcaccgac cagaagcccg atccccacgg
     1381 tccgtccggg ttgcgtacga ggccggaagt ggctcgcagg tcggcaaatg ccccgtgggg
     1441 gatgccgcgg tcgtaggttg ccggatcggc cagatccgga agggtcaccg cggtcatgat
     1501 ggactctccg ttatcgaagg ttctgcgaga ttctgggagg catcggccgt tcgaacgaac
     1561 aggtcgcgct gggcgtggct cccacccacc cggtggatgg acccagccaa cttcctaaag
     1621 acatcggatg cctcggtatg acgcccgctc cgatggtcac gaatcgccac agccagcggc
     1681 ctaaccactt cgtcgaaggt cctggcgttc tccgaagttt cgtcacggtg gcagctgtcc
     1741 aagccgaccc agaacgcctc ggctcccggg tcatcaggac aggccgcgaa ggcaagagcg
     1801 gcatggaggt ccaaaaagcc ggtggtgtgc aactgattgt gcctccgcca cttcgaggtt
     1861 agttctggcc accggtcgcc cacctcgcac cccgccaact cgagacgcca gagcagcgac
     1921 gtgaggtcag tcaggccgaa ggcccggtct gtggtggcca gccggccatc aacgagggca
     1981 aggcactcgt cgaatgcgcc accggccagc agacggaggg ctaggtgcca ttccaggtgg
     2041 agcgccaagt ggtcccgctc gatccagccg ggcctggtct cccgcaagaa agccacagcc
     2101 tcctcctgaa ggttgcgggt ctcgtacacg tgagcgagcg catgaagtgc ccaaacatcg
     2161 accgggtcga cctctagcgc gcaatggcca aaccactcgg cctcctcgag gcggccgacc
     2221 tcctc
//
LOCUS       DASCMR010000044        13976 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000211224, whole genome shotgun sequence.
ACCESSION   DASCMR010000044 DASCMR010000000
VERSION     DASCMR010000044.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 13976)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13976)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13976
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000211224"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1602
                     /locus_tag="QGG16_00975"
     CDS             <1..1602
                     /locus_tag="QGG16_00975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23880.1"
                     /translation="PLARMLGTGATTMEEGTVLVVASGILDGRLPHADVSYLYAPGSV
                     WTVAGAFSVFGTSVVVERLVGLGYRLLLLWGIHRLARRWGLSTAACTTLATWAVLAPF
                     GLIAYPWVAGLGLLAAGTALVLDGEDRRTAAVGASLCGLAAFHQVVLAPAVLLVVVPA
                     FLSATDERRARLGTGLVAGLFPFLLHMVLVGPRVMFEGMVLDPVVRLRAGRRLPLPPD
                     PNDSGDFFARLDDLVRGPSRFPGLDRPAQITALFWLLLASTVVLLVMAWRWRGSARSR
                     LTTMAVVGAALVPMVLQRPSPNHLKFVGAWTVAVGVVAIAEPLGALLGRLPGRFSGMR
                     LGRSARHLAPPIALAAILGGLALLAPHHIGRFTIDAFTDRPLDGSTATVVHDGRTLPV
                     GRGSGAEAVADEIDRLVGLVDALTRPGDRLFVGPADLTRTNYSDTSLYFLLPDLVPAS
                     RHIEMNPGLANRQGSGLAADLAAADVLVLTDRFDGWSEPNASVFPGDPAPAAVVADRF
                     CDVGGTATWRVLTPCGLPGVDPADR"
     gene            1615..3831
                     /locus_tag="QGG16_00980"
     CDS             1615..3831
                     /locus_tag="QGG16_00980"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HJP23881.1"
                     /translation="MAADGARPRFSYIPGLDGIRGIWVVIGPLLYHAATDTVTGGILG
                     IDLFFTLSSYLIISIALNEFESTGHIDLKAYAGRRARRLLPALFVALGLLTIYLVLVV
                     PPGEFARWTGAIFSTLTYSANWYEIFSDVSYFEDFQHSPLRHVWSFSIEEQFYIFAPL
                     YLTAVLVLFKRRANLALLVTMIAGTAASTWWMGHLYPGHGDPSRVYYGTDTRAHSLFA
                     GIILAVAVRMYGPVRSRAGQLAWVASAYAATIFFTWAIFEISERDAWMFEHGGFLLVA
                     GISCLMIYGVAQPGEAPWHRGLPPFLSADDAPWAGRLACGALYAGLFTAGWAVVSVAR
                     GNTAFDHWPYLLGVGVGWFWYGAARAQVGPLHWFLESTLIRWVGKISYGLYLYHWPIY
                     LLVTPARAGRLIPGVAVVEGNNLVWIHLAITFGTAAASFYLVEQPVMKRRFPFVNRKM
                     TAVSGTAAGATAVVLILIGLLWVNTRPAEGGAFAPSTSPCVEQGLLPPPSDGQLRVLV
                     VGDSVALQIGEALCGWALEHPGRMVVLNESHLGCVVGRHGLKRIPEGDEGPVGEICSA
                     WNESVPTHVMLDSEVVSWPSAVAAFQPDVVLGHVTAWDVTDRLVPSLGDEWVWVGVPA
                     YDDYISAEYRLGSEVLGAAGAHVYWLEGAHIRREIRPQNHPDRIDGLNDLVRSATADL
                     DFVTLVPYREFTGLNGTAREREIRDDGVHLSETGMAQVAEWLTSDVFDETREVVTD"
     gene            complement(3875..4690)
                     /locus_tag="QGG16_00985"
     CDS             complement(3875..4690)
                     /locus_tag="QGG16_00985"
                     /inference="COORDINATES: protein motif:HMM:TIGR00277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HDIG domain-containing protein"
                     /protein_id="HJP23882.1"
                     /translation="MTETARQDASSDGFAVDPSTGERLSAILLEDDCVPGLWASVDSG
                     EMDDLVPELAALRMEQDPIHRHKDVLSHTIAVVAKTEPDLTVRLAALFHDIAKPRTRS
                     FEHGGVTFRHHEVVGARMARRRLAAMGYSELVIDEVAEMVRLSGRFKGYADGWSDAAV
                     RRYARDAGPLLGRLNHLIRCDCTTRNKARAAGIQALMDDLEFRIAELAEQARVAAERP
                     GMDGAAVMAHLGIGPGREIGEALAFLLALKRSEGEMEQSEMEARLDVWWSERS"
     gene            complement(4726..5979)
                     /locus_tag="QGG16_00990"
     CDS             complement(4726..5979)
                     /locus_tag="QGG16_00990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJP23883.1"
                     /translation="MNPLSENLPSENGITEIPPIISVDDHIVEPPHLWQAWLPAKYRD
                     RGPRVERRRLGDMTWVGGAKMYEYELDAPDAPWCDIWFYEDLVHPNKRHVAAVGFDRD
                     EMTMAPITYDEMRPGCYDPKARVEDMKVNHVEASLSFPTLPRFCGQTFYEASDHDLGL
                     ACVQAYNDYMVEEWCGDSDGALIPLIIIPLWDAGLAAAEVRRNAERGCHAVCFSEIAP
                     NLGLPSIHTGYWDPFFEACQDTQTTVNMHIGSSSKMPAASPDAPPAVAASLSFNNAIA
                     SMSDFLFSGVLVRFPELKLAYSEGQIGWIPYILERADDVWKEHRAWGGVADIIPEPPS
                     TYYYRQMFGCFFRDNHGLRSLDEVGVDNITFETDYPHTDTTWPHTKQVATDMMGHLPA
                     DVVWKIVRGNAARMLSLDIEPCPTV"
     gene            6098..6904
                     /locus_tag="QGG16_00995"
     CDS             6098..6904
                     /locus_tag="QGG16_00995"
                     /inference="COORDINATES: protein motif:HMM:NF012596.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HJP23884.1"
                     /translation="MDDRTSDGPYGEAATYRRDDHVATITYHRPEAANTVNGAMRRDL
                     NGAWDRFMADEEAWVAVLTGAGDRHFCGGADLRDPAGSTGDFTGTFWETPTINSFESG
                     LEVFKPTIAAVNGACVGYGLTAVVACDFVVASERATFSWPEVSIGIPTIVGAIRLPRK
                     VAWADAMELLLTGEPIDAQRALDIGLVWRVVPHDELMAEARTLADRLCRAAPLAARTT
                     KEVAVRTRDMGWTEAVRFGETMRRVAGATADATEGRTAWAEKRPPEWEGR"
     gene            6990..7859
                     /locus_tag="QGG16_01000"
     CDS             6990..7859
                     /locus_tag="QGG16_01000"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020376814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HJP23885.1"
                     /translation="MKVGIAFANIGPFGSAEGAAAVGAAAEAAGIDSLWTVEHVVYPD
                     EYGSTYPYDDSGRMAMAPDTDLTDPLTWLTWVGAHTSTLRLATGILILPERNPVVLAK
                     QLGTMDALTGGRVDLGIGVGWLREEFDALGIPWERRGARTDEYVAAMRTLWSGNSVSF
                     DGDFVSFSGVSSNPKPVNGSVPIVIGGHSDAAARRAGRLGDGFWPGKGDLDHLLDIMR
                     HEAEAHDRDPDAIEVTWAGDLTAGEDPVAAAAALADKGVSRVIVPSFLFWRDPEGSLA
                     AFGESVVAPLADL"
     gene            8122..8886
                     /locus_tag="QGG16_01005"
     CDS             8122..8886
                     /locus_tag="QGG16_01005"
                     /inference="COORDINATES: protein motif:HMM:NF012894.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HJP23886.1"
                     /translation="MIVVAFFAVILLGSDEPASEQATEQDLTATVQGAMVQAGLPTVE
                     VRVVDWTVILEGRVATSDLREAAERVAFAQADVISVQNRLFVPPPIDDLVPVSTTVPD
                     LPASLADLVLQARLSAVAAHPPIQFESGGDRITLESVPTLDRLGAFLLFEPAIRVQII
                     GHTDSDERSPGDNLHLSAVRADAVRTQLLARGVEPDRLVTLGMGHADPIADNLTKSGK
                     AANRRIEFLLLRPGEVGLPPPPDPGIPDPGTDDEGK"
     gene            8953..9129
                     /locus_tag="QGG16_01010"
     CDS             8953..9129
                     /locus_tag="QGG16_01010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23887.1"
                     /translation="MKTIQRQDVRNRVTGLCTRCHRTGAVEVVGLVCDRFGASAQPTG
                     VCTTCSTRRTVLRS"
     gene            9161..10060
                     /locus_tag="QGG16_01015"
     CDS             9161..10060
                     /locus_tag="QGG16_01015"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021509.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygenase MpaB family protein"
                     /protein_id="HJP23888.1"
                     /translation="MSIWRARVTEAAVGLFSHAPDPLASTFDHPGDPGLFGPGSVTWR
                     VMCDCSTFIGGVRALIVQAAHPEVASGVGDHSSYRTDPLGRLSRTASYVTATAYGSLP
                     EVDHAVGIVSRLHGPVSGNSHRGLAYSAADPEMKAWVHNALVDSFLVAHRTFGPEAMA
                     DADADAYVAEQVRLGVRMGASPLPDTADALTGWLLEHPSLGPSPAGADAVRFLAGPPL
                     NAPVRLAYRIIHDAAAATIPTPVLDVLGIRRRPGAVLRGRLLIRALRAALGASPAWAA
                     ALERCGQPRPDGVRFRNDPGTSC"
     gene            complement(10110..11444)
                     /locus_tag="QGG16_01020"
     CDS             complement(10110..11444)
                     /locus_tag="QGG16_01020"
                     /inference="COORDINATES: protein motif:HMM:NF012296.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HJP23889.1"
                     /translation="MASPADQTLSAPTLSDIDLTNPDVFAERMPHDWFDLLRREAPVW
                     QHPPTDEHPEPFWVVSSFEHISEAHRSGTLFSHQTGPGRDGAGGIALNDIADGRGPGL
                     QMVMTDPPQHTRYRKLVNTGFTPRMVRRMEEVMRLRTNIILDRICEQGSADFVLDVAA
                     ELPLMAIADIIGVPDEDREQLLDWSNRTIGGSDPEYQDEPTGDEDSDHSTTYESAMIE
                     MAFYAHGLTDQKRAQPEDDLWTVLTSATVTLDDGTVTELTDLERDLFFTLLLVAGNET
                     TRNAISLGLMGFMDHPDQWATVVETGEMTDDAVDEILRYTSPVNYFRRTATADTELGG
                     QQIRAGDKVTLWYPSGNRDEKVYDDPHRLDLTRTDNHHLAFGGGGAHFCLGANLAKLE
                     LKLIFEGLAARLPDITITGPADRLRMNFVNGIKHLPVEFTPSQPVLTTSSAG"
     gene            11525..12082
                     /locus_tag="QGG16_01025"
     CDS             11525..12082
                     /locus_tag="QGG16_01025"
                     /inference="COORDINATES: protein motif:HMM:NF024854.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HJP23890.1"
                     /translation="MGGPADQTEQLDLVEQAVDRLVPEGDAAHSARSATTAGILVWAY
                     LAGRELEVWMADALGPTGLTTSEFGALAGVAFAGEHTLTAGDLARWTVQTSGGTTKTI
                     QRLVDRGLVVRAADPGDGRRTLIDATTEGRSLATAVVADLVVRLDRDLGPLNAVARDD
                     LHDGLRRLSAALGWQADAQTMADSG"
     gene            complement(12219..13337)
                     /locus_tag="QGG16_01030"
     CDS             complement(12219..13337)
                     /locus_tag="QGG16_01030"
                     /inference="COORDINATES: protein motif:HMM:NF024771.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HJP23891.1"
                     /translation="MKIVAVDVFQHDLPVRGPVDGEPYRMAVQDVWHLDTTIVRLQCD
                     DGTVGYGETCPLGSTYQPQHALGARAALAEMAPHLVGLAPTAIGRVGAAMDAALMGHR
                     YAKAAVDVACWDATGKAYGVRVCDLLGGAVRERVPSYHGVLIASPEDSAADADARQTE
                     GFSRIQLKVGGRPVEDDIAALRAVAATLRPGVRLAADANKGWTTRDAIQVSNACRDIA
                     LVIEQPCDSYEENASLVGKVCHPIYLDESATDLGAVVAAIGQRVADGFGMKVSRVGGI
                     SAMRAVRDVCAAARRPHTVDDTWGGDLVAAASLHVGATVDPANFEGTWIAEPYVDGHY
                     DVEHGIRLDGGWIDLPPGPGLGITPDESLWGDPVLSFS"
     gene            complement(13585..13842)
                     /locus_tag="QGG16_01035"
     CDS             complement(13585..13842)
                     /locus_tag="QGG16_01035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23892.1"
                     /translation="MIGSDESDDAALSLLLSLLLSLLLSLLLLLSLEEAALSPPLDAA
                     SSLSDPQADATIASAARMTMNRFNMKRFPSVWLRGSSTAPH"
BASE COUNT         2126 a         4859 c         4601 g         2390 t
ORIGIN      
        1 ccactggccc gcatgctggg cacgggcgcc accaccatgg aggagggcac cgtcctcgtc
       61 gtggcgtccg ggatcctcga cggtcgacta ccccatgccg acgtgtcgta cctctatgcc
      121 ccaggcagcg tctggacggt ggcgggcgcc ttctcggtgt tcggcacctc ggtggtcgtc
      181 gagcgcctgg tcggcctcgg ctaccgcctc ctcttgctgt ggggcatcca ccgactggcc
      241 cgccgctggg gactgtcgac cgcggcatgc accacgctgg ccacctgggc cgtgttggcc
      301 ccgttcggcc tcattgccta cccgtgggtg gccggcctcg gcctactggc tgccggtacc
      361 gcactggtgc tggacggcga ggaccgccgc accgcagcgg taggcgccag cctgtgcgga
      421 ctcgccgcgt tccatcaggt cgtgctggcc cccgccgtac tgctcgtggt ggttcccgca
      481 ttcctttcgg ccaccgacga acgccgggcc cgcctgggca ccggtctggt ggctggcctc
      541 ttccccttcc tcctccacat ggtgctggtc ggaccccgcg tcatgttcga gggcatggtg
      601 ctcgacccgg tggtgcggct ccgggccgga cgacgcctac cgctgcctcc ggatccgaat
      661 gacagcggcg acttcttcgc ccgcctcgac gacctggtgc gtggcccgtc gcgtttcccg
      721 ggcctggacc gacccgccca gatcaccgct ctgttctggc tcctgctggc ctccacggtg
      781 gtcctcttgg tgatggcgtg gcgctggcgg ggctcggccc ggtcacgcct gaccaccatg
      841 gcggtggtcg gcgcggcgct cgtccccatg gtgttgcagc ggcccagccc caaccacctc
      901 aagttcgtcg gagcgtggac ggtggccgtc ggcgtggtgg ccatcgccga accactggga
      961 gccctgctgg gtcgcctccc tgggcgcttc tcgggtatgc gcctcggccg ttcggcccgc
     1021 cacctggccc caccgatcgc tctggccgcc atcctgggcg gactggccct gctagccccc
     1081 caccacatcg gccgcttcac catcgacgcc ttcactgacc gacctctgga tggttccacg
     1141 gcgaccgtgg tccacgacgg ccgcaccctg cctgtgggcc gggggtcggg ggccgaggcg
     1201 gtggccgatg agatcgaccg actggtgggc ctcgtcgatg cgctgacccg tcccggcgat
     1261 cggttgttcg tcggtcccgc ggacctgacc cggaccaact acagcgacac ctccctctac
     1321 ttcctgctcc ccgacctggt gccggccagc cgccacatcg agatgaaccc cggtctggcc
     1381 aaccgtcaag ggagtgggct ggccgccgac ctggccgccg ccgacgtact ggtcctcacc
     1441 gaccgcttcg acggctggtc cgaacccaac gcctcggtgt ttcccggcga cccggcaccc
     1501 gccgcagtgg ttgccgaccg tttctgcgac gtcggcggta ccgctacgtg gcgggtcctc
     1561 accccgtgtg gattgccggg tgtcgacccg gccgaccgat agcgtcagcg ccgcatggcc
     1621 gccgacgggg cacgccctcg cttctcctac atcccgggcc tcgacggcat ccggggcatc
     1681 tgggtcgtca tcggcccgct gctgtaccac gccgccaccg acacggtcac cggcggcatc
     1741 ctgggcatcg acctgttctt cacactgtcc agttacctga tcatctccat cgccctgaac
     1801 gagttcgagt ccacgggtca catcgacctg aaggcttacg ccggtaggcg ggcccgccgg
     1861 ctgctcccag ccctgttcgt ggccctcggg ctgctcacca tctacctggt actcgtcgtc
     1921 ccaccgggcg agttcgcccg ttggaccggg gcgatcttct cgacgctgac ctacagcgcc
     1981 aactggtacg agatcttctc cgacgtctcg tatttcgagg acttccagca ctccccgctt
     2041 cgccacgtgt ggtcgttctc gatcgaagag cagttctaca tcttcgcccc gctgtacctc
     2101 accgccgtcc tggtcctgtt caagcgacga gccaacctgg ccctgctggt caccatgatc
     2161 gccggcacgg cggcctccac ctggtggatg ggccacctct atccggggca cggagacccg
     2221 tcacgggtgt actacggcac cgacacccgg gctcactccc tgttcgccgg gatcatcctc
     2281 gccgtggccg tccggatgta cggaccggtg cgaagccggg ccggccagct ggcctgggtg
     2341 gccagcgcgt acgcggcgac catcttcttc acgtgggcca tcttcgagat ctccgagcgg
     2401 gatgcctgga tgtttgagca cggcggcttc ctcctggtag caggcatctc gtgtttgatg
     2461 atctacgggg tggcccagcc cggtgaagcg ccgtggcacc gcggccttcc ccccttcctg
     2521 tcagccgacg acgccccgtg ggccggccgc ctcgcgtgtg gcgccctcta cgccggcctg
     2581 ttcaccgccg gttgggcggt ggtcagcgtg gcccggggca acacggcgtt cgaccattgg
     2641 ccatacctcc ttggcgtggg cgtcggctgg ttctggtacg gggcggcgcg agcccaggtc
     2701 ggcccgctgc actggttcct ggagtcgacg ctcatccgct gggtggggaa gatcagctac
     2761 gggctctatc tgtaccactg gccgatctac ctgctggtca caccggcccg cgccggacgc
     2821 ctcatacccg gggtggccgt cgtggaaggc aacaacctgg tctggataca cctggccatc
     2881 accttcggca cggcggcagc cagcttctac ctcgtcgagc agccggtcat gaagcgtcgt
     2941 ttcccgttcg tgaaccggaa gatgaccgct gtaagcggca cggcggccgg cgccacggcc
     3001 gtggtgctca tcctcatcgg cctcctgtgg gttaacaccc gtccggccga gggcggcgcc
     3061 ttcgccccgt cgaccagccc gtgtgtcgaa cagggactgc tcccgccgcc gagcgacggc
     3121 cagctccggg tgctggtggt gggtgactcg gtcgccctcc agatcggcga ggccctctgc
     3181 ggctgggccc tcgaacaccc gggccgcatg gtggtcctca acgagtccca tttgggttgc
     3241 gtggtcggtc gccacggcct gaagcggatt cccgaggggg acgagggtcc ggtgggcgag
     3301 atctgctcgg cgtggaacga gtcggtgccc acccacgtga tgctcgactc cgaggtggtc
     3361 tcgtggcctt cggccgtggc cgccttccaa cccgacgtgg tgcttggcca tgtcacggcg
     3421 tgggacgtca ccgaccggtt ggtgccgtca ctgggcgacg aatgggtatg ggtcggggtt
     3481 ccggcctacg acgactacat ctccgccgag taccgcttgg gcagcgaggt gctcggagcc
     3541 gcgggcgccc acgtgtactg gctggagggc gcccacatcc gccgcgagat tcgaccccag
     3601 aaccacccgg accgaatcga cgggctaaac gacctagtcc gttcggccac cgctgatctc
     3661 gacttcgtga ccttggtgcc ctaccgggag ttcactgggc tgaacggcac agcgcgcgaa
     3721 cgcgagatcc gcgacgacgg ggtgcacctg tcggaaaccg gcatggccca ggtggccgaa
     3781 tggctcacct ctgacgtgtt tgacgagacc cgcgaggtcg tcaccgactg acgggacggc
     3841 cggtccccgg tcgctctgga ccgggtttcg tcaatcagga acgctcgctc caccaaacgt
     3901 cgaggcgggc ctccatctct gactgttcca tttctccctc ggaccgcttg agggccagta
     3961 ggaaggccag cgcctcaccg atctcgcgcc ctggcccgat gcccaggtgt gccatcaccg
     4021 ccgcgccgtc catgcctggc cgctcggcgg ccacccgtgc ctgttcggcc agttcggcga
     4081 tccggaactc caggtcgtcc atgagggcct ggatgccggc cgccctggcc ttgttgcggg
     4141 tcgtgcagtc acagcggatg aggtggttga gtcgccccag caatggaccg gcatcgcggg
     4201 cgtagcgtcg gaccgcggca tccgaccagc cgtcggcgta gcccttgaag cggcccgaga
     4261 gccgaaccat ctcagccacc tcgtcgatca ccagttcgga atatcccatg gcggcgagac
     4321 ggcgacgagc catacgggcc cccaccacct cgtggtgacg gaaggtcacc ccgccatgtt
     4381 cgaagctgcg agtccgcggc tttgcaatgt cgtgaaacaa cgcggcgagg cgcacggtga
     4441 gatcgggctc ggtcttggcc accacggcga tggtgtggct gaggacgtcc ttgtgccgat
     4501 ggatgggatc ctgctccatt cggagggccg ccaactcggg caccaggtcg tccatctcgc
     4561 ccgagtccac cgaggcccag agaccgggca cgcaatcgtc ctccagcagg atggcgctga
     4621 ggcgctcccc ggtggacggg tccacagcga acccgtcgct ggacgcgtcc tgtctggccg
     4681 tctcagtcat ggaacgagtc tacgaaggac ccagttcagc tgccctcaga cggtggggca
     4741 gggctcgatg tcgagactca gcatgcgggc ggcgttgccc cgcacgatct tccacaccac
     4801 gtcggccggg aggtggccca tcatgtcggt ggccacctgc ttggtgtgag gccaggtggt
     4861 gtcggtgtgt ggatagtcgg tctcgaaggt gatgttgtcc accccgacct catcgagaga
     4921 ccgcagcccg tggttgtccc ggaagaaaca accgaacatc tggcggtagt aataggtaga
     4981 cggcggctcg gggatgatgt cggccactcc gccccacgca cggtgttcct tccagacatc
     5041 gtcggcccgc tcgaggatgt acgggatcca gccgatctga ccctcgctgt aggccaactt
     5101 cagttcgggg aagcgaacca gcacgccgga gaatagaaag tcgctcatcg aggcgatggc
     5161 attgttgaag ctcagcgagg cggccacggc tggcggggcg tccggcgaag cggccggcat
     5221 cttcgacgac gagccaatat gcatgttgac cgtggtttgg gtgtcctggc acgcctcgaa
     5281 gaacgggtcc cagtaaccgg tgtgaatgga cggcaggccc aggttggggg cgatctccga
     5341 aaagcagacg gcatggcagc ccctctcggc attgcggcgc acctcggcgg ccgccaggcc
     5401 ggcatcccac agcgggatga tgatgagcgg gatcagggcg ccgtccgaat caccgcacca
     5461 ctcctccacc atgtagtcgt tgtaggcctg cacgcaggcc agtccgaggt catggtcgga
     5521 cgcctcgtag aaggtctggc cgcagaaccg gggcagggtc gggaaagaca gtgaagcctc
     5581 gacgtggttg accttcatgt cctcgactcg ggcctttggg tcgtagcaac cgggccgcat
     5641 ctcgtcatac gtgatgggcg ccatggtcat ctcgtcgcgg tcgaagccga cggcggccac
     5701 gtggcgttta ttgggatgca ctaggtcctc gtagaaccag atgtcgcacc agggggcgtc
     5761 aggggcgtcc agttcgtact cgtacatctt cgcccctccg acccaagtca tgtcaccgag
     5821 gcggcggcgc tccacccggg gcccacggtc gcggtacttc gccggcagcc aggcctgcca
     5881 gaggtggggt ggctcgacaa tatggtcgtc gacgctgatg atcggcggga tctcggtgat
     5941 cccgttctct gagggcaggt tctctgacag cgggttcatc ggggaggttg cgcttccggt
     6001 cgaatcgagg ggccgcccaa agtttctgac ggtccgtcag attctagtcg tcgacgaacc
     6061 cgggcgcccc accaagcccc gcggctactt tcgacccatg gacgacagaa ccagcgacgg
     6121 gccctacggc gaggcggcca cctaccgacg cgacgaccac gtggccacca tcacctacca
     6181 ccgacccgag gcagccaata ccgtcaacgg tgccatgcgc cgtgacctca atggcgcctg
     6241 ggaccgattc atggccgacg aagaggcctg ggtggctgtc ctgaccgggg ccggtgaccg
     6301 ccacttctgc gggggagccg accttcgcga ccccgccggc tccacaggtg acttcaccgg
     6361 gaccttctgg gagacaccaa ccatcaactc cttcgagtcg ggcctcgagg tgttcaagcc
     6421 gaccatcgca gcggtgaacg gggcgtgcgt gggctacggc ctcaccgccg tcgtggcgtg
     6481 cgacttcgtg gtggcttctg aacgggccac cttctcctgg cccgaggtga gcatcggcat
     6541 cccaaccatc gtgggcgcca tccgactacc ccgcaaggtg gcatgggccg acgccatgga
     6601 gctcctccta accggcgagc ccatcgacgc ccagcgggca ttggacatcg gcctggtctg
     6661 gcgggtcgtc ccccacgacg agctcatggc cgaagcccgg accctggctg atcgcctctg
     6721 ccgagctgcc cccctggccg cccgaaccac caaggaggtc gccgtgcgaa cccgggacat
     6781 gggctggacc gaggccgtgc ggttcggcga gaccatgcga cgagtggccg gcgccaccgc
     6841 agacgccacc gagggccgga ccgcctgggc cgagaagcgc ccgcccgaat gggagggccg
     6901 ctgaatgggc ggccagactc ccaagcgttg aggatcggta acgggtccgc cccatcagtg
     6961 gcggtccgtc gagcaacggg agcacccaca tgaaggtcgg tatcgcattc gcaaacattg
     7021 ggccgttcgg cagcgccgaa ggggccgcgg cggtcggcgc ggccgctgag gcggcgggta
     7081 tcgactcgct gtggaccgtc gaacacgtcg tctatccgga cgagtacggg tcgacctacc
     7141 cctacgacga ttcgggccgg atggccatgg cgcccgatac cgacctcacc gacccactga
     7201 cctggctgac ctgggtgggc gcccacacct cgacgctccg tctagccacc gggatcctca
     7261 tcctcccgga acgcaacccg gtcgtgctgg ccaagcagtt gggcaccatg gatgccctca
     7321 ccggcggccg ggtcgacctg ggaattggcg tgggctggct gcgtgaagag ttcgacgccc
     7381 tgggcatccc gtgggagcga cgcggcgccc ggaccgacga gtacgtggcg gccatgcgca
     7441 ccctctggag cggcaacagc gtctcgttcg acggcgactt tgtgtcgttc tccggcgtgt
     7501 cgtccaaccc caagccagtg aacggatcgg ttcccatcgt gatcggcggc cacagcgatg
     7561 cagcggcccg gcgagccggc cggctgggtg acggtttttg gcccggcaag ggcgatctcg
     7621 accatctact ggacatcatg cgccacgaag ccgaggccca cgatcgtgac ccggacgcca
     7681 tcgaggtcac gtgggccggc gacctgaccg ccggcgagga tccggtggcc gcggccgccg
     7741 cgctggctga caagggcgtc agtcgggtca ttgtgccgtc gttcctgttc tggcgagacc
     7801 ccgagggctc actcgccgcc ttcggcgaat cagtggtcgc cccgctggcc gacctgtaac
     7861 tgaccggtag ccgatcgttc cccgcacgcc agcgctctac cctgacggcg tgcgaagaga
     7921 ggacgaacac aacaccacgg gctcgggggc ccaccggtga ccggcatgat gcgcgacccg
     7981 cgttcgtcgc gtagtcgcga cttcggaccg gccttcggca tcggcggccg aggtcgctcc
     8041 cccagagggt cttctcccag gggcgggtcc cgacgctccc ccggcggcct ccccggtagc
     8101 cccggcacgt ggctactcgg attgattgtc gtcgccttct tcgcggtgat tctcctggga
     8161 agcgacgaac cggccagcga gcaggccacc gaacaggacc tgaccgccac cgtgcagggg
     8221 gccatggtcc aggccggcct gcccaccgtg gaagtccggg tcgtcgactg gaccgtcatc
     8281 ctcgagggcc gagtggccac ctcggatcta agggaggccg ccgaacgggt ggccttcgcc
     8341 caggcggatg tgatcagcgt ccagaaccgt ctgttcgtgc cgccccccat cgacgacctt
     8401 gtcccggtca gcaccacggt gcccgacctc ccggcctcac tggccgacct cgtattgcag
     8461 gcccggctga gtgcggtggc tgcccacccc ccgatccagt tcgagagcgg cggcgaccgc
     8521 atcacactcg agtcagtgcc cacactcgac cgtctgggcg ctttcctgct attcgaaccg
     8581 gccatccgtg tgcagatcat cggccatacc gacagtgacg aacgcagccc cggagacaac
     8641 ctgcacctgt cagccgtgcg ggccgatgcc gtgcgaactc agctcctggc ccggggtgtg
     8701 gaacccgatc ggctggtcac cctggggatg ggccatgccg acccgatcgc cgacaacctg
     8761 accaagtcgg gtaaggcggc taaccggcgc atcgagttcc tgctgctacg gcccggcgag
     8821 gttggcctgc cgccacctcc cgacccgggg atccccgatc cgggtaccga cgacgaggga
     8881 aaatgattgg gagaggtcag cgagggttgc cgtcgacgga cagtgaccga gtactcaatg
     8941 aggagggctc gcatgaagac catccagagg caggacgtcc gcaacagggt gacggggttg
     9001 tgcaccagat gccaccggac cggtgcggtc gaggtggtgg ggctggtctg cgaccggttc
     9061 ggcgcctcgg cccagccgac cggcgtatgc accacgtgca gcaccaggcg aaccgtcctg
     9121 cgttcctaaa cctcgcctgc tcccccggag taggcacccg atgagcatct ggcgggcccg
     9181 ggtcaccgaa gcggcggtcg ggctgttcag ccacgccccc gacccactgg cctcaacctt
     9241 cgatcatccg ggcgaccccg gcctgttcgg tcccggttcg gtcacctggc gggtcatgtg
     9301 cgactgctcg acctttatcg gaggtgtacg tgcgctgatc gtccaggccg cccaccccga
     9361 ggtggcatcg ggggtcggcg accattcgtc gtatcggact gacccgttgg gccgcctctc
     9421 gcggactgcg tcctacgtga cggcgaccgc ctacggctcg ctgcccgagg tcgaccatgc
     9481 cgtcggcatc gtcagccgcc tgcacggtcc ggtgtcaggt aactcccacc gtggcctggc
     9541 ctattcagcg gccgatcccg agatgaaggc atgggtccac aatgcgctgg ttgactcgtt
     9601 cctggtggcc caccggacct tcggaccaga ggcgatggcc gatgccgacg ccgacgccta
     9661 cgtggccgaa caggtccgcc tcggcgtccg tatgggcgcc agcccgcttc ccgacacagc
     9721 agacgccctt accgggtggc tgctcgagca tccgtctctg ggtccgtctc cagcgggcgc
     9781 cgacgccgtg cgcttcctgg ccggaccacc cctgaacgcg ccggtccgcc tcgcctaccg
     9841 gatcatccac gatgccgcgg cggccaccat ccccacacca gtgctcgacg tgctgggcat
     9901 ccgacgtcga ccgggcgctg tgctgagggg tcgcctgctc atccgtgctc tgcgggccgc
     9961 cctcggtgct tcaccggcgt gggccgccgc gctggaacgc tgtggtcaac cacgacccga
    10021 cggcgtgcgc ttccgcaacg accccggaac cagttgctga aaaccgaccg ctgaggccgg
    10081 cggaacacct acccctttgc cggaccggat cagccggccg aggacgtggt cagtaccggc
    10141 tgactgggtg tgaactccac cggcaggtgt ttgatgccgt tcacgaagtt catgcggagc
    10201 cgatcggccg gaccagtgat ggtgatgtcg ggtagccggg cagccaggcc ctcgaagatg
    10261 agcttcagtt ccagcttggc caggttggcc cccaggcaga agtgcgcccc tccgccaccg
    10321 aaggccaggt ggtggttgtc ggtccgggtc aggtcgaggc ggtgggggtc gtcgtagacc
    10381 ttctcgtccc ggttgcctga cggataccag agtgtgacct tgtcgccggc ccggatctgt
    10441 tgcccaccca gctcggtgtc ggcggtggcc gtccgacgga agtagttaac cgggctggtg
    10501 taccggagga tctcgtcaac cgcatcgtcg gtcatctcgc cggtctcgac cactgtggcc
    10561 cactggtccg gatggtccat gaagcccatc aggcctagtg agattgcgtt gcgcgtcgtc
    10621 tcgttgccag ccaccagtaa cagggtgaag aagaggtcac gctcgaggtc ggtcagctcg
    10681 gtgaccgtgc cgtcgtcgag cgtgaccgtg gccgaagtga ggacggtcca caggtcatcc
    10741 tcgggctggg cccgcttctg gtcggtcaac ccgtgcgcgt agaaggccat ctcgatcatg
    10801 gccgactcgt aggtggtgct gtgatcggag tcctcgtcgc cggtcggctc gtcctggtac
    10861 tcggggtcgc tcccgccgat ggtgcggttg gaccagtcca ggagctgctc acggtcctcg
    10921 tcgggcacgc cgatgatgtc ggcgattgcc atgagcggca gttcagcagc cacgtcgagg
    10981 acgaagtcgg cgcttccctg ctcgcagatg cgatccagga tgatgttggt ccgcagacgc
    11041 atgacctctt ccatgcgccg gaccatgcgg ggcgtgaagc cggtgttgac cagcttgcgg
    11101 tagcgggtgt gctgcggcgg gtcggtcatc accatctgga ggcccggccc gcgcccgtca
    11161 gcgatgtcgt tcagggcgat gcctcccgca ccgtcgcgtc ccggaccagt ctggtgggaa
    11221 aagagcgtgc ccgaccggtg ggcctcggag atgtgctcga acgacgacac cacccagaac
    11281 ggctcggggt gctcgtcggt cggtgggtgc tgccataccg gggcctcccg ccgaagcaag
    11341 tcgaaccagt cgtggggcat tcgctcggcg aacacatccg gattggtcag gtctatatcg
    11401 ctaagggtcg gggcgctcag ggtctggtcg gcgggcgatg ccattgtggt cctccggtag
    11461 gttccttccc cggaagatat cttccccgga agatatctgc aaccccgccg ctaggctccc
    11521 gtccatgggt ggacctgcgg accagacgga gcagttggat ctggtggaac aggcggtcga
    11581 ccgcctcgtg cccgagggcg acgcggccca ttccgcccgc agcgccacca ccgccggaat
    11641 actcgtctgg gcctacctgg ccggccgcga gttggaggtc tggatggccg atgccctcgg
    11701 gcctaccggc ctgactacct cggagttcgg cgccctcgcc ggggtggctt ttgccggcga
    11761 acacaccctc accgccggcg atctggcccg gtggaccgtc cagacctcgg gtggcaccac
    11821 caagaccatt caacgactgg tcgaccgcgg gctggtcgtc cgggcggccg acccgggcga
    11881 cggacgacgg accctgatcg acgccaccac cgaaggtcgc tccctggcca ccgccgtggt
    11941 cgccgacctg gttgtccgcc tcgaccgcga cctcggcccg ttgaacgccg tggcacgcga
    12001 cgaccttcac gacggactcc ggcgactgtc ggccgccctc ggttggcagg cagacgccca
    12061 gacaatggcg gactcgggct agacatcggg tcgtgaaccc acccgcgtga cgcagcgcct
    12121 cgcctagccg tggacaaggt gacaagaaga ccctctcctc cgcagtcatc gccatgctcc
    12181 actgggctac cggctgcccc ttatggaggt cacgcccgtc agctgaaact taggaccggg
    12241 tcaccccaga gcgactcgtc gggtgtgatg cccaggccgg gcccgggtgg caggtcgatc
    12301 cacccgccgt cgagacgaat gccgtgctcg acgtcgtagt ggccgtccac gtagggctcg
    12361 gcgatccacg ttccctcaaa gttggccgga tccacggtgg cccccacgtg caatgaagca
    12421 gcggccacca agtcgccacc ccacgtgtcg tccacggtgt ggggccgccg ggccgccgca
    12481 cacacgtcgc gcacggcccg catggcgctg atgcctccga cccgactgac cttcataccg
    12541 aacccgtcgg ccacccgctg cccaatagcc gccaccaccg cgcctaggtc agtggccgac
    12601 tcgtccaggt agatcggatg gcagaccttt ccgactagcg aggcgttctc ctcataggag
    12661 tcgcacggct gctcgatcac cagggcgata tcccgacagg cattcgacac ctggatggca
    12721 tcccgggtgg tccacccctt gttggcgtcc gctgccagcc gcacgccggg acgcagggtg
    12781 gcggccacgg cccggagagc cgcgatgtcg tcctcaaccg gccgaccacc gaccttgagc
    12841 tggatccggg agaagccctc tgtctggcgg gcatcggcat cggcggccga atcctccggc
    12901 gaggcgatca gtaccccgtg gtacgacggc acccgctcgc gtaccgctcc gcctaggagg
    12961 tcgcagaccc ggactccgta cgccttgccg gtggcgtccc agcaggccac gtccacggcc
    13021 gctttcgcgt accgatgccc catgagggca gcgtccatcg ccgctccgac ccggccgata
    13081 gccgtcggag ccaggccgac gaggtgcggg gccatctcgg ccaacgccgc acgtgcgccc
    13141 agggcgtgct ggggctggta cgtggagccc agcggacacg tctcgccgta tcccaccgtg
    13201 ccgtcatcgc actggagtcg gacaatggtc gtatccagat gccagacgtc ctggacagcc
    13261 attcggtagg gctcgccgtc gaccgggccg cgaacgggta ggtcatgctg gaacacgtcg
    13321 acggcgacga tcttcatcgg cgaccccccc ccgatccggg ccgggcaacc ccggcgaccg
    13381 cgcggacttt agcggcagtc cggctccccg gattccttcg ggagtttccc tgcggtgccc
    13441 gcgctcgttc cgactagagc agattttccc atgaatacag gtttttcctc ccagtaggga
    13501 tttttcttga atcctgtggc aagcgtcact actctgcggg aaggtctttt gaggggtgcc
    13561 cattcacagg tgctctgcgg ccattcagtg gggtgcggta ctgctccccc ttaaccaaac
    13621 agaggggaaa cgtttcatgt tgaagcgatt catcgtcatt ctcgccgcac tggcgatggt
    13681 ggcatcggcc tgcgggtcgg acagcgacga cgctgcatca agtggtggcg acagcgccgc
    13741 ttcttccagc gacagcagca gcagcagcga cagcagcagc gacagcagca gcgacagcag
    13801 cagcgacagc gccgcatcat cggattcgtc ggatccgatc aagttgccga tccacaactg
    13861 gtcgtcccag atcgccggcg tctacgccgt tggtgcgatc ctggaggcaa ccggcaactc
    13921 ggtggagtac atctcggcgg attccacgct ggtgtacacg tcgatgtgtg agggtg
//
LOCUS       DASCMR010000045         4842 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000213516, whole genome shotgun sequence.
ACCESSION   DASCMR010000045 DASCMR010000000
VERSION     DASCMR010000045.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4842)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4842)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4842
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000213516"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            190..477
                     /locus_tag="QGG16_01040"
     CDS             190..477
                     /locus_tag="QGG16_01040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23893.1"
                     /translation="MSTFPDDLPPQPPVGDVNVVYLGPSAPHWEVRSSFGDPQMIELF
                     RDRVQARLMLLPPHDPQFRRNRERINRDAERENVLISWDLGYEEEESQASA"
     gene            complement(659..985)
                     /locus_tag="QGG16_01045"
     CDS             complement(659..985)
                     /locus_tag="QGG16_01045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015797797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WhiB family transcriptional regulator"
                     /protein_id="HJP23894.1"
                     /translation="MSTQLLEFNPISPLAESPTAEGAASTWMARGACAQSNPNVFFPH
                     DGVGVEIAKAICADCRATSPCLEYALANRIEHGVWGGCSERQRRRILRDRRAAARSTG
                     LVAVAA"
     gene            1239..2342
                     /locus_tag="QGG16_01050"
     CDS             1239..2342
                     /locus_tag="QGG16_01050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005436 - sodium:phosphate symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015114 - phosphate ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0035435 - phosphate ion transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0044341 - sodium-dependent phosphate
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi symporter"
                     /protein_id="HJP23895.1"
                     /translation="MVTLLRGFLVLALLYLFLTGVELLSGGFKIMGKGFVDGLFEGVS
                     NPLAGLFVGLLATVLVQSSSVSTSVIVGLVASGVVGPDEAVPMIMGANLGTTVTNTVA
                     SLGHVRRDQEFRRAFAAATVHDFFNILAVAIFLPIELATGYLSETAEWITERVLGSSG
                     AAFDSPLKAAVKKPASLVKDVLDDLGAHGNWKGGLMIVVGLACIFVALGYITKNMRLL
                     VADRVEAAINRALGAGSGIVAIVLGMVITIAVQSSSITTSVLVPLAASGVLTLENIYP
                     VTLGANVGTTVTALLASLATGNPAAVTVALVHTLFNLSGILLFYPIRVLRNLPLRLAT
                     GMSDIAAERRSTAIGYALGMFVVVPLLGVLLLR"
     gene            2464..3126
                     /locus_tag="QGG16_01055"
     CDS             2464..3126
                     /locus_tag="QGG16_01055"
                     /inference="COORDINATES: protein motif:HMM:NF014010.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoU domain-containing protein"
                     /protein_id="HJP23896.1"
                     /translation="MSFFRRPDDSGIDHIEAQVQRMVNDARHTFDLAMNAITGGSVSS
                     VADEVRRTDRQINITEMEIRRELVVHFSVHAGADATEMLVFMNMIKDLERIGDYNKNV
                     FDLAEEGVSFADDADLGLILGFRDEISSRIALMGEILTVRDEERARAFIAQGDEMRRK
                     FDALVTDLVHATDPASHAVPRALLFRFLKRITAHSVNVVTAVVMPVDRLDYHDESDDT
                     RV"
     gene            3216..4043
                     /locus_tag="QGG16_01060"
     CDS             3216..4043
                     /locus_tag="QGG16_01060"
                     /inference="COORDINATES: protein motif:HMM:NF014077.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HJP23897.1"
                     /translation="MRVLVTNDDGISSPGLHALAATVADAGHEPVVAAPSTDWSGASA
                     CLGPLDDPDRVSVRRVEVPGVAGPTGGPLIGYSVGAPPALISMLADLGGFGPPPGLVV
                     AGINRGPNTGRSTLFSGTIGAVLAGERFGLSGMAVSADVTVTGETGATGAPGDVHWET
                     AARVARVVLPWLVDAPARTVLNVNTPDIPLADLRGVRFAELAPVGGVRTVITGRDSTG
                     LDLDLVANEELMPDDSDTALIRAGWAAVTPITPASAFGLDLPLAEWERDIGGEDRPR"
     gene            4057..>4842
                     /locus_tag="QGG16_01065"
     CDS             4057..>4842
                     /locus_tag="QGG16_01065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23898.1"
                     /translation="MSPFTRFGRTHGLGAMSDAMLAVALAGSIFFSIDPDAARWRVAL
                     YLLLTIAPFAVVTPLLGPLVDRVKGGRRGMIITSILARMLIAWQMIEHIDGLLLFPLA
                     FGLLVMQKTYSIAKSAVVPSLVRNDIELVEANAKLAMLSAVCSMVGAGIGGIALLFSS
                     SSPAVVAVIGYGLTMVAAVQVPKVLVADAPVSAGERAVLRQRGILTASLAIGLLRAVV
                     GFTSFLLAFEFRGGGGGVSIESVGRPAGAGSGLVRGESVLAAAP"
BASE COUNT          744 a         1573 c         1605 g          920 t
ORIGIN      
        1 accgaagctg gcccgcaacc tcggcaaggc ccagaaggag ctccagcggg ggctcgccga
       61 gggtcaggca gaagccgaca aacagtcgga ggcccaaccg gagaaggacc aggagtaggc
      121 gccccacgtg gcgtcccgaa ctgccgaccc cagccaagcc ccggtgggcc accggtacac
      181 tccccgccca tgagcacctt ccccgacgat ctcccacccc agccgccagt cggcgacgtg
      241 aacgtcgtct acctcggtcc gtcagccccc cactgggagg tccggtccag tttcggtgat
      301 ccgcagatga tcgaattgtt ccgtgatcgt gtgcaggccc ggctgatgtt gctgccgccc
      361 cacgatccgc agttccgacg caaccgggaa cgaatcaacc gcgacgccga gcgcgagaac
      421 gtgctcattt cctgggacct cggctacgag gaagaagaga gccaggcctc agcctgagct
      481 tcggcttctg acatcggctc cattctggtt cgccggctgt ggccaaaacg acagcaaccc
      541 cgacgattgg ctcgtcggga tcactgccgc agggaggccc tgcaccgggg cgagagggga
      601 acgccccgtg atcggccgga tgctgcctcg tggcagcgca ccgggatcag aacaagaatc
      661 aggccgccac ggccaccaga ccggtcgaac gggcggcggc ccgacggtcc cggaggatgc
      721 gtcgacgctg gcgctccgag cagccacccc agaccccgtg ctcgatccga ttggccagcg
      781 cgtactccag acaggggctg gttgcacggc agtcggcgca gatcgccttg gcgatctcca
      841 cgcctacacc gtcgtggggg aagaaaacgt tcgggttgct ctgggcgcag gcgccgcgcg
      901 ccatccaggt cgacgccgct ccttctgccg tgggtgattc ggctagggga ctgatgggat
      961 tgaattccag caactgggtg ctcatggttc tcggtgctct gctttctgct tgcgtgctct
     1021 ccgtgggggc gacccggaga gtggtcgctc cgcccatgca ggtgtgcctg cagggagagt
     1081 tctctcacat cggaccgaaa acccccgtaa agggcgcgat ggccgggccg gtcttctagg
     1141 gttcggcccc ggtggctcct gacacgtctt ccccgaacca cggttccccg tcgcagggtc
     1201 cgccttcgtt gcggccattg tctgaccagc aacgcgagat ggtgaccctc ttgcggggct
     1261 tcctcgtcct ggcgctgctg taccttttcc tgaccggggt cgagctgctc agtggcggct
     1321 tcaagatcat gggcaagggc tttgtggacg gcctgttcga gggggtgtcc aatcccctcg
     1381 ccggcctctt cgtcggtctg ctggctactg tcctagtcca gtcgtcatcg gtgtcgacgt
     1441 cggtgatcgt tgggttggtg gcgtctgggg tggtaggccc cgacgaggcc gtgccgatga
     1501 tcatgggtgc caatctgggg accacggtta ccaacacagt ggcctcgctc ggccatgtcc
     1561 gacgcgacca ggagttccgg cgggccttcg cggcggccac cgtgcacgac ttcttcaaca
     1621 tcctcgcggt ggccatcttc ctgcccatcg agctggccac cggctacctg tccgagacag
     1681 cggaatggat caccgagcgt gtgctgggca gttccggggc ggctttcgac agcccgctga
     1741 aggctgcggt caagaagccg gccagcctgg tcaaggacgt cctcgacgac ctgggtgccc
     1801 acggaaactg gaagggcggg ctgatgatcg tcgtcggtct ggcctgcatc ttcgtggcgc
     1861 tgggctacat cacaaagaac atgcggctgc tggtggccga ccgagtggag gcggccatca
     1921 accgggctct cggggccggt tcgggaatcg tggccatcgt cctgggcatg gtcatcacca
     1981 ttgctgtgca gtcgtcgtcc atcacgacct cggtgctggt gccactcgcc gcgtcgggcg
     2041 ttctgacgtt ggagaacatc tatccggtaa ccctgggagc caacgtcggc accacggtga
     2101 cagcgttgct ggcctcgctg gccactggaa accctgccgc ggtcaccgtg gccctcgtgc
     2161 acaccctgtt caacctcagc gggatcctgc tcttctaccc gatccgtgtc ctacggaacc
     2221 tgccgttgcg tctagccacc ggtatgtccg acatcgccgc ggagcgaaga agcacggcca
     2281 ttggctacgc cctaggcatg ttcgtggtcg tcccccttct cggcgttctt ctcctccgat
     2341 gagtgtgcgc gtccgttcga cggtcagccc gccatcccga gggggatccg gccgcgacct
     2401 gaagcacggt caaacctcgc tggtaccgtt gcccctaacc cgtcaggagt ccctcccatg
     2461 gtcatgagct tcttccgccg ccccgatgac agcggtatcg accacatcga ggcccaggtc
     2521 cagcggatgg tgaacgacgc ccgacatacg ttcgacctgg ccatgaacgc catcaccgga
     2581 gggtcggtgt cctcagtggc tgacgaggtc cggcggaccg atcgccagat caacatcacg
     2641 gagatggaga tccgccgtga gttggttgtc cacttttcgg tccatgccgg cgccgatgcc
     2701 accgagatgc tcgtgttcat gaacatgatc aaggatctcg agcggatcgg tgactacaac
     2761 aaaaacgtct ttgacctggc cgaggagggc gtgtcgttcg ccgatgacgc agacctcgga
     2821 ctgatcctcg gcttccgtga cgagatctcc tctcgtatcg ctctcatggg cgagatcttg
     2881 accgttcgtg acgaggagcg tgcccgggcg ttcattgccc agggggacga gatgcgtcgc
     2941 aagtttgacg ctctggtgac cgacctggtg cacgccaccg acccggcgtc acatgccgtg
     3001 ccacgtgcac tgttgttccg gttcctgaag cggatcaccg ctcacagcgt gaacgtggtg
     3061 accgcggtgg tcatgccagt ggatcgcctc gactaccacg acgagtccga cgacacccgg
     3121 gtctgaccgg ctcgagtggc tcgggaacgg gtggctaggg agtcggtcgc ttaaaagcgg
     3181 gtctgtccat catgaaccgc tcctagggtc gaaccgtgcg tgtactggtc accaacgacg
     3241 acggcatctc ctcaccgggc ctgcacgcgc tcgccgcgac ggtggccgat gctggccacg
     3301 aaccggtggt cgcggccccg tccaccgact ggagcggtgc ctcggcctgc ctgggcccac
     3361 tcgatgatcc cgatcgcgtc tcggttcggc gggtggaggt gcccggtgtg gctggtccga
     3421 ctggcggccc gttgatcggt tactcggtcg gcgccccgcc ggccctgatc tcgatgttgg
     3481 ccgatctagg tggctttggt ccgccgcccg ggctggtagt ggccggcatc aaccgtgggc
     3541 cgaacaccgg ccggtccacc cttttctcag ggacaatcgg tgccgtgcta gccggtgaac
     3601 gttttggcct atccggtatg gcggtaagcg cagatgtcac ggtcaccggt gagacggggg
     3661 cgacgggggc acctggcgac gtccactggg agaccgccgc ccgggtggcc cgggtggtcc
     3721 tgccgtggct agttgatgca ccggcccgga ccgtgctcaa cgtgaacacc ccggacattc
     3781 cgttggctga cctccggggg gtccgatttg ccgaactcgc ccccgtcggt ggcgtacgga
     3841 cggtgatcac cggccgtgac agtacggggc tggacctcga tctggtggcc aacgaggaac
     3901 tgatgccaga cgacagcgac accgcgctga tccgtgcggg ttgggccgcc gtcacgccga
     3961 tcaccccggc gtccgcgttc ggtctggacc tgcctctcgc cgagtgggag cgagacatcg
     4021 gcggtgagga taggccgcga tgagcccggc caccccgtga gtccgttcac ccgattcggc
     4081 cgtacccacg gcctgggcgc catgtccgac gccatgctgg ccgtggccct cgccggttcg
     4141 atcttcttct ccatcgaccc cgatgcggcc cggtggcggg tcgccctcta cctgctgttg
     4201 accatcgcac cgttcgctgt ggtcacccca ctcctgggcc cgttggtcga tcgggtgaag
     4261 ggtggtcgtc ggggcatgat cattacgtcg atcttggccc ggatgctgat cgcctggcag
     4321 atgatcgaac acatcgatgg gctgttgttg tttccgttgg ctttcggcct gctggtgatg
     4381 cagaagacgt actcaatcgc gaagagcgcg gtggtgccgt cgctggtccg caacgacatc
     4441 gagttggtcg aggccaacgc caaactggcc atgttgagcg cggtctgttc gatggtgggc
     4501 gcaggaatcg gaggcatcgc cctgctgttc agctcgtcgt cgccggccgt ggtggcggtt
     4561 atcggctacg gcctgacaat ggtggccgcc gtccaggtgc ccaaggtgct ggtggccgac
     4621 gcgccggtgt cggccggcga acgagccgtg cttcgccagc gcgggatcct cacagcgtcg
     4681 ttggccatag ggctactacg ggccgtggtc ggcttcacat cgttcttgct ggctttcgag
     4741 ttccgaggtg gtggtggcgg tgtgtcgatc gagtcggtcg gccgaccggc tggtgcgggt
     4801 tcagggttgg tccgaggtga gtccgtgctg gctgccgcac cc
//
LOCUS       DASCMR010000046         8395 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000222532, whole genome shotgun sequence.
ACCESSION   DASCMR010000046 DASCMR010000000
VERSION     DASCMR010000046.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 8395)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8395)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8395
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000222532"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..443
                     /locus_tag="QGG16_01070"
     CDS             <1..443
                     /locus_tag="QGG16_01070"
                     /inference="COORDINATES: protein motif:HMM:NF014567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HJP23899.1"
                     /translation="FGAAAGRAGVVLELEQRSGLDVLADAAALRRAVANLLSNAIRVS
                     DGGGVVRVATGRDDDMVWVSVVDDGPGIAAEHLEHVFQRFWRGDRASAREVGRSGLGL
                     AIVRQIAEGHGGRATVRSVPGEGATFAVWLPRYVDRIVSRRDRI"
     gene            527..2122
                     /locus_tag="QGG16_01075"
     CDS             527..2122
                     /locus_tag="QGG16_01075"
                     /inference="COORDINATES: protein motif:HMM:NF012318.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HJP23900.1"
                     /translation="MPEESSPEEQPIPRSVERRSIEVGRRAGSVTPPRPDEPSFPGLL
                     PAPVPPIEAPLRLTGRVLAGVFAIAVLVAALVAGAVAGWMLRGDDDDLAFSADVVADL
                     VERVRVGESSGLTADEVREILARESAGVESSDTLSTADVEAIVADRLADRGAETEGLS
                     SAEVSSIVSTVVEEAAGLDQSEVEAVVSRLVEESAGLTAIEVEALVARLFAEAPVDDS
                     GEEPVVAVAEALRDTVVLVTAIDKGHGSGIVFDESRIVTNAHVVDGADEILVTLPSGR
                     EIAATVVGVDVRRDVAVLELVEPADGLVPAVFAFSEDLEVGQLAVAVGSPFDLDRTVT
                     AGIVSALGRVIDSYGCESGAGADCAGVAMIQTDAPINPGNSGGPLADRDGRIIGMNTS
                     IQIGGAFTGGNIGLGFALPSDTVVLVARRLITGEPVGTAWLGIRGESPTDGNFGAVIV
                     EVIEGSPASGAGLLEGDRIFRSDGRLIRDMPALRADIQIRLPGTSVDLEVDRDGEILL
                     IEVDLGALDDQFTEPSTGGDADD"
     gene            2187..3092
                     /gene="ftsY"
                     /locus_tag="QGG16_01080"
     CDS             2187..3092
                     /gene="ftsY"
                     /locus_tag="QGG16_01080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HJP23901.1"
                     /translation="MGLRSRLGRARDAWSSHLATIRASEVVDDRIWQELGDALILADV
                     GVATADELLDEVRQRVGREGVDDVDGVLGILKSVLVDRLGGADRSLALGGSPSVWLFV
                     GVNGVGKTTTIGKLGGREADAGRHVVFAAGDTFRAAAADQLAMWADRAGAPVVRGAEG
                     ADPSSVVFDAVEHAAARGADLVLADTAGRVHTKSNLMDELAKVRRVAEKGSGTVTETL
                     LVIDATTGQNGLIQARQFAEVAAVTGIVLTKLDGSARGGIVVAVQEDLGIPVKLVGVG
                     EGADDLVEFDPVDFVDALFAVDVTA"
     gene            3106..4593
                     /gene="ffh"
                     /locus_tag="QGG16_01085"
     CDS             3106..4593
                     /gene="ffh"
                     /locus_tag="QGG16_01085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0048501 - signal recognition particle,
                     plasma membrane targeting [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005048 - signal sequence binding
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HJP23902.1"
                     /translation="MFESLSSRFEGVLKRIRGKGRLGPEDVEEFLGELRVALLEADVH
                     LSVVRTFQDRIRERAVGVEVSGALNPGQQVVKIVLEELTGVLGGETHRLTYASKPPTV
                     VLLAGLQGSGKTTTAAKLARWFKAQGRNPMLIGADLQRPAAVEQLRTLAARIDVPVFS
                     EATDPVSVARAGLAQARSLGRDVVICDTAGRLAVDDDLMAEVAEMAAVLDPDHTLLVV
                     DAMIGQDAVNTAEAFHARLSLDAVVLTKLDGDARGGAALSVKEVVGRPIAFASTGEAL
                     EDFDLFHPDRLASRILGMGDVETLIEKAEESFEQAEAEAAAARLMDGTFTLDDFLEQL
                     KALRKMGPLSNIMGMVPGMAQQLKGVDAEVDERRIDRIEGIIHSMTPGERAAPDVIDG
                     SRRARIAAGSGTQPNEINQLVRQFREMRKMMKQMGGKGRRSGGRPSAGKGRGKGRRGG
                     GGRTTALGPAPIDKKKGLSLPGLGETPGGVPGGLGLPGEGSPGRP"
     gene            4827..5399
                     /gene="rpsP"
                     /locus_tag="QGG16_01090"
     CDS             4827..5399
                     /gene="rpsP"
                     /locus_tag="QGG16_01090"
                     /inference="COORDINATES: protein motif:HMM:TIGR00002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HJP23903.1"
                     /translation="MKLRLMRMGKKKQPTYRVVAADSRKARNGRIIEAVGFYDPRRDP
                     SVIEIDNEKAVGWLRNGAQPTERVEKLLKITGAWDEFKGQPAGTSVTAAPEPKPEVVA
                     TPVEEAPVEEASVEEAAVEEAVEEAPVEDASVEEAAVEEAVEEAPVEEASVEEAAVEE
                     AVEEAPAEEASVEEAPVEEAAAEETVEEES"
     gene            5396..5644
                     /locus_tag="QGG16_01095"
     CDS             5396..5644
                     /locus_tag="QGG16_01095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HJP23904.1"
                     /translation="MSAEAPTAESVLEYLIKTIVEQPDEVRIQASGDERCTFSVTVAD
                     GDMGRVIGRRGRVANAIRTIVRAAAVNDETEIDVDFVD"
     gene            5652..6200
                     /gene="rimM"
                     /locus_tag="QGG16_01100"
     CDS             5652..6200
                     /gene="rimM"
                     /locus_tag="QGG16_01100"
                     /inference="COORDINATES: protein motif:HMM:TIGR02273.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HJP23905.1"
                     /translation="MDGGPDPDGPALLEVGRIDKPHGVRGEVVVSLITHRTERLAPGA
                     ELQTDRGAITVESSRPHQHRYLVRFDRIPDREAADAWRGVVLSAPPIDDPDDDTLWIH
                     QLMGSVVVDQHGVEHGVVTGVLENPASDLLELDDGRLVPLVFLTAFEPGVRIDVDVPV
                     GLLDGDDVDPEVASDADPDQTP"
     gene            6197..6937
                     /gene="trmD"
                     /locus_tag="QGG16_01105"
     CDS             6197..6937
                     /gene="trmD"
                     /locus_tag="QGG16_01105"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HJP23906.1"
                     /translation="MTLRVDVFTLFPGLIGAYTGESILGRASDAGHLDVRAHDLRMAA
                     TDAHRTVDDSPFGGGAGMVMMPEPVFAAVELVEPPRPLILLSPAGRRFDQSVAVELAA
                     LDGFSLLCGRYEGVDERIRTELCDDELSLGDYVLAGGELAALAVIEAVARLRPGVLGN
                     SASPEDESFTDGLLEYPHWTRPAEFRALSVPDVLLSGDHARVARWRRAAALARTIERR
                     PDLIEQRGGLTEADQDLLDEFGTPDPND"
     gene            7085..7432
                     /gene="rplS"
                     /locus_tag="QGG16_01110"
     CDS             7085..7432
                     /gene="rplS"
                     /locus_tag="QGG16_01110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HJP23907.1"
                     /translation="MQPTDLVDHQNLRDDVPDFNAGDALKVHVRVVEGNRKRVQLFEG
                     VVIRRQGSGVRETFTVRKLSFGVGVERTFPVHSPIIDRIEVGARGDVRRAKLYYLRDR
                     IGKRAKVKEKREF"
     gene            7880..8212
                     /locus_tag="QGG16_01115"
     CDS             7880..8212
                     /locus_tag="QGG16_01115"
                     /inference="COORDINATES: protein motif:HMM:NF024834.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HJP23908.1"
                     /translation="MRLHCALFLVLAVLGASCASPPQVPGADDGSADPALVRGREIWG
                     KACASCHGSDGSGGRGPSLVSVEIRFPVLADQLTVVTDGQGSMPGFSGRYDPEELEAV
                     VRYTREVL"
BASE COUNT         1333 a         2553 c         3047 g         1462 t
ORIGIN      
        1 acttcggagc ggcggccgga cgggcgggcg tagtgctgga gctcgagcaa cgatcgggcc
       61 ttgacgtatt ggccgacgcg gctgccctcc ggcgggcggt ggccaacttg ttgagcaacg
      121 ccattcgggt gtcggacggg ggcggggtgg ttcgggtggc caccggccgc gatgacgaca
      181 tggtgtgggt atcagtggtc gacgacggac cagggatcgc cgccgagcac ctcgaacatg
      241 tcttccagcg attctggcgg ggcgaccggg catcagctcg ggaggtagga cggtcagggc
      301 tgggtctggc catcgtccga cagatcgccg agggtcatgg gggacgagcc accgtccggt
      361 ccgtcccggg cgaaggtgcg accttcgccg tgtggttacc ccggtacgtg gaccggatcg
      421 tgtcccgtag ggaccgcatc tgaggcgaga ccgtcagcgc ggtcgccggg gcggtcatag
      481 gcgcgctgcg tcggtaacgc gccctgttcc gtctaccttc tcctccatgc ctgaagaatc
      541 gagccccgag gaacagccga ttccacgatc cgttgagcga cggagtatcg aggtcggccg
      601 ccgggccggt tcggttacgc cgcctcgtcc cgacgagccg tcttttccgg gactgctccc
      661 ggctcccgtg ccgccgatcg aggcgccgct acgcctcacc ggccgggtat tggccggcgt
      721 gttcgccatc gccgtgctgg tggccgccct ggtggccggt gcggttgccg gctggatgct
      781 ccggggcgac gatgacgacc tggcgttctc tgccgacgtg gtggccgacc tggtcgagcg
      841 ggtgcgtgtg ggcgaatcgt cgggtctgac cgctgacgag gtccgggaga tcctcgcccg
      901 tgagtccgct ggggtcgagt cctccgacac cctctccaca gccgacgtgg aagccatcgt
      961 ggctgaccgc ttggccgatc gcggggccga gaccgagggg ctcagttccg ccgaggtgtc
     1021 ctccatcgtg tcgacggtgg tcgaagaggc agcaggcctc gaccagagcg aggtggaggc
     1081 tgtggtcagt cgcctcgtgg aagagtcggc gggcctgacg gcaatagaag tcgaggcatt
     1141 ggtggcccga ctcttcgcgg aggcacccgt tgacgattcg ggcgaggaac cggtggtggc
     1201 ggtggccgag gccctgcggg acactgttgt gctcgttaca gcgatcgaca agggtcacgg
     1261 ctcgggcatc gtgttcgacg agtcgcggat cgtcaccaac gcccatgtgg tggacggcgc
     1321 cgacgagatt ctcgtgacgc ttcccagcgg ccgggagatc gccgccacgg tggtcggcgt
     1381 cgacgtgcga cgcgacgtcg ccgtgctcga gttggtcgag ccggcagatg gcctggtgcc
     1441 cgccgtgttc gcctttagcg aggacctgga ggttggacag ttggcggtgg ccgtcggcag
     1501 tccgttcgac ctggatcgga cggtgaccgc gggcattgtg agtgcccttg gtcgggtcat
     1561 cgattcctac ggctgcgagt cgggggcggg cgccgactgt gccggcgtgg ccatgatcca
     1621 gactgatgcc ccgatcaatc cgggcaactc gggtggcccg ctagctgacc gtgacggccg
     1681 gatcatcggg atgaacacct cgattcaaat tggtggagcc tttaccggag gaaatatcgg
     1741 gttggggttt gccctgccca gtgacaccgt ggtcctggtg gcccgccgtc tgatcaccgg
     1801 cgagccggtt gggaccgcgt ggttggggat ccgaggcgag tccccgaccg acggcaactt
     1861 cggggcggtc atcgtggagg tcatcgaggg atctccggcc agcggtgcgg gtctgctgga
     1921 gggcgaccgg atcttccgct ccgatggtcg gctcatccgg gacatgccgg cgttgcgggc
     1981 cgacatccag attcgtttgc cgggaacgtc ggtcgacctg gaggtggacc gagatggaga
     2041 gatcctcctg atcgaggtcg atctgggtgc tctcgacgac cagttcaccg aaccgtctac
     2101 cggcggggac gcggacgact gacccaacgt tcagcccggt tccggcccgg gttcggatcg
     2161 gaaccccacc ggtagccttt cgggccatgg gtctccgctc ccgtctcggt cgtgcccgcg
     2221 acgcatggtc ttcgcacctc gccacgatcc gtgcatccga ggtggtcgac gatcgcatct
     2281 ggcaggaact gggtgacgcc ctgatcttgg ccgacgtcgg cgtggcgaca gctgacgagt
     2341 tgttggacga ggtccgccag cgggttgggc gtgagggcgt ggacgacgtc gacggggtgc
     2401 tgggaatcct caagtcggtt ctcgtggatc gtctgggtgg cgccgatcgc tcgctggccc
     2461 ttggcggaag tccgtcggtg tggctgttcg tcggtgtgaa cggggtgggc aagacgacga
     2521 ccatcgggaa gttgggtggc cgtgaggctg acgcgggccg tcatgtggtg tttgctgctg
     2581 gcgatacctt ccgggccgcg gcggccgacc agttggctat gtgggccgat cgcgccggtg
     2641 cgccggtagt gcggggcgcg gagggcgccg atcccagctc tgtggtcttc gacgccgttg
     2701 aacacgcggc ggcccgaggt gccgacctcg tcctggccga cacggccggt cgtgtccaca
     2761 cgaagtccaa cctgatggac gagctggcca aggtgcggcg ggtggcggag aagggctcag
     2821 gcacggtgac cgagacgctg ttggttatag atgccaccac tgggcagaac ggattgatcc
     2881 aggcccggca gttcgctgag gtggctgccg tgaccggcat cgtgctgacc aagttggacg
     2941 gttcggcccg gggcggcatc gtggtcgccg tgcaggagga cctgggtatt ccggtgaagc
     3001 tggtcggggt gggtgagggc gccgacgacc tcgtcgagtt cgacccggtg gacttcgtgg
     3061 acgcactctt cgccgttgat gtgacggcct gaggagaagc cgaccgtgtt cgagagtctg
     3121 agtagtcgat tcgagggggt cctaaaacgg atccggggca aaggtcggct cggtcccgaa
     3181 gacgtcgaag agttcctcgg cgagcttcgg gtagccctgt tggaggccga cgttcacctg
     3241 tcggtggttc ggaccttcca ggatcggatc cgcgagcggg ccgtcggcgt cgaggtcagc
     3301 ggagccctca atcccggaca gcaggtcgtc aagatcgtgc tcgaggagct caccggggtg
     3361 ctcggaggcg agacccatcg gctgacctac gcatctaagc ctccgacggt ggtgctgctc
     3421 gccggcctcc agggatcagg caagacgacc acggcagcga agttggcccg ctggttcaag
     3481 gcccaaggac gaaacccgat gctgatcggg gctgatctcc aacgcccggc ggccgtcgag
     3541 cagttacgga cgttggctgc ccgcatcgac gtaccggtgt tcagcgaggc caccgacccg
     3601 gtctccgtgg ctcgtgccgg tctggcgcag gcccgcagcc tgggacgtga cgtcgtcatc
     3661 tgtgacacgg cggggcgcct ggccgttgac gatgacctga tggccgaggt ggccgaaatg
     3721 gcggcggtac tcgacccgga ccacaccctc ctggttgtcg acgccatgat cggccaggac
     3781 gccgtcaaca cagctgaggc tttccatgcc cggctctcac tggacgcggt tgtgctcacc
     3841 aagttggacg gcgacgcccg gggcggtgca gcgctgagcg tcaaggaggt ggtgggtcgt
     3901 cccatcgcct tcgcgtcgac tggggaggcc ctagaggact ttgacctgtt ccacccggac
     3961 cgcctggcca gtcggatcct gggtatgggc gacgtcgaaa cgctcataga gaaggccgaa
     4021 gaatcgttcg aacaggccga ggctgaggct gccgccgccc gcctcatgga cgggaccttc
     4081 accctcgacg actttctcga gcagctcaag gcccttcgga agatggggcc gctcagcaac
     4141 atcatgggaa tggtccccgg gatggcccaa cagctgaagg gtgtggatgc cgaagtggat
     4201 gaacgccgga tcgaccggat cgaggggatc atccactcga tgactcccgg tgagcgggcc
     4261 gccccggacg tcatcgacgg ttcccgtcgg gcacggatcg ctgcgggcag tggcacccag
     4321 cccaacgaga tcaaccagtt ggtccgccag ttccgtgaaa tgcgaaagat gatgaagcaa
     4381 atgggcggca agggtcggcg ctctggtggc aggccttctg ctggtaaggg ccggggcaag
     4441 ggtcgaaggg gcggaggtgg tcggacgacg gcacttgggc cggcgccgat cgacaagaag
     4501 aagggccttt cgctgcccgg gctgggcgag acgccaggcg gtgtcccagg tggtctcggt
     4561 ctccccggcg agggttcccc ggggaggccg tagggccctc gggtcgggct cctctcgagg
     4621 gtgccgccgg gtttctctgg aagatgtcga acggcatgtc gggcgtcacg gggctgatcc
     4681 ggtcatggag gctggaaaac gacgtggatc ccggcagact ggacgaccga atgggcgcaa
     4741 ctccaccgtg tccagggtcc cccgccagac cgtgcggggg ccagatgaat catcctgact
     4801 gacaagaaag tggtaccgac gtggccgtga agctccgcct catgcggatg ggaaagaaga
     4861 agcagccgac ctaccgggtg gttgccgccg actcgcgcaa ggcgcgaaac ggccgcatca
     4921 tcgaggcagt cggcttctac gacccccgcc gtgatccgtc cgtgatcgag atcgacaacg
     4981 agaaggcggt gggctggttg cgcaacggcg cccagccgac cgagcgtgtc gagaagctct
     5041 tgaagatcac cggagcctgg gacgagttca agggtcagcc tgccggcacc agcgtgactg
     5101 cggcgcccga gccgaagccc gaagtagtgg cgacccctgt cgaggaggcc cctgtcgagg
     5161 aggcttccgt tgaggaggcg gccgttgaag aggccgttga ggaggcgcct gtcgaggatg
     5221 cttccgtgga ggaggcggcc gttgaagagg ccgttgagga ggcgcctgtc gaggaggctt
     5281 ccgtggagga ggcggccgtt gaagaggccg ttgaggaggc gcctgctgag gaagcttccg
     5341 tcgaggaggc ccccgtggaa gaggcggccg ctgaagagac cgtcgaggag gaatcatgag
     5401 cgctgaagcc ccgactgctg agagcgtcct cgagtacctg atcaagacca tcgtcgagca
     5461 gcctgacgag gtccgcatcc aggcttcggg cgacgagcgg tgcacgttct cggtgaccgt
     5521 cgccgacggc gacatgggtc gcgtcatcgg ccgtcgcggc cgggtggcca acgccatccg
     5581 gaccattgtc cgggctgccg cggtcaacga cgagaccgag atcgacgtcg acttcgtcga
     5641 ctgaccgtcc gatggacggt gggccggatc ccgatgggcc agccctgctc gaggttggcc
     5701 gaatcgacaa gccccatgga gtgcgcgggg aggtcgtcgt cagtctgata acccaccgca
     5761 ccgagcgcct cgcgcccgga gccgaactcc agaccgaccg tggtgcgatc acggtggagt
     5821 cgagtcgacc ccaccagcat cggtacctgg tccggtttga ccggattccc gaccgtgagg
     5881 ctgccgacgc gtggcgcggg gtggtgctga gtgcgccgcc gatcgacgac ccggacgacg
     5941 acacgctttg gatccaccag ttgatgggat ccgtggtggt ggaccagcac ggggtcgagc
     6001 acggtgtcgt gacgggggtc ctcgaaaacc cggccagcga ccttctcgag ttggatgatg
     6061 gccgactggt cccgctggtc ttcctgacgg ccttcgagcc gggtgttcgt atcgacgtgg
     6121 acgtgcccgt cggcctcctc gacggcgacg acgttgatcc cgaggttgcc tcggacgctg
     6181 atccggacca gacgccatga cgctccgtgt cgacgtcttc actctcttcc cgggcctcat
     6241 cggggcctac acaggtgaga gcatcctggg ccgggcctcc gacgcaggcc acctcgatgt
     6301 ccgggcacac gacttgcgga tggccgccac cgatgcccat cgcacggtcg acgacagtcc
     6361 gttcggcggg ggagcgggca tggtgatgat gcccgaaccg gtcttcgccg ccgttgaact
     6421 cgtcgaaccc ccgcgaccgc tgatcctgct cagcccggcc ggccgacgct tcgaccagtc
     6481 ggtagccgtg gaactcgccg cgctcgatgg cttctcgctg ctctgcggcc gttacgaggg
     6541 ggtagacgag aggatccgaa ccgagctgtg tgacgacgag ctctcgctcg gcgactacgt
     6601 gttggccggc ggcgaactag ctgccctggc ggtcatcgag gctgtggcgc ggcttcgacc
     6661 cggggtgctg ggaaacagcg cttcgccgga ggacgagtcg ttcaccgacg gtcttcttga
     6721 gtacccgcac tggacccgcc cggccgagtt ccgtgccttg tccgttcccg atgtgctcct
     6781 gtcgggcgat cacgcgaggg tcgcccggtg gcgccgggcc gcagcactag ctcgcacgat
     6841 cgagcgacga ccggacctga tcgaacagcg tggcggcctc accgaggccg accaggacct
     6901 tctcgacgag ttcgggacac ctgacccgaa cgattgagcc agacggcaca acgggcggtc
     6961 ggtcgtcccg gtgtcgtcca cggtcgatgg ccgtatgctt gccgatcggt ctcctcccgt
     7021 ccggggacgg aaccacgaac ggcccgatct gtctgacggg ccacgagcct ctcgaggacg
     7081 agccatgcag cccaccgatc tcgtcgatca ccagaacctc cgggacgacg ttcccgactt
     7141 caacgccggc gatgccctga aggtgcacgt ccgcgttgtt gagggcaacc ggaagcgggt
     7201 gcagctcttc gaaggcgtgg tcatccgccg tcagggcagc ggggtccgtg agacgttcac
     7261 cgtacgcaag ctgagcttcg gcgtcggcgt ggaacggacc ttcccggtcc attcaccgat
     7321 tatcgaccgc atcgaggtcg gggcccgcgg tgacgtccgt cgggccaagc tctactacct
     7381 ccgcgaccgt atcggtaagc gtgccaaggt caaggagaag cgggagttct gatcccgctg
     7441 cggcgttcct gctgagggtc gccgccacat cctgttccct atggtcgctg ccatggtggc
     7501 gattcggcgg gtcggcgtct ggtccagcag cctcggtgcc aatggcgacg catgtcaggc
     7561 acgtcgacag ggacgatgac taagtgtccg agtcccggcg ggatctcccg gttgcagccc
     7621 gggcataggt aggtcttggt ggcctggtag ggatggatga aacgctcttc cagttcgccc
     7681 aggatctcgg ggttgtccat ctcaggaggt cgtcccgcgt gggtggccgg ttggtggttg
     7741 gcaggtcaca ggaagagcgt ccaggcgata aggagtacag ccacgacgac ggcagcaccc
     7801 acgtagagga catcgctggg gcgccggtgg tgggggcgtc gcgggtcaaa tcccatgccg
     7861 tcagtatcgt cgacgttcga tgcgactcca ctgcgctctg ttcctggtat tggccgttct
     7921 cggggcgtcc tgtgccagcc ccccacaggt tcccggggcc gacgacgggt cggcagatcc
     7981 cgctctggta aggggtcggg agatctgggg gaaggcgtgt gcgtcctgcc acggttccga
     8041 cggttccggg ggaagggggc cgtcgctggt ctcggtggag attcggttcc cagtgttggc
     8101 cgaccagctc acagtggtga ccgatggaca gggttccatg ccaggtttca gcggccggta
     8161 cgaccccgag gaactcgagg cggtggtccg ctacacgcgc gaggtgctct gaccacacct
     8221 ggaagaacgc gtttggttgg acgcggtcag gccagtatgt caacgttgcc tagccgggcc
     8281 agaagaagct aaagggtcct cgagcgggca tcccgtacga ggatgatgag gaggggcagt
     8341 tatgcgatca gtaggacgac ggacaatccg agtggtcctc cttgcaattc tggtg
//
LOCUS       DASCMR010000047         4334 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000230707, whole genome shotgun sequence.
ACCESSION   DASCMR010000047 DASCMR010000000
VERSION     DASCMR010000047.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4334)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4334)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4334
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000230707"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..232)
                     /locus_tag="QGG16_01120"
     CDS             complement(<1..232)
                     /locus_tag="QGG16_01120"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HJP23909.1"
                     /translation="MSDPSRFPETRRIPNPGAPLPTGEEKAAAVRSMFDAIAPRYDLV
                     NRIMTFRLDVRWRKRTVRRLSLPDCSTVLDLAC"
     gene            complement(290..625)
                     /locus_tag="QGG16_01125"
     CDS             complement(290..625)
                     /locus_tag="QGG16_01125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23910.1"
                     /translation="MERRWINRMHPQTLASATMLLYIEGIFNLVRGQTLFLVGIAMFP
                     AAWAIANDRRWGWRLGVGTAGVAVFIRLTWYGFGNPMALAFALLFPVVLLALLIHPQS
                     REHQKIWFN"
     gene            complement(638..1831)
                     /gene="rlmN"
                     /locus_tag="QGG16_01130"
     CDS             complement(638..1831)
                     /gene="rlmN"
                     /locus_tag="QGG16_01130"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016433 - rRNA (adenine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HJP23911.1"
                     /translation="MNHSPAADDVETGSSAVRPPRGLSPSRYDPDRAELGRLVAEVGE
                     TAGTALPAYRVDQLWQGLYRDLIGPEDVSTLPKALRGPLANLLPPALTEATRSVGDGG
                     DTIKWLWRLADGSLIETVLMHYKDRSTVCVSTQAGCAMACGFCATGQMGFDRHLSTGE
                     IVEQVVRAQVEAGDRRVSNVVFMGMGEPLANYDRTWAAVRRLHGDLGLSARHLTISTV
                     GVVPGIRRMATEGLPVNLAVSLHAADDGLRDELVPLNRRYPLAELADACQAHVTATGR
                     RLSFEWALIHNVNDRLEDAARLADYARPLGAHVNLIPLNPTPGWPTRGSPPSRVREFA
                     DEVNARGGNATIRRTRGTEIDAACGQLRAERANADSVNADRSVPVAAPGRRGNPTPGG
                     NGSSR"
     gene            complement(1828..2601)
                     /gene="mshD"
                     /locus_tag="QGG16_01135"
     CDS             complement(1828..2601)
                     /gene="mshD"
                     /locus_tag="QGG16_01135"
                     /EC_number="2.3.1.189"
                     /inference="COORDINATES: protein motif:HMM:TIGR03448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035447 - mycothiol synthase activity
                     [Evidence IEA];
                     GO_process: GO:0010125 - mycothiol biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mycothiol synthase"
                     /protein_id="HJP23912.1"
                     /translation="MDRWTVTDGTDTASLSGDPERWLVELNISEPAAPGDPSDERGTN
                     DDRGRRLLEAATQAVVIEGGGRLEYWIERVDERSDEVPTRAGFVPYRDLLRLRRQLPA
                     LPTDLIVRAFRPEDAEAFIECNNKAFDWHPEQGEMTPEDLAAKQAEPWYDPEGFLILE
                     EADADGNDSVIGFCWTKIHTDEKPALGEIYAIAVDPEHHGRGLGRELSLAGLAYLTNQ
                     GLRQAILYVESDNKPARKMYGALGFDREFTSRAYQRIVR"
     gene            2627..3268
                     /gene="nth"
                     /locus_tag="QGG16_01140"
     CDS             2627..3268
                     /gene="nth"
                     /locus_tag="QGG16_01140"
                     /inference="COORDINATES: protein motif:HMM:TIGR01083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HJP23913.1"
                     /translation="MGRPRSIKGRAAEAHRRLGDEYPGAECELDHENPFQLLAATILS
                     AQCTDKRVNMVTPALFAAYPEPVDLAGAVPHELQEIVRSTGFYANKAKSLLGMAQRLV
                     EVFDSEVPSSMADLTSLPGVGRKTANVVRSVALDLPGLPVDTHVGRLSRRLGLTTETD
                     PVKVEMELNPMVPAAQRGEFSLRLILHGRRVCPSRKPRCGECVLQDFCPAAHL"
     gene            complement(3467..3679)
                     /locus_tag="QGG16_01145"
     CDS             complement(3467..3679)
                     /locus_tag="QGG16_01145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23914.1"
                     /translation="MDGSESNEARVDAELSSLASQLEALTRRIEELAAFSVTSADEEA
                     RGRSGLHEVERHLRGALRELARARRV"
     gene            3752..>4334
                     /locus_tag="QGG16_01150"
     CDS             3752..>4334
                     /locus_tag="QGG16_01150"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF013013.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HJP23915.1"
                     /translation="MLRRLDLRGDLPSSPAVLRAALPRPDLGGPGSEDAVLNAVRAIL
                     NDVQARGDEAVRELTSRFDDAEPPTIQVDPVEVAAALDRIDPVVRTALEVAAEAIRRH
                     HVGQVRSEHRTADAGLVVRSVSRPVERAGCYVPGGRAAYPSTVLMTAVPARAAGVDEV
                     VVCVPPDPDGRVAEVTLAAAAVAGVDAVYAVGGA"
BASE COUNT          681 a         1334 c         1526 g          793 t
ORIGIN      
        1 cgcaggccag gtcgaggacg gtcgagcagt ccgggagaga gaggcgtcgt actgtccgtt
       61 tccgccaacg gacgtccagg cgaaacgtca tgatccggtt aaccaggtcg taccgagggg
      121 caatggcgtc gaacatggag cgcaccgcgg cggccttctc ctccccggtg gggaggggtg
      181 cgccggggtt tggaatgcgc ctggtctcag ggaagcggct tgggtcgctc atgtcggttg
      241 ggggaggggt ccttggtggc gagctcgacg cggaaccggt cagctgtgct cagttgaacc
      301 agatcttctg gtgctcccgg ctctgcggat ggattaggag agccagaagt acaacaggaa
      361 acagcagggc gaaggccagg gccatcggat tgccgaaccc gtaccaggtg aggcgaataa
      421 acacggccac tccggcagta cccacaccga ggcgccaacc ccagcgcctg tcattggcga
      481 tggcccatgc cgctgggaac atggcgatac cgaccaggaa gagcgtctgc cctcggacga
      541 ggttgaagat tccctcgatg tacagaagca ttgttgctga cgccagcgtt tgcgggtgca
      601 tgcggttgat ccagcgacgt tccacgtagc cagtctgtca gcggctcgac ccgttacctc
      661 caggggtcgg gttgcctcgg cgtccgggtg ctgcgactgg taccgaccgg tcggcgttca
      721 cgctgtcggc gttagcccgc tcggcacgta actggccgca ggcagcgtcg atctcggtgc
      781 cgcgggttcg gcggatggtg gcgttgccgc cccgggcgtt cacctcgtcg gcgaactcgc
      841 gaacacggga aggtggggat ccgcgtgtcg gccatccggg cgtgggattc agtgggatga
      901 ggttcacatg ggcgcccagt ggacgggcgt agtcggccag tcgggcagcg tcctccagcc
      961 ggtcgttgac gttgtgaatg agggcccact cgaaggagag gcgccgaccg gtggcggtga
     1021 cgtgtgcttg gcaggcatcg gccagttcgg ccaacgggta gcgccggttt aacgggacca
     1081 actcgtcgcg aaggccgtcg tccgccgcat gcaacgacac tgccaggttc accggcagcc
     1141 cctcggtggc catccgacgg atgccgggca ccacgccgac cgtcgagatt gtgaggtggc
     1201 gcgctgacag cccgaggtcc ccgtggaggc gtcggacggc ggcccacgtc cggtcgtagt
     1261 tggccagcgg ttcacccatg cccatgaaga ccacgttgga gacccggcgg tcgccggcct
     1321 cgacttgggc tcgcacaacc tgttccacga tctcgccggt cgagaggtgg cggtcgaagc
     1381 ccatctggcc ggtcgcgcag aagccgcacg ccatggcgca tccggcctga gtgctgacac
     1441 acacggtgga acggtccttg tagtgcatga gcaccgtctc gatgagtgat ccgtcggcca
     1501 gacgccacag ccacttgatg gtgtcgccgc cgtcgcccac cgaccgggtg gcctcggtga
     1561 gagcgggggg aaggagattg gccagggggc cgcgtagagc cttggggagg gtggagacgt
     1621 cctcggggcc gatgagatcg cgatacaggc cctgccagag ttggtcgacg cggtaggcgg
     1681 ggagcgcggt cccggcggtt tcgcctactt cggcgacgag tcggccaagc tcggcacggt
     1741 cggggtcgta gcggctaggg gagagccctc tcggggggcg gactgctgaa gaaccggttt
     1801 ctacgtcgtc ggctgccggg gaatggttca ccggacgatg cgttggtagg cccgactggt
     1861 gaattcgcga tcgaagccga gagccccgta catcttgcgg gccggcttgt tgtcggactc
     1921 cacgtagagg atggcctgac gtaggccttg attcgtcagg taggccagac cggccaacga
     1981 gagttcgcga ccaagacccc gaccgtgatg ctctgggtcc acggcaatgg cgtagatctc
     2041 tccgagcgcc ggtttctcgt cggtgtggat cttggtccag cagaatccga taactgaatc
     2101 gttcccgtcg gcatctgctt cctcgaggat caggaagccc tcggggtcat accagggctc
     2161 agcctgtttg gcggcgaggt cttcgggggt catctcgccc tgttcggggt gccagtcaaa
     2221 ggccttgttg ttgcactcga tgaatgcctc ggcgtcctcg gggcgaaagg cccgcacgat
     2281 taggtcggtg ggcagcgccg gtagctgtct tcgcaggcgc aggaggtcgc ggtagggcac
     2341 gaagccggct cgagtgggga cctcgtcgct gcgctcgtcg actcgttcga tccagtattc
     2401 gagtcgtccg ccaccctcga tcaccacggc ctgggtggcg gcttccagca ggcgacgccc
     2461 acggtcgtcg ttggtgcccc gctcgtcgga cgggtcgccg ggagcggcgg gttcggagat
     2521 gttcagttcg acgagccagc gttccggatc accggagagg ctggcggtat cggttccgtc
     2581 cgtgacggtc caccggtcca tggcgctgag gctaccgtcg cccttcgtgg gacgaccaag
     2641 gtcaatcaag gggcgggccg ccgaggcaca tcgacggctg ggtgatgagt acccgggtgc
     2701 cgaatgtgag ctcgatcatg agaatccgtt ccagcttctg gccgccacca tcctttctgc
     2761 ccagtgcacc gacaagaggg tgaacatggt gacgcctgcc ttgttcgccg catacccaga
     2821 gccggttgac ctagctgggg cggtgcccca cgaactgcag gagatcgtcc gctccaccgg
     2881 cttttacgcc aacaaggcga agagcctgct gggtatggcc cagcgcctcg tagaggtatt
     2941 cgattcggag gtgccgtcgt cgatggccga cctgacgtcg ctgcccgggg tggggcgtaa
     3001 gacggccaac gtggtccgca gcgtggccct cgacctgccg ggcctgccgg tggatactca
     3061 tgttggacga ctctcgcggc ggctgggatt gacgacggag acggatccgg tgaaggtcga
     3121 gatggagctg aatccgatgg tgcccgcggc tcagcgggga gagttcagcc tccgtctgat
     3181 tctgcatggt cgccgggtct gtccgagtcg caagccccgg tgcggggagt gtgtgcttca
     3241 ggacttctgt cccgccgccc atctctgact tcgccggaaa taggcatgat aggggtcact
     3301 cgaaaatagg gatcagaagc cgttcgaacc atccttgcgg tggtgtacgt tcattccgcc
     3361 gggtcccacc acccggccca gcgaggagag ggttcccgcc acccgccttg cccgttcggc
     3421 gcccctcggg gcgtcgaacg acattttggg gccggtttcg aattcctcag actcgtcgag
     3481 cccgggccag ttcccttagg gcgccacgaa ggtggcgttc cacctcgtgg aggcccgacc
     3541 ggcccctggc ctcttcatca gctgaggtga cgctgaaggc cgccagctcc tcgatccgtc
     3601 gagtgagagc ttcgagctgg ctggccaacg acgagagttc cgcgtccacc cgggcttcgt
     3661 tcgattcgga tccgtccata cacgcgagtc tggccgactc cggtttgaaa ccccagccga
     3721 ggccccgtgc ggtggccggt agcgtgacag cgtgcttcga cgactcgatc tccgagggga
     3781 tctgcctagt tctccagcgg tcctgcgggc cgccctgcct cgtcctgatc tgggaggtcc
     3841 gggttccgaa gatgccgtcc tgaacgccgt acgggccatt ctgaacgatg ttcaggcccg
     3901 cggtgacgag gccgtacgcg agttgacatc ccggtttgat gacgctgaac cgccgaccat
     3961 ccaggtcgac ccggtcgagg tagccgccgc cctggaccgc atcgaccctg ttgttcgcac
     4021 ggcgttggag gtggccgcag aagctatccg gcgtcatcac gtgggtcagg tccgttccga
     4081 gcaccggacc gcggatgccg gtctcgtggt gcgctcagtt agtcgccccg tggaacgcgc
     4141 gggttgctat gtccctggag gacgggccgc gtacccctcg accgttctca tgaccgccgt
     4201 tccggcccgg gcggccggtg tcgacgaggt cgtggtgtgc gtaccgccgg atcctgatgg
     4261 ccgcgtcgca gaggtgaccc tcgctgcagc cgcggtggct ggggtggatg ccgtctacgc
     4321 ggtgggtggc gctc
//
LOCUS       DASCMR010000048         2777 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000235591, whole genome shotgun sequence.
ACCESSION   DASCMR010000048 DASCMR010000000
VERSION     DASCMR010000048.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2777)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2777)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2777
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000235591"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..991)
                     /locus_tag="QGG16_01155"
     CDS             complement(<1..991)
                     /locus_tag="QGG16_01155"
                     /inference="COORDINATES: protein motif:HMM:NF013775.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HJP23916.1"
                     /translation="MTTPAGIDHDNLVRWFDGAVGGLDGGSLTFELITGGRSNLTFKV
                     SDGVAADDGGRHWVLRRPPMGHVLATAHDMAREHRIISSLAESGVPVPGIVGLCTDSE
                     VNGAPFYVMDFVPGVIVRNVEEAEKVPLEVRTRMGESLVEVLARLHDVDLDAVGLADL
                     GRHEGYIDRQLKRWRTQFEDATTREVPGVLETHEILASRVPAQQGAGIVHGDYRLDNC
                     MMSTDGEVVAVLDWELCTLGDVLADVAGMIAYTDDRTTGGTPPPTSIEGFPDVDGIRE
                     AYARHSSRDLTHLDFYVAFAYWRIACIVEGVYTRYAAGVMGDQDDPRLIAVFGQ"
     gene            1057..1758
                     /locus_tag="QGG16_01160"
     CDS             1057..1758
                     /locus_tag="QGG16_01160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HJP23917.1"
                     /translation="MDVTDATFQTEVIDRSAQVPVVIDLWAEWCGPCKSLGPILEKVI
                     AEQGGKVVLAKVDIDANPGVAQAFQVQSIPAVFGMVDGQVAASFVGAQGEDAVRTFVE
                     GLLPGEEVSEIDRLIAIGDEGSLIAALGIESDNVAAVTALALLLVERAGEGDQDAALK
                     LLERIPESADTRRIAAMARTEAVDDVEATLAELLTAVKADEDARQRFVDLLEVLGPDD
                     ERTPVWRRRLTSALF"
     gene            1834..2757
                     /gene="folP"
                     /locus_tag="QGG16_01165"
     CDS             1834..2757
                     /gene="folP"
                     /locus_tag="QGG16_01165"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR01496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HJP23918.1"
                     /translation="MPEPANPIRGRVVDLLSNRTPTPARCTVDWVIVELGPDHRYDCT
                     HRSLVMGILNRTPDSFWDRGRFWEFDDFLRLAEAHEANGADLFDVGGSKAGPGPEVTR
                     DEEMERVVPAVEALHARFDLPIAVDTFRGSVADAAMEAGACVGNDISGFADPTFLPAC
                     ARHGATVVATHVRIGPRIPDPTPRYDDVVADVREFLAERVRWATEAGIPAGRIIIDAG
                     LDLGKTPDMSIELLRRSGDLTTLGQPILLSASNKGFLGEVTSNGLEDRVEASWAAHAL
                     GISGGCRILRAHDVRGARRVADVMANVMAPV"
BASE COUNT          462 a          903 c          934 g          478 t
ORIGIN      
        1 gttgaccgaa cactgcgatc agccggggat cgtcctggtc acccatgacg cccgctgcgt
       61 accgggtgta aaccccctcg acgatgcagg caatacgcca gtaggcgaaa gcgacgtaga
      121 agtcgagatg tgtcaggtcg cgactggagt gtctggcgta ggcctcgcgg atcccgtcga
      181 catcaggaaa gccctcgatt gaggtcgggg gaggagtgcc gccagtcgtg cggtcgtcgg
      241 tatacgcgat catgcccgcc acgtcggcca gcacgtcgcc gagcgtgcac aactcccagt
      301 ccagcacggc gaccacctcg ccgtcggtgg acatcatgca gttgtcgagg cggtagtcgc
      361 cgtggacgat gccagcgccc tgctgagccg gcacccgcga cgccaggatc tcgtgggtct
      421 ccaatacccc ggggacttcc cgggtggtcg catcctcgaa ctgggttcgc cagcgcttca
      481 gttgccggtc gatatagccc tcgtgccgtc caaggtcggc cagtccgaca gcgtccaagt
      541 cgacgtcgtg gaggcgggcc agtacctcaa ccagcgactc gcccatccgc gttcgtactt
      601 cgaggggcac cttctcggct tcctccacgt tgcggacgat cacaccggga acgaagtcca
      661 tgacgtagaa cggggcgccg ttcacctcac tgtcggtgca caacccgacg atcccgggca
      721 cgggtacgcc gctctcggcc agcgagctga taatccggtg ttcgcgggcc atgtcatggg
      781 cggtggccag cacgtggccc atcgggggac gacgcaatac ccagtggcga cctccgtcgt
      841 cggccgcgac accgtcggag actttgaacg tcaggttgga ccggccaccg gtgatcagct
      901 cgaaagtgag cgaaccgcca tccagcccgc cgaccgcccc atcgaaccag cgcaccaggt
      961 tgtcatggtc gattccggca ggcgttgtca tcgggaggaa cggtagtcgg ggtgtgggac
     1021 gaggggcgca ccgtgcctgc ccctaccctc aggggcatgg acgtcactga cgcgacattt
     1081 cagacagagg tcattgatcg gtctgcacag gttccggtcg tcatcgacct gtgggctgaa
     1141 tggtgtggcc catgcaagtc cctaggcccg atcctcgaga aggtcattgc cgaacaggga
     1201 ggcaaggttg ttctggccaa ggtggacatc gacgccaacc ccggcgtggc ccaggcgttc
     1261 caggtgcagt ccatcccggc ggtgttcgga atggtcgacg gccaggtagc tgcgagtttc
     1321 gtcggcgccc agggcgaaga cgcggtccgg acattcgttg agggcctgtt gccaggtgaa
     1381 gaggtgtctg agatcgaccg gctgatcgcc attggcgacg aggggtcgct cattgccgct
     1441 ctgggtatcg agagtgacaa tgtcgccgcg gtgaccgctc tggccctcct actagttgag
     1501 cgggccggcg agggcgacca ggacgctgcc ctcaagttgt tggaacgaat ccccgagtcg
     1561 gccgacactc gtcggatcgc tgcgatggcc cgcaccgagg cggtcgacga cgtcgaagcg
     1621 acgttggctg agctcctgac ggccgtcaag gccgacgaag atgcccggca gcggttcgtc
     1681 gacctgctcg aggtcctcgg accggacgac gaacgcaccc cggtgtggcg gcgtcgactg
     1741 acatcggccc tcttctagca gagcctcttc aggcgacacg gtcgtcgcca ctcacggggc
     1801 ccctcggttg acgcaaccgt tcgtgggtgt ggcatgcccg aacctgccaa tccgatccga
     1861 ggccgggtcg tcgacctgct ttccaaccgg acgccgaccc cggcccggtg taccgtcgac
     1921 tgggtgatcg tcgagttggg ccccgaccac cgctacgact gcacccaccg gtcgctcgtc
     1981 atgggaatcc tgaaccgcac cccggactcg ttctgggatc gcggacggtt ctgggagttc
     2041 gacgacttcc tccggttggc cgaggcccat gaggccaacg gcgctgacct gttcgacgtc
     2101 ggcggctcca aggccggtcc ggggcccgag gtgacccggg acgaggagat ggaacgcgtg
     2161 gtgccagccg tagaggccct gcatgcccgg ttcgacctac ccattgccgt ggacacattc
     2221 cggggttccg tggccgatgc ggccatggag gccggcgcgt gcgtgggcaa cgacatcagt
     2281 ggattcgctg atccgacgtt tcttccagcg tgcgcccgcc acggtgcgac ggtggtcgcc
     2341 acccacgtac gtatcggtcc gaggattccc gacccgacgc cgaggtacga cgacgtggtg
     2401 gccgacgtcc gcgaatttct ggccgagcgc gtccgctggg cgaccgaggc cgggatcccc
     2461 gccgggcgga tcatcatcga cgcaggcctc gacctcggca agacgcccga catgtcgatc
     2521 gaactcctcc ggcgttccgg ggacctgacc accttgggtc agcccatcct gttgtcggca
     2581 tccaacaagg gattcctcgg cgaggtgacg agcaacggcc tggaggatcg ggtcgaggca
     2641 tcgtgggcgg cccacgcgct gggcatcagc ggcggctgtc ggatccttcg ggcgcatgac
     2701 gtccggggcg cccggcgggt ggctgacgtg atggccaatg tcatggcccc tgtatgagca
     2761 tgcctgccat cgtgttg
//
LOCUS       DASCMR010000049         1737 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000236787, whole genome shotgun sequence.
ACCESSION   DASCMR010000049 DASCMR010000000
VERSION     DASCMR010000049.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1737)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1737)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1737
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000236787"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..346)
                     /locus_tag="QGG16_01170"
     CDS             complement(<1..346)
                     /locus_tag="QGG16_01170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HJP23919.1"
                     /translation="MAGPISAHLLPDTADVADDGRLSIGGCDLVDLADQFGTPLFVYD
                     EDHLRARCREAVVAFGDGVAYAAKAFLCGAMARLAYEEGMHLDVATGGELFVARHAGV
                     PGERLVMHGNNKS"
     gene            complement(349..>1737)
                     /gene="argS"
                     /locus_tag="QGG16_01175"
     CDS             complement(349..>1737)
                     /gene="argS"
                     /locus_tag="QGG16_01175"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR00456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HJP23920.1"
                     /translation="HLADSWLHDVLADVVTAGTDGWARVDEGDGTRVIVEFVSANPTG
                     PLHAGHGRGACYGDSVARLYERCGYEVVREFYINDRGLQMQNFAASLAARAAGHDVPE
                     DGYHGQYIIDWAAEMHAESGDAADPMEWGYARALAAHQDVLESLSIHFDSWFSERSMI
                     ASGAIDATLSDLRAAGAVFEDGGAVWLRSTEHGDDKDRVLIKSDGEPTYLMPDVAYHR
                     DKFGRADRLVNVFGADHHGYVARMHAAMALLGHDPAELEIAITQLVNLQRDGREVRLS
                     KRTGEMVELAEVVEEVGADAARFTYLLLSVDSSQTFDMDLVSRQVNENPVFYVQYAHA
                     RIHQIMQRATGAGIDRGSLDEADLTLLVHPRELEVLRSLHELPDVVARARRERAPHQV
                     TTWVRDLSSSFHGFYHDCRVLGDGIDLTLTVARLWLAEGARIGLAVALDLLGVGAPTE
                     MWRDEQRVGERV"
BASE COUNT          315 a          594 c          553 g          275 t
ORIGIN      
        1 cactcttgtt gttgccatgc attacgagac gttcgccggg cacccctgcg tggcgggcga
       61 cgaagagttc gccacctgtg gccacgtcga ggtgcatgcc ctcctcgtag gccaagcggg
      121 ccatggcccc acaaaggaaa gccttggcgg cgtaggccac accatcgccg aatgcgacca
      181 cggcctcgcg acagcgggcc cgcaagtggt cctcgtcgta gacgaacaga ggcgtgccga
      241 actggtcggc caggtccacg aggtcgcagc cgccgatgga cagcctcccg tcatcggcaa
      301 cgtccgccgt gtcgggcagg aggtgggcgg agatgggacc ggccatgatc agacccgttc
      361 ccctacgcgt tgctcgtcgc gccacatctc ggtgggggca cccacgccca gcaggtctag
      421 cgccacagcc aggccgatcc gagcgccctc ggccagccac aggcgggcca cggtaagcgt
      481 cagatcgatg ccatcaccaa gcacccgaca gtcgtggtag aagccgtgga atgatgacga
      541 caggtctcgc acccaggtag tgacctggtg gggcgcccgc tcacgacggg cccgtgccac
      601 cacgtcggga agctcatgga gggagcggag cacctcgagt tcgcgggggt ggaccagcag
      661 cgtcaggtcg gcttcgtcca gtgacccgcg gtcgattccc gcgccggtgg cccgctgcat
      721 gatctggtgg atccgggcgt gcgcgtactg cacgtagaag accggatttt cattgacctg
      781 gcgagacacc aggtccatgt cgaaggtctg gctcgagtcg accgacaaca ggaggtaggt
      841 gaagcgagcc gcgtcagctc ccacctcctc gaccacctcg gccaactcga ccatctcacc
      901 ggtgcgcttg gacaggcgga cctctcgacc gtcgcgctgc aggttgacaa gctgcgtgat
      961 ggcgatctcc aactcggcgg gatcatgacc gaggagcgcc atggccgcat gcattcgtgc
     1021 cacgtaaccg tggtgatccg caccaaacac gttgaccagg cggtcggctc gaccgaactt
     1081 gtcccggtgg tatgccacgt ccggcatcag gtaggtgggc tcaccatcac tcttgatgag
     1141 tacccgatcc ttgtcatctc catgctcggt gctgcgcagc cacaccgctc cgccatcttc
     1201 aaacaccgcg ccagcggccc gcaggtccga gagggtggcg tcgatggccc ccgaggcgat
     1261 catcgagcgt tcgctgaacc acgaatcgaa gtgaatagac agggattcga gcacgtcctg
     1321 atgggcggcc agcgcccggg cgtaacccca ctccatcggg tccgcagcat cgccggattc
     1381 ggcgtgcatc tcggccgccc agtcgatgat gtactgcccg tggtaaccat cctcgggcac
     1441 gtcatgacca gccgcacggg ccgccaacga tgcggcgaag ttctgcatct gcagcccacg
     1501 gtcgttgatg tagaactcgc gcaccacctc gtacccgcac cgttcgtaga ggcgggccac
     1561 cgaatccccg tagcaggcgc cccggccatg gcctgcgtgc aggggcccgg tcgggttggc
     1621 gctcacgaac tcgacaatca cccgggtgcc gtcaccctcg tcgacccggg cccaaccgtc
     1681 ggtcccggcg gtgaccacat cggccaagac gtcgtgcagc cacgaatcgg caaggtg
//
LOCUS       DASCMR010000050         2592 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000240626, whole genome shotgun sequence.
ACCESSION   DASCMR010000050 DASCMR010000000
VERSION     DASCMR010000050.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2592)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2592)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2592
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000240626"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..504
                     /locus_tag="QGG16_01180"
     CDS             <1..504
                     /locus_tag="QGG16_01180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23921.1"
                     /translation="PAKKAPAKKAPAKKAPAKKAPAKKAPAKKAPAKKAAAANRPKTP
                     FGKKFLDEQKAALIAERARYVLSADNLQAEADALLEDRDPGDVQFDGESGEGDTLAVE
                     RDLDLALSAQAREAVDEIDAALDRIRKGVYGVCVKSGKNIPRERLEIIPWASQRVEFK
                     AGGLGRR"
     gene            555..974
                     /gene="lspA"
                     /locus_tag="QGG16_01185"
     CDS             555..974
                     /gene="lspA"
                     /locus_tag="QGG16_01185"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: protein motif:HMM:TIGR00077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HJP23922.1"
                     /translation="MAVVGLDQLTKWWALHALDDRSIDLVWTLRLHLVHNTGAAFSRG
                     EGFGPLLAGLVVVVMLLLVRYAVRTDDPVIHITVGAIAGGALANLLDRVFRAHDGLLS
                     GAVVDFVDLQWWPVFNLADAVIVVGGILMVLRGWIRG"
     gene            967..1977
                     /locus_tag="QGG16_01190"
     CDS             967..1977
                     /locus_tag="QGG16_01190"
                     /inference="COORDINATES: protein motif:HMM:TIGR00005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HJP23923.1"
                     /translation="MADVPSESIDDGEDEPLLDETVPVALDGERIDRVVALLADVSRN
                     RAGIAIAAGSVRLDGAVVTQRSRKVRADEELVVDGLEREAVHVPEGDATVVVSVLYDD
                     DDVIVVDKPSGLVVHPGAGNMEGTLVNGLLARYPEMAGVGSTVRPGIVHRLDLGTSGA
                     LAVARTQVAYDSLVGQLAERTVGRRYLALVWGRPEAPTGVVDAPIGRSTKDRTRMAVI
                     GSGRPARTHYDVEETRVEPVTSLLRCRLETGRTHQIRVHLSAIGHPLVGDRAYGGERE
                     GLPEGSPLDRPFLHAAHLAFDHPVTGERMAFDAPLPVDLLGLLERLGPPEPNEADPEA
                     RD"
     gene            complement(2010..2450)
                     /locus_tag="QGG16_01195"
     CDS             complement(2010..2450)
                     /locus_tag="QGG16_01195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HJP23924.1"
                     /translation="MKVSTRGDYASRALLSLALHGDGQTPRSVREVADITSLPQPYLE
                     QILLALKGAGLVRSKRGVGGGYVLAREPKTILLSQIVAAVDGPIVVGDFADPHTGGAC
                     DHEGQCVLLSIWASAGSHMQQYLDSFTLEDIAGMSRGESSWPDG"
BASE COUNT          444 a          816 c          878 g          454 t
ORIGIN      
        1 ccagccaaga aggccccagc caagaaggcc ccagccaaga aggccccagc caagaaggcc
       61 ccagccaaga aggccccagc caagaaggcc ccagccaaga aggctgcggc cgcgaatagg
      121 ccgaagaccc cgtttggtaa gaagttcctg gacgagcaaa aggccgcact tattgcggag
      181 cgggcccggt acgtcctgag cgctgacaac ctccaagccg aggcggatgc gcttctcgag
      241 gaccgtgacc cgggcgacgt ccagttcgat ggtgagtctg gcgagggcga cacactggct
      301 gtagagcgtg acctcgatct ggcccttagt gcccaggccc gagaggctgt cgatgagatc
      361 gacgccgctc tggaccggat ccgcaagggc gtctacggcg tctgcgtgaa gtccgggaag
      421 aacattccaa gagaacgcct cgagatcatc ccgtgggcat cccagcgggt cgagttcaag
      481 gccgggggac tgggccgccg gtgatttccg gcgccggcct tcctggccgg tggacggcgc
      541 ccgcatgtgt cgggttggct gtcgtcggcc tcgatcagct caccaagtgg tgggcgctcc
      601 atgcgctcga cgatcggtcc attgatctcg tctggacgct gcggctgcat ctagtccaca
      661 acaccggcgc ggcgttcagc cgaggagagg gcttcgggcc gcttctggca ggtctggtcg
      721 tcgtcgtaat gctcttgctg gtccgatatg cggtgaggac cgacgatcca gtcatccaca
      781 tcacggtggg cgctatcgca ggcggagcgt tggccaacct gctcgaccgc gtgttccgtg
      841 cccatgacgg cctgttgtcc ggggccgtcg tcgacttcgt tgacctgcag tggtggccag
      901 tgttcaactt ggctgacgcg gtgatcgtgg tcggtggaat cctgatggtc ttgcgaggat
      961 ggatccgtgg ctgatgtgcc gagtgaatcg atagacgacg gggaagacga accgctcctc
     1021 gacgagaccg tcccagtagc actggacggg gaacggattg atcgggtggt cgcactgctg
     1081 gctgacgtca gtcgcaaccg ggccggcatc gccatcgccg ccggctcggt tcgtctggac
     1141 ggcgcggtag tcacccagcg ctcccggaag gtccgtgccg acgaggaact agtggtcgac
     1201 ggcctggagc gtgaggcggt gcacgtaccc gagggtgatg ccacggtggt cgtgtcggtg
     1261 ctgtacgacg acgacgacgt catcgtggtc gacaagccgt ccggtctggt ggtccatccg
     1321 ggcgccggca atatggaagg gacgctcgtc aacggcctgc tggcccgtta tccggagatg
     1381 gccggggtgg gctctactgt ccgaccgggc atcgtccacc ggctggacct cggtacgtcc
     1441 ggcgcactcg ccgtagcccg gacccaggtg gcctacgact ccttggtggg ccagttggcc
     1501 gaacgcaccg tagggcgtcg ctaccttgcc ctggtctggg gtcgacccga agcccctacc
     1561 ggcgtggtcg acgccccgat tggccgttcc accaaggaca ggactcgcat ggccgtaatc
     1621 ggttccggtc gtcctgcccg cacccactac gacgtggagg agacaagggt tgaaccggtg
     1681 accagtcttc tgaggtgccg actggagacc ggccggaccc accagatacg ggtccatctg
     1741 tcggccattg gccatccact ggtcggtgac cgggcctacg gtggcgaacg ggagggcctc
     1801 cccgaggggt cgccgctgga tcgaccgttc ttgcacgccg cacatctggc attcgaccac
     1861 ccggtaactg gagagcggat ggccttcgat gcaccgttgc ctgtcgattt gctcgggctt
     1921 ctcgagcgtc tgggcccgcc tgaacctaat gaagcggatc ctgaagccag agactgaact
     1981 cggcttcagg gccagtttct gaagccgatt tagccgtccg gccaggaaga ttcaccccga
     2041 gacattccgg cgatgtcctc caaagtgaac gagtccagat actgctgcat gtggcttccg
     2101 gcgctagccc agatggatag cagaacacac tgaccctcgt ggtcgcatgc cccgccagta
     2161 tgcgggtcgg cgaagtcgcc aaccacgatc ggaccgtcca cggctgccac gatctgggac
     2221 aggaggatcg ttttgggctc tcgggctagc acgtagccac cacccacccc gcgctttgag
     2281 cggactagtc cggccccttt gagggccagg aggatctgtt ccaagtacgg ctgggggagg
     2341 ctggtgatgt cggccacctc gcgcaccgac cggggcgtct ggccgtcgcc gtggagggcg
     2401 agcgacagga gggcgcggct ggcgtagtcg ccacgcgtcg agaccttcac ggcggctgat
     2461 cctaggcggc ttccatgtac acgggccccg tcgaccggtg tgggtcgccc ccggtgtagg
     2521 ttgcaggacg atgaccgaag agcaccccac ccccgatccc gtggtgcccg attacggcga
     2581 cgcctgtgtg ac
//
LOCUS       DASCMR010000051         4891 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000242978, whole genome shotgun sequence.
ACCESSION   DASCMR010000051 DASCMR010000000
VERSION     DASCMR010000051.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4891)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4891)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4891
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000242978"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..267
                     /locus_tag="QGG16_01200"
     CDS             <1..267
                     /locus_tag="QGG16_01200"
                     /inference="COORDINATES: protein motif:HMM:NF026098.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase dimerization
                     domain-containing protein"
                     /protein_id="HJP23925.1"
                     /translation="LLAEALMAAGIAEGLPADVAVTLTEQTLLGAATLLKASDDPPAI
                     LRENVTSKGGTTAAGLAVFEAAGFRDLVADVVAAAAARSRELGA"
     gene            260..1177
                     /locus_tag="QGG16_01205"
     CDS             260..1177
                     /locus_tag="QGG16_01205"
                     /inference="COORDINATES: protein motif:HMM:NF014003.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent chlorinase/fluorinase"
                     /protein_id="HJP23926.1"
                     /translation="MPDRAGTMGQRLDTVSFLSDYGTDDEFVGVVHSVVASVAPHVRI
                     VDVTHGIAPHDVRAGGLALARSAQYLCPGVVLAVVDPGVGTTRRGIAVEVGGGQSVLV
                     GPDNGLLAPAVAMVGGADRAVSLTDPAWHLPSQGTTFDGRDVFAPVAAHLACGVDLDE
                     LGESIDPNGLLPAVVSAAAVETDGLHAEVWWIDRFGNVQLNAGPEDLDELAGDPSVDR
                     FRVRIADRVLPARRVSAFDEVAPGGLGLLVDSTGLVSLVMCRMSAAADLGLGPSDPVV
                     VEVADGPASGVTTAVSLGVRPESTPRGES"
     gene            complement(1286..2020)
                     /locus_tag="QGG16_01210"
     CDS             complement(1286..2020)
                     /locus_tag="QGG16_01210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23927.1"
                     /translation="MNMQSPVAAASMLVSLAFAVTVLERWIDRRRPQDLAWATSLGLF
                     AAGAAALWWGASIGWSEGSFRAFYAFGAVLNVPILALGTVYLLASRRTANRIALATVL
                     ACAFAAGIVMAAPLADSPHGVAEVFATDELPQGSEVFGAGPRVAAALASSVGALVVIV
                     GSLWSMMRLGRIGGPAARRGATGNGLIVAGALVLSWGGLLNSVLDEMTGFAVSLLVGI
                     SLIFAGALTATESRSPAGSRPVTPPT"
     gene            2113..2808
                     /locus_tag="QGG16_01215"
     CDS             2113..2808
                     /locus_tag="QGG16_01215"
                     /inference="COORDINATES: protein motif:HMM:NF003992.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0045892 - negative regulation of
                     DNA-templated transcription [Evidence IEA];
                     GO_process: GO:0051775 - response to redox state [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensing transcriptional repressor Rex"
                     /protein_id="HJP23928.1"
                     /translation="MSRNDGSMNGGSDRREVIPEATVARLPVYLRGLVELADSGMATV
                     SSVELADLAGVNAANVRKDLSYLHAHGTRGVGYQVDHLIGEISLALGGGEPSPVVIVG
                     IGNLGRALSQYDGFVAGGFPVAGLVDADPAVVGRHIGGRVVRPVEELADVVAESGCTV
                     GIIATPSTSAQEAADHLVAAGVPSILNFAPAVVHVPEDVDLRQVDLATELQILGYHQH
                     RRMASGANAGAVG"
     gene            2973..4232
                     /locus_tag="QGG16_01220"
     CDS             2973..4232
                     /locus_tag="QGG16_01220"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: protein motif:HMM:NF000744.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008883 - glutamyl-tRNA reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HJP23929.1"
                     /translation="MSVVAVGLNHRTVPLDLLERMTVPASRLPKALADLTSRENVTEA
                     VVLSTCNRIEVYAFAEKFHGAYQDIRNFFAETSHVAPEEFSDHLVGLFDGDAARHLFS
                     VASGLDSAVLGEHEILGQVRTSWETAAAEGAVGPVLNPLFRHALEVGKRVRTETAISR
                     NITSVSQAAVAMATDRLGTLEGRQVMVVGAGEMGEGLARALHGGGVASILVANRTWER
                     AVDVAKRLGGTAVRLDDLPRLLPEVDVLLTSTGASSVILEHGDLASVVGEREGRELLV
                     VDIAVPRDVDPAAGEIDGLTLLDMDDLRAFADAGIRERQREVTAVQAIVDAELDRYVD
                     ESTARSVAPLVTSLRGRGEDVQKGELERLAARLGDLDERQREAVEALAAGIVGKLLHE
                     PTIRMKDAAGTARGERLAEALRDLFDL"
     gene            4241..>4891
                     /gene="hemC"
                     /locus_tag="QGG16_01225"
     CDS             4241..>4891
                     /gene="hemC"
                     /locus_tag="QGG16_01225"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: protein motif:HMM:TIGR00212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004418 - hydroxymethylbilane synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HJP23930.1"
                     /translation="MHVRAATRGSALARWQADRLSALIVATRPGTTVEIVVVETTGDL
                     DRTTPLEEMGGQGVFVKEVQAAVLEGRADVAVHSAKDLPALTPDALVLAAVPERADPR
                     DALVGCRFDDLAAGAVVATGSIRRRAQLAHWRPDLEFASLRGNIGTRLAKLDGADGFA
                     AIVVAVAALDRLGLTPAVVDPLDQSVLLPQVGQGALAVECRSDDGSFLELLAAVDDP"
BASE COUNT          733 a         1599 c         1713 g          846 t
ORIGIN      
        1 ctgctggccg aggctctcat ggccgccggc atcgccgagg gcctgcccgc cgacgtggcc
       61 gtcaccctca ccgaacagac cctgctgggg gcggccacac tgctcaaggc ctctgacgat
      121 ccgccggcca tcctgcggga gaacgtcacc tccaaggggg gcaccacggc tgccggcctg
      181 gccgtcttcg aggcggccgg attccgggac ctagtggccg atgtagtcgc cgcggcggcc
      241 gcccggtcgc gagaactggg tgcctgaccg ggcggggacc atgggccagc gactcgacac
      301 cgtctccttc ctctcggact acggcaccga cgacgagttc gtcggcgtag tccattcggt
      361 ggtggcctcg gtggctcccc acgtgcggat cgtggacgtc acccacggaa tcgcccccca
      421 cgacgtgcgg gccggtggcc tagctctggc tcgcagtgcg cagtacttgt gccccggcgt
      481 ggtcctggcc gtggtcgatc ccggtgtggg tacgacccgc cgaggcatag ccgtcgaggt
      541 gggtggtgga cagtcggtcc tcgtcgggcc cgacaacgga ctactggctc cagcggtcgc
      601 catggtgggt ggagccgacc gggcggtctc gctgaccgat cccgcctggc accttccgtc
      661 ccagggcacg acgttcgatg gtcgagacgt gttcgcacca gtggccgccc atctggcctg
      721 cggggtcgat ctcgacgagt tgggtgaatc gattgatccc aacggcctac tccccgccgt
      781 ggtctcggcc gccgcggtcg agaccgatgg cctgcacgcc gaggtttggt ggatcgaccg
      841 gttcggcaat gtccagctca acgccggccc cgaggatctc gacgaattgg ctggcgaccc
      901 gtcagtcgac cgatttcggg tccggatcgc tgaccgggtg ctgcccgccc ggcgggtcag
      961 cgcatttgat gaggtggctc cggggggtct cggactgctg gtcgactcga ccggcttggt
     1021 gtcgctggtg atgtgccgca tgtcggccgc tgccgacctc gggctaggac cgtccgaccc
     1081 ggtggtggtc gaggtggcgg atgggccggc cagcggtgtg accaccgcgg tcagtctcgg
     1141 tgtgcgaccc gaatccacac cgcgaggtga gtcctgatgc gtctgggaac cacgatcgtc
     1201 accgcactgc ttttgttggt catcctcggg gccgccgtcg tccagttcgt cctgctggtc
     1261 gactgacccg ggaccggcgt gccgatcagg tgggcggggt cacaggcctt gagccggcgg
     1321 gggaccttga ttctgtggcg gtgagtgccc cggcgaagat cagcgagatg cccacgagca
     1381 gtgacacagc aaagccggtc atctcatcga ggaccgagtt gagcaggcca ccccagctaa
     1441 gcacgagggc cccggccacg atcaggccgt tgccggtcgc tccccgccgg gccgccggcc
     1501 ccccgatccg gccaagacgc atcattgacc agagggaccc gacgatcacg accaacgctc
     1561 ccaccgatga ggccagggcg gcggctaccc ggggcccggc accgaacacc tccgatccct
     1621 gcgggagttc gtcagttgcg aacacttccg cgacaccgtg gggtgagtcg gcgaggggtg
     1681 cggccatcac gatcccggcg gcgaacgcac aggccagcac ggtcgccagg gcgatccggt
     1741 tggcggttcg ccgggacgcc agcaggtaca cggtccccag ggccaggatc ggtacgttca
     1801 ggacggctcc gaaggcgtag aacgcacgga acgaaccttc cgaccagccg atcgacgcgc
     1861 cccaccagag ggcggcggcg ccagcggcga acagtccgag ggaggttgcc caggcaaggt
     1921 cttgaggccg gcgtcggtcg atccagcgct cgaggaccgt gacggcgaag gccaacgaga
     1981 cgagcatgga cgccgcggcg accggagact gcatgttcac agtggtcaac ggtattggtc
     2041 cgtcgtcccg gcccggttcc cgcaagatgc cggtgtcatg tgaatcggtg cacaagcgcg
     2101 tagttttggc ccgtgtccag aaacgacggg tcgatgaacg gcgggtcaga tcggcgcgag
     2161 gtcattcccg aggccacggt tgcccgtcta cccgtctact tgcgcggcct ggtcgagttg
     2221 gctgattccg gcatggccac cgtgtcctca gtcgagttgg ctgatctggc tggagtcaac
     2281 gccgccaacg tacggaagga cctctcctac cttcacgccc acggcacccg gggcgtcggc
     2341 taccaggtcg atcacctcat cggtgagatc agcctggcac tggggggcgg cgagcccagt
     2401 ccggtggtca tcgtcgggat cggcaacctg ggtcgggctc tgagccagta cgacgggttt
     2461 gtggctggtg ggttcccggt ggccggcctc gtcgatgccg acccagccgt ggtgggcagg
     2521 cacatcggcg gtcgtgtggt gcgcccggtc gaggaactgg cggacgtcgt cgccgaatca
     2581 ggatgcacgg tgggcatcat cgccacaccg tcaacttccg cccaggaagc ggccgaccat
     2641 ctggtggccg ccggtgtccc ctcgatcctc aacttcgctc cagcagtcgt ccacgtgccc
     2701 gaagacgtcg acctccggca ggtcgacctg gctaccgaac tgcagatcct cggctaccac
     2761 cagcatcgtc ggatggccag cggagccaac gccggggctg tcgggtgatc ggtattggag
     2821 tggtgcggcc cgggggttgg aaggcaaccc ctccatcggg aatgctggtg tccctgacgg
     2881 cgccggacgt cgtctcagtc cagtcaatcc attcacctcg aaactggcac cccgggcttc
     2941 cggtggttcc ggagaatcag gagtagcgag ccttgtcggt tgtcgccgtc ggcttgaacc
     3001 accggaccgt tcctctcgac ctgctcgagc ggatgacggt gcccgcttcc cgtctaccca
     3061 aggcgttggc ggatctcacg tcgcgtgaga acgtcactga agccgtggtg ctctcgacct
     3121 gtaaccgcat cgaggtgtac gcctttgcgg agaaattcca cggcgcgtat caggacatcc
     3181 gtaacttctt cgccgagacc tcacacgtgg cccccgagga attctccgac cacctcgtcg
     3241 ggctgttcga cggtgacgcg gcccgtcacc tcttctcggt ggcgtccggt cttgattcag
     3301 cggtcctggg agagcacgag atcctcgggc aggtccgtac atcgtgggag acggcggccg
     3361 ccgagggcgc cgtcggcccg gtgctcaacc cgctgttccg tcatgcactc gaagttggca
     3421 agcgggtgcg aaccgagacg gctatctcta ggaacatcac ctcggtctca caggccgcgg
     3481 ttgccatggc caccgatcgc ctaggcactt tggagggccg ccaggtcatg gtggtcggcg
     3541 ctggtgagat gggcgagggc ctggcccgtg ccctgcacgg tggcggcgtc gcctccatcc
     3601 tggtggcgaa ccgcacttgg gaacgggctg tcgacgtcgc caagcgtctc ggtgggaccg
     3661 cggtccgtct cgatgacctg ccccgccttc tgcccgaggt cgacgtgctg ttgacgtcca
     3721 ccggtgcgtc gtcggtgatc ctcgaacatg gtgatctggc ttcggtggtt ggtgaacgcg
     3781 agggtcgtga gctgctggtc gtcgatatcg cggtgccccg tgacgtcgat ccggccgccg
     3841 gggagatcga cggactgacc ctgttggaca tggacgactt gcgggccttc gccgatgcgg
     3901 gaatccggga acgccagagg gaggtcacag cggttcaggc catcgtggat gccgaactgg
     3961 atcgttacgt cgacgagtcg actgcccgct cggtcgcccc gctggtgacc agcctgcgtg
     4021 gtcgcggcga ggacgtccag aagggtgagt tggagcgtct ggccgctcgt ctgggcgacc
     4081 tggacgaacg ccaacgcgag gccgtcgagg cactggctgc cggcatagtc ggcaagctcc
     4141 tgcatgagcc gaccattcgg atgaaggacg ccgcgggcac cgcccggggc gagcgcctag
     4201 ccgaggccct gcgcgacctc ttcgacctgt agcggccggt atgcacgtcc gtgcggcgac
     4261 ccggggcagc gcactggcgc gctggcaggc cgatcgcctg tctgccctga tcgtggcgac
     4321 tcgaccgggc actaccgtcg agattgtggt cgtcgagacc accggggatc tggatcggac
     4381 cactccgctg gaggagatgg gcggccaggg cgtgttcgtc aaggaggttc aggccgcggt
     4441 gcttgaaggc cgggccgacg tggccgtcca ctcggcgaag gacctgccgg ccctgactcc
     4501 cgacgccctc gtgttggccg ccgtacctga acgggctgat ccacgcgacg ccctcgtcgg
     4561 ttgccggttt gacgacctgg cggcgggggc cgtggtggcc accggatcga tccgtcgccg
     4621 agcccagttg gcccattggc gtcctgacct ggagttcgcc agcttgaggg gaaacatcgg
     4681 tacccggttg gcgaaactgg acggtgctga cggtttcgca gcgatcgtgg tggcggttgc
     4741 cgcgctcgat cgactgggcc tgaccccggc ggtggtcgat ccattggacc agtcggtact
     4801 gcttccccag gtaggtcagg gggcactggc cgtggagtgc cgaagcgatg acggttcgtt
     4861 cctcgaactg ctcgccgctg tggacgatcc g
//
LOCUS       DASCMR010000052         3406 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000248141, whole genome shotgun sequence.
ACCESSION   DASCMR010000052 DASCMR010000000
VERSION     DASCMR010000052.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3406)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3406)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3406
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000248141"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..873
                     /locus_tag="QGG16_01230"
     CDS             <1..873
                     /locus_tag="QGG16_01230"
                     /inference="COORDINATES: protein motif:HMM:NF015535.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P1 family peptidase"
                     /protein_id="HJP23931.1"
                     /translation="NYSDCVARTGCTVLLFPEGTVASGEVRGGAPATREFDLLAPERS
                     VERLDALVLSGGSAFGLAAADGVVSHLAGAGIGYATEGGPVPIVVGLALYDLLEGDGS
                     VRPTAADGRVAAETAMATAEMAVATGPVGAGTGATVGKWRGRTHARPGGVGVAVVAHG
                     GVTVAAVVAVNAAGDVGHPATSAAVADGVFGGWPVAGDAGDASDLPGRRGNTTIGAVV
                     TDAALTKGECLLMAQSAHDGLARAVFPPHMRSDGDAFVAAATGRAEAAEAADIDVLRV
                     LAVAAVERAVVRAC"
     gene            915..1490
                     /locus_tag="QGG16_01235"
     CDS             915..1490
                     /locus_tag="QGG16_01235"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: protein motif:HMM:TIGR00758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004844 - uracil DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HJP23932.1"
                     /translation="MTTTPESLALLADEAASCTACGLAKGRTQVVFGTGAPNADVMFV
                     GEAPGAREDEQGVPFVGRSGQLLDRLLAEELSVKRSDVYIANVVKCRPPDNRDPRPDE
                     IAACRPWLAQQLELVDPAVIVTLGNFASRLLLATATGITKLRGADYRYGNPPRHLVPT
                     FHPAAALRGGAGVLADMRSDFGRARNLMMAS"
     gene            1504..2022
                     /gene="tsaE"
                     /locus_tag="QGG16_01240"
     CDS             1504..2022
                     /gene="tsaE"
                     /locus_tag="QGG16_01240"
                     /inference="COORDINATES: protein motif:HMM:TIGR00150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HJP23933.1"
                     /translation="MTTDLPLLTVSTTSAEGTQAVAAALAGLSRAGDLLVLCGDLGAG
                     KTAFTQGFGRALGVTTPITSPTFTLANRYTGDELTVHHLDVYRLTHIDEVRDLGLYEL
                     VDDRSVTLIEWGDVISGALPGGYLEVRLTLGDGSDDRVLELRTVGADWSDREVALLTL
                     ETPVGGDGGITC"
     gene            2016..2717
                     /gene="tsaB"
                     /locus_tag="QGG16_01245"
     CDS             2016..2717
                     /gene="tsaB"
                     /locus_tag="QGG16_01245"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HJP23934.1"
                     /translation="MLILGIESAGAQVGCAVGGHEGVLASAQAGRGRRHAEALAPQID
                     FVRRQAGIELSEVGAVAVDVGPGLFTGLRVGIATAVALAQGLGVPMIPVPSLDLMAFP
                     ARWTTRLIVPALDARRGELFTALFRKVPGGIQRVRDANVCTPAELSAELEALDEPTLL
                     LGDGALRHAEEFAGLRGIEMAEQGLANPSARSLVQLAHARAMREEFVQPWELEPVYLR
                     QPDAQINWATRAGGA"
     gene            2753..3232
                     /gene="rimI"
                     /locus_tag="QGG16_01250"
     CDS             2753..3232
                     /gene="rimI"
                     /locus_tag="QGG16_01250"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: protein motif:HMM:TIGR01575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HJP23935.1"
                     /translation="MGECDVDAVRALDALVQPTPWSETFLRDQLTDTETRTLLVAEGA
                     DGTPVGHAVLVVVADEGHVTSIAVDPAHQRRGIGACLMAALCRDARTRGLTSMTLEVR
                     TSNTAAISLYRRFGFVPAGVRPAYYTDADGATTDALVMWIHDVDDPAFDEQFEKDQS"
BASE COUNT          467 a         1133 c         1213 g          593 t
ORIGIN      
        1 aactactccg attgtgtggc acgcaccggc tgtacggtcc tgctgttccc cgaagggacg
       61 gtggcctccg gcgaggtccg cggcggtgcc cccgcgacac gtgagttcga cctgctggct
      121 cctgagcgct cggtggagcg cttagacgcc cttgtgctgt ctggtggttc ggccttcggc
      181 ctggcggccg ctgatggggt ggtttcgcat cttgctggtg ccggaatcgg ttacgccacc
      241 gaaggcggtc cggtgcccat agtggtcggc ctggcgctct acgaccttct ggagggggac
      301 ggttcggtcc gtcccacggc cgctgatggt cgagtcgctg ctgaaacggc catggcaacc
      361 gccgagatgg cggtggccac cgggccggtc ggggccggca ccggcgccac ggtcggtaag
      421 tggcggggcc ggacccatgc ccgtcctggt ggagtggggg tagccgtagt cgcccacggc
      481 ggggtcacgg tggccgccgt ggtggccgtc aacgcggcgg gcgacgtcgg tcatccggcc
      541 acgtcggccg cggtggccga cggggtgttc ggcggttggc cggttgctgg agatgccgga
      601 gacgcctcgg atctgccggg tcggcggggc aacaccacca tcggggcggt agtcaccgac
      661 gccgccctta ctaaggggga gtgcctgctc atggcccagt cggcccatga cggtctggcc
      721 cgggccgtat tcccgcccca catgagatct gatggagatg ccttcgtcgc cgcggctacc
      781 ggccgcgccg aggcggcaga ggctgccgac atcgacgtgc tgagggtgct ggccgtggct
      841 gccgtcgagc gggccgtggt acgggcctgc tgacgggccc cgttctgagg ggatcgggtc
      901 gataatctgc ccgggtgacg accacccccg agtcattggc tcttctggcc gacgaggctg
      961 cttcctgcac ggcctgtggg ttggccaagg gtcgtacgca ggtcgtcttc ggtaccggtg
     1021 cccccaacgc cgacgtgatg ttcgtcggtg aagcacccgg cgcccgcgag gacgagcagg
     1081 gcgtgccctt cgtgggtcgc tccggccagc tcctggatcg gctactggcc gaggaactga
     1141 gcgtcaaacg gtccgatgtc tacatcgcca acgtcgtgaa gtgccgcccg cccgacaacc
     1201 gtgaccctcg ccccgacgag atcgccgcct gtcggccttg gctggcccaa cagctggaac
     1261 ttgtggatcc ggcggtcatt gtcacgctgg gcaacttcgc ctccaggctc cttctagcca
     1321 ccgccaccgg catcacgaag ctacggggcg ccgactaccg ctacgggaat ccgccccgtc
     1381 acctcgtgcc aaccttccac ccggcggccg ctctccgtgg tggggccggc gtgctggccg
     1441 acatgcggtc cgacttcgga cgggcccgca acctgatgat ggcctcatga acgggcgtcc
     1501 gagatgacga cggacctgcc cctcctgacg gtgtccacca cctcggccga aggcactcag
     1561 gccgtggccg ccgcactagc tgggctgtcg cgtgctggag acctgctggt gctgtgtggt
     1621 gacctggggg ccggcaagac ggcgttcacc caggggttcg gtcgggccct cggggtgacc
     1681 acacccatca cctcgcccac tttcaccctg gccaaccgct acacgggcga cgagttgacc
     1741 gttcaccacc tcgacgtgta ccgactcacc cacatcgacg aggttcgtga cctcggtctc
     1801 tacgagctgg tcgatgatcg gtcagtcact ctcatcgagt ggggggacgt catctccggt
     1861 gccttgcccg gcggctacct cgaggtccgt ctcaccctcg gcgacggctc cgacgaccgg
     1921 gtgctggagc tccggaccgt gggggccgac tggtccgacc gcgaggtggc cctattgacc
     1981 ctcgagacgc ccgtcggtgg agacggggga atcacatgtt gattctgggc atcgaaagtg
     2041 cgggtgctca ggtgggctgt gcggtgggcg gccacgaggg tgtgctggct tcggcccagg
     2101 ccggccgggg gcgccgtcac gctgaggcgt tggcccctca gatcgacttc gtccgccgcc
     2161 aggccggcat cgaactgtcg gaggtgggcg cggtggccgt cgacgtcggt cccggcctgt
     2221 tcactggcct gcgggtcggg atcgccaccg cggtcgctct cgcccagggt ctcggcgtgc
     2281 ccatgatccc ggtgcccagc ctcgacctga tggccttccc agcccgctgg acgacccgcc
     2341 tgatcgtccc ggcgctcgac gcccgtcggg gtgagctgtt cacggcgttg ttccgcaagg
     2401 taccgggcgg tatccagcgg gtccgcgacg ccaacgtctg cacgcccgcc gagttgtcgg
     2461 ccgagttgga ggccctcgac gagccgaccc tgttgctggg cgacggggca ctacgccacg
     2521 ccgaagagtt cgctggcctg aggggcatcg agatggccga gcagggcctg gccaacccga
     2581 gtgctcggtc gctcgtgcag ttggcccacg cccgcgccat gcgcgaggag ttcgttcagc
     2641 cgtgggaact cgagccggtg tatctacgtc agcccgacgc ccagatcaac tgggcgaccc
     2701 gggccggtgg ggcgtgatgc cggtggccgc cacgcaggtc gtgttgcgac ccatgggcga
     2761 gtgtgatgtg gacgccgtca gggcattgga cgccctcgtc cagcccacgc cgtggtccga
     2821 gaccttcctg cgtgaccaac tgaccgatac cgagacccgg accctcctgg tggccgaggg
     2881 ggctgacggc accccggtgg gccacgcggt gctcgtggtg gtggccgacg aggggcacgt
     2941 cacgtccatt gccgtggatc ccgcccacca gcgtcgtggg atcggagcct gcctgatggc
     3001 tgccctgtgc cgcgacgccc ggactcgagg cctgacgtcc atgacgctgg aggtccggac
     3061 gtccaatacg gcggccatct cgctctaccg ccggttcggg ttcgtcccgg ctggagtgcg
     3121 acccgcctac tacaccgatg ccgatggtgc gacgaccgat gccctggtga tgtggatcca
     3181 tgatgtcgac gatccggcgt tcgatgaaca gtttgagaag gaccagagtt gatgggtgac
     3241 acggctttgg gcgacacggt cacgccaaac acgattctgg gaatcgagac atcatgcgac
     3301 gagacagcgg ttgccgtcgt tgagcgggcc accgtggtcc ggtagtcagt ggtgtccagc
     3361 caggtcgagc agcacgcggt gttcggtggg gtggtcccgg agatcg
//
LOCUS       DASCMR010000053         3104 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000251735, whole genome shotgun sequence.
ACCESSION   DASCMR010000053 DASCMR010000000
VERSION     DASCMR010000053.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3104)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3104)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3104
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000251735"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            39..650
                     /locus_tag="QGG16_01255"
     CDS             39..650
                     /locus_tag="QGG16_01255"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013250.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HJP23936.1"
                     /translation="MGPKTSATTPTSLTGWAGVWTIPNLITVVRLGCIPWFLWLLVSQ
                     ENRMAAALLLGVLGATDWVDGWIARRFNQISDVGKLLDPTADRILLVVALVAIADDGS
                     IPMWFAVTILVREILIGLVALILLAIGVRRIDVTWWGKTGTFALLWAVPCFLAGQSTI
                     PAAVAFEAGAWIFGIPGLLISWIAAWGYVPVARSALRERRTRS"
     gene            697..1071
                     /gene="gcvH"
                     /locus_tag="QGG16_01260"
     CDS             697..1071
                     /gene="gcvH"
                     /locus_tag="QGG16_01260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0019464 - glycine decarboxylation via
                     glycine cleavage system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HJP23937.1"
                     /translation="MNVPSDLRYSVDHEWVRVMGDSRVRIGITDYAQDALGDVVFVET
                     PEVGTRIESGSVFGEVESTKSVSERFAPVTGEVVAVNEELETAPEKVNEDPYGEGWIC
                     EILAESEGDLMDSAAYQALIED"
     gene            1074..1472
                     /locus_tag="QGG16_01265"
     CDS             1074..1472
                     /locus_tag="QGG16_01265"
                     /inference="COORDINATES: protein motif:HMM:NF028007.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FHA domain-containing protein"
                     /protein_id="HJP23938.1"
                     /translation="MVGYPEGTNDEPTDAFDPVADVPHRSDRDQFPSECGLFVVESGP
                     KAGSRYGLEAPLTSVGRHGQADILLDDVTVSRRHVEVERIADRYLVRDVGSLNGTWLN
                     GGRIDTAELSDGDELQIGRFKLVFFHGTAD"
     gene            1534..2256
                     /locus_tag="QGG16_01270"
     CDS             1534..2256
                     /locus_tag="QGG16_01270"
                     /inference="COORDINATES: protein motif:HMM:NF024803.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HJP23939.1"
                     /translation="MNIGDVVTVLEAEFPDVTVSKLRFLEAEGLVRPARSASGYRRYE
                     EEDVARVIRALRLQRDRHLPLKVIASMLDESPPAGTPGDGGVDVPAFRERVGRRGRSA
                     EGGGLSGSVSVSLAELAVMVGLDEDTVAELERLGLVRGREAGSSTVYDDEAVLVGRVA
                     ACFVGHGFDVRHLRMYLVAAQREAGLLEQLVGPVAGGGGPGDSSHGRSLLEARQLVDE
                     LTDAGSALHELLVRRELGTVGR"
     gene            2253..2831
                     /locus_tag="QGG16_01275"
     CDS             2253..2831
                     /locus_tag="QGG16_01275"
                     /inference="COORDINATES: protein motif:HMM:NF012383.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HJP23940.1"
                     /translation="MNGPKLHRTAEEIERRIDSMAEELVDWVDVDTVVVGVLKGCLPF
                     MADLVRQFTVPVEIDFLALSTFLPDSGRVRLTRDLSIDVTGRKVLLVEGVVDTGFRLD
                     YLRRHLASHGASEVRVCTLFDRADRRVLPADLNHVGFDTGATFLVGFGLDHRGEFRNL
                     PAVVEVDLTELDRGGPEMVDAVRNTGRADTHN"
     gene            2894..>3104
                     /locus_tag="QGG16_01280"
     CDS             2894..>3104
                     /locus_tag="QGG16_01280"
                     /inference="COORDINATES: protein motif:HMM:NF014618.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nuclease domain-containing protein"
                     /protein_id="HJP23941.1"
                     /translation="MIAMEVLGVQEVLPSDTPVVLLRETEGERMLPIFIGLPEAKSIG
                     LAMTGQDPPRPMTHDLMASLLETFSV"
BASE COUNT          490 a          886 c         1086 g          642 t
ORIGIN      
        1 cgcttctggg ggtggttgcg gatcgtaggc tgcgcccgat gggaccgaag acctcagcga
       61 ccacgccgac gtcactcacc ggctgggcgg gagtttggac gattcccaac ctaatcaccg
      121 tggtccgcct cgggtgcatc ccgtggttct tgtggctact ggtctcccag gagaaccgca
      181 tggccgccgc tttgctgctc ggggtgttgg gtgccaccga ctgggtggac ggctggatcg
      241 cccgtcgttt caatcagata tccgatgtcg gcaagttgct ggatccgacg gctgaccgga
      301 tcctgctggt tgtcgctctg gtggccatcg ctgacgatgg gtctattcca atgtggtttg
      361 cggtgaccat cttggttcgg gaaatcctga tcgggctggt ggccctgatc ctgttggcga
      421 tcggggttcg gcgcatcgac gtgacgtggt ggggcaagac aggcacattc gccctcttgt
      481 gggccgtgcc atgctttctg gccggccagt ccacgatccc cgcggcggtg gccttcgagg
      541 ccggggcctg gatcttcggc attccgggcc tgctcatttc ctggatcgct gcctggggct
      601 acgttccggt ggcccgctcc gcactcaggg agcgccggac tcgttcttga gtaggcccgt
      661 tcctgaggag cgggccggta gcggtaagtt cattacatga acgttccctc cgatctccgc
      721 tattcggtcg accatgagtg ggtccgggtg atgggggaca gccgtgtgcg gattgggatc
      781 actgactacg cccaggatgc gctgggagac gtggtgttcg tcgagacacc cgaggtcggg
      841 acccggattg aatccggcag tgtgttcggt gaggtggagt caactaagtc ggtctcggag
      901 cgtttcgcgc cggtgaccgg cgaggtggtc gcggtcaacg aggagttgga gacagctccc
      961 gagaaggtca acgaggaccc ttacggcgag ggatggatct gtgagatcct ggccgaatcg
     1021 gaaggcgacc tcatggattc agcggcctat caggcgttga tcgaggactg atcatggttg
     1081 ggtatcccga gggcacgaat gacgaaccga cagacgcctt cgatccggtc gctgatgttc
     1141 cgcaccggtc cgaccgggat cagttcccct ctgagtgcgg gctattcgtc gtcgagtcag
     1201 gccccaaggc cggttcgcgc tacggcctag aagctccact gacctctgtg ggtcgccacg
     1261 gccaagccga catcctgctc gacgacgtca cggtgtcacg ccgtcacgtc gaggtggaac
     1321 ggattgccga ccgctatctg gtccgggatg tcggctccct gaacggcacc tggttgaacg
     1381 gcggacggat cgacacggcg gagttgagcg acggcgacga actccagatc ggccgattca
     1441 agttggtctt cttccacgga acagcggatt gagcccgcgg cgaggtcgga tggcgcatcc
     1501 ggtccatcac gacctactcg gaggatggaa ccaatgaaca tcggtgacgt ggtcaccgtt
     1561 ctggaggccg agttccccga cgtgaccgtt tccaagttgc ggttcttgga ggctgaaggt
     1621 ctggttcgcc cggcccgatc ggctagcggc tatcggcgtt acgaggagga ggacgtggcc
     1681 cgtgtcattc gagccctccg gcttcagcgt gaccggcatc tgccgttgaa agtgatcgcc
     1741 agcatgctcg atgagagccc tccggccgga accccgggtg acggtggcgt tgatgtaccg
     1801 gccttccggg agcgggtcgg tcgccggggg cgttctgccg aaggtggcgg actatctgga
     1861 tcggtgagcg tttccctggc cgagctggct gtcatggtgg gccttgacga ggacacggtc
     1921 gctgagctcg aacgtctggg tctggtccgg ggtcgcgaag ccgggtccag cacggtgtac
     1981 gacgacgagg cggtgttggt cggccgggtt gcagcatgct tcgtgggtca tggctttgac
     2041 gtgcgtcatc tccggatgta cctggtggcc gcccagcgtg aggccggcct cctggaacag
     2101 ctggtaggtc cagtcgccgg cggtggggga ccgggggact cttcccacgg tcggtcgttg
     2161 cttgaggctc gacagttggt cgacgagttg accgatgccg gctcggcgct acacgagttg
     2221 ctggtccggc gggaactcgg cacggtgggc cgatgaacgg accgaagctc catcgcaccg
     2281 ccgaggagat cgagcgacgg attgactcca tggccgagga gttggtggat tgggtagatg
     2341 tcgacacggt ggtagtggga gttctcaagg gctgcctccc gttcatggct gacctcgtgc
     2401 ggcaattcac ggtgcccgtc gagatcgact tcttggccct gagcacgttc ctgccagaca
     2461 gtggtcgtgt tcgccttacg agggacctgt cgatcgacgt gaccggacgc aaggtcctgc
     2521 tcgtagaggg tgtggtcgac acgggattcc gtctcgacta tctgcggcgg catttggcct
     2581 cccatggagc gtccgaggtg agggtctgca cccttttcga tcgtgctgat cggcgggttc
     2641 tacctgcgga tctgaaccat gtcggattcg acacgggggc gacgttcctg gtcggattcg
     2701 gactggacca ccggggagag ttccgcaacc tcccggcggt ggttgaagtc gacctgaccg
     2761 agctggatcg gggtggcccg gagatggtgg atgccgtgag gaacacggga cgggccgaca
     2821 cgcacaacta gggtttcggg gtgctgtttc actcgcccgt cgccctgaca gttccggccg
     2881 atgagagcga ccaatgatcg ccatggaggt gttgggcgtc caggaggtcc tgccatcgga
     2941 cactccggtg gtcctgcttc gggagactga gggcgagagg atgctgccca tcttcatcgg
     3001 gctacccgag gcaaaatcca tcggtctggc tatgaccggc caggatccgc cacgtcccat
     3061 gactcacgac ctaatggcct ccctgctgga gacattctcg gtgt
//
LOCUS       DASCMR010000054         2310 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000270399, whole genome shotgun sequence.
ACCESSION   DASCMR010000054 DASCMR010000000
VERSION     DASCMR010000054.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2310)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2310)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2310
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000270399"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..715
                     /locus_tag="QGG16_01285"
     CDS             <1..715
                     /locus_tag="QGG16_01285"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: protein motif:HMM:NF024703.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HJP23942.1"
                     /translation="TSATVPANLPIRLGLDRHDHRYEDVGSPFDFANQSMLYCATSMP
                     EPRDEGYLTACYDEIELLVNATGGRTLALFTSRRALDAAVEELRERLQWRILHQDDMP
                     RPLLMAEFADDESSCLFGTKGLWHGIDVPGPSLSLVVIDRIPFPRPDDPLLSARRDLV
                     GEREAFRQIDLPLAATDLAQGAGRLIRSITDRGMVAVLDRRLAANRSYRWDLLEALPD
                     MPRTGDRDEALDFLARLVD"
     gene            complement(734..1603)
                     /gene="era"
                     /locus_tag="QGG16_01290"
     CDS             complement(734..1603)
                     /gene="era"
                     /locus_tag="QGG16_01290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HJP23943.1"
                     /translation="MTSMMHSGDGHRSGFVTLVGRPNVGKSTLLNRILGQKVTIVSDK
                     PQTTRTEVRGVLTRPGVQAVFCDTPGIHKPHTLLGERLNHTARSALADMDVVLFLVEA
                     DGPIGRGDAFIAGGLPKDRTVLVVNKVDRVGRDRIAEQLIVASGFEFDQYFPISARDG
                     EGVDDLRDHVLGRLPEGPQYYPQDMVTDVPEAFWVAELVREQLLAIVKEELPHSIATR
                     VTEWEWPRVRCEILVERDSQKGIVIGKKGAVLKAVGTAARAQMLEGAFLELVVRVDKG
                     WQKRPKALDRLGY"
     gene            complement(1600..>2310)
                     /locus_tag="QGG16_01295"
     CDS             complement(1600..>2310)
                     /locus_tag="QGG16_01295"
                     /inference="COORDINATES: protein motif:HMM:NF015436.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HJP23944.1"
                     /translation="EHELIESVIAFGDRLVREVMVPRPDMGCIGSDLTVAGAMAEVAR
                     NGHSRTPVSGTGIDDIVGVVHAKDLMRAHLDGRDEEPIGSLARSPRFVPETKQADDLL
                     REMQAGRFHLAIVVDEYGGTAGLVTMEDLLEEEVGEIVDEFDEEEPLSQPVAGGGIRV
                     HGRMPIDELDELLGGSLPVGDWDTVGGLIFDALGHVPVVGEAVVVAGRRFGVEQVVGR
                     RITRVRIGAPEVETGTPT"
BASE COUNT          398 a          843 c          677 g          392 t
ORIGIN      
        1 caccagtgct accgtcccgg ccaaccttcc gatccggctt ggactggaca ggcacgacca
       61 ccgctacgag gacgtgggta gtccgttcga cttcgccaac cagtcgatgc tctactgcgc
      121 gacctccatg cctgaacccc gggacgaggg ctatctgacg gcctgctacg acgagattga
      181 actcctggtc aacgcaaccg gcggacggac cctcgccctc ttcaccagcc gccgggcact
      241 ggacgccgcc gtcgaggagt tgcgggagcg gctgcaatgg cggatcctgc atcaggacga
      301 catgccgcgc ccgcttctga tggctgagtt tgccgacgac gagtcctcct gcctgttcgg
      361 caccaagggc ctttggcacg gcatcgacgt gccgggcccg agcctctcgc tggtcgtgat
      421 cgatcggatc ccgttcccgc gccccgacga ccctctcctc agcgcccgac gcgacctcgt
      481 gggcgaacgt gaagccttcc gccagatcga ccttcccctg gccgccaccg accttgctca
      541 gggggcgggc cggctgatcc gaagcatcac cgaccggggc atggtggcgg tcctggatcg
      601 acgactggcc gccaacaggt cctatcggtg ggacctgctc gaggctctac cggacatgcc
      661 ccgaaccggc gaccgggacg aggcgttgga ctttctggct cgactggtgg actgacccac
      721 agttcgatcg gtctcagtag cccagccggt caagggcctt ggggcgcttc tgccagccct
      781 tgtcgacacg gaccaccaac tcgaggaaag caccctcgag catctgggcc cgggctgccg
      841 tgccaacagc ctttaggacg gccccctttt ttccgatcac gatccccttc tgggaatcac
      901 gttccacaag gatctcgcaa cgaacccgtg gccattccca ctcggtgacc cgggtggcga
      961 tggagtgcgg cagttcctcc ttcacgatgg ccagcaactg ctcacggacc agttcagcca
     1021 cccagaacgc ctcgggtaca tcggtgacca tgtcctgtgg gtagtactgc ggcccctcgg
     1081 gaagacgccc caggacgtgg tcccggagat cgtccacgcc ctcaccatcc cgggccgaga
     1141 tcgggaagta ctggtcaaac tcgaagcccg aggcgacgat tagctgttcg gcgatccgat
     1201 cccgacccac ccggtcgacc ttgttcacca ccaatacggt ccggtccttg ggcagaccgc
     1261 cggcgatgaa ggcgtcgccc ctcccgatcg gtccgtcggc ctccaccagg aacaacacga
     1321 cgtccatgtc ggccaacgcc gaacgagcgg tgtggttgag acgctcgccc aacagcgtgt
     1381 ggggcttgtg gatccccggc gtgtcacaga acacggcctg cacgcccggg cgggtcaaca
     1441 ccccacggac ctcggttcgc gtggtctgtg gcttgtcgga aacaatggtg accttctggc
     1501 ccaggatccg gttcaacagc gtcgacttcc cgacattggg tcgcccgacc agggtcacga
     1561 agcctgaccg gtgtccatca cccgaatgca tcatggacgt catgtcggcg tcccggtctc
     1621 gacctccggt gccccgatgc gaacccgggt gatccgacgc cccacgacct gctccacccc
     1681 gaaccggcgc ccggccacca ccacggcctc gcccaccacg ggcacatggc ccaacgcatc
     1741 gaagatcaga ccacccacgg tgtcccagtc cccaacaggc aggctgcctc ccaggagttc
     1801 gtccaactcg tcgatcggca tgcggccgtg gacccggatc ccgccaccag ctaccggctg
     1861 ggacaggggt tcctcctcgt cgaactcatc gacgatctcg ccgacctcct cctcgagtag
     1921 gtcctccatg gtcaccagac cggcggttcc cccgtactcg tcgaccacga tcgccaggtg
     1981 gaagcggccc gcctgcattt cgcgcaatag gtcatcggcc tgcttggtct caggcacgaa
     2041 tctcggtgac cgggccagag aaccgatcgg ttcctcgtcg cggccgtcca gatgggcccg
     2101 catcaggtcc ttggcgtgga ccacgcccac gatgtcgtca attcccgtgc cgctcaccgg
     2161 ggtccggctg tggccgttgc gggcaacctc ggccatggcc ccagccaccg tcaggtcgga
     2221 cccaatgcac cccatatcgg gtcggggcac catcacctca cggaccaggc ggtctccgaa
     2281 ggcaatcacc gactcgatca attcgtgttc
//
LOCUS       DASCMR010000055        17003 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000272071, whole genome shotgun sequence.
ACCESSION   DASCMR010000055 DASCMR010000000
VERSION     DASCMR010000055.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 17003)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17003)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17003
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000272071"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..837)
                     /locus_tag="QGG16_01300"
     CDS             complement(<1..837)
                     /locus_tag="QGG16_01300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exonuclease H3TH domain-containing
                     protein"
                     /protein_id="HJP23945.1"
                     /translation="MNDPGRIPVVHLVDGTYELFRYHFAVPSHITTEGVEVAATRGVL
                     GSMLGLLADGATHVGVATDRVVESFRNDLFDGYKTGEGTPPELFAQFPLLEAVLEAAG
                     FTVFAMVAHEADDAMGAAAVRAGADPRVSAVHICTPDKDLAQVVDDAAGIAQLDRRRE
                     VLYDQAGVVEKFGVEPTSIPDWLALVGDTADGIPGLPGWGAKSSSVVLARYGHLESIP
                     ADAEDWDVTVRSAAKLAATLVERRDDAELYRHLATLDLDAPVMDDVEDLRWTGPADHL
                     EAV"
     gene            complement(848..1261)
                     /gene="mce"
                     /locus_tag="QGG16_01305"
     CDS             complement(848..1261)
                     /gene="mce"
                     /locus_tag="QGG16_01305"
                     /EC_number="5.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA epimerase"
                     /protein_id="HJP23946.1"
                     /translation="MLLTQIDHVAIAVHDLEAAIDYHQRAFGAEVHHREVVEIDGVEE
                     ALLKIGESYLQLTTGTRPGSAITTFLAKRGEGIHHVGYRVDDCAEALAAIVAAGGRAI
                     DPEPRPGSRGTTVAFVHPKGSFGTLIELVQEGIQE"
     gene            complement(1700..2302)
                     /gene="recR"
                     /locus_tag="QGG16_01310"
     CDS             complement(1700..2302)
                     /gene="recR"
                     /locus_tag="QGG16_01310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016292938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombination mediator RecR"
                     /protein_id="HJP23947.1"
                     /translation="MYADAVQAVIDELGRLPGVGPKSAQRLAFHLMKLSVEDTTRLTV
                     AIDEMKDRVRFCDRCFNIAEAELCPVCADDRRDGSILCVVEEPRDIVAVERTGEFGGR
                     YHVLGGAISPIEGIGPDQLRIRELLARLDSEGVAEVILATNPNIEGEATAMYLARLVG
                     PLGLVVTKIASGLPVGGDLEYADELTLGRALEGRRRLDGV"
     gene            complement(2322..4166)
                     /gene="dnaX"
                     /locus_tag="QGG16_01315"
     CDS             complement(2322..4166)
                     /gene="dnaX"
                     /locus_tag="QGG16_01315"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR02397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HJP23948.1"
                     /translation="MAYTSLYRRYRPQRFAEMRGQEHVVAALRNAVAGERVLHAYLLS
                     GPRGTGKTTAARILAKALNCTQPEAGEPCCACASCEAVNAGTSFDLHELDAASNNKVD
                     DMRELLAKVALGTPGRTKVYLLDEVHMLTSGAENALLKTLEEPPDHVVFVLATTEPHK
                     VVETIRSRSQHLELNLLPAEQLEALARDVVADAGLDVDEAGISHAVRSGRGSARDTLS
                     ALDRVVAGGVTDDDSTTDALLAALAAGDAGAALGALAAGIARGREPRVTGEALLAALR
                     EAFLVSMGVPATQLAEADRVRAEAFAEQVTPVVITRSLEALGSALVAMRRSPDPRVDL
                     EVALVRLTAGAATGAGAVPTTAQGADDASATIAALTRRIERLESTLESALKSTGGLPP
                     ETSAPTSGSASPPPPAPPGRPAPPEPPATPSLPPLPASRSVSGPAAEGRARLAEARPS
                     ASPPPPPTDEPAPVAAPAVASVGGGSVPPLEELAGAWAGDLLEQMSRKGRARFSAGRF
                     IAVEDGTAVMGLPNEPHRKRCEDLRGELEAVLADRFQTTLSVRLVVDDGSSDGMPTGG
                     KTATPEARTPQADDEVDLSALVDADAAEGSAVERLTEAFPGAALVEPD"
     gene            complement(4252..4338)
                     /locus_tag="QGG16_01320"
     tRNA            complement(4252..4338)
                     /locus_tag="QGG16_01320"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4302..4304),aa:Ser,seq:gga)
     gene            4408..4506
                     /gene="ffs"
                     /locus_tag="QGG16_01325"
     ncRNA           4408..4506
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="QGG16_01325"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            4595..5068
                     /locus_tag="QGG16_01330"
     CDS             4595..5068
                     /locus_tag="QGG16_01330"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0052717 - tRNA-specific adenosine-34
                     deaminase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HJP23949.1"
                     /translation="MTSTKFESADQLHEWMGLALAEAEAAGTEGEVPIGAVVVIDGEV
                     VSRRHNKREATGDPTAHAEVLALRDAAAHAGTWRLSEATLVVTMEPCPMCAGAAWAAR
                     VGHVVWGAANDDAGAMGSLYNLAADPRLNHEHLVTAGVRADECSALLVDFFTERR"
     gene            5114..5203
                     /locus_tag="QGG16_01335"
     tRNA            5114..5203
                     /locus_tag="QGG16_01335"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:5148..5150,aa:Ser,seq:cga)
     gene            complement(5295..6737)
                     /locus_tag="QGG16_01340"
     CDS             complement(5295..6737)
                     /locus_tag="QGG16_01340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23950.1"
                     /translation="MAKGNPHRWTLAVLVALALMAGACGGGGTDGAEPAPTTAGATTT
                     IASTTTAVPATTDPPDEPLDATTTTEAPAGTTTTTTEAPIVLTDSFRGVTAETIKVGF
                     ASIDFEKFTETYGIPLPYANYDDMVDAYVAHINSTGGIHGRMIELVHSHFLPVGPVSA
                     ETTCVELAEDHRVFVVLNGFAGPGAESTNLCFPGTYDTILIGGKPTPEQLAESTAPWI
                     SYDMSLGRRGRAFVNLLRETGRLDGLGPIMIFGANAEYEAIMADTKAALIEVDMQVPI
                     SVANTNTGDETATIAFLEVLLERARSEAVSTIMFVGEANYAMEYLFRLGDEFTVLILN
                     GDSTNSWMDSPPEGIESAGQLLTNRAFESSEDPDTAECMSIIEPALGLEVLSPNLLEP
                     GQTNYWAGSMNVCKSFELFRYIATAAGPDLTNDSFREAAESLGTFSVTAQPYNSIGPG
                     KADARDTLSLAEWSHEEAIWIALSDPTNVR"
     gene            complement(7001..7567)
                     /locus_tag="QGG16_01345"
     CDS             complement(7001..7567)
                     /locus_tag="QGG16_01345"
                     /inference="COORDINATES: protein motif:HMM:NF024701.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR-like C-terminal domain-containing protein"
                     /protein_id="HJP23951.1"
                     /translation="MAARRGVTSEQVAEAALAMLDEAGRLEAVRPSAVADRLGIRSQS
                     LYAHVDGTAGLRRLLALLCLDELAGLVTTAAVGRSGRDAVEAIVRTQLDHALAHPGRS
                     EATVHPPGNDPELVASIERAGGPLQTVLTSLGLDTENRVHWVRLQLAITTGYAALVRD
                     GRLTLSPEPSTTVDHLVGVLLDRLESVA"
     gene            7626..8708
                     /locus_tag="QGG16_01350"
     CDS             7626..8708
                     /locus_tag="QGG16_01350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23952.1"
                     /translation="MNVDSLNDPTSVLLQVDDGADLVNALAEHGWGDGLPVIAPTPER
                     VDAMLAGNPGDAVIAVLPPRFGEATRRTLAINAVMAGCLPAHLPVLEAAVRALSQPEL
                     NLRGVNATTHCVAPLLIVHGEIARTAGYHGGLGAFGPGNRANAATGRAMRLVLLHVAG
                     ATPGDGDASTQGSPAKYGYCVAENVDASPWPAYPTTIGVDTASAVTVHCGEAPHNVHD
                     MESDDPARILDKVASAMATTAQNNACISQGEYLVALCPEHAATCADAGWSRRDVVSYL
                     FQKARLPAAELKRAFTLRAWEPWMERLGDHDPAPMTAHPDNIRILVVGGPGKHSSVIP
                     SWGMTQSVTLPILSKTTCPEAGLDSC"
     gene            8702..8977
                     /locus_tag="QGG16_01355"
     CDS             8702..8977
                     /locus_tag="QGG16_01355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23953.1"
                     /translation="MLIHRPDGDVATPPAQRAPSPTVLAGCRIGILDNRKPNADVLLE
                     QLAMRLAERTGATVVHTATKNAAIPCGDQVLDLLAEEVDVILTGTAD"
     gene            9011..9235
                     /locus_tag="QGG16_01360"
     CDS             9011..9235
                     /locus_tag="QGG16_01360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23954.1"
                     /translation="MKLEAAGRPTVLVATGALRELADQTAYDLGLADLRVVSVAHPIG
                     GVDPDEIRRRADGVVDEVLTLLTVTTGGNP"
     gene            9232..10083
                     /locus_tag="QGG16_01365"
     CDS             9232..10083
                     /locus_tag="QGG16_01365"
                     /inference="COORDINATES: protein motif:HMM:NF024950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJP23955.1"
                     /translation="MTITIDHGGRRALVTGAGAGIGREIARWLARAGADVAVNDLVPE
                     RAEAVVAEINTEAGTSDGSGRAVAVPADCRDDEAVESLVTATVDHLGGLDLAVNNVGM
                     LPPGRRPQPFVANRADDWRDIVDQNLVVAALCARAEAEAMLQASTNGSILFVTSGETT
                     RPAPYNAVYAAAKAAINHLVTTMAVELGPNGIRVNAMAPGTTLTEMVAPAFTKERVTA
                     LVASTPLRRMVEHDELARLAVFLTSDLARCITGQFVLADAGAFLSRSRPANDEGLVNP
                     LGGSNAS"
     gene            complement(10120..11019)
                     /locus_tag="QGG16_01370"
     CDS             complement(10120..11019)
                     /locus_tag="QGG16_01370"
                     /inference="COORDINATES: protein motif:HMM:NF012334.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HJP23956.1"
                     /translation="MSGLTPLEVADSVAVVTGGANGIGRGIVRGLLEAGATVVVADIE
                     QDVLDTTVAALSASHPGRITGVVTDVINDASTDALADHVYATHGRCNLLFNNAGVGSG
                     GGGRMWTHEPNDWRWCYSVNVFGVANGVMSFVGRMLESGEPGHVVNTSSGDGGFAPVP
                     NAAVYASSKAAVSCLTEALAHQLAEDSEVVGASVFYPSGGLMDTGLFTSYRNRPTELE
                     RVRGGTGRASMTFTQMKDLLEKAGREIKVADLDEMGRWVVECASQRQYVIARDLDTTI
                     DLLHRRADAIDRRDLPPHHQMGL"
     gene            complement(11016..12335)
                     /locus_tag="QGG16_01375"
     CDS             complement(11016..12335)
                     /locus_tag="QGG16_01375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJP23957.1"
                     /translation="MSEQSNQEPNRSDHHVVISADTHCGAALWDYKEYLEKRYHEDFD
                     DWARSIEEGERRTAEVFKDAERSPLNVGVDGDPAVDGNRNYDSDRRLREQEADGVVAA
                     VLFPNTQPPFAPAAASQFEAPAYSDNYGHRWAGLRAHNRWLLDFVSEAPERRAGIGQI
                     FLGDVEGSVAEIEWAAENGLRGGILLPGTPPDSPFEPLYSKAYRPIWAAAEACGMPLN
                     HHSGGATPNFGNHFPASLAMFMLEVTWWSQRALWHLMFSGVFERHPDLQWVNTESGTA
                     WVPDTLARLDDFYDRMKTSKYGSEAIFGGAAVAEMSLTPSEYWQRQCHVGASFLRPTE
                     AAVVRQIGVDKVMWGSDYPHIEGSHPNTDEHLRLTFGEMTADEATQILTTNVARLYRF
                     DVAALQALADQHCPTKAHVASGIAYGNIPETAKGCPGMAPQNQVQVA"
     gene            complement(12403..13683)
                     /locus_tag="QGG16_01380"
     CDS             complement(12403..13683)
                     /locus_tag="QGG16_01380"
                     /inference="COORDINATES: protein motif:HMM:NF016777.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJP23958.1"
                     /translation="MEREVSTGSEPYVVVSSDTHAGLQCEEYRPYLESSLHEEFDVYV
                     AERHRHRQIAEEVNAEFIAEWEGDNEWGLQGAYDPEVRDPVLDADGVAGEIIFADGDA
                     VTGQESPPFGAGLAAGQITDARQAFGGARAHNRWLEEFCATDPVRRAGVALVPVVHDV
                     DEAVREVEALAGKPGIRGVMVPTLWHGHPPYGSDHYDRFWAACADAGLVVHTHSGEAD
                     FDAYGDNVAMYISEVPFWTHRILWQLLFSGKFDKFPNLRYAVVECGSFWVGDLLWKAD
                     VNFGASFKIKKMGSRMKGLISRLPSEYFGENVFIGASTMSREEVRRRHVNGIDALMWG
                     TDYPHPEGSWPNTRARLRNDFQDATIEDTRRLLGLNAVDCYGLDEAGLQAVADRIGPT
                     PADLGQSPNVRTASDATRTARWWLDEYGCEMQYG"
     gene            13781..14512
                     /locus_tag="QGG16_01385"
     CDS             13781..14512
                     /locus_tag="QGG16_01385"
                     /inference="COORDINATES: protein motif:HMM:NF012655.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HJP23959.1"
                     /translation="MATRADDGDLMATQPPHQAVPQSSGSDVGPGRRAGLDAGEILDR
                     AIALVEDEGASALTMRRLAAELGVATTSIYWHVGNRDDLVTALVERHGERLAQQQIEG
                     ETARDRVQAVARMIWSSAVDHREVTRLAAAAGASSLHARQLELAMARELQDAGVVGPT
                     ARDAMRAITACVGGFIVATLIDDRTPSSLRRTSVLGGAESTGLELSTLEALAEPADLP
                     SLFEATLRAVVDSVVPADLSANAYL"
     gene            complement(14595..>17003)
                     /locus_tag="QGG16_01390"
     CDS             complement(14595..>17003)
                     /locus_tag="QGG16_01390"
                     /inference="COORDINATES: protein motif:HMM:NF012602.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin dinucleotide binding
                     domain-containing protein"
                     /protein_id="HJP23960.1"
                     /translation="IMYHVGRMGDDSYMERVLHSWGIDGHNSHTNICSSGARVGYASW
                     MGFDRPSADFANAEVIFLISSHLEAGHYFNPHAQRIIEGQKNGATVICVDPRLSNTAA
                     KADHWMSPWPGTEAVMLLAIARLLLVDDTWDADFFERWVNWETFLTEARPDLEPNFAN
                     VRQALIDQYAEYTPAEAARVCGLHEDQILEVAKVIGDGLGKFASHTWRASSAGNEGGW
                     MVARCLQFLNVLTGSVGTEGGTNANGWNKFIPVTPIHPKPQARWNEMQWPIEYPLSHH
                     ELSILLPHFLKAGRGRIDTYFTRVYNPLWTNPDGFTWMEVLRDPELVGCHVALTPTWN
                     ESAWFADYVLPMGIASERHDVSSFETHNGRWIGFRQPVNRRHRELEGETFERTHEANP
                     GEVWEEQEFWIDLSWRIDPDGALGIRQQFESQTDPGAPLSLDEYYSMLFEGSVPGLPE
                     AAAKEGLTPLEYMRRKGSFALPGDQTQVYEREVSEDDLNGAVRDAAGVWRRPGTAGSH
                     NSLDEITGHMPFIGDGSPAVDIDGEAKFGFPTPSKKLEFFSETIRDWGWPEYSMPAFI
                     RSQVHWEDLDMTAGERILVPTFRIPTLIHTRSANSQWLNEISHRHPLWLHPGDAEQLG
                     IDENGLVRITTRTGHFVIQSWRTEGIRPGVVAASHHMGRWRLEEDEARSWGAGKASIG
                     QDDDGRWRLRREHGAEAYESDDPDTGLIWWTDTGVHQNLTFPVQPDPISGMHCWLQRV
                     TVGPAEEGDAYGDVVVDTAASHRIFEEWLAKTRPGPGPGNLRRPLWMARPVKPQATAY
                     NYDA"
BASE COUNT         2940 a         5702 c         5413 g         2948 t
ORIGIN      
        1 caccgcctca aggtggtcgg ctgggccggt ccaccggagg tcctccacgt cgtccatgac
       61 cggggcatcg aggtccaggg tggccagatg ccggtagagc tcggcatcgt cgcgccgctc
      121 gaccaacgtg gcagccagct tggcggcgct ccgcaccgtg acatcccagt cctcggcgtc
      181 agccgggatc gattcgaggt ggccgtaccg ggccagcacg accgaagagg acttggcacc
      241 ccagccagga agaccgggga tgccgtcagc ggtatcgccg accagggcca gccagtcggg
      301 tatcgaggtc ggttcgacgc cgaacttttc gacgacgccc gcctggtcgt agaggacctc
      361 ccgtcgacgg tccagttggg caatgcccgc cgcatcgtca accacctggg cgaggtcctt
      421 gtccggcgtg cagatgtgca cggcactgac ccgagggtcg gcgccggccc gtaccgccgc
      481 ggcacccatc gcgtcgtcgg cctcgtgagc caccatggcg aagacagtga agcccgccgc
      541 ctccagcaca gcctccaata gcgggaactg agcaaacagc tcgggaggcg ttccctcgcc
      601 cgtcttgtag ccgtcgaaca ggtcgttgcg gaacgactcg accacccggt cggtcgccac
      661 tcccacgtga gtagcgccgt cagccagcag accaagcatc gatcccagca ccccccgggt
      721 ggccgctacc tcgacgccct cggtcgttat gtgggacggc acggcgaagt ggtaccggaa
      781 gagctcgtag gtgccgtcta cgagatggac gaccgggatg cggccgggat cgttcaccgt
      841 caccccccta ctcctgaatc ccttcctgga ccagttcgat cagggtgccg aacgatccct
      901 tgggatggac gaaggccact gtcgttcctc gggaccccgg tcggggttca ggatcgattg
      961 cgcggccgcc ggcggccacg atggcagcca acgcctcagc gcagtcgtcc acccggtagc
     1021 cgacatggtg gatgccctca ccccgcttgg ccaagaatgt ggtgatggcc gaaccgggtc
     1081 gggtcccagt ggttagttgg agataggact cgccgatctt gaggagcgct tcctcgacac
     1141 catcaatctc gaccacctcc cggtggtgga cctcggcgcc gaaggcccgc tggtggtagt
     1201 cgatggccgc ctcaaggtca tgaacggcaa tggccacatg gtcgatctgg gttagcagca
     1261 cgaggtgcct cctgtctggt tcggtttccg gttcgtcctc aggtgccgag ggtcgaaaca
     1321 gcaaccccga ccgtggtaat ccacagcgct gtactccgtc ctgtggacag gactgtggat
     1381 aacttccccc tcccagcggc cgggcctcgg accctccgat cggcctcaat ctggctgttt
     1441 tgtgacgatc tgcggggcat tttggcctga cttgtcacaa tcttgtcaat gttgtaacgt
     1501 aactgcaata gttgggaacc acccctccac ccaactcgga gacggcccct cggcgtggca
     1561 aaggcccccg ggggggcgtt tccgtgtcga aggtcgtatg ccggccccgt catccaccag
     1621 gtgtccacag ggcatccaat cggggatctg atacggcgtc gactggtcca gatagctggg
     1681 ttcacgacac aacaccggct caaaccccgt ccagccgacg acgaccctca agcgcccggc
     1741 ccaacgtgag ttcgtcggcg tactccagat cgccccccac tggcagccca ctggcgatct
     1801 tggtgaccac caagcccaat ggccccacga gacgggccag gtacatcgcg gtggcctccc
     1861 cttcgatgtt cgggttagtg gccaggatca cctcagctac gccctccgag tccagcctgg
     1921 ccagcagttc ccggatccga agctggtcgg ggccgatccc ctcgatgggg ctgatggctc
     1981 cgccgagtac gtggtaacga ccaccgaact cgcccgttcg ttccacggca acgatgtccc
     2041 gaggctcctc gaccacgcac aagatcgatc cgtcgcggcg atcgtccgcg cacaccgggc
     2101 agagttcagc ctcagcgatg ttgaagcacc gatcacaaaa tcgcacccga tccttcatct
     2161 cgtcgatggc caccgtgagt cgggtggtgt cctcgaccga gagcttcatc aggtggaagg
     2221 ccagacgttg agccgacttg ggtccgacgc cgggcagacg tcccaactcg tcgatcaccg
     2281 cctggacggc atctgcgtac acctcgacga ccccggtccg gtcagtccgg ctcgaccagg
     2341 gcagcccccg ggaacgcctc ggtgagtcgt tccacggccg aaccctcagc cgcgtccgca
     2401 tccacaaggg cggacaggtc gacctcatca tcagcctggg gggtccgggc ttcaggagtc
     2461 gccgtctttc caccggtcgg catcccatca gaagagccgt catcgaccac cagccggacg
     2521 gaaagcgtcg tctggaaccg gtccgccaaa acagcctcca actcgccacg gaggtcctcg
     2581 cagcgcttcc gatgtggctc gttgggtagc cccatcaccg cggtgccgtc ctcaaccgcg
     2641 atgaaccggc cagcggagaa gcgtgcccga cccttacggc tcatctgctc aaggaggtcg
     2701 ccagcccatg ccccagcaag ttcctcgagg ggtggaacag acccgccgcc cacggaggcc
     2761 acggcgggag ccgcgacagg ggcaggttca tcggtgggcg gaggaggggg cgacgcgctc
     2821 ggccgcgcct cagcgagccg agcccgtccc tcagcagccg gacccgacac cgatcgcgat
     2881 gccggcagag gcggtagaga cggagttgcc ggtggttctg gcggtgcagg tcgtcctggg
     2941 ggtgctgggg gtggaggcga cgcagaacct gacgtcggcg ctgaggtctc cggcggcaac
     3001 ccacctgtcg acttcagcgc cgactccagg gtcgactcga gccgttcaat ccgacgagtg
     3061 agagcggcga tggtcgcgga agcatcgtct gctccctggg ccgtggtggg aaccgcgccc
     3121 gcgccagtag ccgcgccggc agtcagacgg acaagggcca cctccaagtc aacccggggg
     3181 tccggcgaac ggcgcatggc cactagcgcc gagccgaggg cttcgagcga acgggtaatg
     3241 accaccgggg tgacctgctc ggcgaacgcc tcggcgcgaa cacggtcggc ctcggccaac
     3301 tgcgtggccg gcacccccat cgagaccagg aaggcctccc ggagggccgc cagcagcgcc
     3361 tcaccggtga cccggggctc tcgcccccgt gcaatacctg cggcgagtgc cccgagggcc
     3421 gcaccagcgt caccggcagc cagcgcagcc agcagggcat cggtggtgct gtcgtcgtcg
     3481 gtgaccccgc ccgccaccac gcggtccagt gccgacaagg tgtctcgcgc cgagcctcgc
     3541 ccggaacgca cggcatggga gatacccgct tcgtccacgt cgaggccggc gtcggccacc
     3601 acgtcacggg ccagtgcctc gagctgttcg gccgggagga ggttcaactc gaggtgctgg
     3661 gaacgactgc ggatggtctc gaccaccttg tggggttcgg tggtagccag tacgaacacc
     3721 acgtggtcgg gcggttcctc cagggtcttg aggagtgcgt tctcggcacc cgaggtgagc
     3781 atgtgtacct cgtccagcag gtacaccttg gtgcgtcccg gagttcccaa agccaccttg
     3841 gccagcagtt cgcgcatgtc atcgaccttg ttgttggacg cagcgtccaa ctcgtggagg
     3901 tcgaacgacg tcccggcgtt cacagcctca caagaggcac acgcacaaca cggctcacca
     3961 gcctcgggct gggtgcagtt cagtgccttg gccaggatcc gggcagctgt tgtcttccca
     4021 gtgcctcggg gcccgctcag cagataggca tgtagcaccc gctccccggc caccgcattt
     4081 cgcagggcgg ccaccacgtg ttcctggccc cgcatctcag cgaaccgctg cggtcgatac
     4141 cggcggtaga gggaggtgta ggccacgcgc cgaccctaca accgggcggt gacgggacac
     4201 tctggaaggc cgcgctagct ccacaccagg gtcagacagg agggaattcg gcggagggag
     4261 tgggattcga acccacggtg acggtgaagc cacacacgcg ttccaggcgt gccgaatcgt
     4321 ccgctctcgc atccctccgg gaaccggccg gggccgggat ccgggcgcta agggtatcgt
     4381 tgccggacac ccgttctgga gtgtggcggt cgggtcctgt gcgatcggag cctgtgaatc
     4441 gagtcagggc cggaaggcag cagctctcag cggaacctct gaggtgccgc aggtcacctg
     4501 gccgccacgc tcgagaacgg gtgttgccca tttccacaac ccggcattga ccaccggtcg
     4561 tctgccgcta atcgtcgacc cctatcgtca ccacatgacc tccaccaagt tcgaatccgc
     4621 tgaccagctg cacgagtgga tgggcctcgc cctggccgaa gccgaggcgg cagggaccga
     4681 gggcgaggtg ccgatcggtg ctgtggtggt gatcgacggc gaggtggtgt cccgacgaca
     4741 caacaaacgt gaggccacag gtgatccgac ggcccacgcc gaggtcctgg cgttgcggga
     4801 cgcagcggcc cacgccggga catggcgcct ttccgaagcc actctggtag tcacgatgga
     4861 accctgcccg atgtgtgccg gcgcggcgtg ggcggcccga gtcggccacg tggtctgggg
     4921 cgcagccaac gatgacgccg gtgctatggg cagcctctac aacctcgccg ccgacccccg
     4981 actgaaccac gagcatctgg tcaccgccgg ggtacgggcc gatgagtgtt cggccctgct
     5041 ggtggacttc ttcaccgaac gacgctgaac ccgccggttg gccggcctcc agcgcatcag
     5101 tagcctcgcc ggtggaaggt tgccagagcg gacgaatggg gcggcctcga aagccgttgt
     5161 ggcctccggg tcaccgtggg ttcaaatccc acaccttccg ccacctgcac gatgcccggg
     5221 tctcacggcc cgggcatcgg ctcttttccc gttcactttc ccgttcacgc cgccgggacc
     5281 gatgccggac cgggtcagcg gacgttggtg ggatcggaaa gggcaatcca gatcgcttct
     5341 tcatgggacc actcggccaa actgagcgtg tcgcgggcat cagcctttcc aggaccaatc
     5401 gagttgtagg gctgagcggt gaccgaaaat gtcccgagag attcggccgc ttccctaaat
     5461 gagtcattgg tgaggtccgg acctgctgcc gttgcgatgt agcggaacag ttcgaaggac
     5521 ttgcagacgt tcatggatcc ggcccagtag ttcgtctggc ctggctcaag gaggttaggg
     5581 gagagaacct ccaagccgag agcaggttcg atgatcgaca tgcactcggc agtgtccgga
     5641 tcctctgatg attcgaatgc cctgttggtc agcaactggc cggcgctctc gataccttcc
     5701 ggcggactat ccatccagct attggttgag tcaccgttca agatgagcac ggtgaactcg
     5761 tcacccagcc ggaacaggta ttccatcgca tagttggctt ctccaacaaa catgatcgtg
     5821 gatacagcct ctgagcgagc tcgctcaagc agaacctcga gaaaggcaat agtggccgtc
     5881 tcgtcgccgg tattcgtgtt tgcaacactg atcggcacct gcatgtccac ttcgatcagt
     5941 gctgccttgg tgtcggccat gatcgcttcg tactcggcat tggcgccgaa gatcatgatc
     6001 ggtcctagac cgtcgaggcg cccggtctca cgaagaaggt tgacgaatgc cctacccctc
     6061 cttccaagac tcatgtcgta ggagatccat ggtgcagttg attccgcaag ttgttcgggt
     6121 gttggcttac ccccgatcag gatcgtgtcg taggtcccag gaaaacaaag gttcgtgctc
     6181 tcggcgccag gtccagcaaa gccattgagg acaacgaaca ccctgtggtc ctcggctaac
     6241 tcgacgcacg tcgtctcggc cgaaaccgga cccaccggta ggaaatggct gtggactagt
     6301 tcgatcatgc gaccgtgaat gccaccggtg gaattgatgt gggctacata ggcgtccacc
     6361 atgtcgtcat agttggcata cggcagcggg atcccgtagg tctccgtgaa cttctcgaag
     6421 tcgatcgagg caaacccgac cttgatggtc tcggcggtca caccccggaa cgaatcggtg
     6481 aggacgatcg gcgcctcagt agtcgtcgtg gtcgttcccg ccggggcctc agtggtggtc
     6541 gttgcgtcta gcggctcatc cggtggatct gtggttgccg gaacggccgt cgtagtcgac
     6601 gcaatcgtcg tcgttgctcc agcagtggtt ggtgccggtt ccgccccgtc agtgccgcct
     6661 ccaccgcagg cccccgccat caaggccaat gccaccaaca cggcgagcgt ccaacggtgc
     6721 ggatttcctt tggccatggt ccccccagac ttggtcctcg tctgccgacg acccactggg
     6781 acgccatcca ttgtcaaacc gtaggcgctt gggagtggtg ctgccatccc aaggacccgc
     6841 tcagtgaact ctccccggga ggtagttagg agaaaggcgg gcgcgggtgg tcttcctggg
     6901 gctgagtcct tccgtcgact cgaacaggga tcgagccgcc atacgctcgg ccgtcaggtc
     6961 gtcccatggt tcatcatcga caccgacccg tccagctgac tcacgcaacg ctttccaatc
     7021 ggtcaaggag cacacccact agatggtcga cagtggtcga cggttccggc gacaaggtca
     7081 gtcggccgtc gcgcactagt gcggcgtacc cggtcgtgat ggctagttgc agacggaccc
     7141 agtggactcg attctcggta tcaaggccta gcgaggtcag cacggtctga agtggtccgc
     7201 cagcccgttc gattgacgcc accagttccg gatcgttgcc tggtgggtgg accgtggcct
     7261 cggaccggcc cgggtgcgcc aacgcgtggt ccaactgcgt tcggacaatg gcctcgaccg
     7321 cgtctcgtcc cgagcggcca actgccgctg tcgtgaccag accagccaac tcgtcgaggc
     7381 acaacagtgc tagcaggcga cgcagtccag cggtcccgtc tacgtgggcg tagagagact
     7441 ggctgcgaat gcccagtcga tctgccacag cagaaggtcg aaccgcttcg agacgaccag
     7501 cttcgtccag catcgccagt gcggcctcgg ccacctgttc tgacgtgact ccccggcgcg
     7561 ccgccatagc cgtcgattca accccctgtt gccgactctg tcaacatctg tcagacttga
     7621 gtctgatgaa tgtagacagt ctaaacgacc caacctccgt cctgcttcaa gtcgacgacg
     7681 gtgccgacct agtgaatgca ctagctgaac acggctgggg ggacggcctc cccgtgatcg
     7741 cccccacccc cgagcgggtc gatgccatgc tggccgggaa ccccggcgac gctgtcatcg
     7801 ccgtacttcc cccccgcttc ggcgaggcca cccgacgaac cctggccatc aacgcggtga
     7861 tggccggctg cctcccagcg cacctccccg tcctggaagc cgccgtcagg gcactgtccc
     7921 aacccgagct gaacctacgg ggggtgaacg cgacgaccca ctgcgtggcg ccactgctga
     7981 tcgtccacgg cgaaatagcc cgcaccgccg gctaccacgg cggcctcgga gccttcggtc
     8041 ccggcaaccg ggccaacgcc gctaccggtc gagccatgcg cttggtgctc ctccatgtgg
     8101 ctggagccac gcccggggac ggcgacgcct ccactcaggg cagcccagcc aaatacggct
     8161 actgcgtggc agaaaatgtc gacgcctctc cgtggcccgc ctacccgaca accatcggcg
     8221 tggatacggc ctcggcggtg accgtgcact gcggtgaggc gccccacaac gtgcatgaca
     8281 tggaatccga cgacccggca cgcatcctcg acaaggtggc ctcggccatg gccaccacag
     8341 cccagaacaa cgcctgcatc agccagggcg agtacctggt ggcgctctgc ccggagcatg
     8401 ccgccacatg tgccgatgcc ggttggtcgc gtcgtgacgt ggtgtcctac ctgtttcaga
     8461 aggcccgcct tccggccgcc gaactcaagc gggcattcac cctccgagcc tgggaaccat
     8521 ggatggaacg gcttggcgac cacgaccccg ctccaatgac cgcccacccg gacaacatcc
     8581 ggatcctcgt ggttggtgga cccggcaaac acagttcggt gattcccagt tggggcatga
     8641 cccaaagcgt gaccctgccc atcctttcga agaccacctg tccagaagca ggtctcgact
     8701 catgttgatc caccggcctg acggcgacgt tgccacgccc ccagcccagc gggctccttc
     8761 gccgacggtg ctggccggat gccgtattgg catcctggac aaccgcaagc ccaacgccga
     8821 cgtcctgctc gagcagctgg ccatgcggct cgctgagcgc accggagcca ccgtggtcca
     8881 cacggcaacc aagaacgctg ccattccctg tggggatcag gttctcgacc tactagctga
     8941 ggaggtcgac gtgatcctca ccggcaccgc tgattgagga agttgtacgt cgtggagtgt
     9001 ccacgactct gtgaagctcg aagcagctgg ccggcccacc gtcctggtgg cgactggggc
     9061 cctgcgggaa ctggctgacc agacggccta cgacctgggc ctggctgacc tgcgggtggt
     9121 ctcggtggct catccgatcg ggggcgtcga ccctgacgag atccggcggc gggccgatgg
     9181 cgtggtcgac gaggtactga cgctgctcac cgtcaccacg ggaggtaacc catgaccatc
     9241 accattgacc atggtggccg acgtgcactg gtcaccggtg ccggtgccgg catcggacga
     9301 gagatcgccc gctggctggc tcgcgctggg gccgacgtgg ccgtcaacga cctggtgccc
     9361 gagcgggccg aggccgtcgt cgcggagatc aacaccgagg ccggaacgtc agacggttcg
     9421 ggtcgagcag tggctgtgcc cgccgactgc cgggacgatg aggccgtgga atctctggtt
     9481 accgccaccg tcgaccacct cggcggactg gacctcgcgg tcaacaacgt cggaatgctg
     9541 cccccagggc gacgaccaca gcccttcgtg gccaaccggg ccgacgactg gcgcgacatc
     9601 gtcgaccaga acctggtcgt ggctgccctg tgcgcccgtg ccgaggccga ggccatgctg
     9661 caggccagca ccaacgggtc gatcctgttc gtgacatcgg gtgagaccac ccggccggcg
     9721 ccctacaacg cggtctacgc cgcggcgaag gccgccatca accacttggt gaccaccatg
     9781 gcggtcgagt tgggtccgaa tgggatccgg gtgaatgcca tggcccccgg gaccacactc
     9841 accgaaatgg tggcccccgc gttcaccaag gaacgagtga ccgctctggt ggcctcgaca
     9901 cctctgcggc gcatggtcga acacgatgag ttggccagac tggccgtatt cctcaccagc
     9961 gacctggccc ggtgcatcac tggacagttc gtgctggctg atgccggggc gttcctgtcc
    10021 cgtagccgtc cggccaacga cgagggcttg gtcaacccac tggggggctc caacgccagc
    10081 tgagttgaga ggggtcttcc cagtccacgt gtcgggggat cagagtccca tctggtggtg
    10141 gggtgggagg tcccgacggt cgatagcgtc ggcccgccgg tggagcaggt cgatggtggt
    10201 atcgagatcc cgggcgatca cgtactgacg ttgtgacgcg cactccacga cccaccgacc
    10261 catctcgtca aggtcggcga ccttgatctc ccggcccgct ttctctagaa gatctttcat
    10321 ctgagtgaag gtcatcgatg cccgaccggt acctccccgc acccgttcca gttccgtcgg
    10381 acggttccgg taggaggtaa acagacccgt gtccattagg ccccctgacg ggtagaaaac
    10441 cgacgcaccg accacttcgg agtcctcggc caactggtgg gcaagagcct cggtcagaca
    10501 actgactgct gccttggatg aggcgtatac cgcggcgttg ggaaccgggg caaaaccccc
    10561 gtcgccggac gacgtgttca ccacgtggcc aggttcaccc gactcgagca tccgtcccac
    10621 aaacgacatg acgccattgg ccacgccgaa cacgttcacc gagtagcacc aacgccaatc
    10681 gttgggctcg tgagtccaca tccgtccacc accgcctgaa cccacgccag cgttgttgaa
    10741 cagcaggttg cagcgaccgt gggtggcgta gacgtggtcg gccagtgcgt cggtggacgc
    10801 gtcattgatg acgtcggtga ccacaccggt gatccgaccg gggtggctgg ctgagagggc
    10861 ggccaccgtc gtgtccagca cgtcctgttc gatgtcagcc accaccacgg tggcaccggc
    10921 ctccaataga ccccggacga tgccccgccc gatgccatta gctccaccgg tgaccacggc
    10981 gaccgagtca gcaacctcca acggcgtcag gccactcatg ccacctgcac ctgattctgg
    11041 ggcgccatgc cagggcagcc cttggcggtc tcggggatat tgccgtaggc gatgcctgac
    11101 gccacgtggg ccttggtcgg acagtgctgg tcggccaggg cctgcagggc cgcaacgtcg
    11161 aaccggtaca gcctcgccac attggtggtc aggatctgcg tggcctcgtc agcggtcatc
    11221 tctccgaatg tgagccgcaa gtgctcatcg gtattgggat gcgagccctc gatatggggg
    11281 tagtccgatc cccacatgac cttgtcgaca ccgatctggc gcaccacggc ggcctcggtg
    11341 ggtcgcagga agctggcacc cacgtggcac tggcgctgcc agtactccga cggggtgagc
    11401 gacatctcgg cgacggccgc accgccaaag atggcctccg atccgtactt cgaggtcttc
    11461 atccggtcgt agaagtcatc gagacgggcc agggtgtccg gtacccaggc cgtcccactc
    11521 tcggtgttca cccactgcaa gtccggatgg cgctcgaaca cgcccgagaa catcaggtgc
    11581 catagcgccc gctggctcca ccaggtcacc tccagcatga acatggccaa cgaagccggg
    11641 aaatggttcc cgaagttagg ggtggcccca cccgagtgat ggttcaaggg cataccacac
    11701 gcttcggcgg cagcccagat aggtcggtag gcctttgagt agagcggctc aaacggcgaa
    11761 tcaggcggcg tgccaggaag caggatgccg cctcgcaggc cgttctctgc cgcccactcg
    11821 atctcggcca ccgacccctc gacgtcgccc aagaaaattt gaccgatacc ggccctccgt
    11881 tccggtgcct cggatacgaa atccagcagc caccggttgt gagccctcag gccggcccac
    11941 cggtggccgt agttgtcgct gtaggcgggg gcctcgaact gactggctgc cgccggagca
    12001 aagggcggtt gggtgttagg gaacagcacc gcggccacca ccccatcggc ctcctgctcg
    12061 cgcaggcgac ggtcggagtc gtagttgcgg tttccgtcga cagccgggtc gccgtcgacg
    12121 cccacattca ggggtgaccg ctcagcgtcc ttgaacacct cagcggtccg ccgctcaccc
    12181 tcctcgatgc tgcgggccca gtcgtcaaag tcctcgtggt accgcttctc gaggtactcc
    12241 ttgtagtccc acagggcggc accgcagtgg gtatccgccg agatgaccac gtggtggtcg
    12301 gacctgttcg gctcctgatt gctctgctcg gacactgttc gtcctccgtt tccctactcg
    12361 cccgggtatc ggtaccaggg cgccaatctc agaaatctgg tctcagccgt actgcatctc
    12421 gcagccgtac tcgtccagcc accaacgggc ggtgcgggtg gcgtcggaag cagtgcgcac
    12481 attcggcgac tgtcccaggt ctgcgggggt aggaccaatc cggtcggcca cggcttgcag
    12541 gccggcctcg tcgaggccgt agcagtcaac cgcgttcagg cccagtaaac gacgggtgtc
    12601 ctcgatggtc gcatcctgga agtcgttcct caggcgggcc cgggtgttgg gccacgaccc
    12661 ctcggggtgc gggtagtcgg tcccccacat gagggcatcg ataccgttga cgtggcggcg
    12721 acggacctcc tcgcgtgaca tggtcgaggc gccgatgaac acgttttcgc cgaagtactc
    12781 cgacggcagg cgggagatca ggcccttcat ccgggaaccc atcttcttga tcttgaaact
    12841 ggcaccgaag ttcacgtcgg ccttccacag caggtcgcct acccagaaag acccacactc
    12901 caccacggca taccgcaggt tcgggaactt gtcgaacttc cccgagaaga ggagttgcca
    12961 gaggatccgg tgggtccaga acgggacctc gctgatgtac atggccacgt tgtcgccgta
    13021 ggcgtcgaag tcggcttccc ccgaatgtgt gtggaccacc aggccggcat cggcgcacgc
    13081 cgcccagaag cggtcgtagt ggtccgagcc gtagggcggg tggccatgcc acagggtcgg
    13141 gaccattacg ccgcggatac cgggcttgcc ggccagtgct tcgacctctc tgactgcttc
    13201 gtccacgtcg tggaccacag gtaccagcgc tacgccggcc cgacgtaccg ggtcggtggc
    13261 acagaactcc tccaaccagc ggttgtgtgc gcgggcgccg ccgaaggcct ggcgggcatc
    13321 agttatctgg ccggcggcca gaccggcacc gaagggcggc gactcctgac cggtcaccgc
    13381 atcaccgtca gcgaagatga tctccccggc caccccgtcg gcgtccagca ctggatcacg
    13441 cacctcgggg tcgtaggcac cctgcagacc ccactcgtta tcgccctccc attcggcgat
    13501 gaactcagcg ttaacctctt cagcaatctg gcgatgccgg tggcgttcgg ctacgtagac
    13561 gtcgaactcc tcatgcagcg atgattcgag gtagggccgg tactcctcgc actgcagacc
    13621 ggcatgggtg tccgacgaga cgacgacgta cggctcgctt cctgtgctga cttcccgttc
    13681 catcgtgtac tcccccgggc cctgcccgtg cctatggacg accaccctcc ttggacagcg
    13741 tcacatgatc tcttgtacac tgtcgcagag aacacgtccg atggcaaccc gggcggacga
    13801 cggagatctc atggccaccc agccacctca ccaagcagtt ccccagagtt ccggaagcga
    13861 tgtcggtccg ggccgtcgag ccgggttgga tgccggcgag atcctcgacc gggccattgc
    13921 tctggtggag gacgagggcg ccagtgccct gaccatgcgt cgactggcag ctgagttggg
    13981 tgtagccacc acttctatct actggcacgt cggcaaccgg gacgacctgg tcaccgcgct
    14041 agtcgaacgc cacggcgagc gtctggccca gcaacaaatc gagggcgaaa cggcccgcga
    14101 ccgagtgcag gccgtggccc ggatgatctg gagcagcgcg gtcgaccacc gggaggtcac
    14161 ccgactagcc gcggcggccg gtgcctcgtc actgcacgcc cgccagctgg agttggccat
    14221 ggcccgcgaa cttcaggatg cgggtgtggt cggcccgacg gcccgggacg ccatgcgggc
    14281 catcacagcc tgcgtcggag ggttcatcgt ggccaccctc atcgatgacc ggacgccttc
    14341 gtccctgcgg aggacgtcag tgctgggggg agcggaatcc actggcctcg aactgtccac
    14401 cctcgaggcg ctggccgaac cggccgatct accctccctg ttcgaggcca ccctgcgagc
    14461 cgtcgtcgac tcggtagtgc ccgccgacct ctcagccaac gcctacctct aggcccactt
    14521 acaggtcgcc cgtttgtcgc agagcgacgg gatgctgacc gccgggcgac cagcccgttg
    14581 tagcgacccg gcgttcaggc gtcgtagttg tacgctgtgg cctgtggctt gaccggacgg
    14641 gccatccata gtgggcgccg caggttccct ggtccgggcc cgggccgggt cttggccaac
    14701 cactcctcaa agattcgatg tgaggccgcg gtgtcgacca cgacgtcacc gtaggcgtcg
    14761 ccttcctcag cgggacccac ggtgacccgc tgcagccagc agtgcatccc gctgatcggg
    14821 tcaggctgca cggggaaggt caggttctgg tgcacgccgg tgtcggtcca ccagatcagg
    14881 ccggtgtccg ggtcgtcgct ctcataggcc tctgctccat gctcgcgccg caggcgccag
    14941 cgaccgtcgt cgtcctgtcc gatggacgcc ttgccggccc cccaggatcg ggcctcatcc
    15001 tcttcgaggc gccaccggcc catgtggtgg ctggccgcca ccactccggg acgaatcccc
    15061 tcggtccgcc acgactggat cacgaagtgg ccggtccgcg tggtgattcg caccaggccg
    15121 ttctcgtcaa tgcccagttg ttcggcgtcc cccgggtgca accacagcgg gtgtcgatgg
    15181 ctgatctcat tgagccactg gctgttggcg gaccgggtgt gtatgagcgt cgggatccgg
    15241 aaggtcggca cgaggatccg ctctccggcc gtcatgtcca ggtcctccca gtggacctgg
    15301 ctacggatga acgcaggcat cgaatactcg ggccaacccc agtcccggat ggtctctgag
    15361 aagaactcca acttcttgga cggcgtcggg aagccgaact tcgcctcccc gtcgatgtcc
    15421 acggccggtg agccgtctcc gatgaatggc atgtggccgg tgatctcgtc tagcgagttg
    15481 tgcgagccag cggtgcctgg gcgtcgccac acgccagctg catcgcgtac cgctccgttc
    15541 aggtcgtcct cggacacctc ccgctcgtag acctgcgtct ggtcgcctgg cagggcgaac
    15601 gatcccttgc gtcgcatgta ctccagcggg gtcagaccct ctttggccgc tgcctcgggc
    15661 agcccgggga ccgaaccctc gaacagcatc gagtagtact cgtcgaggct gagcggggcg
    15721 cccggatcag tctggctctc gaactgctgg cggatgccga gcgccccgtc ggggtcgatc
    15781 cgccacgaca ggtcgatcca gaactcctgc tcctcccaca cctcgcccgg gttggcctca
    15841 tgcgtgcgct cgaaggtctc gccctctagt tcgcgatggc gacggttcac gggttggcgg
    15901 aaaccgatcc atcgcccgtt gtgggtctca aagctggata cgtcgtggcg ttcggacgct
    15961 atgcccattg gcagcacgta gtcggcgaac cacgctgact cgttccatgt cggggtgagc
    16021 gccacgtggc agccgacgag ctccgggtcg cgcagcacct ccatccaggt gaacccgtct
    16081 gggttggtcc acagcgggtt gtagacccgg gtgaagtagg tatcgatgcg gccccgaccg
    16141 gccttcagga aatggggcag cagaatcgac agctcatggt ggctgagcgg gtactcgatc
    16201 ggccactgca tctcattcca ccgggcctgg ggcttggggt ggatcggggt gacggggatg
    16261 aacttgttcc acccgttggc gttggtgcca ccctcggtgc cgaccgatcc agtcagcacg
    16321 ttcaggaact gcaggcagcg ggccaccatc cagccaccct cgttgccggc tgacgaggcc
    16381 ctccatgtgt gcgacgcgaa ctttccaagg ccgtcgccga tgaccttggc cacctcgagg
    16441 atctggtcct cgtggaggcc gcacacccgt gccgcctcgg ccggggtgta ctcggcatac
    16501 tggtcgatga gggcctggcg aacgttggcg aagttgggct ccaggtcagg tcgggcctcg
    16561 gtgaggaagg tctcccagtt gacccaccgc tcgaagaagt cggcgtccca ggtgtcgtcg
    16621 accagcagca gccgggcaat ggccagcagc atgaccgctt cggtgccggg ccacggtgac
    16681 atccagtggt cagccttggc cgccgtgttg gagagtcgcg gatcgacgca gatgaccgtg
    16741 gcgccgttct tctggccctc gatgatccgt tgggcgtgcg ggttgaagta gtggccggcc
    16801 tcgaggtgcg acgagatgag gaagatgacc tcggcgttgg cgaagtcggc cgaagggcgg
    16861 tcgaagccca tccacgacgc gtagcccacc cgggcaccgc tggaacagat gttggtgtgg
    16921 ctgttgtggc catcgatgcc ccagctgtgg aggacccgct ccatgtagct gtcgtcgccc
    16981 atccgaccaa cgtggtacat gat
//
LOCUS       DASCMR010000056        15268 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000273664, whole genome shotgun sequence.
ACCESSION   DASCMR010000056 DASCMR010000000
VERSION     DASCMR010000056.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 15268)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15268)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15268
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000273664"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..528
                     /locus_tag="QGG16_01395"
     CDS             <1..528
                     /locus_tag="QGG16_01395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23961.1"
                     /translation="DPLGDPTAPHSPTYGVSKVSQEAVARTMARVLDLPTTIARINAS
                     YGPNGGLPAYHGDWVAAGQPVWLRKPGPNAYSPIHEEDMAHQVAALLDAASTPATIVN
                     WCGDDMVTAEDWTAAFGAHLGVDPEIAYYDLPGGQPGSAADPTKRHSLTGPCSIDWRD
                     GMIATLEARAGSTGV"
     gene            complement(559..1830)
                     /locus_tag="QGG16_01400"
     CDS             complement(559..1830)
                     /locus_tag="QGG16_01400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HJP23962.1"
                     /translation="MMNASATGRPLEDLDLSRIDPLWSGPMEDRLDGFSALRRHDPIR
                     FFAEEGNEYLAAGPGYWAVTRHADVVDASRRPDAFCSGEGTNIPDLPPEFREFFGSMI
                     SMDDPRHARFRKIVSAGFTPRMMRSLEDGVVSTASGIVDRVAGLGSCDFVTEVAARLP
                     LVVICDMMGIAADRHDEVFDLSNIVLSQGDPEYIPEGSNPLEAFLAAGAGLSAIMQET
                     AADRRGGDGEDLTSLLVNAEVDGERLTTEELSSFFVLLCVAGNETTRNAISWGLHYLT
                     TNPDQRDRWLADIDGVMSTAVDEIVRMSSPVIHFRRTATADGVRLGDQEFKAGEKLVL
                     WYASANRDETVFVDPDRFDVTRDPNPHVGFGGPGPHFCLGAHLARREVGVMFRELLTR
                     LPDIHATTGPDRLRSNFVNGIKHLPCAFTPA"
     gene            1906..2322
                     /locus_tag="QGG16_01405"
     CDS             1906..2322
                     /locus_tag="QGG16_01405"
                     /inference="COORDINATES: protein motif:HMM:NF024966.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HJP23963.1"
                     /translation="MDLQALADRIAIGDLLTRYATAVDRRDWDGYRSVFTADAMIDYT
                     SAGGIAGNLEEVVEFLSTSLEMFEMTQHLVSNVDVVVDGNSATVTAMFNNPMRLPGGE
                     TWFTGGWYHHDLVRTAEGWRSRDLREESAWFDRTPF"
     gene            complement(2395..3225)
                     /locus_tag="QGG16_01410"
     CDS             complement(2395..3225)
                     /locus_tag="QGG16_01410"
                     /inference="COORDINATES: protein motif:HMM:NF012334.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HJP23964.1"
                     /translation="MIKDLDGRVAVVTGAASGIGLAMVEAFLDQGMSVVLSDVDESAL
                     AVQVDRLAAAVGSTDRVSGMVCDVADADAVTALADTAWSRHGGVHVLCNNAGVGPAGA
                     MLDTTASEWRWTFEVNVLGVAHGVLAFAPRMVDAGVGHIVNVASQAGLMTTAFLGMYA
                     SSKHAVVGLSEALYRELELSPVGVSCLCPELVSTAIFDVARVRPDWVDVHETSEATQG
                     SLAELLGDRGISTGLVAERVVDAVRDGRFWVFTHDVTVPAAARRFEDLQTGRNPTDAP
                     "
     gene            3345..4532
                     /locus_tag="QGG16_01415"
     CDS             3345..4532
                     /locus_tag="QGG16_01415"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HJP23965.1"
                     /translation="MPGPLDGIRIVDLSVALTGPLAAGMLVDQGADCIKVEQAPDGDV
                     VRWLGSTVGGISAMFQVANRGKRSLVLDLRQAEGQAILGDLISEADVLVQNFRPGVAE
                     RLGITYDEVAAIRPDIVYADLTGFGPDGPYSHRRVYDTVIQAHSGLAANQTGLNDDHP
                     RFLKQLVCDKITAYTACQAITAALFARERGAGGQHIELSMLDASVAFLFVDGADHEVI
                     LEGDHSGPQSVAANNTPFAFDGGFAAIAVPADDEFHGLARAMRVDSSDPDLATIRDRA
                     ANRHKSTAIHREVRVNATRMTVAEAETRLDDNQVPFGLVRAVEEVIDDPQVVANGLFT
                     EFDHPAAGRVRHHRVPAQFHGTPAVLREPAAPTLGQHSDEVVTETGRGERIDELRMAG
                     VIR"
     gene            4529..5287
                     /locus_tag="QGG16_01420"
     CDS             4529..5287
                     /locus_tag="QGG16_01420"
                     /inference="COORDINATES: protein motif:HMM:NF012514.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HJP23966.1"
                     /translation="MTGTDAGHHRDHRRYDAYARHHAEHGDSLLIPAATVVVLSDGEA
                     GIETLMLRKNSQIAFGGMWVFPGGKIDASDQVVGDDGATDELATAAAAAAREAAEEAS
                     VAVDPAALVWFAHWVPPPVMPKRFATFFFATHHEGPASAVAIDDGEITEHEWMRPVDA
                     LDRRDRGDIELAPPTWMTLHRLKSFATVAEALEVLDAEDPPFYETHMARTDDGPVAMW
                     TGDAGYEVNDPSIEGPRHRLTLVETGYVFTDTRN"
     gene            5384..7783
                     /locus_tag="QGG16_01425"
     CDS             5384..7783
                     /locus_tag="QGG16_01425"
                     /inference="COORDINATES: protein motif:HMM:NF012905.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IC family P-type ATPase"
                     /protein_id="HJP23967.1"
                     /translation="MDAETAVTDLTNGLTAGEVADRVADGRVNNVPDAPVRTTGEILR
                     ANVLTPVNAIMGALLVLILVAGFPGDALFAGVIVSNSVIGTLQELKARRTLNELTVLS
                     APRARVIRDGDTLDLAVSGVVADDLLLLSPGDQVVVDGTVVDAAGLEVDESLLTGEAD
                     PVDKAVGDEVLSGSFVSAGSGLYRATHIGSGSYAATLAEEARRFTLVGSELRSGVDLV
                     LRWLTMVIPPAAGLLLLRLLVTEDLWQEALRGTVAAAVAMVPDGLVLLTSLSFIVGVI
                     TLARRRALARELASVELLARVDTLCLDKTGTITTGEISLADLEVIGATTAADAAAAVG
                     AMAGADPSPNPTLVALATALPNPGWTVVDAVPFSSARKWAAATFAPHGLDDASRVVHH
                     LGAPDVLLPVGEWSVARDRVTELADDGHRVLVVTRSSYDPDAPADELPSARLPLCLVL
                     LTDTVKAEAPEILAWFVEQGLDLKVISGDHPATVAAVARRAGIPGAEEGVDARTLPDD
                     PEMLAEALTGDLVDRSVFGRVTPHQKQAMVRALQARGRTVAMTGDGVNDVLALKDADM
                     GIAMGSGSSASRAVAQLVLLDDRFSTLPRVVAEGRRVINNIERVANLFLTKATYAVLL
                     TVLVGLFGVPFPFLPKQLTLIGSISIGLPGFFLALAPDDSLVRPGFLPRVLRWSLPAG
                     VAASAATFVCYEVVRRSDASLAEARTAATLTLLGVGLAILLGISRPLRPWKLALAAAM
                     GGLYAVTMAWPFARDYFELVVPPDSAWLTAAICVAAGGLLVAAAPRITALLLRGRVRG
                     R"
     gene            7841..9109
                     /locus_tag="QGG16_01430"
     CDS             7841..9109
                     /locus_tag="QGG16_01430"
                     /EC_number="1.4.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012434.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Glu/Leu/Phe/Val dehydrogenase"
                     /protein_id="HJP23968.1"
                     /translation="MSDSQTSLFATALDQFNRGADLVDLSDDLRSILSQPKNEIIVNF
                     PVRLNDGTYRVFRGYRIQHSNLLGPYKGGVRFHPMVDLDEVKALASWMTWKSALCDIP
                     FGGAKGGISFDPDGLEPDELERVVRRFTHALGGNIGPDHDIPAPDLGSNAQSMVWMMD
                     TYANSTGVTERQNVKRIVTGKTLETGGSPGREKATGQGVVFCLQHWADEVGFDLAGAT
                     VSIQGFGNVGSATARILQVHGARVVAVSDHAGTVADEDGIDAFELTDWVSERGSVAGF
                     PGGMWIDTDDFWTVPADIVVPAALENQITADNAGRIQAKVIVEAANGPTTLDAERIRA
                     QRDIDVLPDILVNAGGVVVSYFEWLQNRSAERWDLDDVDFKLRETLWKACDAVVDLRA
                     ELEVSSRRDAAYAVALRRLQVVYGQRGIFP"
     gene            complement(9130..9309)
                     /locus_tag="QGG16_01435"
     CDS             complement(9130..9309)
                     /locus_tag="QGG16_01435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23969.1"
                     /translation="MDHQFGNAQQADGCPKAWFDGVEFRGLPSRDRPIPVRLDRGGGV
                     AAGVKSLDEGVDERA"
     gene            9301..9804
                     /locus_tag="QGG16_01440"
     CDS             9301..9804
                     /locus_tag="QGG16_01440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23970.1"
                     /translation="MVHVPAVTDGPVAINDQKPDAWAAACEAPMMEAIGVARAVGSLV
                     DLGDPGPQSGPLRLVWILPTTALGGSAGFVGVSAAGEGIRALAKGAARQWGSSCTTAV
                     LAVSPTLLFDGSGPPDEGSLSPPALGGPGDVATDVASLVDLLADPRSRFATGGTLVAD
                     GGSWMAP"
     gene            9801..10586
                     /locus_tag="QGG16_01445"
     CDS             9801..10586
                     /locus_tag="QGG16_01445"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJP23971.1"
                     /translation="MNASTGPSGAGLLDGRVALVTGGGAGIGLGLATAMARHGASVVL
                     ASRRSETGEAAAVELRAEGLQASWVRCDVTVPAEISAAVLSTAENLGRLDCLIHNALD
                     GAAGGPLEEATDEGWATLAATSVRASYDCARIAHPHLKATGGSLVLLTSAAGMEGSEA
                     RPLYAMAKAAQRGFAKGLAAEWGPDGIRVNCIAPVAMTPALAGAIRHDPSLGERLVDR
                     TPLGRIGDPVDDVGPVAVFLAGDLSRHVTGQTVVVDGGGFRGL"
     gene            complement(10630..10968)
                     /locus_tag="QGG16_01450"
     CDS             complement(10630..10968)
                     /locus_tag="QGG16_01450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WhiB family transcriptional regulator"
                     /protein_id="HJP23972.1"
                     /translation="MSDAAANLYVDSQEMRWVDDVLCRDKSDLFFAPFAERPEARVRR
                     EARAAQLCAACPVMESCKQHARENRELGFWGGESEAERATAGFAPTTPIIGRRQVAAR
                     RAAAALAEVG"
     gene            11341..12354
                     /locus_tag="QGG16_01455"
     CDS             11341..12354
                     /locus_tag="QGG16_01455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23973.1"
                     /translation="MQDQTPKHQDGPYFEELSVDQVFDPAPAVTIGSGEAAAYQAICG
                     DPLATSLSRPLAEAVTGRPGALVNPALVLHVSIGQSTVATRTVIANLFYRGVALRRTV
                     RLGETLQSNVTIRGLRELSRRDDRPARGLVLLGIRTTCLDDGATVADYERCAMLRFRD
                     PEAVTAHDDDLGGADPDIDLAAWNDLIPDGWDTAPLRAAAATTSTWTRGTPVMDPMRD
                     TVTSAPELARLTQNLAPVHRDPSLGPGGRRLVYGGHTIGLAQASLTRLLPDTATVLGW
                     QSCDHPAPVFEGDVLSFRHTLLDEQPAAGGRLRALQTVVDAQRSNGSSESVLDWRLVT
                     WGA"
     gene            complement(12351..13577)
                     /locus_tag="QGG16_01460"
     CDS             complement(12351..13577)
                     /locus_tag="QGG16_01460"
                     /inference="COORDINATES: protein motif:HMM:NF014564.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HJP23974.1"
                     /translation="MVTAPLAGLSVVEGTAFVAAPSGGMTLAQLGADVIRFDQVGGGI
                     DHRRWPLTADGVSLYWNGLNKGKRSLAVDLRDGEVTELLTELIAGAGNFLTNFPARGW
                     MDPERLTTRSRELGHDDLVMVVVTGSHDGTTALDYTVNCAVGYPSLTGHPDDPRPVNN
                     VVPAWDLVCGQMAATGLLAADRRRRLGGGGGLVTIALADVALATVGALGNLAEAQVNG
                     TERDRVGNAIYGAFGRDFVTSDGRRAMVVAITAKQWSGLQAATGTADVVAALADELEV
                     DLGDEGERYLAMDRLCALFEPWFAERTLTEVATALDEHEVCWGPYRSVVQMVAEDPRA
                     STDNPLFAELDQPGVGRHLVPGSPLAFGGADAVDRGAMVAPRLGQHTEEILTGELGLS
                     AGALGALVDRGAVALG"
     gene            complement(13601..14050)
                     /locus_tag="QGG16_01465"
     CDS             complement(13601..14050)
                     /locus_tag="QGG16_01465"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF012787.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_except=(pos:complement(13919..13921),aa:Sec)
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HJP23975.1"
                     /translation="MLDVGTKAPDFSAPDQDGELVTLDSLRGHWVALWWYPMASTPGU
                     TVQGGGFRDRTPEFEEAGVVVLGASFDTVEAQKHFADDQGFPYRLLADTTKEVGQAYG
                     VEAEHGLPLRVTYLIDPEGTIMRVYDLKGQDLEAHAGMVLDDVRTLS"
     gene            complement(14173..>15268)
                     /locus_tag="QGG16_01470"
     CDS             complement(14173..>15268)
                     /locus_tag="QGG16_01470"
                     /inference="COORDINATES: protein motif:HMM:NF012398.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HJP23976.1"
                     /translation="LDRAELPVTQAASALGPAGLVGAAVYRRPVGVVACITSYNFPLV
                     NVAGKLAPALAMGNTCIIKPAPQDPLAVLRLGEAVVEAGLPPGVVNVLTSSGTEAPAA
                     LVSSPDVQMVSFTGSSAVGARIMADGASSMTRVLMELGGKGALVMTDDVDVSKAVGAI
                     ASVWGFHSGQICTAPTRVICHRSKVDELVSTLGAVAGMLKVGDATERDTLVGPLVSEA
                     QRDSVESFIRGGVDAGATLVCGGERPDLPGYFVAPTLLADCTADMHAVREEAFGPVVV
                     VLAHDGDDEAVSLANDSDYGLYSYVYSGDNARALQIAQQIQTGNVALNSVVPHPDAPF
                     GGFKRSGIGRDRGIAGLEAYSEVQSISWLA"
BASE COUNT         2513 a         5408 c         4901 g         2446 t
ORIGIN      
        1 gacccgttgg gtgacccgac cgctccccac agcccgacct acggcgtctc caaggtctct
       61 caggaagctg tggcccggac catggcccgc gtcctcgacc ttcccaccac cattgcccgg
      121 atcaacgcca gctatggacc gaacggtggc ctgcccgcgt accacgggga ctgggtggcc
      181 gccggccagc ccgtgtggct acgcaagccc ggaccgaacg cctacagccc catccacgag
      241 gaggacatgg ctcaccaggt agccgccctc ctcgatgccg catcgacccc ggccacgatt
      301 gtgaactggt gcggcgacga catggtgacc gccgaggact ggaccgcggc gttcggtgcc
      361 cacctcggtg tcgatcctga aatcgcctat tacgacctcc cgggcggaca accagggagc
      421 gctgcggacc ccaccaagcg ccattccctc accggaccgt gctccatcga ctggcgcgac
      481 ggcatgatcg ccaccctcga agcccgcgcc ggctccaccg gcgtctgact gcccgccctg
      541 ggcacgggcg ccgggctgct acgccggggt gaacgcgcag ggtaggtgct tgatcccgtt
      601 gacgaagttg gatcgcagac ggtcgggccc ggtggtggcg tggatgtcgg gtagacgggt
      661 cagcagttcc cggaacatca ccccgacctc acgacgggcc agatgggcgc ccagacagaa
      721 atgggggccc gggccaccga agcccacgtg cggattggga tcccgggtca cgtcaaaacg
      781 gtctgggtcg acgaacaccg tctcgtcccg gttggccgag gcataccaga gcaccagctt
      841 ctcgccggcc ttgaattcct ggtctccgag ccgcaccccg tcggcggtcg ccgtgcggcg
      901 gaagtggatc accgggctgg acatccggac gatctcgtcc accgcggtgg acatcacccc
      961 gtcgatgtca gccaaccacc ggtcccgctg atccgggttg gtggtgaggt agtggagacc
     1021 ccacgagatg gcgttgcggg tcgtctcgtt gccggccacg cacaacagga cgaagaagga
     1081 ggacagttcc tcggtggtga gtcgctcgcc atccacctcg gcgttcacca gcagtgaggt
     1141 gagatcctcg ccgtcgccgc cccgccggtc cgcggccgtc tcctgcatga tggccgacag
     1201 ccccgctccg gctgccagga aggcctccaa cgggttagag ccctcaggga tgtactcggg
     1261 gtcgccctgg ctgagcacga tgttggaaag gtcgaacacc tcgtcatggc gatcggcggc
     1321 gattcccatc atgtcgcaga tcaccaccag cggaagccgg gccgctacct cggtcacgaa
     1381 gtcacacgag ccgagtccgg ccactcgatc cacgatcccg ctagccgtgg acaccacccc
     1441 gtcctccagg gaccgcatca tccgtggggt gaacccagcg gagacgatct ttcggaatcg
     1501 agcgtgacgg gggtcgtcca tgctgatcat cgatccaaag aactcccgga actccggcgg
     1561 gaggtcgggg atgttggttc cctcgcccga gcagaacgcg tcgggacggc ggctggcatc
     1621 caccacgtcg gcatggcggg tgaccgccca gtaacccggg ccggcggcca ggtactcgtt
     1681 gccctcctcg gcgaagaacc ggatcgggtc gtggcgacgc aacgccgaga agccgtccag
     1741 ccgatcctcc atcggaccgg accagagcgg gtcgatccgc gacaggtcga ggtcttcgag
     1801 cgggcgcccg gtggcagaag cgttcatcat gggcgagacc ataggcacag gattgggtcc
     1861 gggcccgatc cggtatccat ccgatctcag ttctagattt cccccatgga ccttcaggct
     1921 ctcgccgacc gaatcgctat cggggacctc ctcacccggt acgccaccgc ggtcgaccgt
     1981 cgcgactggg acggctaccg cagcgtcttc accgccgacg ccatgatcga ctacacctcg
     2041 gccggtggga tcgccgggaa cctcgaggag gtcgtcgagt tcctgtcgac ctcgctggag
     2101 atgttcgaga tgacccagca tctggtttcc aacgtcgacg tggttgtcga cggcaactcg
     2161 gccacggtga ccgccatgtt caacaatccg atgcgcctgc cgggcggcga aacctggttc
     2221 accggcggtt ggtaccacca tgacctcgtc cggaccgccg aggggtggcg aagccgcgac
     2281 ctccgcgagg agagcgcctg gttcgaccgg actcccttct gatctgacgc ttcctctaga
     2341 tacgtgctgg gcggctgagg aacaggcaca gccttgactg ggaatccagg ccggtcaggg
     2401 ggcgtccgtc gggttccgtc ctgtctgaag gtcctcgaac cgtcgagctg ctgcgggcac
     2461 cgtgacgtcg tgggtgaaca cccagaaccg gccatcgcga accgcgtcga ccacccgttc
     2521 agcgaccagt ccggtgctga tccctcggtc acccagcaac tcggccagcg aaccctgggt
     2581 ggcctcactg gtctcatgaa cgtcgaccca atcgggccgc acacgggcca cgtcgaagat
     2641 ggccgtcgat accagttcgg gacacaggca cgacacgcca accggtgaga gttccagctc
     2701 ccggtagagc gcctcggaca ggcccaccac ggcgtgcttg ctagacgcgt acatgccgag
     2761 gaaggcagtg gtcatcagac cggcctggga agccacgttc acaatgtgcc cgaccccggc
     2821 atcgaccatc cgtggagcga aggcaagaac gccatgggcc acgcccaaca cattgacctc
     2881 gaaggtccat cgccactccg acgccgtggt gtccaacatc gcacctgccg ggccgacccc
     2941 tgcgttgttg cataacacgt ggacgccacc gtgacggctc cacgctgtgt ccgccagagc
     3001 agtgacagca tccgcgtcgg ccacgtcgca caccatgccg ctgacccggt cggtcgaccc
     3061 gacggcagcc gccaaccggt cgacctgaac ggccagtgca gattcgtcca cgtcggagag
     3121 cactaccgac atgccctggt ccagaaacgc ctcgaccatg gccagaccga tgcccgacgc
     3181 tgctccggtc accacggcca cccggccgtc aaggtccttg atcatcggtt gctccctccg
     3241 aacggcatca cgacagccgc cattgtcggg caccgtaggt gtcgccagcc gtccgggctg
     3301 tctccggctg ctcccctaag cagcgccccg actaccgtca ccccatgccc ggccccctcg
     3361 acggcattcg aatcgtcgat ctctccgtcg ccctaaccgg ccccctggcc gcagggatgc
     3421 tcgtcgacca aggcgccgat tgcatcaagg tcgaacaggc tccggacggc gacgtcgtgc
     3481 gatggctcgg atcgacggtt ggtggcatct cggccatgtt ccaggtagcc aaccggggaa
     3541 agcggtcgct ggtgctcgac ctgcggcagg ccgagggtca ggccatcttg ggcgacctca
     3601 tttccgaggc cgacgtgctc gtccagaact tccggcccgg tgttgccgag cggctcggga
     3661 tcacctacga cgaggtggcg gccatcagac ccgacatcgt ctacgcagac ttgaccggct
     3721 tcggccccga cggcccgtac agccatcgaa gggtctacga cacggtgatc caggcccatt
     3781 cgggtctagc ggccaaccag accggcctga acgatgacca tccccggttc ctcaaacagc
     3841 tggtgtgcga caagatcacc gcctacaccg cctgtcaggc aattaccgcc gccctgttcg
     3901 cccgcgagcg cggagcaggg ggccagcaca tcgaactatc gatgctggat gcctccgttg
     3961 ccttcctctt cgtggatggc gccgaccacg aggtcatctt ggagggcgac cactcggggc
     4021 cccagtcggt ggcagccaac aacactccgt ttgccttcga tggcggattc gcggcgattg
     4081 ccgtccctgc cgacgacgag ttccacgggc tggccagggc catgcgggtc gacagctcgg
     4141 accccgatct ggccaccatc cgcgaccggg cagccaaccg ccacaagtcg acggccatcc
     4201 accgggaggt ccgcgtaaac gccacccgca tgaccgtcgc cgaagccgaa acccgcctgg
     4261 acgacaacca ggtgccattc ggcttggtgc gagctgtcga agaggtgatc gacgatcccc
     4321 aggtggtggc caacggcctg ttcaccgagt tcgaccatcc ggcggctggt cgggtccgcc
     4381 accatcgggt accggcccag ttccacggga ccccagcggt actccgggaa cccgcagcac
     4441 ccaccctcgg gcagcattcc gacgaggtgg tgaccgagac cggacggggt gaacggatcg
     4501 acgaactccg gatggccggg gtgatccgat gaccggcacc gacgccggcc atcaccgcga
     4561 ccaccggcgt tacgacgcct atgcgcgaca ccacgctgag cacggcgatt ccttgctgat
     4621 cccggcagcc accgtggttg tgctgagcga cggagaggcg ggcatcgaga ccctcatgct
     4681 ccgcaagaac tcccagatcg ccttcggtgg catgtgggtc tttcccggcg ggaagatcga
     4741 tgcttctgac caagtcgtcg gcgatgacgg ggcgaccgac gaactggcca ctgcggcagc
     4801 cgctgcggcc cgcgaagcag ctgaggaggc atcggtcgcc gtggatccgg cggcactcgt
     4861 ctggttcgcc cactgggttc cgcctcccgt catgccgaaa cggttcgcca ccttcttctt
     4921 cgcgacgcac catgaggggc cggcctcggc agtcgccatc gacgacggcg agatcaccga
     4981 acacgagtgg atgcgtcccg tcgacgccct ggaccgacgc gaccgcggcg acatcgaact
     5041 ggccccaccc acgtggatga ccctgcaccg cctgaagtcg tttgccacgg tggccgaggc
     5101 cctcgaggta ctcgacgcgg aggatccacc gttctacgag acgcacatgg cccggaccga
     5161 cgacgggccg gttgccatgt ggaccggcga cgccgggtac gaggtcaacg acccttccat
     5221 cgagggaccc cgccaccgcc tcaccctcgt cgaaaccggc tatgtgttca ccgacacccg
     5281 aaactgatcg ccgggcatca gccccgccgc ccaagccctc ctctcccaag tctcccgatc
     5341 ccggggcagc cgatcccggg gcgtccgcgt accatcggcg cccgtggatg ctgagacggc
     5401 cgtgacggac ctgaccaacg gactcaccgc cggggaggtg gccgaccgag tggccgatgg
     5461 ccgggtcaac aacgtgcctg acgcgccggt tcgcaccacc ggcgaaatcc tccgagccaa
     5521 cgtcctcact ccggtcaacg ccatcatggg ggcgctcctc gtgctgatcc tggtggccgg
     5581 cttcccgggt gacgccctgt tcgccggcgt catcgtctcc aacagcgtga tcgggaccct
     5641 tcaggaactc aaggcgcgtc ggaccctcaa tgaactgacc gtgttgtcgg caccgagggc
     5701 tcgggtgatc cgtgacggcg acacccttga tctcgcggtt tccggagtgg tggccgacga
     5761 ccttctattg ctatctccgg gcgatcaggt ggtggtcgac ggcactgtgg tcgatgctgc
     5821 cgggctggag gtcgacgagt cgctcttgac cggagaggcc gatccggtgg ataaggcggt
     5881 cggcgacgag gtgctctccg ggagtttcgt ctcggccggc tcgggcctct accgggccac
     5941 ccacatcgga agcggttcgt acgccgccac cctggccgag gaggcccggc gcttcacctt
     6001 ggtgggcagc gagctgcgat ccggggtgga cctagtcctt cgttggctga ccatggtcat
     6061 tcccccggcc gccggactgc tgcttctgcg cctgctggtc accgaggacc tctggcagga
     6121 agccctccga ggcacggtgg ccgcagcggt ggccatggtc cccgatggct tggtactcct
     6181 caccagcctc tcgttcatcg tcggggtgat caccctcgcc cggcgccggg cactagctcg
     6241 ggagttggcc tcggtcgaac tcttggcccg ggtcgacacc ctgtgcctcg acaagacggg
     6301 caccatcacc accggcgaga tctccttggc cgacctggag gtcatcggcg cgactacggc
     6361 tgccgacgct gcggcagccg tcggcgccat ggcgggcgcc gacccgtcac ccaatcccac
     6421 tctggtcgca ctggccaccg ccctgcccaa ccccggctgg acggtggtcg acgccgtgcc
     6481 gttctcctca gcccggaagt gggctgccgc gaccttcgct ccccacgggc tcgatgatgc
     6541 ctctcgggtc gtccaccacc tgggcgcccc cgacgtgctc ctaccggtcg gcgagtggtc
     6601 cgtggctcgt gaccgagtga ccgaactggc cgatgacgga caccgggtcc tcgtcgtgac
     6661 ccgatcgagt tacgaccccg acgcccccgc cgacgaactc ccgtcagccc gactgcccct
     6721 gtgtctggtg ttgcttaccg acacagtcaa ggccgaggcg ccggagattc tcgcctggtt
     6781 cgtcgaacag ggactggacc tgaaggtgat ctcgggcgac catccggcca ccgtggccgc
     6841 cgtggcccga cgtgccggca ttcccggtgc cgaggaaggt gtcgatgccc gcaccctgcc
     6901 cgacgacccc gaaatgctgg ccgaggccct gaccggcgac ctggttgacc gctcggtgtt
     6961 tggacgggtc acgccccacc agaagcaggc catggtccgc gccctacagg cccgtggccg
     7021 gacggtggcc atgacgggcg atggtgtcaa cgacgtcctg gccctcaagg atgccgacat
     7081 gggaatcgcc atgggctccg gaagttcggc gtcccgggct gtcgcccagc tggtcctcct
     7141 cgacgatcgg ttctcgacgc tgccccgggt ggtggccgag ggccgccggg tcattaacaa
     7201 catcgagcgg gtggccaacc tcttcctcac caaggccacc tacgccgtgc tgctgaccgt
     7261 cctcgtcggg ctgttcggcg tgccgttccc gttcctaccc aagcagctca ccctcatcgg
     7321 ctccatatcg atcggccttc ccggtttctt cctggcgctg gcgcccgacg actccctggt
     7381 gcggcccggc ttcctccccc gggtcctgcg atggtccctc cccgccgggg tggccgcgtc
     7441 ggctgccacg ttcgtctgtt acgaggtggt tcgccggtcg gatgcctcgt tggccgaggc
     7501 ccgtacggca gccaccctca cccttctcgg ggtggggcta gccatcctcc tggggatcag
     7561 tcgaccgctt cgcccctgga agctggcctt ggctgccgcc atgggtgggc tctacgcggt
     7621 gactatggcg tggccgttcg cacgcgacta cttcgagttg gtcgtcccac ccgactcggc
     7681 ttggttgacg gcggcgatct gtgtggccgc cggtggcctg ttggtagccg ccgcaccgcg
     7741 gatcaccgct cttctcctac gggggcgagt ccggggccgc tagcgtcgcc ggagagaccg
     7801 gggtcaacgg cgatcctcgt cagacccgga gggtctcccc atgtccgatt cccaaaccag
     7861 cctgttcgcc accgcgctgg accagttcaa ccgtggcgcc gacctggtcg acctctccga
     7921 cgatctgcgg tcgatcctct cccagcccaa gaacgagatc atcgtcaact tcccggtgcg
     7981 tctcaacgac ggaacctacc gggttttccg gggctaccgc atccagcatt ccaatctgct
     8041 gggtccgtac aagggcggag tccgattcca ccccatggtc gacctcgacg aggtcaaggc
     8101 cctggcttcg tggatgacgt ggaagtcggc tctgtgtgac atcccgttcg gcggagcaaa
     8161 gggcggcatc tcgttcgacc ccgacggact cgaacccgac gagttggagc gggtcgtccg
     8221 acgcttcacc cacgccctgg gcggcaacat cggtcccgac cacgacattc cggcgcccga
     8281 cctggggtcc aacgcccagt cgatggtctg gatgatggac acctacgcca attccacggg
     8341 cgtcaccgag cgtcagaacg tcaagcgcat cgtgaccggc aagacgctgg agaccggtgg
     8401 aagcccggga cgcgagaaag ccaccggcca gggcgtggtg ttctgcctcc agcactgggc
     8461 cgacgaggtc ggcttcgacc tggcaggtgc caccgtgagc atccagggct tcggcaacgt
     8521 gggcagtgcc acggcacgca tcctccaggt gcacggcgcc agggtggtgg ccgtgtccga
     8581 ccatgccggc acggtggccg acgaggacgg cattgacgcc ttcgagttga ccgactgggt
     8641 cagtgagcgg ggctcggtgg ctggctttcc gggcggcatg tggatcgaca ccgacgactt
     8701 ctggacagtg ccagccgaca tcgtcgtccc cgccgccctc gaaaaccaga taaccgcaga
     8761 caatgcgggc cggatccagg ccaaggtcat cgtcgaggcg gccaacgggc caacgacgct
     8821 ggatgccgag aggatccgtg cccaacgaga catcgacgtc ctgcccgaca tcctcgttaa
     8881 cgccggtggt gtcgtggtct catacttcga gtggctgcag aaccggtcgg ccgaacgctg
     8941 ggacctggac gacgtggact tcaagttgcg tgagaccctg tggaaggcgt gtgacgccgt
     9001 ggtcgacctg cgggccgaac tcgaggtgag ttcgcgtcgg gacgccgcct acgcggtggc
     9061 gctgcgacgc cttcaggtcg tctacgggca gcggggcatc ttcccctgat ccggaccctg
     9121 cttatcggat caggcccgtt cgtcgacgcc ctcgtcgagg gacttgacgc ccgcggccac
     9181 gccaccgcca cggtcgagcc ggaccgggat cggtcggtct ctgctgggga gtccccgaaa
     9241 ctcgacgccg tcgaaccagg ccttcgggca gccgtcggcc tgctgggcgt tcccgaactg
     9301 gtggtccatg tcccggcggt caccgacggc ccggtggcca tcaacgacca gaagccggat
     9361 gcttgggccg cggcgtgtga ggccccgatg atggaggcca ttggcgtggc ccgggccgtc
     9421 ggcagccttg tcgatctggg cgaccctggg cctcaaagcg ggcctctccg actggtgtgg
     9481 atactcccca cgacggcgct gggtggaagc gccggattcg taggcgtcag cgctgccggc
     9541 gagggcatcc gggcactggc caagggggcg gccaggcagt ggggatcatc gtgcaccact
     9601 gccgtgctgg ccgtctcacc aacgcttctg ttcgacgggt cgggaccacc cgacgaggga
     9661 tcattgtccc ctccggcact cggaggaccg ggtgacgtgg ccaccgacgt ggcctctctg
     9721 gtcgacctgc tggccgaccc caggagccga ttcgccaccg gcgggacact ggtggccgac
     9781 ggcggttctt ggatggcccc gtgaacgcgt cgaccggacc atcgggcgcc gggctgctgg
     9841 acggacgggt ggctctggtc accggcggcg gcgccggtat aggactgggc ctggccaccg
     9901 ccatggcccg ccacggcgca tcggtggtcc tggccagtcg acgatccgag acgggcgaag
     9961 ccgccgctgt cgagcttcgg gctgagggcc tgcaagcttc ctgggtccgg tgtgacgtga
    10021 cggtgcccgc cgagatctcc gctgcagtgc tctccacagc ggagaacctg ggtcggctgg
    10081 actgcctcat ccacaacgcg ctggatggcg cggccggcgg tccgttggag gaagccaccg
    10141 acgagggttg ggccacactg gctgccacgt cggtccgggc gtcctacgac tgtgcccgca
    10201 ttgcccatcc ccacctgaag gcgaccggcg ggtcgctcgt cctactgacc tcggcagccg
    10261 gcatggaggg gagcgaagcc cgcccgctct acgccatggc caaggccgcc caacggggat
    10321 tcgccaaggg actggccgct gaatggggcc cggacgggat ccgggtcaac tgcatcgcgc
    10381 cggtggccat gacccctgcg ctggccggcg ccatccgcca cgacccgtca ctgggcgaac
    10441 ggttggtgga ccggacgccg ctgggccgaa tcggcgaccc agtcgacgac gtgggtccgg
    10501 tggcagtgtt cctggccggg gatctgtccc gccacgtgac cggccagacg gtggtcgttg
    10561 acggcggagg gttccggggc ctgtagtcgc gggctcgtgg cccgggaaac cggtccttcg
    10621 ggaaacgagt cagccgacct cggccagtgc cgcggcggct cgacgggcgg ccacctgccg
    10681 gcgaccgatg atcggtgtgg taggagcaaa gccggccgtg gcccgttcgg cctccgactc
    10741 gccaccccag aatccgagct cgcgattctc gcgggcatgc tgcttgcagg attccatgac
    10801 cgggcaggca gcgcagagtt gcgctgctcg ggcctcgcgc cggacccggg cctcgggacg
    10861 ttcggcgaag ggggcgaaga acagatcact cttgtcccgg cagaggacgt cgtccaccca
    10921 ccgcatctcc tgtgagtcga cgtacaggtt cgccgctgca tctgacatgg tgtgctccct
    10981 tcggaaccca tctgaggccc gggttccgga gatggggctg gttacccctc ccgctcaccc
    11041 gttcgcctct ccggcgtccc gcgatccgac tgctcgttgt atgacgcgcc cttcaccagg
    11101 ccgctttgcg atggtaggaa caggcggcgc cgcgctccag tgtttcgcga tgattgttag
    11161 agaacctacc tatctatcaa agtgatagaa atctcgcctt tggatacctc cccacgatga
    11221 ccaccgggta gtaactacga gagttactca ccggtagcag cccgtggaac ggcccatgga
    11281 tcaacaatga acgaatcgcc ggtctcccca tgagacccgt cgggctggca gagtgcacag
    11341 gtgcaggatc agacacccaa acaccaggac ggcccgtact tcgaagagtt gtccgtggat
    11401 caggtcttcg atcccgcacc agcagtcacc atcggctccg gcgaggccgc cgcctatcag
    11461 gccatctgcg gcgacccgtt ggccacctcg ctgagccggc cgctggccga ggccgtcacc
    11521 ggtcgaccgg gagccctcgt caatccggcc ctggtgctcc acgtgtcgat cggacagagc
    11581 accgtggcca cccgaacggt catcgccaac ctcttctatc gcggagtggc cctccgtcga
    11641 acggtccgcc tcggtgagac gctgcagagc aacgtcacca tccgcggcct gcgggaactg
    11701 tcgcgccgag acgaccggcc ggcacgcggg ctggtcctgc tcggcatccg gaccacctgt
    11761 ctcgacgacg gtgccacggt cgctgactac gagcgctgcg ccatgctccg gttccgcgac
    11821 cccgaggccg tcacggctca cgatgacgac ctcggcggag ccgaccccga catcgacctg
    11881 gctgcctgga acgacctgat cccggatggc tgggacaccg ccccgttgcg cgccgctgcg
    11941 gcgaccacgt cgacctggac ccgcggcaca ccggtcatgg atcccatgcg ggacacggtg
    12001 accagcgccc cggagctggc acggctcacc cagaacctcg ctccggttca ccgcgacccg
    12061 tcgctcggcc caggaggacg acgactggtc tacggcggcc acaccatcgg cctggcccag
    12121 gcatccctta ccagactgct ccccgacacg gccaccgtcc tgggctggca gtcatgtgac
    12181 cacccggcac cggtattcga gggcgatgtg ctctcattcc gacacacgct gctcgacgag
    12241 caacctgctg ccggcggacg cctgcgggca ctgcagaccg tggttgacgc acagcggtcc
    12301 aacggatcgt ctgagtccgt actggactgg cgcctcgtca cctggggcgc ctagccgagg
    12361 gccacggccc cccggtccac cagggcgccc agcgcaccgg ccgagaggcc caactcgccg
    12421 gtcaggatct cttcggtgtg ctggccgagc cgtggcgcca ccatggcacc acgatccacg
    12481 gcgtccgctc ccccgaatgc cagtggcgac ccgggcacga ggtgacgccc caccccgggc
    12541 tggtccagtt cggcaaacag cgggttgtcc gtagaggcac gcggatcctc ggccaccatc
    12601 tggaccaccg agcgatacgg accccagcac acctcgtgtt cgtcgagtgc ggtcgccacc
    12661 tcagtcaacg tccgttcggc gaaccagggc tcgaacaggg cacacaaccg gtccatggcg
    12721 agatagcgct cgccctcgtc accgaggtcg acctccaact cgtcggccag cgccgccacc
    12781 acatcagccg tcccggtggc agcctgaaga cccgaccatt gcttggctgt gattgccacc
    12841 accatggccc gccgaccgtc actggtcaca aagtcacggc cgaaggcccc atagatggcg
    12901 ttgcccaccc ggtcgcgttc ggtgccgttg acttgagcct cggccaggtt gccgagagca
    12961 cccaccgtgg ctagggctac gtcggccagg gcaatggtca ccaggcctcc accaccaccc
    13021 aatcgtcgac gccggtcagc ggccagcagg ccggtggctg ccatctgccc gcacaccaga
    13081 tcccatgccg ggaccacgtt gttgaccggg cgggggtcgt cggggtgtcc ggtgaggctc
    13141 ggatagccca ccgcgcagtt gaccgtgtag tccagcgccg tggtgccgtc gtggcttccg
    13201 gtgaccacca ccatcaccag gtcgtcgtgg cccagttcgc gactcctggt cgtcaggcgc
    13261 tcgggatcca tccagccccg agcagggaag ttggtcagga agtttcccgc gccggcgatc
    13321 agctcggtga gtagttccgt gacctcgccg tcccggaggt caacggccag cgaccgcttc
    13381 cccttgttca gaccgttcca gtagaggctg acgccgtcag cggtaagcgg ccagcgtcgg
    13441 tggtcgatgc cgcctcccac ctgatcaaac cgaatcacgt cggcccccag ctgggccaac
    13501 gtcataccac ctgacggcgc cgccacgaag gccgtgccct ccaccaccga cagcccagcc
    13561 agtggagcgg tcaccatctc ctcagccggg ccaggagact tcaggacagg gttcgaacgt
    13621 cgtccaagac catgccggcg tgggcctcca ggtcctggcc tttgaggtcg tagacacgca
    13681 tgatcgttcc ctcagggtcg attagatacg taacccgcag cggtaagccg tgttcggcct
    13741 ccactccata ggcctgccca acctccttag tggtgtcggc cagcaggcgg tatggaaacc
    13801 cctggtcgtc ggcgaagtgc ttctgcgcct cgacggtgtc gaagctggca cccagcacca
    13861 cgacaccggc ctcctcaaac tccggggttc ggtcacggaa ccccccgccc tggaccgttc
    13921 aaccgggggt ggacgccatt gggtaccacc acagggccac ccagtggccg cggaggctgt
    13981 ctagcgttac caactcaccg tcttggtcgg gcgccgagaa atctggcgcc ttcgttccaa
    14041 cgtcaagcat gtgtactcag ccggtcgtcc acgcagacga gtatggccgc tcaacagcgc
    14101 ccagtacgac accagtcgtc gccggttgcc gaccccagat caagcgacca gccacccacc
    14161 aagccaccgg gatcacgcca accaggagat cgactgcacc tcgctgtagg cctcgagtcc
    14221 ggcgatgccg cggtcacggc cgatgccgga gcgtttgaag ccaccgaacg gggcatcggg
    14281 atgcgggacc acgctgttca gcgccacgtt gccggtctgg atttgctggg cgatttgcag
    14341 agcccgggcg ttgtcgccgc tgtagacgta gctgtagagc ccgtagtccg agtcgttggc
    14401 caggctcacc gcctcgtcgt cgccgtcgtg ggccaggacg accaccaccg gaccgaaggc
    14461 ctcctcgcgc acggcgtgca tgtcggccgt gcaatcagcc aacaacgtgg gcgccacgaa
    14521 gtagcccggc aggtccggcc gctcaccacc acacaccagg gtggccccgg cgtcgacgcc
    14581 accccggatg aaggactcga cactgtcgcg ctgtgcctca ctgaccagcg ggccgaccag
    14641 ggtgtcacgc tcggtggcgt cgcccacctt cagcatcccg gccaccgcac ccagcgtgga
    14701 caccagttcg tcgaccttgc tgcggtggca gatcacccgg gtgggcgcag tgcatatctg
    14761 gccgctgtga aagccccaca cgctggcgat ggcgcccacg gccttgctca cgtccacgtc
    14821 atcggtcatc accaaggcgc ccttgccacc caactccatg aggacgcggg tcatggacga
    14881 agcaccgtcg gccatgatcc gcgcacccac cgccgacgaa ccggtaaagc tcaccatctg
    14941 cacgtcgggc gaggaaacga gggcggccgg cgcctcggtc cccgacgagg tcaggacgtt
    15001 gaccactccc ggaggtaggc ccgcctcgac tacggcctcg ccgagacgca ggacagccag
    15061 aggatcctgg ggagcgggct tgatgatgca ggtgttgccc atggctagag cgggggccaa
    15121 cttgccggcc acgtttacca acggaaagtt gtacgaggtg atgcaggcca ccacgccgac
    15181 cggccggcgg tacaccgcgg caccaaccag ccccgccggt ccgagggccg aagccgcctg
    15241 ggtgacgggc agctcggcac ggtcgagg
//
LOCUS       DASCMR010000057         1818 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000277966, whole genome shotgun sequence.
ACCESSION   DASCMR010000057 DASCMR010000000
VERSION     DASCMR010000057.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1818)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1818)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1818
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000277966"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(76..>1818)
                     /locus_tag="QGG16_01475"
     CDS             complement(76..>1818)
                     /locus_tag="QGG16_01475"
                     /inference="COORDINATES: protein motif:HMM:NF012706.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJP23977.1"
                     /translation="RAGVREHLNSVTDYSGIIGLITCDAFGDCGSQKITVIGHADSGD
                     IAASNANVVYEYAPGGSSLGEGNLVVPAPKPQRGGTLRYAIEADVDGLNPTSSAISTA
                     GYVMGAAVFDTLATGSVDGDCIPGLAESFEHNEDYTSWTYKLREGILFHDGNEVTAED
                     VVYSAEVQRNDPLVGLAVMPFYPTEGAFEALDRYTVRFNLLDSWANFCPTSQLAWVAS
                     KAWLVAALEDPTLDQQPVGSGPFRFDSRTEDSVTRFVRNEGYWGGEVWLDAVEYIPVP
                     DPDTRTDLLLAGEVHALHTTNDENIEILENSDGVYSLRSQKPHGGGESFIMLNSSVAP
                     FDDIRARKALAYATPKQDYLTLITAGLGVSADQLFEPGSPYHNPAVKQEADMPDEAVA
                     MAAEYCADLPENCSNGKINMEYMFVEGSVVNQRSAELMEKGWSVAFNVDFDLNNQQQH
                     IQNAALGWYNAVAWRQFGSYRPEGDNVWLMCRTVGFISLNWPKYCDEERDSLLWEATG
                     TTDEAIRTPLFQELAQKLHDDYLYIFLTHVQWTNSYADNVHGVCEADTPEGHRIFCPS
                     DGVAGVRTLWLSEG"
BASE COUNT          344 a          552 c          549 g          373 t
ORIGIN      
        1 gagaagaccc cagaatctca tctcggtggc agagctctaa tttgaagtct ggggaccgcc
       61 cctctgcaat ccgggttagc cctccgacag ccagagggta cgaaccccag cgaccccgtc
      121 actaggacag aagatccggt gtccctcagg tgtgtctgcc tcgcaaaccc cgtgcacgtt
      181 gtcggcatag gagttagtcc actggacgtg cgtgaggaaa atgtacaggt agtcgtcgtg
      241 gagcttctgc gccagttcct ggaacaacgg cgtgcggatg gcttcatcgg tcgtccccgt
      301 ggcctcccac aacagcgaat cgcgctcttc gtcgcagtac ttcggccagt tcagggagat
      361 gaatcccacc gtgcggcaca tcagccagac gttgtcgccc tcgggccggt acgaaccgaa
      421 ctggcgccag gccaccgcgt tataccaccc cagtgccgcg ttctgaatgt gctgctgctg
      481 gttgttcagg tcgaagtcca cgttgaacgc gacactccaa cccttctcca tcaactctgc
      541 cgaccgctgg tttacaacag agccttcgac aaacatgtac tccatgttga tctttccgtt
      601 gctgcagttt tctggcaggt ctgcgcagta ttcggcagcc atagcaacag cctcatcggg
      661 catgtcggct tcctgcttga cggccgggtt gtgatacggg ctacccggtt cgaacagttg
      721 atctgcagac acccccagac cagcggtaat cagcgtcaaa tagtcctgct tcggtgtggc
      781 gtaggccaga gcctttcggg cccggatgtc gtcaaacggg gcaaccgatg agttcaacat
      841 gatgaagctc tcgcctccgc catgcggctt ctgactgcgg aggctgtaaa ccccgtctga
      901 gttctcgagg atctcgatgt tctcgtcatt ggtcgtatgt agggcgtgga cttctcctgc
      961 cagcaacagg tcggtccggg tatccggatc ggggacgggt atgtactcga cggcgtcgag
     1021 ccatacttcg cctccccagt agccctcatt gcggacgaac cgcgtcaccg aatcctcggt
     1081 ccggctgtcg aaccggaacg ggccggagcc aaccggctgc tgatccaggg tcgggtcctc
     1141 cagggcggcc acgagccatg cttttgaggc cacccaggcg agttggctgg tcgggcagaa
     1201 gttcgcccat gagtcaagga ggttgaaccg gaccgtgtac cggtctaggg cctcgaaagc
     1261 cccctcggtc gggtagaacg gcatgacggc cagtccgacc aacggatcgt ttcgttggac
     1321 ctcagcgctg tagacgacgt cctctgctgt cacctcgttg ccgtcgtgga acaggattcc
     1381 ttcacgaagc ttgtaggtcc atgaggtgta gtcctcattg tgttcgaacg actcagcaag
     1441 acccggaatg cagtctccgt ctacagaacc ggttgcgagg gtgtcaaaga cggcagctcc
     1501 catcacgtac ccggcagtcg agatcgccga cgaggttggg ttgagaccgt cgacatcagc
     1561 ttcgatggcg tagcggaggg tccctcccct ctgcggcttg ggtgccggta cgacgaggtt
     1621 gccttcgccg agcgacgagc cgccgggggc gtactcgtag acgacgttgg cgttggacgc
     1681 agcaatgtca ccggagtcgg cgtggccgat cacggtgatc ttctgggaac cacagtcgcc
     1741 aaaggcgtca caggtgatca ggccaatgat gcccgagtag tcggtaaccg agttgaggtg
     1801 ctcgcgcacg cccgcccg
//
LOCUS       DASCMR010000058         1628 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000298367, whole genome shotgun sequence.
ACCESSION   DASCMR010000058 DASCMR010000000
VERSION     DASCMR010000058.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1628)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1628)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1628
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000298367"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..847
                     /locus_tag="QGG16_01480"
     CDS             <1..847
                     /locus_tag="QGG16_01480"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HJP23978.1"
                     /translation="QRSCGAEVALLSPGELADRFGYMHIDDLAGASLGLRNEGTLDAY
                     SLMRGFQQRARHNGVEYATDRVTGLRTTPARDRVTHVEMASGAVVACDRVVNCTGPRA
                     RWMADLVDLPLPVEPRIRGAWVFDCRTPLDGPTLPLTIDTTGMHVRTEPPHYLAGMPP
                     VDDIAVDPEDFAVREAEWEDHIWPALVHRIPAFERIGVTHRWVGHYAYNTLDHNAVVG
                     PAGAVPNFYFCNGFSGHGLQQSAGVGRALNELITYNEYRTIDLSQMGHDRIVAGKPFL
                     EKAII"
     gene            complement(1163..>1628)
                     /locus_tag="QGG16_01485"
     CDS             complement(1163..>1628)
                     /locus_tag="QGG16_01485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23979.1"
                     /translation="PMIRVLADGLDLKLDSITTDTDRRALERTVHVDGMGEFEAGTQG
                     AFRFEVNGVIGGRPVLVAEHVTRIDDSCAPDWPQSSIDGGLHRVVITGKPNLTVSVHG
                     EDAADPGAAAGGNTLAANRIVNAIPAVCEGEPGPIHPLALPSIVGSSQLRLS"
BASE COUNT          323 a          532 c          480 g          293 t
ORIGIN      
        1 acaacgttca tgcggagccg aagtggccct gctgtcaccc ggggagttgg ccgaccggtt
       61 tgggtacatg cacatcgacg atctggccgg tgccagcctc ggcctccgca acgagggcac
      121 gctagacgcc tactcgttga tgcggggctt ccagcagcga gcccgacaca atggcgtgga
      181 gtacgccacc gaccgggtca ctggactacg taccaccccg gcccgcgacc gggtaaccca
      241 cgtggagatg gcctcgggag ccgtggtggc ctgcgaccgc gtggtcaact gcaccggtcc
      301 gagggcccgt tggatggccg acctggtcga ccttccgcta cccgtcgagc cccggatccg
      361 gggtgcctgg gtgttcgact gccgaacccc actggacggc ccgaccctgc cgctgaccat
      421 cgacaccacc gggatgcacg tacggaccga accaccccac tacctggccg gtatgccacc
      481 agtcgacgac atcgcggtgg atccggagga cttcgccgtc cgcgaggctg aatgggagga
      541 ccatatctgg ccggccctgg tgcaccggat cccggccttt gagcgcattg gggtgaccca
      601 ccggtgggtc gggcactacg cctacaacac gctggaccac aacgccgtgg tcggtccggc
      661 cggcgcggtt cccaacttct acttctgcaa cgggttcagc ggccacggcc ttcagcagag
      721 cgccggggtg ggccgggcac tcaacgaact catcacctac aacgagtacc gcaccatcga
      781 cctgtcgcag atgggccacg accgcatcgt ggccggaaag ccctttcttg aaaaagccat
      841 catctaagcc cgactgcagt cggactagac cacccgatgc aaccttgctg aggtcaaggg
      901 cactgggaaa gcccatcttg tcttcaatct cgtggaatac gaacgagatc gcgtgctcaa
      961 cgatccccta ctagttggag ccacagcaat agacgtactc gatgacgatc acttcagaat
     1021 ccagttgctc cgccgcgacc agacgactga atcagaagcc gtgcgacgca gtatcgagaa
     1081 ctcttttgcc aacttggcta catcaaccaa gccagccgac atcgacgggt cgctgtcttg
     1141 ggccgtcagt caaaccgacc ggtcaagaca ggcgaagttg gctggagccg acgattgacg
     1201 gaagagcaag gggatggatc ggccccggct ccccttcgca tactgccggg atcgcgttga
     1261 cgattcggtt ggcagccaga gtgttacctc cggctgctgc acccggatct gctgcatctt
     1321 caccatggac cgagacggtc agattcggct taccagtgat cacgacgcgg tgaagtccac
     1381 catcgatact ggactgaggc cagtcaggtg cacaactgtc gtcgatcctg gttacgtgct
     1441 ctgctactag aaccggccgt ccgcctatga ctccgttcac ctcgaagcga aaagcgccct
     1501 gtgtcccagc ttcgaactca cccattccgt ccacgtgcac ggttcgttcg agagctcgac
     1561 ggtcggtgtc agtggttatc gagtccagtt tgaggtctag gccatcggcc aatacccgga
     1621 tcattggg
//
LOCUS       DASCMR010000059         4060 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000301385, whole genome shotgun sequence.
ACCESSION   DASCMR010000059 DASCMR010000000
VERSION     DASCMR010000059.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4060)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4060)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4060
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000301385"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(379..455)
                     /locus_tag="QGG16_01490"
     tRNA            complement(379..455)
                     /locus_tag="QGG16_01490"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(419..421),aa:Ala,seq:cgc)
     gene            complement(481..1014)
                     /locus_tag="QGG16_01495"
     CDS             complement(481..1014)
                     /locus_tag="QGG16_01495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23980.1"
                     /translation="MLILLGLGVLWAAVLLPPVIRNRDVLTRPLAAVASVGRSASRVT
                     VGSAARSTGRPRVSASLSGVRSRRLRAFRSAATSVPDDVGSARRRRRDLLLTLGGVAV
                     FTFLGGVAVGGAVWMVHFLVDLLLVGYAMLVTQRHQLEAERRETVIPFRMDGPLMGGL
                     TGTSAMRDEAVLSRRAN"
     gene            complement(1167..1667)
                     /gene="moaC"
                     /locus_tag="QGG16_01500"
     CDS             complement(1167..1667)
                     /gene="moaC"
                     /locus_tag="QGG16_01500"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015799245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HJP23981.1"
                     /translation="MPEPAGTDGFTHLDDEGRARMVDVGGKDATRRRAVARARITMQA
                     ETAEALRLGRVSKGDVLAVARVAGIQAAKRTSELIPLCHPLMLSSVVVDLVVGHAWVD
                     VEATTETVDRTGVEMEALTACSVAALAIYDMCKAVDRSMSVESLGLHEKSGGRSGDWR
                     RDDHPA"
     gene            complement(1672..2655)
                     /gene="moaA"
                     /locus_tag="QGG16_01505"
     CDS             complement(1672..2655)
                     /gene="moaA"
                     /locus_tag="QGG16_01505"
                     /EC_number="4.1.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015799244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HJP23982.1"
                     /translation="MVLPLIDGFGRVHRDLRISVTDRCNFRCGYCMPAEGLQWLPRAE
                     LLTFEEIERVARLLVERHGIDSIRLTGGEPTVRADLRRLVAMLSALGADLALTTNGST
                     LELAASGLADAGLKRINVSLDSLRADRFAELTLRDELGRVLNGIDAALAAGLDPVKVN
                     VVVMRGVNDDELVDFARFGRDRGVMVRFIEFMPLDADEAWTHESVVGIDEIVARVGEV
                     FPLEPIDRTSAPASRFRYLDGGGEIGVVASVTRSFCDSCDRIRLTADGQFRNCLFAVN
                     EFDVRSLLRSEATDDEVSALLERAVAAKWAGHGIGRVEFIRPARSMSQIGG"
     gene            complement(2716..3924)
                     /gene="glp"
                     /locus_tag="QGG16_01510"
     CDS             complement(2716..3924)
                     /gene="glp"
                     /locus_tag="QGG16_01510"
                     /inference="COORDINATES: protein motif:HMM:NF045515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990586 - divisome complex [Evidence
                     IEA];
                     GO_function: GO:0061599 - molybdopterin molybdotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gephyrin-like molybdotransferase Glp"
                     /protein_id="HJP23983.1"
                     /translation="MISLAEAREHVLGRCERPDPVEVALSDARGLVLAEPVDSPECVP
                     PFANTAMDGFAVRAADTVGAPVVLEVVGTVAAGVDPVVAGIEVGSGTAARIMTGAPMP
                     PGADAVVMVERTEMGADGATVSVAIEVPVGNHVRSAGEDLVAGDRVFEAGAVLSPGHL
                     GVLASIGALSVVVHRQLRVGVLSTGDELRDGPGALAPGQIRDANRPSLLGLLDELGVD
                     AVDLGRVVDDEGAIEAALLDGASRCDAVLTSGGVSMGDFDYVKVVLDRIGDMRWMQVA
                     IKPAKPLAFGRIGGVPVFGLPGNPVSSMVSFELFARPALRAMSGHTGTDRTCIRADVV
                     GGLPRHADGKVHFARVGVEVVDGRFRVRSAGGQGSHQLTAMAAADGLAVLPDGDGIPD
                     GGEVDVLLLG"
BASE COUNT          765 a         1454 c         1267 g          574 t
ORIGIN      
        1 cgggatctcc acccgcttcg tctccaacga agcctgcaac cggccgtata gacaccgaac
       61 gatgggcgta ggcggtacaa gggctttagg ccggggcacc agacgcgccg agggggtggg
      121 cagggtacag atccctagcg gcgaaggtct ggcacgcccc gtcgacttcg ttgaaataga
      181 gggcgtttag gggtttttca ggggtctgca gcagggtgca gttttgggta cggattcagc
      241 cccaaaacgg gccaaatcgg ccactccagg ggtagacgca gctcaaacgc tccgaggcac
      301 ctggccccat acgacaacag gcctcaccgt tgagtatccg ggacggatga ccccggatac
      361 ctcgactctt atcggtcatg gtggaggtga tgagaatcga actcacgacc tctacgttgc
      421 gaacgtagcg ctctagccaa ctgagctaca cccccgcgac cgggggcgat ggtatcggga
      481 tcagttggcc cggcggctca gcacggcctc gtcgcgcatg gccgacgtgc cggtcagccc
      541 acccatgagc gggccgtcca tccggaaggg gatgaccgtc tcgcgtcgct cggcttccaa
      601 ctggtggcgt tgggtgacca gcatggcgta gccgacgagc agcaggtcga cgaggaagtg
      661 gaccatccag accgctccgc ctacggccac gccacccagg aacgtaaaga cggcgacacc
      721 tccgagggtc aggagcaggt cgcggcggcg gcggcgggcc gaaccgacgt catcgggaac
      781 cgaggtggcg gccgaacgga atgcccgcag acggcgcgac ctgacgccgg acagcgaggc
      841 gcttaccctc ggccgacccg ttgatcgggc ggctgatccg acagttaccc ggctggctga
      901 tcgaccgacc gaggccacgg ccgccaacgg gcgggtcagg acgtcacgat tgcggatgac
      961 gggcggcaac aggaccgcag cccagagaac cccgagtccc agaaggatca gcattgacga
     1021 tgcctcattt ggatccaccc ttcggtccgc tcgtacccct gtggataacg agggaaggta
     1081 gtagggcttc cctactaaat ggtggatgtc tacgcgctca gcgcgcgaat gttcgcgcgc
     1141 agggcgcgat aaagcccccg gcggagtcac gcagggtggt cgtcccgtcg ccagtcgcca
     1201 gagcggcctc ccgatttctc gtgcaggccg agcgactcca cgctcatcga gcggtccacg
     1261 gccttgcaca tgtcatagat ggccagggca gccaccgaac aggcggtcaa cgcctccatc
     1321 tcaacgccgg tccggtccac ggtctcagtc gtcgcttcga cgtccaccca agcatgcccg
     1381 accaccaggt ccacgaccac tgaactcaac atcaacggat ggcacagtgg gatgagttcc
     1441 gacgttcgct tggcggcctg aatcccggcc acccgggcca cggcgagcac atcgcccttg
     1501 gacaccctgc cgagcctcag ggcctcggcg gtctcggcct gcatggtgat cctggcccgg
     1561 gccacagccc gtcgccgggt cgcgtccttg cctcccacgt cgaccatgcg ggcccgaccc
     1621 tcgtcgtcga ggtgggtgaa gccgtctgtc cccgctggtt caggcaccgg atcagccgcc
     1681 gatctgggac atggaacggg ccggacggat gaactccacc cgaccgatcc cgtgaccggc
     1741 ccacttggcg gccactgcac gctccagcag ggcactgacc tcgtcgtcgg tggcctccga
     1801 ccgcagcagc gaccggacgt cgaactcgtt cacggcgaac agacagttgc ggaactgacc
     1861 atccgcggtg aggcggatcc ggtcgcacga atcgcagaag ctccgggtga cgctggccac
     1921 caccccgatc tcaccgccac cgtcgaggta gcggaaccgg ctggctgggg ccgaggtccg
     1981 gtcgatgggc tccagcggaa acacctctcc cacccgggcc acgatctcgt cgatgcccac
     2041 caccgattcg tgggtccagg cctcgtcagc gtccaacggc atgaactcga tgaaccggac
     2101 catcacaccc cggtcccgac cgaaacgggc aaagtcaacc agttcgtcgt cgttgacgcc
     2161 tcgcataacc accacgttga ccttcaccgg gtccagaccg gcggccaacg ccgcgtcgat
     2221 tccgttcagc acccgaccaa gttcgtcgcg cagggtcaac tcggcgaacc gatcggcccg
     2281 caacgagtcc aacgagacgt tgattcgctt taatcctgca tcggccagtc cggacgcagc
     2341 cagctccagg gtggagccgt tggtagtcag ggccaggtcc gccccgaggg cggacagcat
     2401 cgccaccaga cggcgcaggt cggcccgcac cgtcggttct ccaccggtga gacggatgct
     2461 gtcgatccca tggcgttcga ccagcagccg ggctacccgc tcaatctcct cgaaggtgag
     2521 tagttcagct cggggcaacc actggaggcc ttcggcgggc atgcagtagc cacaccggaa
     2581 gttgcaccgg tcggtcaccg agatgcggag gtcacggtgc acccggccga agccgtcgat
     2641 cagggggagg accactgggc cagcgtacgg ctcgccgtca cccaccgcgt ccggcggaca
     2701 ccgattcgac aacccttaac ccagcaacaa gacgtcgacc tcgccaccgt cgggtatccc
     2761 gtcaccgtcg ggcaacacgg ccaggccgtc tgcggccgcc atggccgtca gttggtggga
     2821 accctggccg cccgccgacc ggacccggaa ccgaccgtca accacctcga cgcccacccg
     2881 ggcgaagtgg accttgccgt cggcatgacg aggcaagccc ccgacgacgt ccgcccgaat
     2941 gcaggtccgg tcggtccctg tatggccgga catggcccgc agggccgggc gggcgaacaa
     3001 ctcgaaggaa accatcgacg acaccggatt gccgggaagc ccgaacaccg gcacgccacc
     3061 gatccgaccg aaggccaagg gcttggccgg cttgatggcc acctgcatcc aacgcatgtc
     3121 gccaatccgg tccagaacga ccttgacgta gtcgaagtcg cccatcgaca cgccgcctga
     3181 ggtcagcacg gcatcgcacc gggaggcccc gtcgagcaat gccgcctcga tggctccctc
     3241 gtcatcgacc acccggccca gatcgaccgc atcgacgccc agttcatcga gcaggccaag
     3301 gagagacggt cgatttgcgt cccggatctg gccgggagcc agcgccccgg gcccgtctcg
     3361 caactcgtcc ccggtggaca gcaccccaac ccgaagttga cggtgaacga ccaccgagag
     3421 ggcaccgatg ctggccagca ctccgaggtg ccccgggctc aggaccgctc cggcctcaaa
     3481 cacccggtcg ccggccacca agtcctcgcc ggcagaccgt acgtgattac ccaccggcac
     3541 ctcgatggcc accgagacgg tcgccccgtc cgcccccatc tcggtgcgtt cgaccatcac
     3601 cacggcatcg gcgcccggcg gcatcggcgc cccggtcatg atccgcgctg cggtgcccga
     3661 tccgacctcg atacctgcga ccaccggatc cacgcccgcg gccaccgtgc ccaccacttc
     3721 gaggaccacc ggcgccccca cggtgtcggc cgcccgcacg gcaaagccgt ccatcgccgt
     3781 gttggcgaac gggggaacgc actcgggcga gtcgacgggc tcggcgagca ccaggccccg
     3841 agcgtcggac aacgccacct caacagggtc cggcctctcg cagcgaccaa gcacgtgttc
     3901 acgggcctcg gctagggaga tcatcgaccc caaccctgct cctcgcctga catgaggcga
     3961 cgaatgttgg cccggtgtcg aaccagcact accagacaga tgccggttgc ccccagaaag
     4021 tctggccaac cacgactggt cgcagcgacg ccgacgggta
//
LOCUS       DASCMR010000060         2997 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000303058, whole genome shotgun sequence.
ACCESSION   DASCMR010000060 DASCMR010000000
VERSION     DASCMR010000060.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2997)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2997)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2997
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000303058"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..397)
                     /locus_tag="QGG16_01515"
     CDS             complement(<1..397)
                     /locus_tag="QGG16_01515"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF017864.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HJP23984.1"
                     /translation="MSPASHLPPLVVEVTRGDRLESRHEVDVAIVDADGRLVRAHGDA
                     HRDVMPRSACKPVQALPLVTTGAADAFSLGNVELALACASHDGEPGHVSAVRAWLGRL
                     GLDADALACGSHLPMHEGSAVDMVAAGDTP"
     gene            complement(408..701)
                     /locus_tag="QGG16_01520"
     CDS             complement(408..701)
                     /locus_tag="QGG16_01520"
                     /inference="COORDINATES: protein motif:HMM:NF040386.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6356 family protein"
                     /protein_id="HJP23985.1"
                     /translation="MVTHYDANSHNVNPRHPSTLFTAHPASVGETWSQHARFAFSAAG
                     RLVVAAMAAAVHALFPFLFQTTASRTIDVLHSRIHGPRGNESVVTTTTELLAE"
     gene            814..1275
                     /locus_tag="QGG16_01525"
     CDS             814..1275
                     /locus_tag="QGG16_01525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HJP23986.1"
                     /translation="MDIIDRDLLRLLQDDASLSTTELGERVGLSATSCWRRVQRLQDQ
                     GILRGRVALVDPAAVGRGLTALVEIRTTDHSADWLEQFTLGIAEFPEIVNAWRTSGEV
                     DYMLRVLVRDIAAYDDFYKRMTQRVGFSGFRSIFVMEELKSTTAVPLDDHA"
     gene            complement(1285..1758)
                     /locus_tag="QGG16_01530"
     CDS             complement(1285..1758)
                     /locus_tag="QGG16_01530"
                     /inference="COORDINATES: protein motif:HMM:NF015999.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaK/EbsC family protein"
                     /protein_id="HJP23987.1"
                     /translation="MSRRSDAIERFTVEAEASGLDIEVQLYPGGTRTAADAADAVGCH
                     VDQIVKSLVFMADVRPVLVLCSGGRRVDEERLASYLGTEIRIAGASEVRAATGFAIGG
                     TPPLGHTVPLRTLVDPHLMDFDEVWAAAGTPDSVFPVKPKDLVKATSGAVVGVTR"
     gene            2002..2256
                     /locus_tag="QGG16_01535"
     CDS             2002..2256
                     /locus_tag="QGG16_01535"
                     /inference="COORDINATES: protein motif:HMM:NF015893.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC/Spx/MgsR family protein"
                     /protein_id="HJP23988.1"
                     /translation="MDEPLDHDLLVRILDMVALGPAEMIRRGDGFDALNVNPASLDDP
                     TVVVDLISAHPELMQRPIGILGNRAVVARPADRILELLDT"
     gene            2307..>2997
                     /locus_tag="QGG16_01540"
     CDS             2307..>2997
                     /locus_tag="QGG16_01540"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJP23989.1"
                     /translation="MSRPLLAETVAEAARRFGDRAAFQLADGTELSYRELDRASDEVA
                     AGLAGRGLGPGNVLLLSLPSGLEYAVGYLAAAKAGVTTAGANPRLRARERSRIIEAVD
                     PDLILANDALSDGIPEDRRVELVGDGNDPTQLLAGLRGHGEVVPAVPADPYRPTCICF
                     TSGTTGDPRGAWFTDRQLVAIHALDAGGAWGSGGHMVSGTAFAHVGVMTKLGWQLASG
                     ATIHVMDRWTAS"
BASE COUNT          543 a         1017 c          936 g          501 t
ORIGIN      
        1 ccggtgtgtc accggccgcc accatgtcga cggcagagcc ctcgtgcatc ggaaggtggc
       61 ttccacacgc caaggcatcg gcgtccagac cgagtcgacc gagccaggcc ctgacagcgg
      121 agacatgacc cggctcaccg tcgtgactgg cgcacgccag ggccaactcg acattgccca
      181 gactgaaggc gtcggcggcg ccggtggtta ccagcggcaa cgcctggacg ggcttgcacg
      241 ctgaacgggg catcacgtca cgatgggcat cgccgtgggc gcggaccaat cggccgtctg
      301 catcgacgat ggccacgtca acctcgtgtc gactctcaag ccgatcaccc cgagtgacct
      361 cgacgaccag cggagggagg tgcgacgccg ggctcatggg aacaggatta ctcagccaga
      421 agctccgtgg tggtggtcac caccgactcg ttgccccgag ggccgtgaat ccgggagtgg
      481 agtacgtcga tggtccgact ggccgtcgtc tgaaaaagaa agggaaacag ggcgtgcacc
      541 gctgcggcca tggcagcaac aaccaatctt ccggctgccg aaaatgcaaa ccgagcgtgc
      601 tgcgaccacg tctcaccgac cgatgccgga tgcgccgtga acagcgtgga tggatgccgg
      661 gggttgacgt tgtgggagtt ggcgtcgtag tgcgtgacca cggcatgaac ctattggaga
      721 atccccggga tatccgtgcg ctattgcgat atctcagcct atttgtgcat tggttatcca
      781 gatataacct ctaatctgca atatacttgc acgatggata tcatcgatcg ggatctgctg
      841 cgtctcctcc aggacgatgc ctccctctcc accaccgaac tcggcgaacg ggtcggcctc
      901 tcggccacat cgtgttggcg gcgggtccaa cgccttcagg accagggcat ccttcgtggg
      961 cgggtggccc tcgtcgatcc agcggcggtc ggacgcggcc tcaccgccct cgtggagatc
     1021 cgcaccactg accactccgc cgattggttg gagcagttca ccctgggcat cgccgagttt
     1081 cccgaaatcg tgaacgcctg gcgaaccagt ggtgaagtgg actacatgct tcgggtactc
     1141 gtccgcgaca tcgccgccta cgacgacttt tacaagcgga tgacccagcg tgtcggtttc
     1201 tcgggcttcc gttcgatctt cgtcatggag gaactcaagt ccaccaccgc cgtcccactg
     1261 gacgaccacg cctgagatcg ccggtcagcg ggtgacgccg accaccgcac ccgaagtggc
     1321 cttgaccagg tccttgggct tcacggggaa caccgaatcg ggggtgccgg ccgccgccca
     1381 aacctcatcg aagtccatga gatgagggtc gaccaaggtc cgcaacggaa cggtgtgccc
     1441 cagcggcggc gtcccaccaa tagcgaatcc ggtggccgcc cggacctcgc tggccccggc
     1501 gatcctgatc tcagtaccca ggtaggacgc caggcgttcc tcatcgaccc ggcggccgcc
     1561 tgagcacaac acgagtaccg gccggacgtc ggccatgaac accaacgact tcacgatctg
     1621 atccacgtgg caacccacgg cgtcagccgc atcggccgcc gtccgggttc caccgggata
     1681 tagctgtacc tcgatgtcga gccccgaggc ctcggcttcg acggtgaagc gctcaatggc
     1741 gtcgcttcgt cggctcatgg gtcgaactcc cgggatcgaa ggggcggccg atgctcggtc
     1801 cgtccaggtt ctgtgcagcc cacatgatgc gtgggccacg cgacgattct aggggcgggc
     1861 gaagcgcgcg gtaccgtccg gcccatggct tccatcgatc cgcgtcggct cctactcgtc
     1921 cacaacccgg tctgagggaa gtcccggggc gccctcgaaa ttctcgagga gcgcggcgtc
     1981 gagttcgacg tcatcgagta catggacgag ccgctggatc acgacctgct ggtgcgaatc
     2041 ctggacatgg tcgctctggg ccctgcggag atgatccgcc ggggcgatgg gttcgatgcg
     2101 ttgaacgtca acccggcgtc gctggacgac ccgaccgtcg tggtcgacct gatctccgca
     2161 catcccgaac tcatgcagcg acccattgga atcctcggca accgggcagt agtcgcccga
     2221 ccagccgatc gcatcctcga actcctcgac acctgagatc tccaatcgac cggtgacccg
     2281 atgactgctc gcaggacgag aaccagatga gcaggcccct gctggctgaa acggtggccg
     2341 aggccgcccg ccggttcggc gaccgggcag cgttccagtt ggccgacggc accgaattgt
     2401 cctaccggga actcgaccgg gccagcgacg aggtggccgc cggactagcc ggccgaggat
     2461 tagggcccgg aaacgtcctc cttctctccc tgccttccgg cctcgagtac gcggtgggat
     2521 atctggcggc cgccaaggcc ggagtgacca ccgctggcgc caatccccgt ctccgggccc
     2581 gagaacgatc tcgcatcatc gaggccgtcg atcctgacct gatcctggcc aacgacgccc
     2641 tctccgacgg cattcccgaa gatcgtcgcg tcgaactggt cggtgacggt aacgatccaa
     2701 cccaactgct agccggcctc cggggccacg gcgaagtcgt cccggccgtc cccgcggacc
     2761 cttaccggcc gacctgcatc tgtttcacat ccggcaccac cggcgacccc cgcggcgcct
     2821 ggttcaccga ccggcaactg gtagccatcc acgcgctgga tgccggtggc gcatggggat
     2881 cgggcggtca catggtcagc ggcacggcgt tcgcccacgt cggcgtgatg accaaactcg
     2941 ggtggcagct ggcctcaggc gccaccatcc acgtcatgga ccgctggaca gccagcg
//
LOCUS       DASCMR010000061         3402 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000319056, whole genome shotgun sequence.
ACCESSION   DASCMR010000061 DASCMR010000000
VERSION     DASCMR010000061.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3402)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3402)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3402
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000319056"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(76..228)
                     /locus_tag="QGG16_01545"
     CDS             complement(76..228)
                     /locus_tag="QGG16_01545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23990.1"
                     /translation="MPSLPLLTAHQGGWDEIALVAGPLVLVAGILWLADRRARRMGGP
                     TEPDAD"
     gene            300..632
                     /locus_tag="QGG16_01550"
     CDS             300..632
                     /locus_tag="QGG16_01550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HJP23991.1"
                     /translation="MSIDVAPDTGIDGLRARVEKVIEVIRPAIQADEGDIVLHEVDEA
                     TGEVSVELVGACVTCPASDQTLKAGIERILKDRVDGVTSVQNVGATLAGDGPIGAPDP
                     DEGTPVSL"
     gene            632..1426
                     /locus_tag="QGG16_01555"
     CDS             632..1426
                     /locus_tag="QGG16_01555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HJP23992.1"
                     /translation="MATNEPRTEVLLRVEHRDDGVVVATLDRPKVNALDTALLRELEE
                     FARTCIDDPPGAVVITGAGRMFAAGAELAVFADPALRPGQADAFRDAFGAVERIPCPT
                     IAAVNGLALGGGAELAWCCDLRILGEGSAFGQPEVLLGIIPGGGATQRLTRLVGRATA
                     KRLIWGGAAVKAAEALALGLADEVVGDDEILDRACALAAGYAAGPRVAIRASKRAIDE
                     GADMTLADGVDLELELFLEVFETNDARVGVESFFEHGPGKADFTGS"
     gene            1501..2136
                     /locus_tag="QGG16_01560"
     CDS             1501..2136
                     /locus_tag="QGG16_01560"
                     /inference="COORDINATES: protein motif:HMM:NF028177.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047869 - dimethylpropiothetin
                     dethiomethylase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfonioproprionate lyase family
                     protein"
                     /protein_id="HJP23993.1"
                     /translation="MVAPFIEALSAFATSEGARDPDLTRPMALLTDALLRVMPTVGRG
                     PQPSQEVVDRHLGGALAAAVGTAGELIGSVVHEVGWAKPYPEYAGEPDMDAMRANYSY
                     APIIGSATDVISGGAVAAPYLSDEVFVGLVLQGPDCDYPSHVHKSEEIFWVAAGTSDW
                     QKGDVWRVEEPGGVIHHESGVRHATVTRDSPLLMLFAWVTDPGCIPVIVRR"
     gene            2373..3101
                     /locus_tag="QGG16_01565"
     CDS             2373..3101
                     /locus_tag="QGG16_01565"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: protein motif:HMM:NF013827.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HJP23994.1"
                     /translation="MRVGPVEGPPATLALVALNVAAFLGTVFLGGSGGGGVYDRFASG
                     GGMVTVDHGLLGIGRSGPFLIGVAEGEWSRLLTGGFLHAGLLHLLVNMFLLWMLGRQL
                     EAAHGPGRYAGLYLASLLAGSFGVMLRDPQALTVGASGAVFGLMAAAVIHQLRRGINP
                     WGTGLGGLLLVNVVFTFGRPGISIGGHLGGLVGGALVAWMVDTVERRGMPRVLVAALP
                     WVVAIAFAAGSVWAAGRWWDPVLR"
     gene            3128..>3402
                     /locus_tag="QGG16_01570"
     CDS             3128..>3402
                     /locus_tag="QGG16_01570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23995.1"
                     /translation="MDEQSLNQSAVGPPDLEFFWDPVCPFAWQTSRWLRRVADLRGLT
                     VEWRFINLSILNEERDYDTEFPEGYRESHDRGRRMLRVAASVRAAEGT"
BASE COUNT          479 a         1043 c         1266 g          614 t
ORIGIN      
        1 atttggcccg actaggggcc gacgtggccc tcgtaccggg ggttggcgga gcttgagtgg
       61 ccggatcagt cgcggttagt ccgcgtcggg ttcagtgggc ccacccatgc gacgggcccg
      121 acggtcggcc agccagagaa tgccggcgac cagcaccagc ggtccggcga ccagcgcgat
      181 ctcgtcccag cctccctgat gggcggtcag caatggcagc gaaggcatcg gccgatccta
      241 cggggacatc ttctggcacc cggggtggca ccgagggccg gtcctgcgag actgggacca
      301 tgtcgatcga cgtggccccc gatacgggca tcgacggact gcgggcccgg gtggagaagg
      361 tcatcgaggt gatccgtcca gccatccagg ccgacgaggg agacatcgtg ctccacgagg
      421 tcgacgaggc caccggcgag gtgtccgtcg agttggtggg ggcgtgcgtg acctgcccgg
      481 cgtcggatca gacgctcaag gcgggcatcg aacggatact gaaggaccgg gtggacggcg
      541 tgacgtcggt acagaacgtg ggtgccaccc tggctggcga cggacccatc ggcgccccgg
      601 atcctgacga gggcacgccg gtcagtctgt agtggcgacg aacgaacccc ggaccgaggt
      661 actgctccgc gttgaacacc gcgacgacgg tgtggtggtg gccacccttg accgccccaa
      721 ggtcaacgcg ctcgatacag cgctgctgcg tgagctcgag gagttcgctc gcacgtgcat
      781 cgacgatcca ccgggcgccg tggtcatcac cggtgctggt cggatgttcg cggccggtgc
      841 ggaactggct gtcttcgccg atcccgccct gcggcctggt caggccgacg ccttccgtga
      901 cgccttcggt gcggtggaac gcattccgtg tccgaccatc gccgcggtaa acggcttggc
      961 ccttggtggt ggagcggagc tggcctggtg ctgtgaccta cgaatcctcg gtgagggttc
     1021 ggctttcggt cagcctgagg ttctgctggg gatcatcccc ggcggaggtg caacccagcg
     1081 cctgacccgc ctcgtggggc gggcaacagc caaacgcctc atctggggcg gtgccgcggt
     1141 gaaggccgcc gaggcgctcg ctctcggtct ggccgacgag gtggtgggcg acgatgagat
     1201 cctggatcgg gcatgtgccc tggccgccgg ttatgcggcg ggaccccggg tggctatccg
     1261 ggcctccaag cgggccatcg atgagggcgc ggacatgacg ctggccgacg gggtcgatct
     1321 cgaactggaa ctgttcctgg aggtcttcga gaccaatgat gcgcgggtgg gcgtcgagtc
     1381 gttcttcgag cacggacctg ggaaggcaga cttcacgggt tcctgaggct tcgccggttt
     1441 ctgagatcac cgcgttcgat gtccgtcgcc ggaggtctgc cgggtgtacg ttgccgcgcc
     1501 atggtcgccc cgttcatcga agccttgtcc gcgttcgcca cctccgaggg ggcccgtgac
     1561 ccggatctga cccgacccat ggcgctcctg actgatgcgc ttcttcgggt gatgccgacg
     1621 gtaggtcggg gaccccagcc aagccaggag gtcgtcgatc gacacctggg tggtgctctg
     1681 gccgcggcgg tcggaacagc gggggaactc atcggctcag tcgtacacga ggtgggttgg
     1741 gccaagccat accccgagta cgccggtgag cccgacatgg atgccatgcg ggccaactac
     1801 tcgtacgccc cgatcatcgg gagcgccacc gacgtcatct ccgggggggc ggtggctgcg
     1861 ccgtacctga gcgatgaggt gtttgtcggg ctggtgttgc agggtccgga ttgcgactat
     1921 ccgtcgcacg tccacaagtc cgaggaaatc ttctgggtgg ccgcgggcac gtcggactgg
     1981 cagaagggcg acgtctggcg agtcgaggag cccggtgggg tgatccacca cgaatcgggg
     2041 gttcggcacg ccacggtgac ccgtgacagt ccgctactga tgttgttcgc gtgggtgacc
     2101 gacccgggtt gcattccggt cattgtccgg cgctgaacct gatgtcggaa tcattgccgg
     2161 gaggcgagtt cgaggcctgt caccggcatc cggagaatcg ggccggagtg cgctgtcagc
     2221 ggtgcaaccg ccggatctgt gcgctgtgca tgcacacggc atcggtgggc ttccactgtc
     2281 cggactgtgc aggcggacgg acgcgacggc gcgaaaggtc cagcccgatc cgtccggtgg
     2341 gggcgcgccc tgcggggcgg cgagtcgcac atgtgcgggt cggtccggtg gaggggccac
     2401 cggccaccct ggcgctggtt gccctaaacg tcgcggcgtt cctgggcacc gtctttctgg
     2461 gcggctcggg aggtggcggc gtctacgacc ggttcgcctc cggcggcggg atggtcaccg
     2521 tggaccacgg tctgctgggc atcggccggt cggggccgtt cctcatcggc gtggccgagg
     2581 gggagtggag tcgcctgctc accggtggtt tcctgcacgc cggcctgctc cacctcctgg
     2641 tcaacatgtt cctgctgtgg atgttgggtc gccagctgga ggccgcacac ggtccgggtc
     2701 gttatgccgg cctgtacctg gcgtcgttgc tagccggctc gttcggggtg atgctgcgcg
     2761 accctcaggc cctcacggta ggcgcatcgg gtgccgtgtt cggcctcatg gccgcggcag
     2821 tcatccacca gctccggcgg ggaatcaacc cctgggggac ggggctggga ggcctgctcc
     2881 tggtcaacgt ggtgttcaca ttcggccgac ccggcatcag catcggtggc catctgggtg
     2941 gattggtagg tggtgcgttg gtggcgtgga tggtcgacac cgtcgagcgt cgtggcatgc
     3001 cccgggtgct ggtcgccgcg ctgccctggg tggtggcgat cgcgttcgcc gccggttcgg
     3061 tgtgggcggc gggacgttgg tgggacccgg tgctgcgttg agatcgtctt cgggggacga
     3121 tcgcgtgatg gacgaacaat cattgaacca gtcggccgtt ggaccaccag atctggagtt
     3181 cttctgggac ccggtgtgtc cgttcgcctg gcagacgtca cgctggctac gacgggtagc
     3241 tgaccttcgg ggcctgaccg tggagtggcg gttcatcaac ctgtcgatcc tcaacgagga
     3301 gcgtgactac gacaccgagt tccccgaggg ctatcgggag tcacacgacc gggggcgccg
     3361 catgctgcgg gtggcggcct cggtgcgtgc cgccgagggg ac
//
LOCUS       DASCMR010000062         2615 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000320356, whole genome shotgun sequence.
ACCESSION   DASCMR010000062 DASCMR010000000
VERSION     DASCMR010000062.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2615)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2615)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2615
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000320356"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            43..201
                     /locus_tag="QGG16_01575"
     CDS             43..201
                     /locus_tag="QGG16_01575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP23996.1"
                     /translation="MTHVGYLIAGWGITLGTLAIYALRLIRRGRDLSAQVPDAHRRWL
                     EDQGSGDA"
     gene            194..763
                     /locus_tag="QGG16_01580"
     CDS             194..763
                     /locus_tag="QGG16_01580"
                     /inference="COORDINATES: protein motif:HMM:NF015085.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017003 - protein-heme linkage [Evidence
                     IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HJP23997.1"
                     /translation="MPDPGDKMGPEGDLIDDLTPVPTRPESGLVQRRPGAVVVLVVLV
                     AAVVAVLFQTLGDASLFFYEADRAVELRSELDGDRFRVVGTPQPGILEVEVDGESAVV
                     FTLCAGDVLADVVHLGDPAELFQPGVPVVLQGLWVRGPVPPGLVAPAADGWHLRTDHM
                     VVKHDNDYRGEGAELKACGLPDGNASASG"
     gene            760..>2615
                     /locus_tag="QGG16_01585"
     CDS             760..>2615
                     /locus_tag="QGG16_01585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis CcmF C-terminal
                     domain-containing protein"
                     /protein_id="HJP23998.1"
                     /translation="MNATLGTLFVALGLAASVAGIVTVAVGLATRTPSLVGRSRTWAV
                     LLAVAAVGQVAVMERALITRDFTVAFVAEHGSHRTPALFNVATLWSALEGSILLWVLI
                     LVGYLVLVVRRFRDRLDDPMVGWTLLVMFAVCAFFFLLLAGPAQPFGRFEPWAGYDGP
                     GPNPLLQNHVLMAFHPPVLYLGYVGFTVPFALAVAALATGRLGEGWLLEARRWTLTAW
                     GCLTLGIILGAWWSYEVLGWGGYWAWDPVENASFLPWLTGTAYLHSVMVQERRGMLRV
                     WNLSLLCATFALTILGTFITRSGVLESVHAFTESGIGPLLLGFFALVVATTVGLIAWR
                     GDALRAPGSIESPLSRTGAFLGNNLLFGAFAFVVLLGTVFPLLVEAAQGDRIAVGNPY
                     FERMTMPVGFALLFLMAVAPALPWGRGTVEVLSVRLRWPAMAGAAAMVLAVVLGGRGW
                     SPTLAVGLGGFAAGGAMRHLILAVRARGLRGLVGRSSGGMVVHIGVAVVAVAFACSSS
                     FVRQAEFRFNAVGDRATFAGHQLVFDGLSTVKLPEKTETRVAVMVDGERFEPAISVFP
                     FGGQTIGTPATRSTVRDDVQLAVLAVPDPDEGLGDASGDGSDNTVVRVTVQPL"
BASE COUNT          309 a          857 c          940 g          509 t
ORIGIN      
        1 gctccgtaag gcagtcggcg acccgtctcc cggggaatcg tcatgaccca tgtgggctac
       61 ctgattgccg gctggggcat caccttgggc acgctggcga tctacgcgct acgcctcatc
      121 cgacgcggac gggatctcag cgcacaggtg cccgacgccc accggcgttg gttggaggac
      181 caggggtccg gcgatgcctg atcccggcga caagatgggg ccagaaggcg acctgatcga
      241 cgacctgaca ccggtaccca cccgtcccga atcaggcttg gtccaacgac gacccggcgc
      301 ggtcgtggtg ctcgtggtgc tagtggcggc cgtggtggcc gtccttttcc agaccctggg
      361 tgacgcgtcg ctcttcttct acgaggcgga ccgggccgtg gagctgcgtt ccgaactcga
      421 cggcgaccgg ttccgggtgg ttggcacgcc ccagccagga atcctcgagg ttgaggtgga
      481 cggcgagtcg gcagtggtct tcaccctgtg tgccggtgac gtcctggccg acgtagtgca
      541 cctcggggac ccggccgagc tgttccaacc tggggttccg gtggtcctgc agggcttgtg
      601 ggttcgtggt ccggtgcctc ccggtctcgt tgcaccggcc gctgacggtt ggcacctccg
      661 gaccgaccac atggtggtca agcacgacaa cgactaccgg ggcgagggtg ccgagctcaa
      721 ggcttgtggc ctcccggacg gcaacgcctc ggcgagcggg tgaacgccac cctcggaacg
      781 ctctttgtag ccctcgggct ggctgcctcg gttgccggga tagtcaccgt ggccgtcgga
      841 ctggccaccc gcacgccgtc gctggtcggc cggtcacgga cctgggcagt gctgctggcc
      901 gtggcagccg tcggccaggt ggcggttatg gaacgggcgc tgattacacg ggacttcacc
      961 gtggccttcg tggccgagca cggtagccac cgcaccccgg cgctgttcaa cgtggccact
     1021 ctgtggtcgg ccctcgaagg ttcgattctc ttgtgggtcc tgatcctcgt ggggtacctg
     1081 gtgctagtgg tccgccggtt ccgggatcgc ctcgacgacc cgatggtcgg ctggaccctg
     1141 ttggtgatgt tcgccgtctg cgccttcttc ttccttttgc tggccggccc tgcccagccc
     1201 tttggccggt tcgaaccgtg ggccggctac gacgggccag gccccaaccc gctgctccag
     1261 aaccacgtac tgatggcctt ccatccgccg gtgctgtacc tcggctatgt cggattcacc
     1321 gtgccctttg ccctggcggt ggccgccctg gccaccggcc ggctgggcga ggggtggctg
     1381 ctcgaggccc ggcgttggac cttgacggct tggggatgcc taaccctggg gatcattctc
     1441 ggtgcctggt ggtcctatga ggtgctgggc tggggcggct actgggcgtg ggatccggtc
     1501 gagaacgcct cgttcctacc gtggttgacc ggcaccgcct acctccactc ggtcatggtc
     1561 caggaacgaa gggggatgct gcgggtttgg aacctgtcgc tgctgtgcgc cacgttcgcc
     1621 ctcaccatcc tgggtacgtt catcacccgg tccggcgtgc tggagtcggt ccacgccttc
     1681 accgagtcgg gcatcggccc gttgctgttg ggtttcttcg ccctcgtggt ggccaccacg
     1741 gtagggctca ttgcctggcg gggtgacgcc ctcagggcgc cggggtccat cgagtcgccg
     1801 ttgtcgcgca ccggggcgtt cttgggcaac aacctgctgt tcggggcttt cgccttcgtg
     1861 gtgttactgg gcaccgtgtt cccgctgctg gtcgaagcgg cccagggcga tcggatcgcc
     1921 gtgggcaacc cgtacttcga gcggatgacc atgccggtgg gcttcgccct gctgttcctc
     1981 atggccgtgg cgcccgccct gccgtggggc cggggaaccg tagaggtcct gtcggtccgg
     2041 ctgcgttggc cggcgatggc cggcgcggcg gccatggtcc tggcggtggt cctagggggc
     2101 cgcggttggt ccccgactct ggccgtgggc ctggggggct tcgctgccgg aggggcgatg
     2161 cggcacctga tactggccgt ccgggcccgc ggactgcgcg gcctggtggg acggtccagc
     2221 ggcgggatgg ttgtccacat cggggtggcc gtggtcgccg tggcctttgc ctgctcgtcg
     2281 tcgttcgtcc gccaggccga gttccggttc aacgcggtgg gtgaccgggc cacgttcgcc
     2341 ggccaccagt tggtcttcga cggcctgtcg accgtgaaac tgccggagaa gaccgagacc
     2401 cgggtcgccg tgatggtcga cggcgagcgg ttcgagccgg ccatcagcgt gttcccgttc
     2461 ggcgggcaga ccatcggcac gccagccacc cggtccacgg tccgcgatga cgtgcagttg
     2521 gcggtgctgg cggtacccga ccccgatgag gggctcggcg acgcgtccgg tgacgggtcc
     2581 gacaacacgg tggtccgggt gaccgtgcaa cctct
//
LOCUS       DASCMR010000063         2604 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000327927, whole genome shotgun sequence.
ACCESSION   DASCMR010000063 DASCMR010000000
VERSION     DASCMR010000063.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2604)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2604)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2604
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000327927"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            130..804
                     /locus_tag="QGG16_01590"
     CDS             130..804
                     /locus_tag="QGG16_01590"
                     /inference="COORDINATES: protein motif:HMM:NF024304.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HJP23999.1"
                     /translation="MSDRTTLQRKPERAVDDRDVIHAVLDEGLMAHVGLVVGDGDVAH
                     PVVIPMLYARDGDVLYLHGSPASRLLRTAKAGVEICVTVTLLDALVLARSGLHHSMNY
                     RSVVVMGTATEITNRETKVAALDRLVEHTIPGRSTQIRPAHDIEVKGTTVLVLPLDEC
                     SMKARATGPVDDLDDLDEPSWAGLIPIGVAVGEPEPDEGSSGDPVPGHVAFWSRGPGQ
                     VNGRAG"
     gene            807..2339
                     /gene="glpK"
                     /locus_tag="QGG16_01595"
     CDS             807..2339
                     /gene="glpK"
                     /locus_tag="QGG16_01595"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: protein motif:HMM:TIGR01311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004370 - glycerol kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HJP24000.1"
                     /translation="MPLGAASVSGGSLVGAVDQGTTSTRFMIFDETGSVVASAQRPHT
                     QHFPKPGWVEHDAAEILTNTWAVIDEALSSAGLLVGDLAAVGITNQRETLVAWDPATG
                     EPLNHAIVWQETRTNGIVNHLANGDLDRFRAVTGLPLATYFSGPKATWLLEHVDGLRA
                     RGETGQAVFGTIDSWLLWNLSGGPDGGRHATDVTNASRTLMMDLGTLAWDPDLVAAMG
                     VPMSMLPEIVPSIGHLGTGVGPLEGVPISSILGDQQAALFGQGCHSPGKAKNTYGTGC
                     FLLMHTGGDAVASTHGLLTTVASQIAGESPMFALEGSVAMAGATIQWLRDELGVIDDA
                     SEVEALARSVDDNGDVYLVPAFSGLFAPHWRSDARGAVVGLTRFSNRGHLARAALEAT
                     AFQTHELLAAMRADAIIGDRGVDLTELRVDGGMVGNDLLMQFQADLLDVDVVRPVVAE
                     TTALGAAYAAGLAVGVWSDLTDVQANWQEGDRWHPDMGSDERSRLTGRWGEAVRRTLD
                     WV"
     gene            2348..>2604
                     /locus_tag="QGG16_01600"
     CDS             2348..>2604
                     /locus_tag="QGG16_01600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24001.1"
                     /translation="MPENETSEHPPTGQSSTSYLGVANSEYEPPVPIEVPAVFAWPPR
                     PVAALAWLARLILYPWVVLYLVLSVVIWRWLLPSEATMASL"
BASE COUNT          418 a          898 c          844 g          444 t
ORIGIN      
        1 tgttccgggc tgagcaggca tcggcccgtg gtggcgagtt ggacgttgaa ctactcgacg
       61 accgtgtgca cctgaccggt cgtgccgtga ccgtggcccg tggaacactc ttttcgtgag
      121 ggaagcagca tgagcgaccg caccactctc caacggaagc cggaacgggc ggtcgacgac
      181 cgtgacgtca tccacgccgt actggacgag gggctcatgg cccacgtcgg cctcgttgtc
      241 ggcgatggag atgtcgccca tccggtggtc atccccatgc tgtacgcccg cgacggtgac
      301 gttctttacc tgcacggttc gccggccagc cgtctactgc gtacggccaa ggccggcgtc
      361 gagatctgcg tgacagtgac cctgctcgat gctctcgtat tggcccgctc tggtcttcac
      421 cactccatga actaccgctc agtagtcgtg atggggacgg cgacggagat caccaatcgt
      481 gagaccaagg tggccgctct cgaccgactc gtggagcaca ccatccccgg gcgaagcacc
      541 cagatcaggc cggcacacga cattgaggtg aaaggcacca cagtgctcgt cctgccgctg
      601 gacgagtgct ccatgaaggc ccgggccacc gggccggtcg acgaccttga cgaccttgac
      661 gagccgtcgt gggcggggct catcccgatc ggggtggccg tcggtgaacc ggagcccgac
      721 gaggggtcga gcggcgaccc ggtgcccggc cacgtggcct tctggtcccg tggtcccggt
      781 caggtcaacg gtcgggccgg ctgatcgtgc ccctcggcgc cgcctccgtc agcggtggtt
      841 ccctcgtcgg agctgtcgac cagggcacca ccagtacccg cttcatgatc ttcgacgaga
      901 cgggctcagt cgtggcgtca gcacagaggc cccacaccca gcactttccc aagcccggct
      961 gggtggagca cgacgctgcc gagattctga ccaatacatg ggcggtaatc gacgaggcat
     1021 tgtcatctgc cggtttgttg gtaggtgatc tggcggccgt cgggatcacc aaccagcgcg
     1081 aaaccctcgt ggcctgggac ccggccaccg gcgagccatt gaaccacgcc atcgtttggc
     1141 aggaaactcg gaccaatggc attgtcaacc acctggccaa cggcgatctg gaccgcttcc
     1201 gggctgtcac cggcctgcca ctggcgacct acttcagcgg ccccaaggcc acatggctcc
     1261 tcgagcacgt ggatggattg cgggcccgtg gcgagaccgg ccaggcggta ttcggcacca
     1321 tcgattcgtg gctgctctgg aacctgtccg gcggccccga cggtggacgt cacgccaccg
     1381 acgtcaccaa cgcgtcgcgc actctcatga tggacctagg cacacttgcc tgggacccag
     1441 atctcgtggc ggccatgggt gtgccgatgt cgatgcttcc cgagatcgtg ccgtccatcg
     1501 gtcacctggg caccggcgtc ggcccactag aaggcgttcc gatctcgagc attctcggag
     1561 accagcaggc cgccctgttc ggacagggct gtcattcacc cggcaaggcc aagaacacct
     1621 acggcaccgg ttgcttcctc ctgatgcaca ccggtggcga cgccgtggcg tccactcacg
     1681 gcctgctgac caccgtggcc tcccagatcg ccggcgagtc ccccatgttc gcgttggagg
     1741 gatcggtggc catggccggc gccacaatcc agtggctacg agacgaactg ggcgtcatcg
     1801 acgatgcgtc cgaggtggag gccctggccc ggagcgtcga cgacaacggc gacgtctacc
     1861 tcgtgcccgc cttctccggc ctgttcgccc cccactggcg gtcggacgca cggggagcgg
     1921 tggtaggcct cacccggttc tccaaccgcg ggcacctggc ccgcgctgcg ttggaggcca
     1981 ccgccttcca gacccatgaa ctcctggccg ccatgcgggc cgacgcgata atcggcgaca
     2041 ggggtgttga cctgaccgaa ctgcgggtcg acggggggat ggtcggcaac gacctgctga
     2101 tgcagttcca ggccgacttg ctggacgtcg acgtggtgcg ccctgtggtg gccgagacca
     2161 cggcgttggg cgccgcctac gcagcgggcc tcgccgtggg ggtgtggagc gacctgaccg
     2221 acgtccaggc caactggcag gaaggcgacc gctggcaccc cgacatgggt tccgacgagc
     2281 gttcccgcct caccggccgc tggggcgagg ccgtccgacg taccctcgac tgggtgtagc
     2341 gccgcccgtg cctgagaacg agacgtccga acacccgcca actggtcagt cctccacttc
     2401 ctacctcggc gtggccaaca gcgagtatga accgccggtt cccatcgagg tcccagccgt
     2461 cttcgcctgg ccgccacgac cggtggccgc cctagcctgg ttggcccgcc tgatcctcta
     2521 cccgtgggtg gtcctgtacc tcgtcctgtc ggtggtgatc tggcgctggc tactacccag
     2581 cgaggccaca atggccagcc tcca
//
LOCUS       DASCMR010000064         2373 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000331235, whole genome shotgun sequence.
ACCESSION   DASCMR010000064 DASCMR010000000
VERSION     DASCMR010000064.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2373)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2373)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2373
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000331235"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..603
                     /locus_tag="QGG16_01605"
     CDS             <1..603
                     /locus_tag="QGG16_01605"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJP24002.1"
                     /translation="IGSLQTIVLMVVASRRFGERIGAWLAGVALVAIVGVAVVMFGGG
                     GNAGLHLRGDLMALGAMVLFSAYFVLAKDVRARIDTFTLQTLTMSIGAVVLLPMAAFD
                     AGRILPGWPSGSQWAWLCLLLAVPGTGHLLMNWAHLHVSLSLAGMLTLAIPALSAFGA
                     WLALDQGLSLVQVVGMTVVVVSLVFVVRHDARLHVTSDET"
     gene            complement(667..1872)
                     /locus_tag="QGG16_01610"
     CDS             complement(667..1872)
                     /locus_tag="QGG16_01610"
                     /inference="COORDINATES: protein motif:HMM:NF012766.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HJP24003.1"
                     /translation="MANTASGSPSIDHEALIHFRRDRLRSQMVQRGVDACLLFDPVNV
                     RYATGARNMQVFHQRNPSRYLFLPVEGPVVLFEFAGAHHLATGLSTIDEIRPATTASY
                     VAAGPAISAVERRWADEVGTLLREVVGDGTTVGLERINHGASTALAGAGFRIVDAQEP
                     VERARAIKGPDELTCIRQSLRATERAVHAVRDAIRPGITENELWAELHRVVIAEGGDY
                     VETRLMTAGTNTNPWFQEAGDSPIPANALVALDTDVVGCHGYYSDFSRTFHVGPDAPT
                     AEQKRLYGLAHEQVHHNMGIIGPGVSFREYAERAWDIPDEFAAQRYYLSSHGVGMTGE
                     YPYLYHRHDFAASGYDGMIEPDMTICVESYIGAKGGSEGVKLEEHLLITETGIELLSD
                     FPFEPTLLG"
     gene            1971..>2373
                     /locus_tag="QGG16_01615"
     CDS             1971..>2373
                     /locus_tag="QGG16_01615"
                     /inference="COORDINATES: protein motif:HMM:NF015450.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24004.1"
                     /translation="MDVRDTIIDAVRAALGDLGVDPVPRVVQLERPANPDHGEWSTNV
                     ALASAKAVGRNPRELGAQLAERLKASPPNHVVGVEVAGPGFVNFHLADSWLHDVLADV
                     VTAGTDGWARVDEGDGTRVIVEFVSANPTGPL"
BASE COUNT          350 a          752 c          826 g          445 t
ORIGIN      
        1 atcggctcgc tgcagaccat tgtcctaatg gttgtggctt cccggcggtt tggtgagcgt
       61 attggggctt ggctggccgg cgtggccttg gtggccatcg tcggggtggc cgtggtcatg
      121 ttcggcgggg gcggtaatgc cggccttcac ctacggggtg acctgatggc actgggagcc
      181 atggtcctgt tctcggcgta ctttgtcctg gccaaggacg tccgagcccg gatcgacacg
      241 ttcacgttgc agaccctcac catgtccatc ggcgccgtcg tactcctacc catggcggcg
      301 tttgacgccg gccggatctt gcccggatgg ccatcgggct cccagtgggc atggctgtgc
      361 ctgctcctgg ccgtgccggg gacgggccac ttactcatga actgggcgca tctccacgtg
      421 agcctgagcc tcgccggcat gttgaccctg gccattccag cgctgtcggc cttcggtgcg
      481 tggctggcgt tggaccaggg actgtcactc gtccaggtgg tggggatgac ggtggtcgtg
      541 gtcagcctcg tcttcgtggt tcggcacgat gcccggctcc acgtcacgtc agacgagacc
      601 tgaccaggcc gtcgacgacg gtggcggtcg ggcggtcccc ggcgactcgg tccactacga
      661 cccgggtcag ccgagcagcg tgggctcgaa cggaaagtcg ctgagcagtt cgatgccggt
      721 ctccgtgatc aggagatgtt cctcgagctt gaccccctcg gaacccccct tggcaccgat
      781 gtaggactcc acgcagatag tcatgtcggg ctcgatcatc ccgtcgtagc cggaggccgc
      841 gaagtcgtgg cggtggtaca ggtagggata ttcgccagtc attccgacac cgtgcgacga
      901 caggtagtac cgctgagcgg cgaattcgtc agggatgtcc catgcccgtt cggcgtactc
      961 ccggaacgac actccggggc cgatgatccc catgttgtgg tggacctgct cgtgggccag
     1021 gccgtacaga cgcttctgtt cagccgtcgg ggcatcggga ccgacatgga acgtacgaga
     1081 gaagtccgag tagtagccgt ggcaccccac tacgtcggtg tccagcgcca ccagtgcgtt
     1141 cgccgggatg ggggagtcgc cggcttcctg gaaccacggg ttggtgttgg ttccggcggt
     1201 cattaggcgg gtctcgacgt agtcgccgcc ctcggcaatg accacccggt gtagttcggc
     1261 ccacagttcg ttctcggtga tcccaggccg gatggcatcg cgcacggcgt gcaccgctcg
     1321 ttcggtggcc cggaggctct ggcggataca ggtcagctcg tcgggtccct tgatggcccg
     1381 ggcccgctcg accggttctt gtgcgtcgac gattcggaag cctgcgccgg ccaacgcggt
     1441 ggatgctccg tggttgatcc gttcgaggcc gacggtggtg ccgtctccca ccacctcgcg
     1501 cagcagtgtt ccgacctcgt cggcccaccg gcgttccacg gcggagatgg ccgggccggc
     1561 ggccacgtaa ctagccgtgg tggccggccg aatctcatcg atggtcgaca ggccggtggc
     1621 gagatggtgg gctccggcga actcgaacag caccaccggg ccttcgacag ggaggaacag
     1681 gtaccgcgac ggatttctct ggtggaacac ctgcatgttg cgggcccccg tggcgtagcg
     1741 aacattgacc gggtcgaaca gcaggcaggc gtcgacgccg cgctggacca tttgcgagcg
     1801 gaggcggtcc cgccggaagt ggattagtgc ctcatggtcg atgctcgggg agcccgatgc
     1861 cgtgttggcc atgacgcgca caataggagc cgggccgcct ccggtggccc cggtaacatc
     1921 ggaagactgc cccgaccggg gccgccccga tcctgatcag gacagacccc atggacgtgc
     1981 gcgacaccat catcgatgcg gtacgcgccg cgctgggcga cttgggcgtc gaccctgtgc
     2041 cgagggtcgt ccagttggag cgtccggcca atccggacca tggcgagtgg tcgaccaacg
     2101 tggcgctcgc atcagctaag gctgttggcc gcaacccccg tgagctgggt gcccaactgg
     2161 cggaacgcct gaaggcctcg ccgccgaacc atgtggtggg cgtcgaagtg gccggtccgg
     2221 gtttcgtcaa cttccacctt gccgattcgt ggctgcacga cgtcttggcc gatgtggtca
     2281 ccgccgggac cgacggttgg gcccgggtcg acgagggtga cggcacccgg gtgattgtcg
     2341 agttcgtgag cgccaacccg accgggcccc tgc
//
LOCUS       DASCMR010000065         2564 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000332922, whole genome shotgun sequence.
ACCESSION   DASCMR010000065 DASCMR010000000
VERSION     DASCMR010000065.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2564)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2564)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2564
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000332922"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            60..1001
                     /locus_tag="QGG16_01620"
     CDS             60..1001
                     /locus_tag="QGG16_01620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24005.1"
                     /translation="MEIYGLSLPVTLSPFNSQSAEPKKHNAAGHNAYCRLMSVIYAVL
                     STFSIGLSDFFASDVTKKARASEVTSTVLLAGVVAMAVAAVFWSANPTTSDLVNGALA
                     GAANGVGILLLFVAYSRGSLRSAAPTAAVVMSGVPALWDVLVLGTSPSTITSVGLMLG
                     LIAIALSSYERGNSDNGSASLLIASLAGVVLGILLILLSYIGHDAGASPLLIQRTVAF
                     LVAISVARATGPRIFPNERSAFIVSFVAGIFGIAAVVLFVLALRGGSLAVVSVAGSQY
                     AAVAVLLGVAIRGQRMWWWQALGLGGSSLAVALIAIG"
     gene            1025..2443
                     /locus_tag="QGG16_01625"
     CDS             1025..2443
                     /locus_tag="QGG16_01625"
                     /inference="COORDINATES: protein motif:HMM:NF013080.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HJP24006.1"
                     /translation="MSDRQPNLLFIYADQHRADVMGCAGNDIVITPHLDRLASEGVRF
                     DQAWTESPICQPARASLLTGRYPNDHGVLGNFAGDYRPEWDTFPRRLQQAGYTTASIG
                     KTHFASWPMMVEPGTPAPTDQWIGSFGFDHVVEEFDRYVHVGEWETPYMRFLQEHDAL
                     DAYREVVSANFRGGDRHWNGVTSPLPQELDLTCFLADEAQQWMGRQPSDRPWFLQLSF
                     VQPHVPLMGDPIWADHYADADIERTARSEPTPATDEWATHLNGLRKHSHSELLTDDFV
                     LAGARQYYAMLSLIDQRIGDLLAQLEQHDQLDNTWIVYSADHGEMLGDHGLMAKMNFY
                     RSSVRVPLIVRPPAGTTGRVETAPVQAFDVAATLLDAGAAPGLDGAPSQSLVPLVTGA
                     DGATRDNVVSMIRIRPGLPTWHAISNGNWRATINADTGEVSELFNLVTDANETTNRVG
                     DLAVDDELDLLRDQLTSTLESA"
BASE COUNT          459 a          864 c          757 g          484 t
ORIGIN      
        1 atcaaagacc cgattcagga accgtgtggt cgcgcgggac cttcgtatag gccacagagg
       61 tggagatcta cggcttgtcg ttgccagtca cgctgagtcc gttcaactcc caaagtgccg
      121 agccgaaaaa acataacgct gcgggccaca atgcatactg ccgtctcatg tcggtgatct
      181 acgcggtgct ctcgacattc tcaattgggt tgagtgactt cttcgcgtcc gacgtcacca
      241 agaaggcgcg tgccagcgaa gtcacttcga cggtgctgct cgccggcgtt gtcgcaatgg
      301 cggttgccgc cgtgttctgg tctgccaatc ccacaacctc cgacctagtg aacggcgccc
      361 tcgccggggc cgctaacggt gttggcattc tgctgctgtt cgtcgcgtac tcccgtggct
      421 ctttgcgttc cgctgcgcca accgcagcgg tagtgatgtc tggcgtaccg gccttgtggg
      481 acgttctcgt attaggaact tcaccgtcga cgatcacctc agtcggcctc atgttgggcc
      541 tcatcgccat tgcgttgtcg tcctacgaac gtggaaattc ggataacggg tcggccagcc
      601 tccttattgc aagcctggcc ggggttgttc tcggcatctt gttgatcctg ctcagttata
      661 tcggacacga cgccggcgct tcaccactct taattcaacg aaccgtggct tttcttgtcg
      721 cgatttcggt tgctcgggct accgggcccc ggatcttccc aaatgagcga agcgccttca
      781 tcgtttcttt cgtagctgga atatttggga tcgcagcggt ggtcctcttc gttcttgccc
      841 tcaggggagg gagcctcgcc gtggtgagcg tcgcgggctc gcagtacgcg gcggtggccg
      901 tactccttgg tgttgcgata cgaggacaga gaatgtggtg gtggcaggcg ttaggactcg
      961 gcggttcaag cctcgctgtt gcactaatag caatcgggtg acacccgtgc gagggtgtga
     1021 tccagtgagc gaccgacagc ccaaccttct cttcatctac gccgaccagc accgcgccga
     1081 cgtcatgggt tgcgccggta acgacatcgt catcaccccc catctggacc gattggcctc
     1141 agagggcgtc cgctttgacc aggcctggac cgaaagcccg atctgtcaac cggcccgagc
     1201 ttcgctactg accggccgct accccaacga ccacggggtg ctcggcaact tcgccggcga
     1261 ctaccgaccc gaatgggaca ccttcccccg tcgtctgcaa caggccggct acaccacggc
     1321 gtcgatcggc aagacgcact tcgcgtcatg gccaatgatg gtcgagccgg gaacgccagc
     1381 gccgaccgac cagtggatcg gcagcttcgg gttcgaccac gtcgtcgagg agttcgaccg
     1441 ctacgtccac gtcggcgagt gggagacgcc ctacatgcgg ttcctgcagg aacacgacgc
     1501 cctcgacgcg taccgggagg tggtcagcgc caacttccgg ggcggggacc gccactggaa
     1561 cggcgtcacc tctcccctgc cccaggaact cgacctcacc tgcttcctgg ccgacgaagc
     1621 gcaacagtgg atgggccgcc aaccgagcga ccgaccatgg ttcctgcaac tgtcgttcgt
     1681 gcagccccat gtaccgctca tgggcgaccc gatctgggcc gaccactacg ccgacgccga
     1741 catcgagcgc accgcccggt ccgagccgac accggcgaca gacgaatggg ccacccacct
     1801 gaacgggctc cgcaaacact cacacagcga gctgctaacc gacgacttcg tgttggccgg
     1861 cgcccgccag tactacgcga tgctgtccct gatcgatcag cgcatcggtg acctactcgc
     1921 ccagttggag cagcatgacc agctcgacaa cacgtggatc gtctattcgg ccgaccacgg
     1981 tgagatgctc ggcgaccacg ggctcatggc caagatgaac ttctaccggt cctcggtccg
     2041 ggtgccgctc atcgtgcgtc cccccgcggg aaccacaggc cgggtcgaaa cagcgccggt
     2101 ccaggccttc gacgtcgccg ccaccctgct cgatgccggc gctgcgccgg gcctcgacgg
     2161 ggcgccgtcc cagtcgttgg tgcccctcgt gaccggcgcc gacggggcga cccgcgacaa
     2221 cgtcgtgagc atgatccgga tacgccccgg actgccgacc tggcacgcca tcagcaacgg
     2281 gaactggcgg gccaccatca acgccgacac cggcgaagtg agcgaactgt tcaacctcgt
     2341 caccgacgcc aacgagacca ccaaccgggt cggtgacctg gccgtcgacg acgagctcga
     2401 cctcctacgc gaccagctga cgtcgactct ggagtcggcg tgaccgggac caccgaggtg
     2461 gaacttgaat gaccctggtc aacgccgtct agccccaggt tcctgactcc ttccattgcc
     2521 aagccgttct gccagattac tgcccgactt aggatccgag tatg
//
LOCUS       DASCMR010000066         5273 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000333788, whole genome shotgun sequence.
ACCESSION   DASCMR010000066 DASCMR010000000
VERSION     DASCMR010000066.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5273)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5273)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5273
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000333788"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            156..770
                     /locus_tag="QGG16_01630"
     CDS             156..770
                     /locus_tag="QGG16_01630"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013854.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA];
                     GO_process: GO:0009146 - purine nucleoside triphosphate
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="non-canonical purine NTP pyrophosphatase"
                     /protein_id="HJP24007.1"
                     /translation="MGDSAALPRLVIASANPHKVAEISLVMEGLAHLEPRPACVPDVV
                     EDGDTLEANARLKAMAICEATGAAAVADDTGLEVDALGGAPGVHSSRYAADGGTGAEG
                     DAAANTARLLGELAGVPAGRRTARFRTVALVRHPDGTELIATGTVEGHVIEEPAGDGG
                     FGYDPVFVPVEGDGRTFAEMGDDKHAISHRGRAFRDLARRLDRS"
     gene            complement(870..3392)
                     /locus_tag="QGG16_01635"
     CDS             complement(870..3392)
                     /locus_tag="QGG16_01635"
                     /inference="COORDINATES: protein motif:HMM:NF012772.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HJP24008.1"
                     /translation="MTELPAPPTSDSATPDVLDGLVDAAPTGSARLDETGRAVRVNAH
                     WESTTGQPAEDALGDGWAADIDPDGRVDFLADLTRSLDNGTALRGRLRFLAADGSTRW
                     VDLSTTPVTSGSSGGTGALLTVVDVSDEMDETRRAHELTRVLEATPDPVAVLDPSGEY
                     VVWANDALQRHGAVTTSRTGEPVRILDLLDGWSQARYATAALPTVRSEGTWRGELRLV
                     GDSGTVPISAILVTHRDEEGAVDAISVMGRDLTDLHAAQERVEASEIRLAALVEHASD
                     LVCVIGEDGRIVYASPAVARILGSQAHELEGLDVTEVVHPDDVGMLGARAAEVVARPG
                     MSPAAEARVAHAEGGWRHMEIVATNLLGNPAVAGVVVNARDVTERVEVAAQLEERAYH
                     DELTGLPNRALLLDRLQDALHRAARHDRMVGVLFLDLDRFKVVNDSLGHGVGDDLLRE
                     AARRLERTIRPGDLVARLGGDEFVVVIADMVRTTDALAAAERVRTALARPVAFGADTT
                     VMSASVGIAVAHGTETPADLLRDADTAMYRAKEGGRDRAVMFGAHLRAQAVRRHSVEQ
                     ELRSALDEDRIEVHFQPVIRLADARVVGAEALARIRASSGELLQPAQFIDIAEDTGLI
                     ADLGARVLTIAVSRLAAWNERSQVSSGDEPLSMAVNVSARQLSDPMFPRLVASTLADN
                     RVDPTHVALEFTESALIAANPVTGSVLGELTALGVRMGLDDFGTGFSSLAYLKRFPID
                     FLKIDRSFVAGLREDEVRDPVPAAERDGDDTAIVTGTIALAHSLGLRVVAEGVETDEQ
                     LRILRRLRCDQAQGFHFSEPVTDAEFDRFLGPGLTGADISQN"
     gene            complement(3394..3475)
                     /locus_tag="QGG16_01640"
     tRNA            complement(3394..3475)
                     /locus_tag="QGG16_01640"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3439..3441),aa:Leu,seq:tag)
     gene            complement(3514..4092)
                     /locus_tag="QGG16_01645"
     CDS             complement(3514..4092)
                     /locus_tag="QGG16_01645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HJP24009.1"
                     /translation="MAADVDALEHGRFDVYTRLLKDRIVFLGTDVNDDMANFIIAQML
                     FLEAQDPEKPIWMYINSPGGSVTAGMAIYDTMQFVGPEVGTICMGLGASMGQFLLCAG
                     AQGKRYALPHARIMMHQPLGGVRGQASDIAIQAEQMAYTKKMLQERIAGHTGQTVETI
                     ESDSDRDRWFTADEAREYGIIDKVIVRRGEMH"
     gene            complement(4144..4812)
                     /gene="rpe"
                     /locus_tag="QGG16_01650"
     CDS             complement(4144..4812)
                     /gene="rpe"
                     /locus_tag="QGG16_01650"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HJP24010.1"
                     /translation="MSRPVRIAPSVLPVDFSRLGEECQTLEKAGVDLIHWDVMDGVFV
                     PNLTFGPDVIGSIRPLVDLEFEAHLMVVEPDRIIDRYVAAGCSTVLVHAEACDHLHRT
                     LGHIAELGATPGVALNPHTPASVIRHVRDLLGVVLVMTVNPGFGGQAYIPLEAKVAEV
                     AAMLEDYDCSVEVDGGIGPSTVADVVSAGADRLVSGSALFRDPEGLEHAVSDLRARAE
                     AAQA"
     gene            complement(4822..>5273)
                     /locus_tag="QGG16_01655"
     CDS             complement(4822..>5273)
                     /locus_tag="QGG16_01655"
                     /inference="COORDINATES: protein motif:HMM:NF018067.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008772 - [isocitrate dehydrogenase
                     (NADP+)] kinase activity [Evidence IEA];
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="isocitrate dehydrogenase
                     kinase/phosphatase-domain containing protein"
                     /protein_id="HJP24011.1"
                     /translation="SIKDLAVANVFPGDLFTKNFGVTRHGNVVFYDYDELVLLEECRF
                     RAIPQTDDPADEMRSQPWFSVEPGDVFPEQFPTFMAFPSDVSSEVRKRFDEVHADLYT
                     VAFWKDVQSRLARRDLPEFYPYSERLRFRRKPVEAADSRAVDSVTPG"
BASE COUNT          895 a         1726 c         1792 g          860 t
ORIGIN      
        1 ggtcaggcct tcgaacgctc ccaactcgat gcgctcgtgg acttggccac cggcggaata
       61 gccgacatcg tcgaggccca gcgggccctt ttggctacgc cgcccgccac ccggacctga
      121 ccgacatcga aaacgaggcc gagaccgggg cgccaatggg ggactctgcg gcgctgcccc
      181 gcctggtgat agccagcgca aatccccaca aggtggccga gatcagcttg gtcatggagg
      241 gtctggccca cctcgaaccc cgaccggcct gcgtgcccga tgtggtcgag gacggcgaca
      301 ccctggaagc caacgcccgc ctgaaggcca tggccatctg tgaagccacc ggagcggccg
      361 cggtggccga cgacaccggt ctggaggtcg acgccctcgg tggtgcgccc ggcgtgcact
      421 cgtcccgcta cgcggcggat gggggtaccg gcgccgaggg cgacgcggcg gccaacaccg
      481 ctcgtctact cggtgaacta gcgggcgttc cggccggtcg tcggacggca cggttccgaa
      541 ccgtggccct cgtgcggcac cccgacggca ccgagctgat cgccacgggc accgttgagg
      601 ggcacgtcat cgaggaaccg gctggtgatg gtggcttcgg ctatgacccg gtgttcgtac
      661 ccgtggaggg cgacggtcga acgtttgctg agatgggcga cgacaagcac gccatctcac
      721 accgtggccg ggcctttcgc gatctggcga ggcgcctaga tcgctcctga acttccggtt
      781 cgtcccgtcg tcccactgcg gcggtttcgg gacgtctccc ggtggcgggt atctcagttc
      841 gagggactgg tggacccgag ggtcgaccgt cagttctggg agatgtccgc gccagtcagg
      901 cccggtccga ggaaccgatc gaactccgcg tcggtgaccg gttcggaaaa gtggaagccc
      961 tgggcctggt cgcaacgcag gcgtcggaga atcctgagct gctcatcggt ctccactcct
     1021 tcggctacca cccgcagacc aaggctgtgg gccagcgcaa tggtgccggt cacgatggct
     1081 gtgtcgtcgc cgtcccgttc ggctgccggc accggatcac ggacttcgtc ctctcggaga
     1141 ccggccacga aggaccggtc gatcttcagg aagtcgatgg ggaatcgctt gaggtacgcc
     1201 agggacgaga acccggtccc gaagtcgtcc aggcccatcc gtacgccgag ggcagttaac
     1261 tcgccgagca ccgacccggt caccggatta gctgcaatca gggcactctc ggtgaactcg
     1321 agggccacgt gggtcgggtc gacccggttg tcagccagcg tggatgcgac cagacggggg
     1381 aacatcggat ccgacagctg acgagccgac acgttgacgg ccatcgatag cggctcgtcg
     1441 ccggagctca cctgggaccg ctcattccac gcggcgaggc gactcacggc aatggtcagc
     1501 acccgggcac ccagatcggc aatgagtccc gtgtcctcgg cgatgtcgat gaactgggcc
     1561 ggctggagca gttcgccgct cgaggcccgg atccgtgcga gggcctcagc cccgaccacc
     1621 cgggcatcgg ccagacgaat caccggctgg aagtgaacct cgattcggtc ctcgtcgagt
     1681 gccgagcgga gctcctgctc gaccgaatgg cggcgcaccg cctgggcccg taggtgggca
     1741 ccgaacatga ccgcacggtc gcggccaccc tccttggccc ggtacatggc ggtgtcggcg
     1801 tcgcgtagca ggtcggccgg ggtctcggtg ccgtgggcca ccgctatgcc cacgctggcc
     1861 gacatcacag tggtgtcggc accgaacgcc actgggcggg ccagagcggt tcggacccgt
     1921 tcggcggcgg ccagggcatc agtggtccga accatgtcgg caatgaccac cacaaactcg
     1981 tcgccaccaa gacgggccac taggtcaccg ggacggatgg tccgttcgag gcgtcgggca
     2041 gcctcccgga gcaggtcgtc gccgacgccg tggcccaggg aatcgttaac caccttgaat
     2101 cggtcgaggt ccaagaacag cacgccgacc atccggtcgt ggcgggccgc tcgatgcaac
     2161 gcatcttgaa gtctgtccaa cagcaaggct cggttaggga gcccggtgag ctcgtcgtga
     2221 taagcccgct cctcgagctg ggcggccacc tcaactcgtt cagtgacgtc ccgggcgttg
     2281 accaccacgc cggctaccgc cggattgccg agcagattgg tggccacgat ctccatgtgg
     2341 cgccagccgc cctcggcgtg ggctactcgc gcctcggcgg ccggtgacat tccggggcgg
     2401 gccaccacct cggcggcccg ggcgcccaac attccgacat cgtcggggtg gaccacttca
     2461 gtgacgtcca gaccctcgag ttcgtgagct tggcttccga ggatgcgggc cactgccggg
     2521 ctggcgtaga cgatgcgtcc gtcctcgccg atcacgcaca ccaggtccga tgcgtgctcg
     2581 accagggcgg ccaggcggat ctcggatgct tcgacgcgtt cctgggcggc gtgcaggtcg
     2641 gtgagatcgc gacccatgac cgagatggcg tccacggcac cttcctcgtc gcggtgggtc
     2701 accaggatcg ccgagatagg cacagtcccg ctgtcgccca ccagtcggag ctcgcctcgc
     2761 cacgttccct cggaccggac tgtgggcagc gccgcggtgg cgtaccgagc ctgggaccaa
     2821 ccatccaaca ggtccaggat gcgaaccggc tcaccggtcc gggaggtcgt tacggcaccg
     2881 tggcgctgta gggcgtcgtt ggcccacacc acgtattcgc ctgaagggtc gagtacggcc
     2941 accggatcgg gtgtggcctc cagcactcgg gtcaactcgt gggcccgacg agtctcgtcc
     3001 atttcgtcgg agacgtcgac cacggtcagg agagcacccg tgccaccgga agaacccgaa
     3061 gtcacgggtg tggtggacag gtcaacccag cgggtggagc catcggcggc caggaaccgg
     3121 agtcgacctc gcagtgctgt cccattgtct agcgaacgag tcagatcggc caggaagtca
     3181 acccggccgt cggggtcgat gtcggcggcc cagccatcgc ccagggcatc ttcggcgggc
     3241 tggccggtgg tggattccca gtgggcgttc acccggacgg ccctgcccgt ctcgtccaac
     3301 ctcgccgaac ctgtcggagc cgcgtcaacc aggccgtcga gaacgtcagg tgtcgcggaa
     3361 tcagacgtcg ggggcgcggg caactcggtc acgtgcggac ggggggattc gaacccccac
     3421 gcctttcggc gccggctcct aaagccggtg cgtctgccag ttccgccacg tccgcgtcac
     3481 tgaaccctat ggggttcggt tcaaatgccc ggttcagtgc atctcgccgc ggcgcacgat
     3541 caccttgtcg atgatcccgt attcgcgggc ctcgtcggcg gtgaaccagc ggtcgcggtc
     3601 gctgtcggac tcgatggtct cgaccgtctg accggtgtgt ccggcgatgc gttcctgcag
     3661 cattttcttg gtgtaagcca tctgctcggc ctgaatggcg atatcggagg cctgcccacg
     3721 gaccccaccg aggggctggt gcatcatgat ccgggcgtgg gggagggcgt agcgcttccc
     3781 ctgggccccg gcgcacaaca ggaactggcc catcgaagca cccagaccca tgcagatggt
     3841 gcccacctcg gggcccacga actgcatggt gtcgtagatg gccatgccgg ctgtgaccga
     3901 accgccgggt gagttgatgt acatccagat cggtttctcg ggatcctggg cctctaggaa
     3961 gagcatctgg gcaatgatga agttcgccat gtcgtcgttc acgtcggtgc cgaggaagac
     4021 aatgcggtcc ttcagcagcc gggtgtagac gtcgaacctg ccgtgctcga gagcatcaac
     4081 gtcggcggcc atcggtgaga gtgagggggc gttcatggag gcgcagggta gcggcgcggc
     4141 cggtcaggcc tgcgccgcct cggcgcgggc acgcaggtcc gacacggcgt gctcaaggcc
     4201 ctccgggtcc cggaacaggg cgcttcctga aaccagccga tcagcgccgg cggacaccac
     4261 gtcggccacc gtcgatggtc cgataccgcc gtcgacctcc actgagcagt cgtagtcctc
     4321 aagcatggcg gccacttcgg cgacctttgc ctcaaggggg atgtaggcct gtccgccgaa
     4381 tcctgggttg accgtcatga ccagcaccac gcccagtagg tctcgtacat ggcggatcac
     4441 gctggccggg gtgtgcgggt tcaacgcaac tccgggggtg gcgcccagtt cggcaatgtg
     4501 acccagcgtg cggtgcaggt ggtcgcacgc ctcggcgtgg acgagcaccg tcgaacaacc
     4561 cgcggcgacg tagcggtcga tgatgcgatc gggttcaacc accatgaggt gggcctcgaa
     4621 ctccaggtcg accagcggtc ggatcgaccc gatgacgtcg ggcccgaacg tcaggttggg
     4681 cacgaacacg ccgtccatga cgtcccagtg gatgagatca acaccggcct tctcgagtgt
     4741 ctggcattcc tctccaaggc gggagaagtc gacgggcaga accgacgggg cgatcctcac
     4801 ggggcgtgac atcagccgag actaacccgg tgtcacggag tcgacggcac gtgaatcggc
     4861 ggcttcgacc ggtttgcggc ggaatcgcaa gcgctcggag taggggtaga actcgggcag
     4921 gtcgcggcgg gccaggcgac tctggacgtc cttccagaag gccaccgtgt acaggtcggc
     4981 atgcacctcg tcgaaccgct tgcgaacctc tgacgacacg tcgctgggga aggccatgaa
     5041 ggttgggaac tgctcaggga acacgtcacc cggctccacc gagaaccacg gctgggatcg
     5101 catctcgtcg gccggatcat cggtttgggg gatggcccgg aagcggcact cttcaagcag
     5161 caccagttcg tcgtagtcgt aaaacacgac gttgccatga cgggtcacgc caaagttctt
     5221 ggtgaagagg tcgccgggga acacgttggc gactgccaga tccttgatgg acc
//
LOCUS       DASCMR010000067        12558 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000355416, whole genome shotgun sequence.
ACCESSION   DASCMR010000067 DASCMR010000000
VERSION     DASCMR010000067.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 12558)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12558)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12558
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000355416"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..945)
                     /locus_tag="QGG16_01660"
     CDS             complement(<1..945)
                     /locus_tag="QGG16_01660"
                     /inference="COORDINATES: protein motif:HMM:NF013714.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HJP24012.1"
                     /translation="MLEVSSPEARLVDELQAILGAGGWLEPSDALHLTVDYRGVFSGT
                     PLLVARPNSVDEVRAVVRLCAAAGVAIVSQGGHTSLSGGSVPTTDRPSVLLSTSRMNR
                     IVSVDPARFTITAEAGCTIEQVQQAAAAVDLELGMDWGARGTATVGGAVSTNAGGLNV
                     LRYGPARDSVLGLEVVLADGEVFDGLRALRKDNTGYDLKHLFIGGEGSLGVVTQAVLR
                     LHPRQDHHRTMFAALSDLDAVHELFAMACARDHGGLTAFELVPETGVAGTIGAFGVLR
                     PLATVADWYLLARFSGSSSMDATAEGFLADALGAGLVVD"
     gene            complement(994..1785)
                     /locus_tag="QGG16_01665"
     CDS             complement(994..1785)
                     /locus_tag="QGG16_01665"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJP24013.1"
                     /translation="MPDLIKRHPEQQLVDLADRVVVVTGGSRGLGRAMVEAFARCGAN
                     VVVASRKLENCTALADEVAEATGRRILPVVCHVGDWDQCDALVQATYEAFGRCDVLVN
                     NAGSSPLYPSLEEVTPELFDKTIAVNLRGTFRLSAAFGTRMVADGGGSIINVSSISAS
                     APTAVEAIYGAAKAGVHSLTESFARAYGPTVRVNCLQPGPFLTDISTHWPESAHEGFR
                     RRLALGRAGEAHEIVGAALYLASDASSFATGSVIKVDGGAVYGTG"
     gene            1949..2485
                     /locus_tag="QGG16_01670"
     CDS             1949..2485
                     /locus_tag="QGG16_01670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HJP24014.1"
                     /translation="MTDGFRTRGINHLALVCRDMAATVAFYEGVLGLPLVKTIELGGG
                     GGQHFFFDCGNGDSIAFFWFTDSPPAAPGVASPAAMPGEGDFRTAHGSMNHVALDVDP
                     ADIDGYVQRLRDAGVPCTEVMNHDDSEWGVAADPGGSVFVRSIYFMDPDGIQLEFAAW
                     TRTLGPGDVSHAPARGSD"
     gene            complement(2522..4288)
                     /gene="xsc"
                     /locus_tag="QGG16_01675"
     CDS             complement(2522..4288)
                     /gene="xsc"
                     /locus_tag="QGG16_01675"
                     /EC_number="2.3.3.15"
                     /inference="COORDINATES: protein motif:HMM:NF005713.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050487 - sulfoacetaldehyde
                     acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0019529 - taurine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfoacetaldehyde acetyltransferase"
                     /protein_id="HJP24015.1"
                     /translation="MTRMTPSEAFVETMVANDVTTTFGIMGSAFMDAMDIFAPAGIRL
                     VPVVHEQGAAHMADGYARVSGRHGVVIGQNGPGVSNCVTAIAAAFWAHSPVVMITPET
                     GTMGQGLGGFQEANQLPMFQEFVKYQGHIANENRMAEITARCFDRAMSEIGPTQLNIP
                     RDRFYGDIDVEIAKPMVLDRGPGGDDSLNAAADMLAAAKFPVMVSGGGVVMGDAMAEA
                     VALAERLGCPVVNSYLHNDSFPASHPQWCGPLGYQGSKAAMKLIAQADVVLALGTRLG
                     PFGTLPQHDMDYWPKDAKIIQVDADHKMLGLVKKISVGICGDAGAAAVALTDRLADRT
                     LACDATTVERAQLMADEKADWEAELDDWTHETDDFSIDMIKEAVQEKDNWMHPRQVLR
                     ELEKAMPARVMVSTDIGNINSVANSYLRFEEPRSFFAAMSWGNCGYALPTIIGAKAAA
                     PDRPAVSYAGDGAWAMSMVETMTAVRHDIPVTAVVFHNRQWGAEKKNQVDFYGHRFVA
                     GELDGEENYAEIARAMGAEGVRVNQLEDVGPALTAAIDAQMNDGKTTVIEVMCTKELG
                     DPFRKDALSTPVRHLEKYADFV"
     gene            complement(4487..5665)
                     /gene="argE"
                     /locus_tag="QGG16_01680"
     CDS             complement(4487..5665)
                     /gene="argE"
                     /locus_tag="QGG16_01680"
                     /EC_number="3.5.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR01892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008777 - acetylornithine deacetylase
                     activity [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine deacetylase"
                     /protein_id="HJP24016.1"
                     /translation="MPAPTTDGSPVDQMLAILDGLIAFPSVALTPNVDLIAHVEDLLR
                     PYCSEILLSHDETKTKANLFATIGPVVDGGIMLAGHSDVVPVDLGDWTSPPFTATRRG
                     DRIYGRGTADMKGFLACVLALVPRWAALDLVRPVHVALTFDEEDGFHGAPILIDSLAD
                     APRPAVAIVGEPTGLKVVGAHKGCYEYTTTVTGMNGHSSRPAEAVSAVHYATRWIGGL
                     LGLEEELVERAPAGSRFEPIHTTTNVGVINGGLARCTVAGGCSFDWEMRPVQGSDAGF
                     VKDRMAALESGLLAEMRAVHPEAAIETEAVCEIDGLEWEESSPALDLMRSLLGGDPPV
                     GVVAYGTEAGLYQAAGMPSVVWGPGDIAVAHRPDEFVEVSDLEVCLELLLGLGSHLTD
                     "
     gene            complement(5668..6852)
                     /locus_tag="QGG16_01685"
     CDS             complement(5668..6852)
                     /locus_tag="QGG16_01685"
                     /inference="COORDINATES: protein motif:HMM:NF012766.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HJP24017.1"
                     /translation="MPDVELPFSREEYAQRLAKVRRAMEAHGIEVLVAADPSNMSWLT
                     GYDGWSFYTPQAVVVTHDGEPWWWGRRMDANGARLTVYMDESRILDYSDDHVMSTEKH
                     AFGQLADLLDGMGHGSARVGVELDNYYYSAAAHQNLCARLPDADVVDATALVNWQRGV
                     KSDQELVYMRRGARIVERMHARIRDIIEPGMRKCDLVAEIYATGVSGTEEFGGDYPAF
                     VPMMPTGAEASAPHLTWDDKPLKSGEGSFFEIAGAHRRYQLPLCRTSFLGTPPDEMRR
                     AEKAVLDGLDAGLGAARAGSRACDMARAFFSVMEDAGFHKEGRCGYPIGISYPPDWGE
                     RTISLRDTDESVLEPGMTFHFMPGLWMDTWGLEITESFVVVENGPGEPLADVSRGIHV
                     KG"
     gene            complement(6913..7302)
                     /locus_tag="QGG16_01690"
     CDS             complement(6913..7302)
                     /locus_tag="QGG16_01690"
                     /inference="COORDINATES: protein motif:HMM:NF017935.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF983 domain-containing protein"
                     /protein_id="HJP24018.1"
                     /translation="MRVLFRGIVAACPGCGGRGLFRRPSRRGWLRIREACPSCGLVFE
                     RTHGHWIGAVAVNTVLSTVAILIVLVVAFVVAWPDPEVLEVLVPTVATSLVAPLAFAP
                     ISRSLWTAMVVLVLPPDDPPSVGTRPI"
     gene            7394..8221
                     /locus_tag="QGG16_01695"
     CDS             7394..8221
                     /locus_tag="QGG16_01695"
                     /inference="COORDINATES: protein motif:HMM:NF017532.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HJP24019.1"
                     /translation="MPILTDEQVSRYRNDGWLAPINVLTTAEASAALAALEEAEARFP
                     EDLHGDHRNNAHLVLPFLADLALHPTILGCVASLVDRPAALLNSVLFIKDPDATAYVS
                     WHQDSTYMGIEGTDMVTAWLALTPSTSENGCVAMAPATHLDGIRPHEDRYGQDNILTR
                     GQHVSGFDPDTAVDVVLQPGQMSLHHPHLIHGSRPNESDTRRVGVAFQSYIGVDARPE
                     RGEHHVLVVGNDPVDPAFLVVPRPETEMTDDGRAVRASANAALSDVLYHGATERRSY"
     gene            complement(8345..9874)
                     /locus_tag="QGG16_01700"
     CDS             complement(8345..9874)
                     /locus_tag="QGG16_01700"
                     /inference="COORDINATES: protein motif:HMM:NF018012.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine methyltransferase family protein"
                     /protein_id="HJP24020.1"
                     /translation="MIGERRRGGRGARAAARATESVAGVLQPRRRIPTYDLLDEGSLD
                     RLEAHADWILDEIGIEIRGDEEAVELFRAVGARVEGERVRFDPGLARSLCTTAPAEFA
                     MHGRDERHTVTVGGDHVVFSPAYGSPFVSDLDDGRRYATLVDFENLVKLAYVSPWLQH
                     SGGTVCEPVDVPVNKRHLDMVYAHLRWSTKPFMGAVTAPERAEDSVAMARIVFGADRL
                     ERDCVVQGNINVNSPLVFDDVMTGALKTYARANQANVISPFIIGGAMGPVTQPALIAQ
                     AHAETMVGIALAQLVRSGSPVVYGSFLTTMDLRSGAPTFGTPEAVLATYAMGQLSRRL
                     GLPLRCGGHYTASKVADAQAMMESADAMGASIYAGANFVHQAAGWLEGGLVTGYEKFV
                     MDADHLGMLTRRMGGLVVDDDSLAVEGYREAGPGTAHLGTAHTLAHFEEANYNSVLLD
                     TNSFEQWAEDGGRDMQQRANALWKRMLADYEPPEIDPGTDSELQAFMAERKGSEDDAW
                     Y"
     gene            complement(10004..10879)
                     /locus_tag="QGG16_01705"
     CDS             complement(10004..10879)
                     /locus_tag="QGG16_01705"
                     /inference="COORDINATES: protein motif:HMM:NF017532.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HJP24021.1"
                     /translation="MLTDEQVETFRRDGVLTVPNAVTPDQLAALRADMDRWVEESRAH
                     TGPYGETIDGRPRFDVQPGHSKDRPALRRVSAPTEVSAAHREVMANSAMVDMVADLIG
                     PDVRLHHTKVNTKLPGAATEVQWHQDFPFTPHSNADLMTALLMVDEVTVENGPLEVAP
                     GSHNGPIHSLWHDGVFTGAICPDAVAAMRDAAVSCTGPAGSVCLMHTRLAHASAPNRS
                     DRSRTLFICVYGAGDAVPYGPNPVPTAHQGLFVRGSDPGRVRTGDFEMDLPEPPTGAS
                     FFTQQEASVVDPGRG"
     gene            complement(10890..11567)
                     /locus_tag="QGG16_01710"
     CDS             complement(10890..11567)
                     /locus_tag="QGG16_01710"
                     /inference="COORDINATES: protein motif:HMM:NF018024.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1028 domain-containing protein"
                     /protein_id="HJP24022.1"
                     /translation="MTFSITGHCARTGMAGVAITTSSICVGSRCPHARAGVGAVATQN
                     ITDPTLATRVFECLQAGETAAEAVATVMDGRANAEYRQLAVVDMAGRTGHFTGAHILG
                     TNRVVEGDHCIAAGNLLSTPEVPAAMVAGFEADPGAHLADRLLLGLEAGLAAGGEEGP
                     VRSAALLVHHEQPFALVDLRCDWNEDDPVVVLRRLWTDYEPQMQPYLDRAVDPGVAPS
                     YGVAGDR"
     gene            complement(11589..>12558)
                     /locus_tag="QGG16_01715"
     CDS             complement(11589..>12558)
                     /locus_tag="QGG16_01715"
                     /inference="COORDINATES: protein motif:HMM:NF013044.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HJP24023.1"
                     /translation="PEVGDHLVWSIADQPVFCVRDGDDRVRTFSNVCRHRMMTLVAGD
                     GNSRRITCPYHSWTYDLGGQLVGTNHMERTDGFDRVDICLPEIRTELWEGWIYCTLDD
                     DAPSVADLLAPIEGFVAPYGVADYVPIHRVDEVWDGNWKFLTENFMEGYHLPVTHRVT
                     LGTWMPMDSVVFPDESHGAFTYQMFEKDENAVYGRAHPDNDRLEGAWRSTTFMPTVFP
                     AHMYILAPDHLWYLSLRPRGTGQVELRFGIALAPEVHASLVEPEAWITEMVDFFTAVC
                     EEDRKVVEGIHVGSRSPLATPGPLSWLEHELHHFMGYLADRLTSTD"
BASE COUNT         2205 a         4292 c         4008 g         2053 t
ORIGIN      
        1 gtccaccacc aggccggcac cgagcgcgtc ggccagaaac ccctcggcag tggcgtccat
       61 cgaagagcta ccggaaaacc gggccagcaa gtaccagtcc gccaccgtcg ccagcggacg
      121 cagcacaccg aacgcgccaa tggtgccggc cactccggtc tcggggacca gttcaaaagc
      181 cgtcaagccg ccgtggtccc gcgcgcaggc catggcaaag agctcgtgca cggcatctag
      241 gtcggacagc gcggcgaaca tcgtgcggtg atggtcctgt cgggggtgga ggcgtagcac
      301 cgcctgggtc acgacaccca gtgatccctc gcctccgatg aacaggtgct tgaggtcgta
      361 cccggtgttg tcctttcgca gcgcccgcag cccgtcgaac acctcgccgt cggccagcac
      421 aacctcgagt cccagcacgc tgtcccgggc tggcccgtaa cgcagcacgt ttaagccacc
      481 agcgttggtc gacaccgcgc cacccaccgt ggccgtgccc cgggcccccc agtccatgcc
      541 cagctccaga tctaccgcgg cggccgcctg ctggacctgc tcgatggtgc agcccgcctc
      601 ggcggtgatg gtgaagcggg ccgggtcgac cgaaacgatc cggttcatgc gggaggtgga
      661 caagaggacc gatggacgat ccgtggtggg aactgaacca ccagacagcg acgtgtggcc
      721 tccctggctg acgatggcca cgccggccgc cgcgcacagt cgcaccacgg cccggacctc
      781 gtcgactgag ttgggtcggg ccaccaggag cggcgtcccg gagaacacac cccggtagtc
      841 gacggtcaga tgcagcgcgt cggacggctc cagccatccc ccggcgccaa ggatggcctg
      901 tagttcgtcg accagtcgtg cttccggcga ggagacctca agcatcggcg catcgtagga
      961 caaccccaca aggccgatcc gttgagggac ccgtcagccg gtgccgtaca ccgcgccacc
     1021 gtcaaccttg atgaccgagc cggtggcgaa cgacgaagcg tccgacgcca ggtacagcgc
     1081 cgcaccaacg atctcgtgcg cctcgccggc cctccccagg gccagccgac ggcggaaccc
     1141 ctcatgtgcg ctttccggcc agtgggtgga gatgtcagtc aggaacgggc cgggttgcag
     1201 gcagttgacc cgcaccgtcg gcccgtaggc ccgggcgaac gactcggtca acgaatgtac
     1261 gccagccttg gcagctccgt agatggcctc gacggccgta ggcgccgatg ccgagatgga
     1321 gctcacgttg atgatgctcc cgccaccgtc ggccaccatc cgggtaccaa aggcggccga
     1381 caggcgaaac gtgccccgta ggttcacggc gatcgtcttg tcgaagagct caggcgtgac
     1441 ctcctctaac gacgggtaga gcggtgagct gccggcgttg ttgaccagca cgtcgcaacg
     1501 gccgaaggcc tcataggtgg cctggaccag ggcatcgcac tggtcccagt cgccgacgtg
     1561 gcacaccacc gggaggatcc ggcggcccgt cgcctcggcc acctcgtcag cgagggcggt
     1621 gcagttctcg agcttgcggc tggccaccac cacgttggct ccgcaccggg cgaacgcctc
     1681 caccatggcc cggcctagtc cccggctccc tccggtcacc acgaccaccc gatcggccag
     1741 atcgacgagt tgctgttcag ggtggcgttt gatcaggtcc ggcacagaag cgattctgac
     1801 agcccgccta gggtgcgccc atgaccggag cgggtgacca cgatcggggg gtcctccctc
     1861 taccaatcgc catcctgaac ggccgcaagt cactcagcat gcggttcacc cccgacactc
     1921 gacatccggt gcgcgaggat caacagccat gaccgatgga ttccgcaccc ggggcatcaa
     1981 tcacctggcg ttggtgtgtc gcgacatggc tgccaccgtg gccttctacg agggcgtgct
     2041 gggcctgccg ctggtcaaga ccattgagtt gggcggcggt gggggccagc acttcttctt
     2101 cgactgtggc aacggcgact cgattgcctt cttctggttc accgattccc caccggccgc
     2161 tcccggggtg gcctctccag ccgccatgcc cggcgagggt gacttccgca cggcccacgg
     2221 ctcgatgaac cacgtggccc tcgatgtcga ccccgccgac atcgacggtt acgtccagcg
     2281 cctacgcgac gcgggcgtgc cctgcaccga agtcatgaac cacgacgatt ccgaatgggg
     2341 agtggccgct gaccccggag gaagcgtgtt cgtccggtcg atctatttca tggaccctga
     2401 cggcatccaa ctggagttcg ccgcctggac gcgcaccctg gggcccggcg acgtgtctca
     2461 cgcgccggcc cgagggtctg actgacgcct tcgccggcgg tccggcacca cggatagagg
     2521 cttagacgaa gtcggcgtac ttctcgaggt ggcgcaccgg ggtggacagt gcatccttgc
     2581 ggaatgggtc ccccagttcc ttggtgcaca tgacctcgat gaccgtggtc ttgccgtcgt
     2641 tcatctgggc gtcgatagcg gctgtcagtg cgggaccgac gtcctccaac tggttcaccc
     2701 tgacgccctc ggctcccatg gcccgggcga tctcggcgta gttctcctcg ccgtccagtt
     2761 cgccggccac gaaccggtgg ccgtagaagt cgacctgatt cttcttctcg gcaccccact
     2821 ggcggttgtg gaagaccacc gcggtaaccg gaatgtcgtg gcgcactgcg gtcatcgtct
     2881 cgaccatact catggcccac gcgccgtcac cggcgtacga gacggctggt cgatccggag
     2941 cagcggcctt ggcgccgatg atggtcggca gggcgtaacc gcagttgccc cagctcatgg
     3001 cggcgaagaa ggaacggggc tcctcgaagc gcaggtaact gttggcaacc gagttgatgt
     3061 tgccgatgtc agtggacacc atgacccggg ccggcatggc cttctccagc tcgcgtagga
     3121 cctggcgggg gtgcatccag ttgtccttct cctggacggc ctccttgatc atgtcgatgc
     3181 tgaagtcatc ggtctcgtgc gtccagtcgt ccagctcggc ttcccagtca gccttctcgt
     3241 cggccatgag ctgggcccgc tcgaccgtcg tagcgtcgca ggccagggtg cgatcagcca
     3301 gtcggtcggt gagagcaacg gcagccgcac cggcgtcgcc gcagatcccg acagagatct
     3361 tcttgaccag gccgagcatc ttgtggtcgg cgtcgacctg gatgatcttg gcgtccttgg
     3421 gccaatagtc catgtcgtgc tggggcaggg tgccgaacgg gccgaggcgg gttcccagcg
     3481 ccaggacgac gtcggcctgg gcgatcaact tcatggcagc cttggagccc tggtagccca
     3541 gcgggccgca ccactgcgga tggctggccg ggaacgagtc gttgtgtagg taactgttca
     3601 ccaccgggca gcccaggcgc tcggccagag caacggcctc ggccatggcg tcgcccatga
     3661 ccacgccgcc gcccgacacc atcaccggga acttcgcagc agcgagcatg tcggctgcag
     3721 cgttcaggct gtcgtcgcct ccggggccac gatcgagcac cattggctta gcgatctcca
     3781 cgtcgatgtc gccgtagaag cggtcgcggg ggatgttcag ctgggtggga ccgatctcag
     3841 acatggcccg gtcgaagcag cgggcggtga tctcggccat acgattctca ttggcaatgt
     3901 gaccctggta cttgacgaac tcctggaaca tcgggagttg gttggcctcc tggaagcctc
     3961 ctaggccctg gcccatggtc ccggtctccg gggtgatcat gaccaccggg ctgtgggccc
     4021 aaaaggccgc ggcgatggcc gtcacgcagt tggagacgcc ggggccattt tggccgatga
     4081 ccaccccgtg gcgaccgctg acccgggcat agccgtcggc catgtgggca gcaccctgct
     4141 cgtggactac aggcaccagg cggatgccgg ccggagcgaa gatgtccatg gcgtccatga
     4201 acgccgagcc catgatgccg aacgtggtgg tgacgtcatt ggccaccatc gtctcgacga
     4261 aggcctcgct gggggtcatg cgggtcatcg gtgcactcct accgggtgtg ggttcgatca
     4321 gacacgccac cgggagcaac tctcgagcgc gtggaagtga gagcctataa cggatccgtg
     4381 agactgtcta gagccatcgt gcgatggtca aatcacctac gacggcctgc tgggaacttc
     4441 cacgacaggg cgtcccggat gacccgagtc cccggccatg caggcctcag tcggtcaggt
     4501 ggctgcccag tcccaggagc agttccaggc agacctcgag gtcggacacc tcgacgaact
     4561 cgtcgggtcg atgggccaca gcgatgtcac cgggtcccca caccaccgag ggcatcccgg
     4621 ccgcctggta gagaccggcc tcggtcccgt aggccaccac cccgaccggt ggatcaccac
     4681 ccagcaggga ccgcatgagg tccagagccg gggacgactc ctcccattca aggccgtcga
     4741 tctcacacac cgcctcggtc tcgatggcgg cttcagggtg cacggcgcgc atctcggcca
     4801 atagccccga ctcaagtgca gccatccggt ccttcacgaa cccggcgtcg ctgccctgca
     4861 cggggcgcat ctcccagtcg aacgaacagc ccccggccac tgtgcagcga gccagcccac
     4921 cgttgatcac gccaacgttc gtagtggtat gtatcggctc gaaccgacta ccggccggcg
     4981 cccgctcgac cagttcttcc tcgaggccca gcagaccgcc gatccaacgg gtggcgtagt
     5041 gcacggcact aaccgcctcg gccgggcggg aactgtgtcc gttcataccg gtgaccgtgg
     5101 tggtgtactc ataacagccc ttgtgggccc caaccacttt caggccggtc ggctcgccga
     5161 cgatggccac ggcgggccgg ggcgcgtcgg ccaacgaatc aatgaggatc ggagcgccgt
     5221 ggaaaccgtc ctcctcgtcg aaggtgaggg ccacgtggac gggccgaacc agatcgagcg
     5281 ccgcccatcg ggggaccagg gccagcacgc aggccaagaa tcccttcatg tcggccgtgc
     5341 cccgcccgta gatgcggtcg ccacggcggg tggcagtgaa gggcggcgag gtccagtcac
     5401 caaggtcgac ggggaccaca tcactgtggc cggccaacat gatcccgccg tcgacgaccg
     5461 gtccgatggt ggcgaagagg ttggccttcg tcttggtctc gtcatgcgag agcagaatct
     5521 ccgagcagta cggccggagc agatcctcca cgtgggctat caggtcgacg ttcggggtga
     5581 gggcgaccga cgggaaggcg atcaggccgt cgaggatggc cagcatctga tcgactggtg
     5641 acccgtcagt ggtcggcgca ggcacggtca ccccttcacg tggatgccgc gagacacgtc
     5701 ggccagtggc tcgccgggac cgttctcgac gaccacgaag ctctcggtga tctccaggcc
     5761 ccaggtgtcc atccagaggc cgggcatgaa gtggaaggtc atgcccggct ccagcaccga
     5821 ctcgtcggta tctcgcagcg agatggtccg ctccccccag tccggcgggt agctgatgcc
     5881 aatggggtaa ccacagcggc cctccttgtg gaagccagcg tcctccatca ccgagaaaaa
     5941 ggctcgggcc atgtcgcacg cccggctacc ggcccgggcc gcgcccaacc ctgcgtcgag
     6001 gccgtcaagc acggcctttt cggcccggcg catctcgtcg ggcggggtgc ctaggaacga
     6061 cgtccggcac agcggtaatt ggtagcgacg gtgagcacca gcgatctcga aaaacgaccc
     6121 ctcgccgctc ttcaacggct tgtcatccca ggtcaagtgg ggggccgagg cttcggctcc
     6181 agttggcatc atgggtacga aggccgggta gtcgcctccg aactcctcgg tgcccgatac
     6241 gccggtggcg tagatctcgg ccacgaggtc gcactttcgc atgcccggtt cgatgatgtc
     6301 gcggatccgg gcgtgcatgc gttccacgat ccgggcgccc cgccgcatgt acacgagttc
     6361 ctggtcggac ttgaccccgc gctgccagtt gacgagcgcc gtggcgtcca caacatcggc
     6421 gtcgggcaac ctggcacaca ggttctggtg agcggccgcc gagtagtagt agttgtcgag
     6481 ttcaacgccg acccgggccg aaccatgacc catcccgtcc aagaggtcag ctaactggcc
     6541 gaaagcgtgc ttctcggtcg acatgacatg gtcgtcggag tagtcaagta tccgggactc
     6601 atccatgtag acggtgaggc gggcgccatt ggcgtccata cgtcgtcccc accaccacgg
     6661 ctcgccgtcg tgagtgacca ccacggcctg cggggtatag aacgaccacc cgtcgtagcc
     6721 ggtcagccac gacatgtttg acgggtcggc ggccacaaga acctcgatgc cgtgagcctc
     6781 catagctcta cgcaccttcg ccaggcgctg tgcgtactcc tcacggctaa acggaagctc
     6841 aacatctggc atggtttccc tctcctctcg ggtgtcggcc cggctcggtc attgggctga
     6901 ggttcgcgaa ggctagatcg gacgcgtgcc caccgagggt gggtcatccg gtggcagaac
     6961 gagaacaacc atggccgtcc agaggctgcg gctaatcggg gcgaaagcca acggtgccac
     7021 cagcgaagta gcgaccgtgg gtaccaggac ctcgagcacc tctgggtcgg gccatgccac
     7081 gacgaacgca acgaccaaca cgatcaggat cgccacagtg gacaggacgg tgttaacagc
     7141 cacggcgccg atccagtgac cgtgagtgcg ctcaaagacg agcccacaac tggggcacgc
     7201 ctcacggatc cgcaaccagc cccgacggga cggacggcgg aacaagcccc gtcccccaca
     7261 tcccgggcag gctgccacga tccccctgaa cagaacccgc atccgacctg ctccgtccat
     7321 tatccgaaca tactggcgac ccgacctcac ccaccggtgt ggaacaccgg agcctcggct
     7381 accgtccgcg gccgtgccga tactcaccga cgagcaggtc tcccggtacc ggaacgacgg
     7441 ctggctcgcc ccgatcaacg tacttacgac cgccgaggcc tctgctgccc tagccgccct
     7501 cgaagaggcc gaagcccgat tccccgagga cctgcatggt gaccaccgca acaacgctca
     7561 cctagtcctg ccgttcctgg ccgacctggc cctccacccg acaatcctgg gctgcgttgc
     7621 gtcactcgtg gaccggcccg ctgccctgct caattcagtg ctgttcatca aggacccgga
     7681 tgccacggcc tacgtaagtt ggcatcagga ctccacctac atggggatcg aggggaccga
     7741 catggtcaca gcctggctgg ctctaactcc cagcacgtcg gaaaacggct gcgtggccat
     7801 ggccccggcc acccacctag acggcatccg cccccacgag gaccggtacg ggcaagacaa
     7861 catcctcact cgaggtcagc acgtgagcgg gttcgacccc gacacggctg tcgacgtggt
     7921 gctccagccc ggccagatgt cgctccacca tccacacctg atccacgggt cacggcccaa
     7981 cgaatccgat acccgacggg tgggcgtggc cttccagtcc tacatcggcg tcgacgcccg
     8041 cccggaacga ggtgagcacc acgtgctggt cgtaggcaac gaccccgtgg atccggcgtt
     8101 cctcgtcgtg ccccgaccag aaaccgagat gactgacgac ggccgagcag tccgggcgtc
     8161 ggccaacgcc gccctgtccg atgtgttgta ccacggcgct accgagcgac gctcctactg
     8221 acgccgttcc tcccgatcag cccaccagca cctgagcccg ccacatgaat tcgaacacgt
     8281 cgacacccac cccggcgatg acaagggcag ggtgaaactc aaggttcagt ttcggtatag
     8341 atgctcaata ccaagcgtca tcttcggaac ccttgcgttc ggccatgaac gcctgcaact
     8401 cggaatccgt ccccggatcg atctccggcg gctcgtagtc ggccagcatg cgcttccaga
     8461 gggcgttggc ccgctgctgc atgtcccgcc ccccatcctc ggcccactgc tcgaaggagt
     8521 tggtgtcgag gagtactgag ttgtagttgg cttcctcgaa gtgggccagg gtgtgggcag
     8581 tccccagatg ggccgttccc ggcccagcct cccgataacc ctcaacggcc aacgagtcgt
     8641 cgtcgaccac tagacccccc atgcgtcggg tgagcatccc caggtggtcg gcatccatca
     8701 cgaacttctc gtaaccggtg accagcccgc cctccagcca gccagcggcc tggtgcacga
     8761 agttggcccc agcgtagatg gacgccccca tggcgtcggc cgactccatc atcgcctggg
     8821 cgtcggccac cttggacgcc gtgtagtggc caccgcaacg cagcggcagt cccagccggc
     8881 gcgacagttg gcccatggcg taggtagcca gtaccgcctc gggcgtcccg aacgtcggtg
     8941 ctccgctgcg caggtccatg gtggtcaaaa agctgccgta caccaccggt gaaccagagc
     9001 gcaccagttg ggccagagcg atgcccacca tggtctcagc gtgagcctgg gcgatgagcg
     9061 ccggctgggt gaccggaccc atggcacccc cgatgatgaa cggtgaaatc acgttggcct
     9121 ggttggcccg ggcataggtc ttgagcgccc cggtcatcac gtcgtcgaac accagcggcg
     9181 aattgacatt gatgttcccc tggacaacgc agtcccgttc gaggcggtcg gctccgaaga
     9241 cgatgcgggc catggcgaca gagtcctcgg cccgctccgg cgccgtcacc gcacccatga
     9301 acggcttggt cgaccagcgc aggtgggcgt acaccatgtc caggtgccgc ttattgacag
     9361 gaacgtccac tggctcgcac accgtgccac ctgagtgctg cagccacggc gacacgtagg
     9421 ccagcttcac taggttctcg aagtcgacca gcgtggcgta gcgccggccg tcgtcgaggt
     9481 ccgacacgaa cggtgacccg taggccggtg agaagacgac gtggtcgcca ccgacggtga
     9541 ccgtatggcg ttcatcgcgc ccgtgcatgg cgaactcggc cggcgccgtg gtgcacaggc
     9601 tccgggccag gcctggatcg aaccgcaccc gctccccctc gacgcgggca cccaccgccc
     9661 ggaacagttc gacagcctcc tcgtcccccc ggatttcgat gccgatctca tcgaggatcc
     9721 agtcggcgtg ggcctcgagg cggtccagcg acccctcgtc gagcaggtcg taggtgggga
     9781 tgcgccggcg aggttgcagc accccggcga ccgattcagt cgcccgtgca gcagcgcgcg
     9841 caccccggcc tcctcgacgg cgctcaccga tcatcgacag ccccacatct cagacgaccc
     9901 cacttcagac gatcgcttca gacagtttcg gtacggtaat cgcttcgaag gcttcgggtt
     9961 cacgatcgga gccggtcgtc gactgccacc ggtcgacgta ccgtcaccct cgccccggat
    10021 ctactaccga ggcctcctgc tgggtgaaga acgacgctcc cgtcggcggt tcaggcaggt
    10081 ccatctcgaa gtccccggtc cggacccgac cggggtccga accccgtacg aacaatccct
    10141 gatgggccgt gggcaccgga ttggggccat acggcacggc atcgcccgcc ccgtagacac
    10201 agatgaacag ggtccgggac cgatccgacc ggttgggggc cgaggcgtgg gccaaccggg
    10261 tgtgcatcag acacaccgaa cccgccgggc ctgtgcacga tacggcagca tcacgcatcg
    10321 cagcgacggc gtctggacag atggcgcccg tgaaaacccc gtcgtgccac agcgagtgaa
    10381 tcgggccgtt gtgcgaacca ggagccactt ccaaggggcc gttctccaca gtcacctcgt
    10441 cgaccatcag cagggcggtc atcaggtcag cgttggagtg cggggtgaac gggaagtcct
    10501 ggtgccactg cacctcggtg gccgcccccg ggagtttggt gttgaccttg gtgtggtgga
    10561 gccggacgtc gggaccgatc aagtcagcca ccatgtcgac catggcgctg ttggccatga
    10621 cctcgcggtg ggcggctgag acctccgtgg gcgccgagac ccgccgcaac gccggccggt
    10681 ccttcgaatg acccggctgc acgtcgaacc gggggcgccc gtcgatcgtc tccccgtagg
    10741 gcccggtgtg ggcccgactc tcctcgaccc agcggtccat gtcggcgcgc agtgctgcca
    10801 gttgatccgg cgtgactgcg ttgggaaccg tcaagactcc atcgcgccgg aacgtttcga
    10861 cctgttcgtc ggtcagcacc ggtatcgact caccggtcgc cggccacgcc gtagctgggc
    10921 gccacccccg gatctacggc ccggtccaag tagggctgca tctggggttc gtaatcggtc
    10981 cacagacggc gcagcacgac cactgggtcg tcttcgttcc aatcgcaacg caggtcgacc
    11041 agtgcgaagg gttgctcgtg gtggaccaga agggctgctg agcgaactgg accctcctct
    11101 ccaccagcgg ctagcccggc ctccaggcca agtagcaggc ggtcggccag gtgggcgcca
    11161 gggtcggcct cgaagccggc caccatggcg gcaggaacct ccggtgtcga cagcagattg
    11221 cccgctgcga tgcagtggtc accctccacg acgcggttgg tgcccaagat gtgggccccg
    11281 gtgaagtgtc cagtccgacc ggccatgtcg accaccgcca gttgtcggta ttcggcgttg
    11341 gctcgaccgt ccatgacggt ggccaccgcc tcggcggccg tttcaccggc ctgtaggcac
    11401 tcgaacacac gggtggccag agtcgggtcg gtgatgttct gggtagccac ggcgcccacg
    11461 ccggctctgg catgggggca acgcgacccc acacagatgg acgaggtagt gatagccacc
    11521 ccggccatac cggtcctggc acagtgtccg gtgatggaga aggtcatggt gggctcccgg
    11581 gtcgggggtc agtcggtgga cgtcaagcgg tcggccagat agcccatgaa gtggtggagt
    11641 tcatgctcga gccaactcag cggaccaggt gtggccagcg gcgagcggga tccgacgtgg
    11701 atgccctcca ccaccttgcg gtcttcctcg cagaccgcgg tgaagaagtc gaccatctcg
    11761 gtgatccacg cttcgggttc gaccagcgag gcgtgcactt cgggcgctag ggcaatccca
    11821 aaccgcagct cgacctgacc ggttccccgg ggtcgtagcg ataggtacca gaggtggtcg
    11881 ggggcgagga tgtacatgtg ggcggggaac accgtcggca tgaacgtggt gctccgccac
    11941 gccccctcca gtcggtcgtt gtccggatgg gcgcgcccat acacggcgtt ctcgtccttc
    12001 tcgaacatct ggtacgtgaa cgctccgtgg ctctcgtcgg ggaacaccac cgagtccatg
    12061 ggcatccagg ttccgagcgt gacccggtgg gtgacaggca ggtggtagcc ctccatgaag
    12121 ttctcagtaa ggaacttcca gttaccgtcc cacacctcgt ccacccggtg gatcggcacg
    12181 tagtcggcta ccccgtaggg cgccacgaag ccctcgatgg gagccagcag atcggccacc
    12241 gacggggcat cgtcgtccag agtgcagtag atccacccct cccagagttc ggtgcggatc
    12301 tcgggcagac agatgtccac ccggtcgaat ccgtcggtgc gctccatgtg gtttgtcccc
    12361 actagttgcc cacctaggtc gtatgtccac gaatggtacg ggcaggtaat ccggcgggaa
    12421 ttcccgtcgc cggccaccaa ggtcatcatc cggtgccggc acacgttgga aaacgtccgg
    12481 acccgatcat caccgtcgcg gacgcagaac accggctggt cggcgatcga ccagaccagg
    12541 tggtcgccca cctcgggg
//
LOCUS       DASCMR010000068         2436 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000360471, whole genome shotgun sequence.
ACCESSION   DASCMR010000068 DASCMR010000000
VERSION     DASCMR010000068.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2436)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2436)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2436
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000360471"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..499
                     /locus_tag="QGG16_01720"
     CDS             <1..499
                     /locus_tag="QGG16_01720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HJP24024.1"
                     /translation="ARRGGGPAYLRSTADGLPFSEGSFDAVVACLVFEHIEAVDEAVA
                     EVARVLADGGRFAFFLNHPLIQTPGSGWVDDQIMDPPEQYWRIGPYLVESIESEEVAK
                     DVFLPFVHRPVSRYVNAMADHGLVLRRMHEPTPPEGFLERAAEYREAATIPRLLVLVA
                     ERERR"
     gene            570..1415
                     /gene="rapZ"
                     /locus_tag="QGG16_01725"
     CDS             570..1415
                     /gene="rapZ"
                     /locus_tag="QGG16_01725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HJP24025.1"
                     /translation="MSDLLVITGLSGAGRSEFAKDLEDLGWFVIDRLPPDIATKVADL
                     AVGPTAPWDRVAFALRADVTGGETLRAVSELRDSGERLRVVFLDCSTETLVRRYESSR
                     RPHPSPAAGLEEAIEGERALMEPVRAAADLVLDTSDLNVHELRDRVARLYGESDDRPM
                     RTTITSFGYKHGLPRDADLILDCRFLPNPHWIPELRPLTGLDGPVREHVLSHEVTQEF
                     LDQMGDLLGMLMPAYVAEGKSYLSIALGCTGGRHRSVAVAETVAEMLRGREFDPVVTH
                     RDIGR"
     gene            1412..2281
                     /locus_tag="QGG16_01730"
     CDS             1412..2281
                     /locus_tag="QGG16_01730"
                     /inference="COORDINATES: protein motif:HMM:NF014042.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconeogenesis factor YvcK family protein"
                     /protein_id="HJP24026.1"
                     /translation="MSELQSASVGVCALGGGHGLATSLRAVRSYADHVTAVVSIADDG
                     GSSGRIRSAMGGPAPGDLRRCFEALGDASMLTAEMGWRFDGGELAGHALGNLVIAGLV
                     AASDDLVSALDEVGRLVGAVGRVLPATSVPVDLVADTGEWEVEGQVAVHRAVGVVGLR
                     LSPIDATAPPETVSAIEDADQIVLGPGSFFTSVLAATLSADVQGALARRSGPLVLVAN
                     LAQDREGPVELADHLRLLDEHGVRPDVLLVDDHSDRTLPIGPEVVRAPLAGRDGRVHD
                     PVQLGSALASCLG"
BASE COUNT          359 a          730 c          864 g          483 t
ORIGIN      
        1 ggctcgccgt gggggagggc ctgcctacct gcgatcgacg gccgacggtc tgccgttcag
       61 tgaggggtcg ttcgatgcgg tggtggcctg cttggtgttc gagcacatcg aggcggttga
      121 cgaggcggtg gccgaggtgg cccgagtgct ggctgacgga ggccgcttcg ccttcttcct
      181 gaaccacccg ctgatccaga cgccggggag cggctgggtg gacgatcaga ttatggatcc
      241 gccggagcag tactggagga tcggccccta cctcgtggag tcgatcgagt ccgaggaggt
      301 ggccaaggac gtcttcctcc cgtttgtcca ccgaccggtt agtcggtacg tgaacgccat
      361 ggccgaccat ggcctcgtcc tgcggcggat gcatgaacct acgccgcccg agggatttct
      421 ggagcgggct gccgagtacc gggaggcggc aaccattccg cgcctactcg tcctggtggc
      481 agaacgcgaa agacgctgac ctgttcgccg gcccatggtt tgactcgccg ggccgatagc
      541 tcagtgggcg tcccgtctag cattggccca tgagcgacct cttggtcatc actggcctgt
      601 cgggcgccgg acgtagtgag ttcgccaagg atctcgagga tctcggctgg ttcgttatcg
      661 atcgccttcc gcccgatatc gccaccaagg tggctgatct ggccgtggga ccgaccgcgc
      721 cgtgggaccg tgttgccttc gccctgaggg ccgacgtgac tgggggtgag actttgcggg
      781 ccgtgtccga actacgggac agtggcgaac ggcttcgggt ggtgttcctt gattgttcga
      841 cggagaccct ggtgcgccgg tatgagtcga gtcgtcgacc gcacccgtcg ccggccgccg
      901 gtctagaaga ggccatcgag ggcgaacggg cacttatgga accggtccgg gccgcggcgg
      961 acctcgtcct ggatacctcg gacctcaatg ttcacgaact tcgggatcgg gtcgcccgcc
     1021 tgtacggcga gtccgacgat cggcccatgc gtacgaccat cacctcgttt ggctacaagc
     1081 acggcctgcc tcgtgatgcc gatctcatcc tggattgccg gttcctcccc aaccctcact
     1141 ggatcccgga actgcgacct ctgactggac tggatggacc ggtgagggag cacgttctga
     1201 gccacgaagt aacccaggag tttctggacc agatgggtga cctcctgggc atgttgatgc
     1261 cggcttacgt cgctgagggc aagtcgtacc tctcaatcgc cttgggatgc accggtggcc
     1321 gccaccgatc ggtggctgtg gccgaaactg ttgccgagat gctccggggt cgggaattcg
     1381 atccggtggt gacccatcgc gacatcggac ggtgagtgaa ctgcagtctg cgtcggtcgg
     1441 ggtctgtgcg ttgggtggcg ggcatggact ggccaccagt ctccgggccg tgcggagcta
     1501 cgcggaccat gtcacggcgg tggtgtccat tgccgacgac ggtggttcta gcggtcggat
     1561 ccgttcggcc atgggcgggc cggcgcctgg tgacctccgg cgatgctttg aggctctcgg
     1621 ggatgcgtca atgttgaccg ctgagatggg atggcgattc gacggcggcg agctcgcagg
     1681 tcatgcgttg ggcaacctgg tcatcgccgg tctagttgcc gcatccgatg acctggtgtc
     1741 ggcgctcgat gaggtgggcc gcctggttgg cgctgttggc cgggtgctac ccgcgacgtc
     1801 ggtccccgtg gatctggtgg ccgataccgg ggagtgggag gtggagggtc aggtggccgt
     1861 ccaccgggcg gttggcgtgg tgggccttcg actatcgccg atcgatgcca ctgcaccccc
     1921 ggagacggtg tcagccattg aggacgctga ccagatcgtg ctcggccccg gatcgttctt
     1981 caccagcgtt ctagccgcca cgttgtccgc cgacgtccag ggcgcccttg cccgccgatc
     2041 gggcccgttg gtgctggtgg cgaacctcgc tcaggaccgt gaggggcccg tcgaactagc
     2101 cgaccacctt cgtctactgg atgaacacgg cgttcggccc gacgtcctcc tcgtggacga
     2161 ccactcagac cggacgctac cgatcggtcc cgaggtggtc cgggcgccgt tggcgggtcg
     2221 ggatggacgg gtccacgacc cggtccagct gggatccgct cttgcatcct gtctgggttg
     2281 acgcgacagc agcgaatacg ggggggggtc ggtgcgagtg gtgggcgaac ttatgacggt
     2341 tttcctggcc gggacgcgtc gcgcggcagc ctgaatcggc tatcaataca gggtccggaa
     2401 tttcatcgaa agatggtgcc gggttcgatt cgtaga
//
LOCUS       DASCMR010000069         3635 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000363102, whole genome shotgun sequence.
ACCESSION   DASCMR010000069 DASCMR010000000
VERSION     DASCMR010000069.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3635)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3635)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3635
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000363102"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1756
                     /locus_tag="QGG16_01735"
     CDS             <1..1756
                     /locus_tag="QGG16_01735"
                     /inference="COORDINATES: protein motif:HMM:NF042649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HJP24027.1"
                     /translation="VFVESDGPSNMASVNSLERGDVDAAFEAADLIVEREFETAWVHQ
                     GYIEPHACVVDVGRDGKADIWVSSQGHFRVRSQTAAVLGWDTARVKVTPAEIGGGFGG
                     KTTIYLEPVAARLSEKSGRPVKIVMSREEVLRATGPAPASKARVRIAATNDGELTAIE
                     GWLGYAVGCTSDMAGVVGAMSVASYKFPNLKLEATASLTNTPKSAAYRAPSAPQAAFA
                     IESVIDEIAQQMDMDPIELRLKNAVVEGDPTAMGMPHPRIGFVECLEAIRESDHYRSP
                     VPEGAARGVGAGFWFNIGEQSSATVNLNEDGTATVITGSPDIGGSRASMALMAAEELG
                     IDVHCITPVVADTESVGFTDVTEGSRATFATGMAVVNACRELIDELKARAATILGVDA
                     DAVDWLDGEAVADGKDPLSLAAITAKAKSTGGPLTVTASLNAGGAGPSFAVHCCDLAV
                     DEETGQVTILGYTAAQDAGTAIHPSYVEGQMQGGTVQGIGWALNEEYIYDDEGSMQNA
                     SFLDYRVPVASDLPMIGTIIVEVPNPAHPYGVRGVGETGIVPPMATIANAISRATSVR
                     MTSLPMSPPKLLAALDDR"
     gene            1767..2012
                     /locus_tag="QGG16_01740"
     CDS             1767..2012
                     /locus_tag="QGG16_01740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24028.1"
                     /translation="MPRAHLMSDHRRFTGGEAVIEVEGATVGAVIAELERRYPGLGNI
                     LTKASSAGVDGVIHAEPEYLAISPDTDVYFVAPLTGG"
     gene            complement(1999..>3635)
                     /locus_tag="QGG16_01745"
     CDS             complement(1999..>3635)
                     /locus_tag="QGG16_01745"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJP24029.1"
                     /translation="MAPIGRVDASGDRRAAISTSTPRACGPVGRIARTVVVHELDDEG
                     LVELRTARDDLIRERVTGTDHFVIDHGPFTHWDRRLVVDSTTNGRHRVVETIEYRAAV
                     GPWRPLFSWPLRRAVARRRTPWWAPPDRLDTRSATVLSLLACIQVVDGYLGTVITQTI
                     TFASDEFGRSDTAQGIALAVVRLGIVVALAVVFLADRKGRRSVLVVTAVAAVLATGLG
                     AASTDLWFLGGSQLIARGLTTGMGILIGVFAAEELPRGSRAYGVSVLVLCAALGAGMA
                     VWVLPVADLDPRAWRAVYLVPLLAIPALLAVGRRLPESLRFTANSVDRRSRDGRVPDA
                     SDGGRRRTEGRRLVLLAVASFLLLVFAAPASQFQNDFLKDHRGYSAVGITLFTLLTST
                     PAGIGIFVAGRLADTRGRRPVGAIGLLGGTAFMVVAYHSTGAALWASSVVGTVIGSLT
                     VALGVYGPELFSTRNRARANGLVVTLGVAGSAAGLIIVGMLSDRFGSYGPAFLVVAVG
                     PVLAAALVLGWFPETARVELESLNPGDAPPEEINRQ"
BASE COUNT          628 a         1216 c         1238 g          553 t
ORIGIN      
        1 cgtgttcgtc gaaagtgatg ggccgtccaa catggcctcg gtcaactccc tcgagcgtgg
       61 cgatgtcgac gcggccttcg aggccgccga cctgattgtc gagcgcgagt tcgagacagc
      121 gtgggtccat cagggctaca tcgagcccca cgcctgcgtg gtcgacgtcg ggcgggacgg
      181 caaggcggac atctgggtgt cgtcccaagg ccacttccgt gtccggtccc agaccgccgc
      241 ggtgctcggt tgggacacag cccgcgtcaa ggtgaccccg gccgagatcg gcggtgggtt
      301 cggtggaaag accacgatct acctcgagcc ggtcgccgcc cgactgtccg agaagtcggg
      361 ccgtccggtg aagatcgtga tgagccgcga ggaggtgctg agggccaccg gtccggcacc
      421 ggcatccaag gccagagtcc ggatcgcggc caccaacgac ggtgagctca cggccatcga
      481 gggctggttg gggtacgccg tggggtgcac cagcgacatg gccggcgttg tcggcgccat
      541 gtcggtggct tcctacaagt tccccaatct gaagcttgag gccaccgcct cgctcaccaa
      601 cacacccaag tcagctgcct accgggcacc gtcggcgccc caggcggcgt tcgccatcga
      661 gtcggtcatc gacgagatcg cccagcagat ggacatggac ccaatcgaac tgcggctcaa
      721 gaacgccgtg gtcgaaggtg accccacggc catgggcatg ccccatcccc ggatcggttt
      781 cgtggagtgc ctcgaggcca tccgcgaaag cgaccactac cgttcgccgg taccggaggg
      841 cgcggcccga ggcgtcggcg cgggcttctg gttcaacatc ggtgagcagt ccagcgccac
      901 ggtcaacctc aacgaagacg gcacggccac ggtgatcacc ggcagtcccg acatcggtgg
      961 gagccgtgca tcgatggcgc tgatggccgc cgaggagttg ggcatagatg tccactgcat
     1021 cacccctgtg gtggccgaca ccgaatccgt tggtttcacc gacgtgaccg agggcagtcg
     1081 ggcgaccttc gctaccggca tggccgtcgt caacgcctgt cgcgaactca ttgacgagct
     1141 caaggcccgg gcggccacca tcctcggtgt cgacgctgac gcggtcgact ggcttgacgg
     1201 cgaggccgtg gccgacggca aagatccatt gtcgctggcc gccatcaccg ccaaggccaa
     1261 gagcaccggt ggtcccctca cggtgactgc atcactcaac gccggtggcg ccggcccgtc
     1321 cttcgcagtg cattgctgtg acctcgctgt cgacgaggag accggacagg tcaccatcct
     1381 cggatacacc gcagcccagg acgcggggac ggcgatccac ccgagttacg tcgagggtca
     1441 gatgcagggc ggaacggtcc agggaatcgg ctgggcgttg aacgaggagt acatctacga
     1501 cgacgagggc tccatgcaga acgccagctt cctcgactac cgggttccgg tggcgtccga
     1561 tctgccgatg atcgggacga tcatcgtcga ggttccgaac cccgctcatc cctacggggt
     1621 tcgtggtgtg ggcgagacgg gcatcgtccc accgatggcc accatcgcca acgccatcag
     1681 ccgcgccacg tcggtgcgga tgacctcgct tcccatgtct ccgcccaagc ttctggcggc
     1741 cctcgacgac cgctgagggt gtcgggatgc cccgagccca tctgatgtcg gaccatcgtc
     1801 gcttcaccgg cggcgaggct gtcatcgagg ttgaaggggc cacggtcggt gcggtgatcg
     1861 ctgaactcga gcgtcgctat ccgggcctcg gcaacatcct caccaaggcc tcctcggccg
     1921 gggtggacgg ggtgattcac gccgagccgg agtacctcgc tatttccccg gacaccgacg
     1981 tctacttcgt ggcgcctctc actggcggtt gatttcctcc ggtggtgcat cgcctgggtt
     2041 gagggactcg agttcgaccc gggccgtctc cgggaaccag cccaacacca gtgcggcagc
     2101 gaggacggga ccgacggcca ccacgaggaa cgccggcccg taggacccga accggtcgct
     2161 gagcatcccg acgatgatca ggccggcagc gctgccggcc accccgagag tcacgaccag
     2221 accgttggcc cgggcccgat tacgggttga gaacagttcc ggcccgtaga cgcccagggc
     2281 gacggtcaac gatccgatca ctgttcccac cacgctgctg gcccacaggg cggcaccggt
     2341 cgagtggtag gccaccacca tgaaggcggt gccgccgagg aggccgatgg cgcctactgg
     2401 ccgtcgacca cgagtatcgg ccagtcgacc ggccacgaag attccgatgc cggccggtgt
     2461 gctcgtgagc agcgtgaaca gggtgatgcc gactgccgag tatcccctgt ggtccttgag
     2521 gaagtcgttc tggaactggc tggctggagc ggcgaacacc aacagcagga acgatgccac
     2581 ggctagcagc accaggcgtc gcccttcagt ccgtcgtcgg cctccatctg atgcatcagg
     2641 tacccggccg tcgcgggacc ggcggtcgac ggagttggcg gtgaaccgga gcgactcggg
     2701 gaggcggcga ccgacggcca gcagcgccgg gatggccagc agtgggacga ggtatacggc
     2761 ccgccacgcc ctcgggtcga ggtcggccac cggaaggacc cagacggcca tgccggcgcc
     2821 cagcgcggca cagagcacca gcacgctgac cccgtaggcc cgggatcctc ggggaagttc
     2881 ctcggcggcg aacaccccga tgaggatgcc catgcccgtg gtgagccccc gggctatcag
     2941 ttggctgcca cccagaaacc agaggtcagt cgaggccgca cccagtccag tggccaggac
     3001 cgcggccacc gcagtgacta ctaggacgga ccggcgaccc ttccggtcgg cgaggaacac
     3061 tacggcgagg gctaccacga ttcccagacg gaccacggcc agagcgattc cctgggcggt
     3121 gtcgcttcgt ccgaactcgt cgctggcgaa ggtgatggtc tgggtgatga ccgtgcccag
     3181 atagccgtcg actacctgga tgcacgccag cagcgagagc accgtggcgg accgggtgtc
     3241 gagacggtcc ggcggcgccc accagggggt ccggcggcgg gccacggcgc gacggagggg
     3301 ccaggagaac agtggtcgcc agggtccgac ggccgcccgg tactcaatgg tctcgacgac
     3361 ccggtgccgc ccgttggtcg tactgtcgac cacgagtcga cggtcccagt gtgtgaaggg
     3421 cccgtgatcg atgacgaagt ggtcggtgcc ggtgacgcgt tcgcggatca ggtcgtcgcg
     3481 ggcggtacgg agttccacga ggccctcgtc gtccaactcg tggaccacca ccgtcctggc
     3541 gatccggccg actggcccac aagcgcgggg cgtgctggtg ctgatggctg ccctccggtc
     3601 gcccgaagca tccaccctac cgatgggggc catac
//
LOCUS       DASCMR010000070         3136 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000373038, whole genome shotgun sequence.
ACCESSION   DASCMR010000070 DASCMR010000000
VERSION     DASCMR010000070.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3136)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3136)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3136
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000373038"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..2636
                     /locus_tag="QGG16_01750"
     CDS             <1..2636
                     /locus_tag="QGG16_01750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24030.1"
                     /translation="TSGFTASYLTRAIDVSEAGSTLDLSVGLDAKPTADVAISMTGHD
                     ASEIQPGVAITFTPANWNVAQTFTVTGVDDDLDDGDQNATASLEASSTDSAYDGLDRM
                     VFFTTTDDDTAGITLTGTSVTVSEAGTTGSVSVVLESQPTADVTFTISGSDASEASVD
                     PTVLTFTTVNWKVAQDVTIAGIDDVVTDGPQASTVTLSPASSDSAYDAMADLVVDVTT
                     TDDDTAGVTVSQDGGSTVVSEAGTTDVVSVVLNTQPTSDVTITVALSGSDEASSDVAE
                     LTFTDTNWNTAQTVTVTGIDDDVDDGDQDTTMTFSVSGALAYAALADQSVTISTLDDE
                     TSGFTVSALVATVSESGTTESFQVVLDSQPTGTVVISVTASDPSEASVAPTVLTFTTV
                     NWRFAQDVTVTGMDDIEDDGDVTSTITLTVVDAASAAEFAPVADVTLPVVTVDDDEPT
                     VDEPTVDEPTVDEPTVEDPDVVDTDTIDMTGNALCSAAQVTWAPDVAGEIVSFVLASR
                     APGDRIPSISEHSASTDQVTVEGLVDGTHSFEVLIRMADGSVVLGDEINVTVSSCNLT
                     PDPDPELDETPELDETPELDETPELDETPELDETPEVEVESNLEDDDEPTPEDDDEGG
                     DSDEGNVGLVPGPSPAPGGGEGPGNGTSPEASNTSPGTSGTGTDGSTDGTTGGPGTNN
                     GIIPEGPVTTSKAINLTDVGNADGGSTEGQGSDFSEGSRSPINSSVLASAAGLAAAAG
                     LGLTGIGSRIGAGLLRFLAGSSVGLFLIGLFRRDRRPGQPENFVIFPAGPVTTLEWTA
                     PATGKAPDRYIAEGLVRGTWREMFEFDTAVCRAGVPASEVDGIYNWRLRAANEHGVGK
                     PSEGAILAHAVDEAVELPLAA"
     gene            2885..>3136
                     /locus_tag="QGG16_01755"
     CDS             2885..>3136
                     /locus_tag="QGG16_01755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24031.1"
                     /translation="MTPIRTTLATVLIALLFAASCSDEDLTWEDPIVKQAPCDPELES
                     CLGIPVEDIPVEDIPVVDIPVEDIPVEDMGWRPGSDDSPR"
BASE COUNT          595 a         1129 c          920 g          492 t
ORIGIN      
        1 acacctccgg attcaccgcc tcctacctga cgagggccat cgacgtgtcc gaagcaggtt
       61 cgacgttgga cctgtccgtc ggcctcgacg ccaagccgac cgctgacgtg gccatctcga
      121 tgacgggcca cgacgcctcc gagatccagc ctggtgtggc gatcacgttc accccggcca
      181 actggaacgt cgcccagacg ttcacggtca ccggcgtcga cgacgacctc gacgacggag
      241 accagaacgc cactgcatcc ctggaggcgt cgagcaccga cagtgcctac gacggcctgg
      301 accggatggt cttcttcacc accaccgacg acgacaccgc cggcatcacc ctgacgggca
      361 cctcggtcac cgtgtccgag gccggcacca ccggttcggt cagcgtggtc ctcgaatcgc
      421 agcccaccgc tgacgtgacc ttcaccattt ctggttccga cgcatctgag gcctccgtgg
      481 acccgacagt cctcacgttc acgaccgtca actggaaggt tgcccaggac gtcaccattg
      541 ccggtatcga cgacgtggta accgacggcc cgcaggcctc caccgtcacc ctctcgccag
      601 ccagctccga cagcgcctat gacgcaatgg ctgacctggt ggtcgacgtg acgaccaccg
      661 acgacgacac cgctggcgtc accgtctccc aggacggcgg ctcgaccgtg gtctctgagg
      721 ccggcaccac cgacgtggtg tctgtggtgc tcaacaccca gccgacgtcg gacgtgacca
      781 tcaccgtggc cctttcaggc tccgacgagg catcatctga cgtcgcagag ctgacgttca
      841 cagacaccaa ctggaacacc gctcagaccg tgacggtcac cgggatcgac gacgacgtcg
      901 acgatggaga ccaggacacg acgatgacct tctcggtttc cggcgctctc gcctacgccg
      961 ccttggctga ccagtccgtg acgatctcca cgctcgacga cgagacctcc ggattcaccg
     1021 tctcggccct ggttgccacc gtgtccgagt ccgggacgac ggagtccttc caggtcgtgc
     1081 tcgattcaca gccgaccggc acggtcgtta tcagcgtgac cgcatcggat ccgtccgagg
     1141 cctccgtggc cccgacagtc ctcacgttca cgaccgtcaa ctggcgtttc gcccaggacg
     1201 tcaccgtcac cggcatggac gacatcgagg atgacggcga tgtcacttcg acgatcaccc
     1261 tgaccgtcgt ggatgccgct tcagccgccg agttcgcacc ggtggccgac gtaaccctcc
     1321 cggtagtcac cgtcgacgac gatgagccca ccgtcgatga gcccaccgtc gatgagccca
     1381 ccgtcgatga gcccaccgtc gaagatcctg acgtcgtgga taccgacacc atcgacatga
     1441 ctgggaacgc cctgtgttcc gcagctcagg tgacctgggc cccggacgtg gctggcgaga
     1501 tcgtgtcatt cgtcctggct tccagggcac cgggcgaccg catcccctcc atcagcgagc
     1561 acagcgcatc aactgatcag gtaaccgtcg aagggctcgt agacggcacg cactcctttg
     1621 aggtcttgat caggatggcc gacggttccg tcgtgctggg cgacgagatc aatgtcactg
     1681 tgtcctcctg caacctgacc cccgaccctg accctgagct cgacgagacc cctgagctcg
     1741 acgagacccc tgagctcgac gagacccctg agctcgacga gacccctgag ctcgacgaga
     1801 cccctgaggt tgaagttgag tccaacctcg aggacgacga cgagcccacc cccgaggacg
     1861 acgacgaagg tggtgacagc gatgagggca acgtcggctt ggtccctggt ccctccccag
     1921 ccccaggtgg gggagagggc ccgggcaacg gcaccagccc ggaagccagc aacacctcac
     1981 cgggcaccag cggtacgggt accgacggat ccacggacgg cacgacaggc ggacccggaa
     2041 ccaacaacgg catcatcccg gaaggcccgg tgacgacgtc caaggccatc aacctgaccg
     2101 acgttggaaa cgccgacggt gggagcaccg agggacaggg cagcgacttc agtgagggct
     2161 cccgtagccc gatcaactcc agcgtcctag ccagcgcagc cggcctcgcc gccgcagccg
     2221 gcctgggact caccggaatc ggctcgagga tcggtgcagg cctcctgcgg ttcctagcgg
     2281 gctccagtgt cggcctgttc ctcatcgggc tgttccgcag ggaccgccgc cccggccaac
     2341 ccgagaactt cgtgatcttc ccggcagggc cggtaaccac cctggaatgg actgcccccg
     2401 cgactggcaa ggccccggac cgctacatcg cagaggggct cgtcagaggg acctggcgtg
     2461 agatgttcga gttcgatacg gctgtatgcc gggccggtgt gccagccagc gaggtcgacg
     2521 gaatctacaa ctggaggctc cgggcagcca acgagcacgg ggtcggcaag ccatccgaag
     2581 gtgcgatcct cgcccacgcc gtcgacgagg ccgtagagct tccgttggcc gcctgaccaa
     2641 tgaaccttct caccaccacc gcagtcacag cagcgaccct gctgctgtgg cccgtgaccg
     2701 catggtcgct gatcatcgct gttggactgc tgtactccag tgcacgccgg gcctacatgg
     2761 ggacctcccg acgagcgccg cgacgccact gccccacata cccggcaacc cacggcgggc
     2821 tacgaccgca gtagcgcccc cacccattac ccgaccgacc acccccccag aacccggaaa
     2881 taccgtgacg cccatcagaa caaccctcgc caccgtcctc atagccctac tgttcgccgc
     2941 ttcctgctcg gacgaggacc tcacctggga agaccccatc gtcaagcagg ccccgtgcga
     3001 cccggagttg gagagctgcc tgggcatccc tgttgaagac atccctgttg aagacatccc
     3061 tgttgtagac atccctgttg aagacatccc tgttgaagac atgggttggc gtccagggtc
     3121 ggacgactcg ccgagg
//
LOCUS       DASCMR010000071         3387 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000374307, whole genome shotgun sequence.
ACCESSION   DASCMR010000071 DASCMR010000000
VERSION     DASCMR010000071.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3387)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3387)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3387
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000374307"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1059
                     /locus_tag="QGG16_01760"
     CDS             <1..1059
                     /locus_tag="QGG16_01760"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: protein motif:HMM:NF015047.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HJP24032.1"
                     /translation="PIFSAGMGPIAGPELVAAVSNAGGLGVLGCTSMAPEQVRTVIRR
                     TRELTDRPFGVDLILPARIEQDGTKISDVAERIPIEHRETAARIATELGVEQPGGSAN
                     RGTGRNALGTDAEAQVQVILEEGVPVFVGALGSPGFVVDRFHEAGAVVMSVVGNTKQA
                     VSVVKDGADVVIAQGTEGGGHTGHVGTLALLPQVLDAVEVPVVAAGGIGDGRGLAAAL
                     VMGCEAVWVGTRFLATEEAGIAGWQKDGLVDAADQSPVISRAYTGKRFRLLPNQWTKA
                     WEAADLDPLPMPLQPVLTELTLGPWATDRGGKEGISMNGAGNIVGLVRDVVPAAEVVH
                     QMIADATARLDGFRPPAA"
     gene            1125..1197
                     /locus_tag="QGG16_01765"
     tRNA            1125..1197
                     /locus_tag="QGG16_01765"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1158..1160,aa:Lys,seq:ttt)
     gene            complement(1202..2191)
                     /locus_tag="QGG16_01770"
     CDS             complement(1202..2191)
                     /locus_tag="QGG16_01770"
                     /inference="COORDINATES: protein motif:HMM:NF013126.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 N-terminal
                     domain-containing protein"
                     /protein_id="HJP24033.1"
                     /translation="MGGLPVGLRIGQVLLPIASQAELPVVVDLAGRGLVAGVVMAGPV
                     GDGFSAAVAAVQAASATGPVVVAVDEEGGRVQRFESVLGSMPSAAAMGALPVDEVRAL
                     ARDRAEALRALGVTVNLAPVLDVGAAPGIGDRSFSDDPEVVSTHGIAFAEGVLAGGLV
                     PVVKHFPGHGRANADSHDELTTTPALEDLWEVDLLPFALVPDGAAVMVGHLVVPGLTD
                     GVPATLSPSAITGVLRGDLAFDGVVVTDDLAMGAVADLVDVATAARLALIAGADLLII
                     GGLANVVPVAWGLLSALDDGSLDERWLDEAVERVLALRNVNPCTLAGSVHDGG"
     gene            2232..2531
                     /locus_tag="QGG16_01775"
     CDS             2232..2531
                     /locus_tag="QGG16_01775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24034.1"
                     /translation="MVVAIVDGGVVGGVTTVVVGTVTDTTNVVVTDTEVVEGGATSGA
                     VVEGGATSDEVPQPPAINANIRASDTSGILGRQSTPKPCRIRPVDHRSDPAGPRV"
     gene            2582..3307
                     /locus_tag="QGG16_01780"
     CDS             2582..3307
                     /locus_tag="QGG16_01780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24035.1"
                     /translation="MRTLVVMLLAGITVMAVLFFGLGGNPTDEIVILPVASTTLAPAT
                     TPTTDAANMSDSDTLIAVTTTVGMVEATLPTEPMGTLAPVEGLGVPTLNAASSVSTVG
                     IDRVMFGMTLHDAQVAAGSQFTPITPVGHCFLVVPEAGQAGLTFWVVAGTVERVDVDT
                     RTITTRSGAGIGDTEDRIRELFGERIHTTALPDGSGNLLAYVPKDVADATYRVMFLSN
                     GLQITRVWAGRLPWAEEIGGCPG"
BASE COUNT          616 a         1173 c         1067 g          531 t
ORIGIN      
        1 ccaatcttct cggccggaat gggaccgatc gccggacccg aactcgtggc ggcggtatcc
       61 aacgcaggtg ggcttggagt gcttggttgc acctcgatgg ccccggaaca ggtacggacc
      121 gtcatccgcc gcacccgaga actgaccgat cgaccgttcg gcgtcgacct catcttgccg
      181 gcccgtatcg aacaggacgg aacgaagatc tcagatgttg ctgagcggat tcccattgag
      241 caccgcgaga cggcggcccg tattgccacc gaactgggtg tcgagcagcc aggtggaagt
      301 gccaatcgtg gaaccggtag aaacgcgttg gggaccgatg ccgaggccca agtccaggtc
      361 atcttggagg aaggggtccc ggtattcgtc ggtgccctcg gctcaccagg ttttgtagtg
      421 gaccgcttcc acgaagccgg agcagtggtg atgtcggtgg tcggcaacac gaaacaggct
      481 gtcagcgtcg taaaggacgg tgccgacgtc gtcatcgcac aaggcacgga aggtggtggc
      541 cataccggac acgtcggcac tctcgccctt cttccccagg tgctcgatgc tgtcgaagtt
      601 cccgtcgttg ccgctggcgg gatcggtgat ggtcgcggcc tggcggctgc ccttgtcatg
      661 ggttgtgaag ccgtgtgggt aggaactcgc ttcctagcta ccgaagaggc aggcatcgct
      721 ggttggcaga aggacggcct ggtggacgcc gccgaccagt cgccagttat cagtcgcgcc
      781 tacacgggca agcgattccg tcttctccca aaccagtgga ccaaagcctg ggaggctgcc
      841 gaccttgacc cacttcccat gccgttgcaa ccggtcctca ccgagttgac cctcgggcct
      901 tgggcaactg accgcggtgg caaggaagga atctctatga acggtgccgg caacatcgtt
      961 ggcctcgtca gggacgtggt gccagcagct gaggtcgtac accagatgat cgccgatgcc
     1021 actgcccgcc ttgatggttt taggccaccc gccgcctgaa cacccacctg taccctgaca
     1081 accggtggtc gaccgcgttt cacaccgggt ttcgcaccgc cgccgggtcg ctagctcatc
     1141 gggtagagca ggggactttt aatcccaagg tgccgggttc gagccccggg cgacccacta
     1201 gtcaaccccc atcatggacg ctgcctgcca acgtgcacgg gttgacgttc cgcagggcaa
     1261 gcacccgttc gacggcctcg tccaaccagc gttcgtccaa cgaaccgtcg tcaagggcgg
     1321 acaacagacc ccacgcgacg ggcaccacgt tggccaggcc accgataatc agtaggtctg
     1381 cgccagcaat gagggcgagg cgggccgcgg tggccacgtc gaccaggtcg gcgacagctc
     1441 ccatggccag atcgtcagta accaccaccc catcgaaggc cagatcgccc cgcagcacgc
     1501 cggtgatggc ggacggtgag agggtggccg gcaccccgtc agtcaggccg ggcaccacca
     1561 gatggccgac catgaccgcc gcaccgtctg gaaccagggc aaacgggagc aggtcgacct
     1621 cccacaggtc ctcgagcgcc ggcgtggtgg tcaactcgtc gtgactgtcg gcgttggccc
     1681 gaccgtggcc tgggaagtgc ttaaccaccg gcacgaggcc gccggccagc accccttcgg
     1741 caaaggcaat gccgtgggtg gataccacct cagggtcgtc agagaacgac cggtcgccaa
     1801 tgcctggtgc ggcgcccacg tcgagcaccg gggcgaggtt caccgtgact cccaaggcac
     1861 gcagtgcctc tgcccggtcc cttgccaacg cacgcacctc gtcaacggga agagccccca
     1921 tggcggcagc cgagggcatc gacccgagca cggactcgaa ccgctgaacc cgaccacctt
     1981 cctcgtcaac ggccaccact actggcccgg tagccgatgc agcctgcaca gcggccaccg
     2041 cagccgagaa gccgtctccc accggacctg ccatcaccac tccggccacc agacctcgcc
     2101 cagcgagatc gaccaccacc gggagttcag cctgggaagc gatgggcagg agcacctgac
     2161 cgatccggag tccgacgggc agaccgccca cgcactcggc tgcggtgggg cccgccggaa
     2221 gagtcgtcga cgtggtcgtc gcgatagtcg acggcggcgt ggtcggaggg gtaacgacgg
     2281 tggtcgtggg gacggtgacc gacacgacca acgtggttgt caccgacacc gaggtagtcg
     2341 agggcggagc cacctccggc gcggtggtcg agggcggagc cacctccgac gaggtaccac
     2401 agcctcccgc tatcaacgcc aacatcaggg ccagcgacac cagcggcatc ctcggcaggc
     2461 aatcaactcc caagccgtgt cgcatccggc cagtggacca tagatccgac ccggccgggc
     2521 cgcgggtgtg agctgacggg tccgaccgtc caatggccgg cctcccgcct agcgtggggt
     2581 catgcgcact ctggtggtga tgctgctcgc tggaatcacc gtcatggctg tcctcttctt
     2641 cggcctcggc ggaaacccga ccgacgagat cgtcatcctg ccggttgcct cgaccacgct
     2701 ggccccggcg acaaccccaa caactgacgc cgccaacatg tccgacagcg acaccctgat
     2761 cgccgttacc accaccgtcg gaatggtcga ggcgaccctg cccaccgagc cgatgggcac
     2821 gctggctccg gtcgagggtc tgggcgtgcc cactctgaac gccgcctcgt cggtgagcac
     2881 cgtgggcatc gaccgggtca tgttcggcat gacactccac gacgctcagg tggcagccgg
     2941 tagccagttc acccccatca ccccggtggg ccactgcttt ctcgtcgttc cagaagccgg
     3001 ccaggccgga ctcacgttct gggtggtggc cggcaccgtc gagcgggtcg acgtcgacac
     3061 ccgcaccatc accacccgct caggcgccgg catcggcgat accgaggatc gcatccggga
     3121 actgttcggt gaacgcatcc acaccaccgc cctacccgac ggttcgggga acctgctggc
     3181 ctacgtcccc aaggacgtgg ccgacgccac ctaccgggtg atgttcttgt ccaacggcct
     3241 ccagatcacg cgggtctggg ccggccgtct cccgtgggcc gaagaaatcg gcggctgccc
     3301 cggctgagcc cccctttcgc tgccggtcag tccccctcgg ctaggtcatg gatgttctcc
     3361 ccacaactca cgaacaccgc gccgtac
//
LOCUS       DASCMR010000072         1830 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000380693, whole genome shotgun sequence.
ACCESSION   DASCMR010000072 DASCMR010000000
VERSION     DASCMR010000072.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1830)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1830)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1830
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000380693"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..950
                     /locus_tag="QGG16_01785"
     CDS             <1..950
                     /locus_tag="QGG16_01785"
                     /inference="COORDINATES: protein motif:HMM:NF014010.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TrkA C-terminal domain-containing protein"
                     /protein_id="HJP24036.1"
                     /translation="IARIVTHRLGIPHQLVADLSDAEEVSHRVLVSDGSHMAYRPLSA
                     LELTVQAGMRVMAVRRGRQWITDVDGDTVLVPGDALFLHGSSDGITRLRELAAAPVWE
                     PLRPEDGEALTDLDRAVDVLVEMKNLSEAAVGLAYSALVLGDRGLAAEVGHLEERLDE
                     MKDHLELWVLGAAAEGLNPSSLRGLLHLAEAAEDLGDQARAMVWLVEEGEELPPILGI
                     ALGEADEVVVRFPVATDSAVDGATLKVLQLNIEPGFTVLAVRRGGGYVYRPRGQVRLS
                     AGDEIIASGPDEGQALLAAMCGWQLVEDDEGEDELLPVG"
     gene            complement(993..>1830)
                     /locus_tag="QGG16_01790"
     CDS             complement(993..>1830)
                     /locus_tag="QGG16_01790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="paraslipin"
                     /protein_id="HJP24037.1"
                     /translation="RVDMREQVIDVPPQEVITKDNVTVTVDAVIYYEPTDAQRLIYNV
                     ANFMLAVTKLAQTNLRNVIGDMSLDNALTSRDNVNVALREVLDDATDKWGVKVVRVEI
                     QRIDPPTDVMNAMHEQMKAERNRRAVVLEADGTREAAITRAEGDKQSVILAAEGDRQQ
                     AILQAEGEANAIRAVADAERYRELTVAEGEAEAVRSVYQAIHDGGPTPDLLAIKYLEA
                     LGVIADGRATKIFLPTDLGATLGSIGAIAELFNGDGDGMAPGAVSVPEAPVEDTGEES
                     AD"
BASE COUNT          278 a          589 c          622 g          341 t
ORIGIN      
        1 acatcgcccg gatcgtcacc caccgtctgg gcattcccca ccaactggtg gccgatctat
       61 ccgacgccga ggaggtatcc caccgggtac tggtcagcga cggctcgcac atggcctacc
      121 ggcccctgtc ggccctcgag ttgaccgtgc aggccggaat gagggttatg gcggttcgcc
      181 ggggtcgcca gtggatcacc gacgtggacg gcgacaccgt gttggttccc ggcgacgcgt
      241 tgttcctcca tggctcgagc gatgggatca cccgtctacg cgaactagcc gccgcgccgg
      301 tctgggaacc gttacgcccc gaggacggcg aggccctgac cgatctggat cgtgccgttg
      361 acgtgctggt cgagatgaag aacctttccg aagcagccgt cggactggcc tacagcgcgc
      421 tggtgctcgg cgaccgtggg ctggccgccg aggtgggcca cctcgaggaa cggcttgacg
      481 agatgaagga ccacctcgaa ttgtgggtac taggtgcggc tgccgagggg ctgaacccgt
      541 cgtcgctacg cggtctccta cacctagccg aggccgccga ggacctaggc gatcaggccc
      601 gagccatggt ctggctagtc gaggagggtg aggaactgcc cccgatcctg gggatcgcct
      661 tgggcgaggc cgacgaggtg gtggttcgat tcccggtggc taccgacagc gccgtggacg
      721 gggccaccct caaggtcctg caactcaaca tcgaacccgg cttcaccgtg ttggccgtcc
      781 gtcgaggcgg tggttacgtc taccggcccc gaggtcaggt tcgcctgtca gcgggcgacg
      841 agatcatcgc cagtggcccc gacgaaggtc aggccctcct ggctgccatg tgcggctggc
      901 agcttgtcga ggatgacgag ggcgaagacg agttgttgcc cgtcggctga tcgggatcca
      961 gttcggcctg cgggtcggcc gggccgaaaa ggtcagtcag cggattcctc gccggtgtcc
     1021 tctacaggcg cttcgggaac agatacagct cctggcgcca tcccgtcgcc gtcgccgttg
     1081 aacaactcgg cgatcgctcc gatcgacccg agcgtcgctc cgagatcggt gggcaggaag
     1141 atcttggtgg cccgaccgtc ggcgatcacc ccgagggcct cgaggtactt gatggccaga
     1201 agatccggtg tcgggccacc gtcgtggatg gcttggtaga cgctgcggac cgcctcagcc
     1261 tcaccctcgg ccaccgtgag ctcccggtag cgctcggcgt cggccaccgc ccggatggcg
     1321 ttggcctcac cctcggcttg gagaatggcc tgctgacggt cgccctcggc ggccaggatc
     1381 accgactgct tgtcgccctc ggcccgggta atggccgcct cgcgggtgcc gtcggcctca
     1441 agtaccacgg ctcggcggtt gcgttcggcc ttcatctgct cgtgcatcgc gttcatgacg
     1501 tcggtcggcg ggtcgatccg ttggatctcg acgcgcacga ccttcacgcc ccatttgtcg
     1561 gtggcgtcgt cgagcacctc gcgaagcgcc acgttgacgt tgtcgcgtga cgtcaacgcg
     1621 ttgtccaacg acatgtcgcc gatcacgttc cgcaggttgg tctgggccaa cttggtgacg
     1681 gccagcatga agttggccac gttgtagatg aggcgctggg catcggtggg ctcgtagtag
     1741 atgacggcgt ccacagtgac cgtcacgttg tccttggtga tgacctcctg cgggggtacg
     1801 tcgatgacct gctcgcgcat gtcaactcgg
//
LOCUS       DASCMR010000073         2563 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000395922, whole genome shotgun sequence.
ACCESSION   DASCMR010000073 DASCMR010000000
VERSION     DASCMR010000073.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2563)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2563)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2563
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000395922"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            123..1385
                     /locus_tag="QGG16_01795"
     CDS             123..1385
                     /locus_tag="QGG16_01795"
                     /inference="COORDINATES: protein motif:HMM:NF017760.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJP24038.1"
                     /translation="MSTGAQVSPGRRYPAMAFRNYRLFWIGGALTNNGRWTQYVATYW
                     IVYQITESAAWVGTAAFASFIPMLITNPVAGYVSDRFDRRKVLLCTNTGCSLLAALMA
                     ITWGLGVRNVAAWIGLLLAGGFVYGIQLPTWQSFVAECVPREHLRNAITLNSTQFNAA
                     RTFGPALGGVLIGTVGPGWALFVAAAFYGPVLTALYLIRASDLFRPERVPDGNPTDHA
                     PSILGDYRESIRYVLGSPGIRVAIGTTALVSTMGQPVVQQIVVFAEEVFEVSPFWFGM
                     LGSAQGLGALLAAPLIVGELGQMKRSRIQVFATCGYGIALMLFAAAPVLWMGFVGLGL
                     IGCMHLGSASNLNATVQLQVADTIRGRVMALYLMGVLGVSPFANLAMGAAIAVFGPRP
                     VVAFAGLVVLGGGVFLHLTGRFRLLDVN"
     gene            complement(1431..2399)
                     /locus_tag="QGG16_01800"
     CDS             complement(1431..2399)
                     /locus_tag="QGG16_01800"
                     /inference="COORDINATES: protein motif:HMM:NF024117.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HJP24039.1"
                     /translation="MSEDRGADDPTTQREELNPAQQAVLDELGARAGDRPEFDEDLRP
                     HLRAALETAIEPHLDALPPNEDVYLSKHRLGQVHGCEAKYLAEDAEDFEWRVPIARGS
                     VVHKAVELAVHWRRDFEPPSLVDEALARLEAEDRGLGYWLQGVSEAERAELRSLAVDS
                     FTKFVECWPRLQPAWRPVTESRLRAELCDGRVVLDGKVDLSLGTARGLQAGKVIVDFK
                     TGTSLPLHREDLRFYALIDALRIGVPPRMLASYYLDRAHFVPEAVTIETLRTTIARVA
                     DGVGRLVELRHGGRTPNRIPGPPCRWCPAYDECDVGQAHRAEFDDD"
BASE COUNT          381 a          826 c          892 g          464 t
ORIGIN      
        1 catggtcgga gtctcgcacg ggcccgatcg gagctgacca tcagagttct ggccatcaga
       61 gtgcaggcag ccccagatgt ccgctagccg gtgcggacgg ggcctcatct agggtcgaaa
      121 tcatgtcgac cggagctcaa gtctcgcccg gtcggcggta tccggcgatg gccttccgca
      181 actatcgact cttctggatc ggtggtgcgc tcaccaacaa cggccggtgg acccagtacg
      241 tggccaccta ctggatcgtg taccagatca ccgagtccgc ggcctgggtg gggactgccg
      301 ccttcgcgtc gttcatcccg atgctgatca ccaatccggt ggccggctac gtgtcggacc
      361 gcttcgaccg ccgaaaggtg ctgctgtgca cgaacacggg ctgctccctg ctggctgcgc
      421 tgatggccat cacctggggt ctgggcgttc gcaacgtggc agcctggatc ggccttttgt
      481 tggctggtgg gttcgtctac gggatccagc tgcccacctg gcagtcattc gtggccgaat
      541 gcgtcccccg cgagcacctc cgcaacgcca tcaccttgaa ctcaacccaa ttcaacgcgg
      601 cccggacgtt cggcccggct ctcggcggtg tactcatcgg aacggtcgga cccgggtggg
      661 cgttgttcgt ggcggccgcc ttctacggtc cggtcctcac cgcgttgtac ctgattcggg
      721 cctctgacct gttccggccc gaacgggtgc ccgacgggaa tccgaccgac catgcgccgt
      781 cgatcctcgg ggactatcgg gagtcgatcc ggtacgtcct gggctcgccg ggcatcagag
      841 tggccatcgg gaccaccgct ctcgtgtcga ccatgggtca gccggtggtc cagcagatcg
      901 tggtgttcgc cgaggaggtg ttcgaggtct cgccgttctg gttcggcatg ctcggttcgg
      961 cgcagggcct gggtgccctg ctggccgccc cgctaatcgt cggggaactc gggcagatga
     1021 agcgctccag gatccaggtg ttcgccacct gcgggtacgg catcgctctc atgttgttcg
     1081 cggccgctcc agtcctctgg atggggttcg tgggactagg cctgatcgga tgcatgcacc
     1141 tcgggtcggc ctccaacctg aacgccaccg tgcaactcca ggtcgccgac accattcgtg
     1201 ggcgggtgat ggccctgtac ctgatggggg tgctgggggt gtcgccattc gccaacttgg
     1261 ccatgggggc ggccatcgcc gtgttcggcc cccgcccggt cgtggccttc gccggtctcg
     1321 tggtgctcgg cgggggagta ttcctccacc tcacgggccg gttccgactc ctcgacgtca
     1381 attgaggagc gatccgagcg gacggccgac ctgagacgac cggctgatcg tcagtcgtcg
     1441 tcgaactcgg ctcgatgggc ctgaccgaca tcgcattcgt cataggccgg acaccacctg
     1501 cagggtggtc ccggtatccg gttcggcgtt cggccgccgt ggcggagctc gaccagtcgc
     1561 ccgacgccgt cggccacccg ggcaatggtg gttcggaggg tttcgatggt caccgcctcg
     1621 gggacgaagt gggcccgatc cagatagtag gaagccaaca tccgcggtgg aacgccgatc
     1681 cggagtgcat cgatcagggc gtagaagcgg aggtcctcgc ggtgaagggg aagagacgtg
     1741 ccggtcttga agtccacgat gaccttgccg gcctggagcc cgcgggccgt gcccaaggag
     1801 aggtcgacct tgccgtcgag gactacccgg ccgtcacaca actcggcccg gagtcgggac
     1861 tcggtgaccg gtcgccaggc cggctggagg cgaggccagc actccacgaa cttcgtgaag
     1921 gagtccacgg caagggaacg cagttcggcc cgttcggcct cggacacccc ctggagccag
     1981 tagcccaggc cccggtcctc agcttcgagg cgggccaggg cctcgtcgac cagggacgga
     2041 ggctcgaagt cccgtcgcca gtggacggcc agttccacgg ctttgtgcac cactgatcca
     2101 cgggcgatgg gcacccgcca ttcgaaatcc tcggcatcct cggcgaggta ctttgcctcg
     2161 cacccgtgga cctgaccgag tcggtgtttg gagaggtaga cgtcctcgtt cggcgggagg
     2221 gcgtcgaggt gcggctcgat ggccgtctcg agggccgctc ggaggtgcgg gcggaggtcc
     2281 tcgtcgaatt ccgggcgatc gccggccctg gcgcccaact cgtcgagcac cgcctgctgg
     2341 gcggggttca gctcctcgcg ttgggtggtg gggtcatcgg cccctcggtc ttctgacatg
     2401 agacgagtat gacccgagag ggctgtcaca ggcgggcgcg aagatcgtcg gcatggagcg
     2461 gagagatgag agatcaccaa gagcgggtac cgggcgcagc gagagcccgg gggccatccg
     2521 gttcgccgaa gcggcccggt cgatcgggcg ggccgcccgg ttg
//
LOCUS       DASCMR010000074         2106 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000403018, whole genome shotgun sequence.
ACCESSION   DASCMR010000074 DASCMR010000000
VERSION     DASCMR010000074.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2106)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2106)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2106
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000403018"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..548
                     /locus_tag="QGG16_01805"
     CDS             <1..548
                     /locus_tag="QGG16_01805"
                     /inference="COORDINATES: protein motif:HMM:NF013279.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HJP24040.1"
                     /translation="QSEVLEDYQIRRLLVFVDDETDTAASYNLEQAEVAIGNGGLTGR
                     GLFKGTQNNSALVPEQQTDFIFTVVAEETGFVGGALLLGLIGLLLLRVLRIGQMADDR
                     FGLLLSAGVFSMLAFQVFQSVGMSTGIMPITGIPFPLVSYGGSSMLTNCLALGLVQSV
                     HMRRHQVLSRRTESTRRGQPA"
     gene            567..>2106
                     /locus_tag="QGG16_01810"
     CDS             567..>2106
                     /locus_tag="QGG16_01810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03960 family B12-binding radical SAM
                     protein"
                     /protein_id="HJP24041.1"
                     /translation="MSSLWSELERVLGEVQKPARYIGCEDGMTVPDHHPDAVAWLLLY
                     PDTYEVGLPNQGLQILYEILNERSDAVAERSYAPWTDLAEVLRREGLPLFSVDTHRPA
                     RDFDILAFNLSAELVFTNVLECVDLAGIPVRTADRTDDDPLVLVGGHCAYNPEPLADY
                     VDAAVLGDGEEVVGEITEVVAAWKAAGGGLRGGLHRRLGMVAGVYVPSLYEATFADGR
                     LQGVRPRPESTEAIEVVEKRTVADLADWPYPKKQLVPVTEVVHDRLNVEVFRGCTRGC
                     RFCQAGMITRPVRERPAGQVRTMVSEGLKRTGYDEVALTSLSTADFSGIEQVVAETVA
                     DDACGQVSVSLPSLRVDAFTVGIAAEIQKARRTGLTFAPEAGSWRMRQVINKLIREED
                     LYAAVEAAYSQGWRRVKLYFLTGLPTETDEDTLGILHMARRCVEVGRQHIRNPSVTVS
                     VGGFVPKPFTPFQWFGQNTETELRRKVGVLRDELKRDTKGYRGVQLKWHDPRATAIEG
                     LLSRG"
BASE COUNT          359 a          642 c          707 g          398 t
ORIGIN      
        1 tccagtccga ggtgctggag gactaccaga tccgtcgcct actggtgttc gttgacgatg
       61 agaccgatac ggcagccagc tacaacctcg aacaggccga ggtggccatt ggcaacgggg
      121 gattgaccgg gcgaggcctc ttcaagggga cgcagaacaa ctctgcgctg gtgcccgagc
      181 agcagacgga cttcattttc accgtggtgg ccgaagagac aggtttcgtg ggcggtgccc
      241 tcctcctcgg cctgatcgga ctactgctcc tccgggtcct ccgtataggg cagatggctg
      301 acgaccggtt cggcctgttg ttgtcggccg gcgtgttttc gatgctggct ttccaggtgt
      361 tccagagcgt agggatgtcc accgggatca tgcccatcac cggaatccca ttccctctgg
      421 tcagctacgg cggatcctcg atgctgacaa actgtctggc cctcggcctc gttcagagcg
      481 ttcacatgcg acgccaccag gtcctgagcc ggaggaccga gtccacaagg cggggccagc
      541 ccgcctgatc ggtacgatag tgaatcatga gttcgctctg gtctgaactc gagcgtgtcc
      601 tcggcgaggt ccagaagccg gcccgctaca tcggctgcga ggacggtatg accgtccccg
      661 atcaccatcc cgacgcagtg gcttggctcc tgctctaccc ggacacctac gaagtcggcc
      721 ttcccaacca gggtcttcag atcctgtacg aaatcctcaa cgaacggtcc gatgcggtgg
      781 ccgagcgtag ctatgccccg tggaccgacc tggccgaggt gctacgtcgt gagggcctgc
      841 cgttgttctc ggtcgatacg caccgaccgg cacgcgactt cgacatcctg gccttcaact
      901 tgtcggctga gctggtgttc accaacgtgt tggagtgcgt ggatctggct ggcatcccgg
      961 tccggaccgc cgatcgcacc gacgacgacc cgttggtgct ggtgggcggc cactgcgcct
     1021 ataaccccga gccgctggcc gactatgtag atgcggcggt gctgggcgac ggcgaagagg
     1081 tggttggtga aatcaccgag gtggtggccg cctggaaggc cgccggtggt ggcctccgag
     1141 gcggcctgca cagacgtcta ggcatggtgg caggcgtgta cgtcccgtcg ctttacgaag
     1201 cgactttcgc cgatgggcgc cttcaaggcg ttcggccgag gcctgagtcg acagaggcca
     1261 tcgaggtggt cgagaagcga acggtggctg atctggccga ttggccgtac ccgaagaagc
     1321 aactggtgcc ggtgaccgag gtggtccatg accgtctcaa cgtggaggtg ttccggggct
     1381 gtacccgggg ttgccgcttc tgccaggccg gcatgatcac ccggccggtc cgcgagcggc
     1441 ctgccggcca ggttcggacc atggtctcgg agggcctgaa gcgaacgggg tatgacgagg
     1501 tggccctcac ctcgctttct actgctgact tcagcggcat cgaacaggtt gtggctgaaa
     1561 cggtcgccga tgacgcctgc gggcaggtct cggtgtcgct gcctagcctg cgggttgatg
     1621 ctttcacggt gggtatcgcc gccgagatcc agaaggcgcg acgaaccgga ttgacctttg
     1681 cccctgaggc gggttcctgg cgcatgcgac aggtcatcaa caagctcatc cgcgaagagg
     1741 acctctacgc ggcggtcgag gcggcctact cgcagggctg gcgccgggtg aagctctact
     1801 tcctaaccgg tctcccgaca gagaccgacg aggacacgct gggcatcctc cacatggctc
     1861 gtcgatgcgt agaggtcggg cgccagcaca tccggaaccc gtcggtcacg gtgtcggtgg
     1921 gcgggttcgt gcccaagccg ttcacacctt tccagtggtt cgggcagaac acggagactg
     1981 aattgcgtcg gaaggtgggc gtgcttcgcg atgaacttaa gcgcgacacc aagggctacc
     2041 ggggagtgca actcaagtgg cacgatccgc gggccacggc catcgagggc ctgctgagcc
     2101 gcggtg
//
LOCUS       DASCMR010000075         1521 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000404221, whole genome shotgun sequence.
ACCESSION   DASCMR010000075 DASCMR010000000
VERSION     DASCMR010000075.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1521)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1521)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1521
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000404221"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..703
                     /locus_tag="QGG16_01815"
     CDS             <1..703
                     /locus_tag="QGG16_01815"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJP24042.1"
                     /translation="APFIAETVTARDLLFGLGAGLSGVVGIGCLYHCLGRGPMAVVAP
                     ITAVSNAAIPALWGVCFGDRLDPLQVAGVFLGMAAITMVSRQKGDDSDPRSLTPGLLG
                     EALLAGVGFGGFFIFMGQTAEATTPWPLVSARVVSAGVALLLLARMRRSPIPRRDEGR
                     ATIVGAGILDMAANLTILYAIHRGMLSLVVVLGSLYPVSTVVLARYVLHERMSRTQIL
                     GLLVALTAIAAIVSG"
     gene            complement(715..>1521)
                     /locus_tag="QGG16_01820"
     CDS             complement(715..>1521)
                     /locus_tag="QGG16_01820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit C"
                     /protein_id="HJP24043.1"
                     /translation="GLLQTVTRNADEEFVRHRLKRASDHNSRARALNELQVALSLPEA
                     PLRIECYDMSHLQGTDYVGSMVVLEDGLPRTSDYRRFRIRHVDGNDDYAAMAEVLTRR
                     LTAFLEEQAMAVDERPGRFAYPPQLLLVDGGKGQLGVAERVVAELGLADRIPVASLAK
                     QFEEVFRPGSSDPVRLPRGSEALYLLQRIRDESHRFAIAYHRQLRSKRMTGSVLDGIA
                     GLGPARRKRLVSAFGGVRAVQRASLDELQALTWLPDQVANAVFAKAHKVG"
BASE COUNT          244 a          528 c          466 g          283 t
ORIGIN      
        1 cgctccattc atcgctgaaa cggtgaccgc ccgcgacctt ctcttcggtc taggggccgg
       61 cctctcgggc gtcgtgggta tcggctgcct ctaccactgc ctcggtcgag gcccgatggc
      121 cgtggtcgcc ccgatcacag cagtaagtaa cgccgcgatt cctgcccttt ggggcgtctg
      181 cttcggcgac cggctcgatc cgcttcaggt ggccggcgta ttcctgggca tggcagccat
      241 caccatggtc tcccgtcaga agggggacga ttcagatccg agatccctga ccccggggct
      301 actgggtgag gccctcctgg cgggtgtcgg cttcggcgga ttcttcatct tcatgggcca
      361 gacggctgag gcgaccaccc cgtggcccct ggtgagtgcc cgggtcgtgt ccgccggcgt
      421 ggcgctcctt ctcctagccc ggatgagacg gtcgcccatc cctcgccgcg acgagggacg
      481 agcgaccatc gtcggtgccg ggatcctgga catggccgcc aacctgacca tcctctacgc
      541 catccaccgg gggatgctga gcctcgtagt cgtcctcggc tctctctatc cggtatcgac
      601 agtggtgcta gcccgctacg tcctgcacga gcggatgtcg cgaacacaga tcctcggact
      661 gctggtcgcc ctgacggcca ttgctgccat tgtcagcggc tgaagcgttt ctcgtcaccc
      721 aaccttgtgg gccttggcga acacggcgtt agcgacctgg tcagggagcc aggtgagcgc
      781 ttgcaactcg tccagtgacg ctcgctgcac ggcccggacg cccccgaagg ccgacaccag
      841 ccgctttcgc cgagccggtc ccagaccggc gatgccgtca agcaccgatc ccgtcatcct
      901 cttggaccgc aactgccggt gataggcaat ggcgaaccgg tgcgactcgt cacgaatccg
      961 ctgcagcagg tacaacgctt cggatccacg gggaagacgg accggatcgg acgacccggg
     1021 ccggaagacc tcttcgaact gcttagccag tgacgccacc ggaatccgat cggccaggcc
     1081 gagctcggcc acgacccgct cagccacgcc cagctggccc ttgcctccgt ccactaacag
     1141 gagctggggc gggtaggcga aacgccccgg tcgttcgtcg accgccatgg cctgctcctc
     1201 gaggaatgcc gtcagacgcc gagtcaggac ctcggccatc gccgcgtaat cgtcgttgcc
     1261 atccacgtgg cgtatccgga atctccggta gtccgaggta cgtgggagac cgtcctccag
     1321 caccaccatt gagcccacat agtccgttcc ctgtaggtga ctcatgtcgt agcattcgat
     1381 ccgtagtggt gcctcaggca gcgacagagc cacttggagt tcgttcaagg cccgggcccg
     1441 gctgttgtgg tccgatgccc gcttcagacg atgccggacg aactcctcgt cggcattgcg
     1501 agtcactgtc tgcaacagcc c
//
LOCUS       DASCMR010000076         2335 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000407295, whole genome shotgun sequence.
ACCESSION   DASCMR010000076 DASCMR010000000
VERSION     DASCMR010000076.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2335)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2335)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2335
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000407295"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1153
                     /locus_tag="QGG16_01825"
     CDS             <1..1153
                     /locus_tag="QGG16_01825"
                     /inference="COORDINATES: protein motif:HMM:NF012334.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HJP24044.1"
                     /translation="VRTGLWDLGAVYGDPDGPYAPLVESMEVGDDRAWARALDPASVS
                     ATMVAVTEGRRGLRHPIGLTARARFAARGIVPAGVQRRIISRLTHQAPSMASPRNPDG
                     VIIVTGCSSGFGLDITVELARRGRRVAATMRDLARRGPLDAALAEAGVADRVEVLRMD
                     VTDPASIDEAFARADRWVELAGDVGRIVGLVNNAGVVSVGPFEELPPAEAGRVIETNL
                     VGTLAVTHAALPRMRPHGGRIVCMSSSSGFGGLPTWSAYAASKWGVEGFAESLALEVG
                     PHGIDVALVEPGAFPTGIWRDDSWHGYPGGPYAALTEAMANADRRAAELGGDPMVVAR
                     AVASCFSGGLVGGRPWTRRPVGRGAWLRWAARGVVPFGIQRRIVARMLG"
     gene            1181..>2335
                     /locus_tag="QGG16_01830"
     CDS             1181..>2335
                     /locus_tag="QGG16_01830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP24045.1"
                     /translation="MDFDFPPDDDPRRLAVREWLAAHPEPTARQLHDAGYVVPHWPAP
                     HGIGAEPMHQILIDDELRRAGVRRPVNPIGIGWAAPTISMAGTDEQKERYLDPIFTGE
                     EFWCQMFSEPDAGSDLANIGTRAVRDGDEYVVNGSKIWTSGGHKAAFGILIARTDPGQ
                     PKHKGISYFVCPTDLPGLTMTPIIDATTAHSFNQVFFDDVRIPAENLVGAEGDGWRLA
                     RVTLANERVSLSSAGSLWGEGPSADDLLNLVRGNGGVADPVERQRLAGLWCEAEVLRL
                     NRLRTLTAQIAGKEPGAEASIQKAMADEHGQHVMELAKEMAGTAGMLVGSGPPGRLDA
                     AKAGGTTENRLDTRQFPDVSSIWHYGYVFAPALTLGGGTFAVQRNIIAERV"
BASE COUNT          354 a          741 c          856 g          384 t
ORIGIN      
        1 ggtacgtacc ggcctgtggg acttgggcgc cgtttacggt gacccggacg ggccgtacgc
       61 cccgctcgtg gagagcatgg aggtcggcga cgatcgggcg tgggcccgag cgctggaccc
      121 ggcgtcggtg tcggcgacca tggtggccgt caccgaggga cgaaggggcc tacgccatcc
      181 gatcggtctg acggcccggg cacggttcgc ggcccgggga attgttccgg cgggtgttca
      241 gcggaggatc atcagccgtc tcacccacca ggcaccgtcg atggcgtcgc cccgaaaccc
      301 cgacggcgtc atcatcgtca ccggctgctc gtcgggtttc ggcctggaca tcaccgtgga
      361 actggctcgg aggggtcgcc gggtggcggc caccatgcgt gacctggccc ggcgcggccc
      421 gttggacgca gcgctggccg aagccggcgt ggccgaccgc gtcgaggtac tccgcatgga
      481 cgtcaccgac ccggcgtcga tcgacgaggc gttcgcccgg gcagaccggt gggtcgagtt
      541 ggccggcgac gtgggccgga tcgtaggtct cgtcaacaac gccggcgtgg tgtcggtcgg
      601 gcccttcgag gaactgcccc cagccgaggc tggccgggtc atcgagacga accttgtggg
      661 caccctggcc gtgacccatg ccgccctgcc ccgcatgcgt ccgcacggtg gtcgcatcgt
      721 gtgcatgtct agctccagtg gcttcggcgg gctaccgaca tggtcggcct atgcggcctc
      781 caagtggggg gtcgaggggt tcgccgagtc gttggccttg gaggtcggtc ctcacggcat
      841 cgatgtggcc ctcgtcgaac cgggggcttt ccccaccggg atctggcggg acgattcatg
      901 gcacggctac ccgggcggcc catacgccgc gctgaccgaa gcaatggcca atgcggatcg
      961 cagggctgca gagcttgggg gcgacccgat ggtggtggcc cgggcggtgg ccagctgctt
     1021 ctctggaggt ctggtcggcg gccgaccgtg gacccggcgc ccggtggggc gtggggcctg
     1081 gctgagatgg gcggcccggg gcgtagtgcc tttcgggatc cagcggcgca tcgtggcccg
     1141 catgctgggc tgactccgtc agggggtcag aatcgtcgag atggacttcg attttcctcc
     1201 ggacgacgac ccccgccgac tggccgtccg ggagtggctg gccgcccatc ccgagccaac
     1261 ggcccgacag cttcacgatg ccggctacgt ggtaccccac tggccggctc cccacgggat
     1321 cggcgctgaa ccaatgcacc agatcctcat cgatgacgag ctccgacggg ccggggtgcg
     1381 gcgcccggtc aatccgatcg gaatcggttg ggcggctccc accatttcca tggccgggac
     1441 cgacgagcag aaggagcggt acctggaccc gatttttacc ggggaggagt tctggtgcca
     1501 gatgttctct gagcccgatg ctgggtcgga tctggccaac atcggaacac gggcggtacg
     1561 cgacggcgac gagtacgtgg tcaacgggtc gaagatctgg acgagcggtg gccacaaggc
     1621 ggccttcggg atcctgatcg ctcggactga tcctggtcag cccaagcaca aggggatctc
     1681 atacttcgtc tgtccaaccg atctacccgg cctgaccatg acgccgatca tcgacgccac
     1741 cacggcccat tcgttcaacc aagtgttctt cgatgacgtg cgtatcccgg ccgagaatct
     1801 ggttggggct gagggcgacg gctggcgtct ggcccgggtg accctggcca acgagcgggt
     1861 gtcgttgtcg tcagccggtt cgctgtgggg cgagggcccg tcggccgatg acctactcaa
     1921 cctggtccgc gggaacggcg gggtggccga cccggtagag cggcagcgtc tggccgggct
     1981 gtggtgtgaa gccgaggtgc tgcgccttaa ccgcctgcgg acgttgacgg cccagatcgc
     2041 cgggaaggaa ccgggcgccg aggcgtccat ccagaaagcc atggctgatg agcacgggca
     2101 gcacgtcatg gagctggcca aagagatggc cggcacagcg ggaatgctgg tgggatccgg
     2161 gccgccgggc cgcctcgacg cggcgaaggc cgggggaacg acagagaatc gcttggatac
     2221 ccgacagttt ccggacgtgt cgtcgatctg gcactacggg tacgtattcg ccccggcact
     2281 caccttggga gggggaacgt tcgccgtgca gcgcaacatc atcgccgagc gtgtg
//
LOCUS       DASCMR010000077         2205 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000438213, whole genome shotgun sequence.
ACCESSION   DASCMR010000077 DASCMR010000000
VERSION     DASCMR010000077.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2205)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2205)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000438213"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..850
                     /locus_tag="QGG16_01835"
     CDS             <1..850
                     /locus_tag="QGG16_01835"
                     /inference="COORDINATES: protein motif:HMM:NF012744.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HJP24046.1"
                     /translation="VFNVQDVFPDVAVEVGAIRSPRAIAFFRWLERATYRRADAVTVL
                     SADLAANVARKIDVAGGTGRRPVVRVVPNFVDTESIRPADRMTRYRVEHGLGDRTVVM
                     YAGNLGHSQSLDLVVAAADCHRDRHDLVYVVNGGGVRADDLRAAAAQRKNLVVVDYQP
                     ADRVPEVLASADLHLVPLRAGLGESSVPSKTYSVLAAGRPLIASIDEDSEVARVVVEA
                     GAGLAVPPDDVEALVEAVEALVADPERRTRRGEAGRRWAEAWRSPDQIAVTYAELVAE
                     LGGAGA"
     gene            886..1572
                     /locus_tag="QGG16_01840"
     CDS             886..1572
                     /locus_tag="QGG16_01840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24047.1"
                     /translation="MARGDSASKVARAARAGASGGTGERRKIGFPAMVALVVVLGSLL
                     VFWARTDREATSAPRVGDHWHSVYDVYVCDTFRSKIVLETDPNGIHTHGDGLLHIHPF
                     NKLASGRDATLGEFFSAFGGSIDDQSFVLDTGETVAEGFDCGGEPAVLKVARFDADDL
                     DRDPEILTEDLAGIRFLKDREAFTIAMVPESVDPPAPRSERMSFLDLVSPDKLASDSP
                     TLVPTTTAAD"
     gene            1584..>2205
                     /locus_tag="QGG16_01845"
     CDS             1584..>2205
                     /locus_tag="QGG16_01845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HJP24048.1"
                     /translation="MQAVVLVGGLGTRLRPLTADTPKQMLPVVDRPMIEHVVAHLTGH
                     GVTRVVLSMGFHPEAFTDAYPDGACVGVPLHYAVEPEPLDTAGAVRFAAVAAGIDETF
                     LVLNGDVLTDLDVSTMVAGHRASGAMGTIALTEVDDPSRYGVVTVAPDDGSVELGDMT
                     HGRVTGFVEKPPRGEAPSNWINAGTYVLEPAVLDRIEAGRRVSIERE"
BASE COUNT          323 a          747 c          775 g          360 t
ORIGIN      
        1 ggtattcaac gtgcaagacg tgttcccgga cgtggccgtc gaggtggggg ccatccggtc
       61 gccccgagcc atagcgttct tccggtggct ggagcgggcc acttaccggc gggccgacgc
      121 cgtcaccgtc ctgtccgccg acctggcggc caacgtcgcc cggaagatcg acgtggccgg
      181 tggtacgggc cgccgcccgg tggtccgagt ggtgcccaac ttcgtggaca ccgagtcgat
      241 ccggcccgcc gaccggatga ctcgttaccg ggtcgagcac gggctgggcg accggacggt
      301 cgtcatgtac gccgggaacc tcggccactc ccagtcgctc gacctcgtgg tggccgccgc
      361 tgactgccac cgggaccgcc acgacctcgt ctacgtggtg aatgggggag gagtcagggc
      421 cgacgacctt cgggccgccg cggcccagcg gaagaacctg gtggtggtcg actaccagcc
      481 tgccgaccgg gtgcccgagg tgctggccag tgctgacctc cacctggtgc cgttgcgggc
      541 cggcctgggt gagtccagcg tcccgtccaa gacctactcg gtcctggccg ccgggcggcc
      601 gctgatcgcc tccatcgacg aggattccga ggtggcccgg gtggtggtcg aggcgggagc
      661 cgggctggcc gtgccgcccg acgacgtcga ggccctcgtc gaggcggtgg aggcgctcgt
      721 cgccgatccg gagcgcagga cccggagggg tgaggcgggc cgacgctggg ccgaggcgtg
      781 gcggtcgcct gaccaaatcg ccgtcaccta tgccgaactg gtggccgaac tgggaggcgc
      841 cggggcctga tgatcggggc cggcgcgccg ctagcctcgg cgcccatggc acgtggagat
      901 tcagcgagca aggtcgcgcg cgccgcccgg gcaggagctt cgggtggcac tggtgaacga
      961 cggaagatcg gctttccggc aatggtcgcc cttgtcgtcg tcctcgggtc cctcctggtc
     1021 ttctgggccc ggaccgaccg ggaggccacc tcggccccgc gggtcggcga ccactggcac
     1081 tcggtgtacg acgtctacgt ctgtgacacc ttccgctcca agatcgtgtt ggagaccgat
     1141 cccaacggca tccacactca cggtgacggc ctgctacaca ttcacccgtt caacaaactg
     1201 gcctcgggtc gcgacgccac gttgggtgag ttcttctcgg ccttcggcgg ctccatcgac
     1261 gaccagtcgt tcgtgctgga taccggagag acggtggccg agggctttga ctgcggcggc
     1321 gaaccagccg tgctgaaggt ggcccgcttc gacgccgacg acctggatcg cgacccagag
     1381 attctgaccg aggacctggc tggcatccgg ttcctcaagg accgtgaggc gttcaccatt
     1441 gccatggtgc ccgagtcggt cgaccctccg gcgccgcgga gcgaacgcat gtccttcctg
     1501 gacctcgtga gcccggacaa actggcgtcg gattcgccga cgctggttcc cacgacgacc
     1561 gccgcggact agccggtcgg gccgtgcagg ccgtcgtcct cgtcggggga ctgggtaccc
     1621 gacttcgtcc gctcaccgcg gacacaccca agcagatgct gccggtcgtg gatcgaccca
     1681 tgatcgaaca cgtggtggcc catctaaccg gccacggggt gacccgggtg gtgctgtcga
     1741 tgggctttca tcccgaggcc ttcaccgatg cgtacccgga tggggcctgt gtcggggtgc
     1801 cgctgcacta cgccgtcgaa cccgagcctc tggacaccgc cggagcggtg cggttcgccg
     1861 ccgtcgccgc cggaatcgac gagaccttcc tggttctgaa cggtgacgtc ctgaccgacc
     1921 tcgacgtctc gaccatggtc gctggccacc gggcgtcggg agcgatgggg accattgcgt
     1981 tgaccgaggt cgacgaccct tcgcgttacg gggtggtcac ggtcgcaccc gacgacggtt
     2041 cggtcgaact gggggacatg acccacggcc gggtgaccgg cttcgtcgaa aagccgcccc
     2101 gtggcgaggc accctcgaac tggataaacg ccggcactta cgtccttgaa ccggcagtcc
     2161 tcgaccgcat cgaagctggt cgccgggtat ccatcgaacg ggagg
//
LOCUS       DASCMR010000078         5787 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000438412, whole genome shotgun sequence.
ACCESSION   DASCMR010000078 DASCMR010000000
VERSION     DASCMR010000078.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5787)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5787)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5787
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000438412"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(138..926)
                     /locus_tag="QGG16_01850"
     CDS             complement(138..926)
                     /locus_tag="QGG16_01850"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HJP24049.1"
                     /translation="MLLTIDVGNTQTVLGLYEVGSPVAAADSGLVDHWRIRTDHDRTA
                     DEHAVLIRNLLRQGGHDLEGQVTGVAICAGVPRVLASLRTMIDRYVDFEPVVIGPGVK
                     TGMPILYDNPREVGADRIANAVGAYDLYGGPTVVVDFGTGNNFDVISADGEFLGGAIA
                     PGVEVSLDALFGRASALRAVELAEPRNVIGKSTVESLQSGAVYGFAAQIDGMVERFRE
                     ELGGCTVVATGGLAHLIAPSTATIEHVEPFLTLHGLRLVHERNL"
     gene            complement(926..1918)
                     /gene="nadC"
                     /locus_tag="QGG16_01855"
     CDS             complement(926..1918)
                     /gene="nadC"
                     /locus_tag="QGG16_01855"
                     /EC_number="2.4.2.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR00078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0019363 - pyridine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HJP24050.1"
                     /translation="MSRSGTDPGQAWPVHDPNPQSSAGRLPSSLVAHLADQAGSLEPQ
                     ADEVADAVVLALHEDLTPDGDLSASLVPADAMADGVLASRDDGVLAGSACATEAFAQV
                     SDAIEVLWLRADGDRIAPGDVVATVRGPLAPILTAERTALNFLCHLSGVATTTALWVE
                     GAGATRIWDTRKTTPGLRALERAAVRAGGGWNHRTNLSHWVMLKDNHLTGTDIASAVA
                     SSRSLWPARTVHVECETLNQVRESLEAGADALLLDNMTPTSIISCIAEVHAHGERHGT
                     RPLVEASGGITLDRVADYAATGVDCISTSALTNGAPSLDLGLDLDPDLQRGAPA"
     gene            complement(2037..2534)
                     /gene="folK"
                     /locus_tag="QGG16_01860"
     CDS             complement(2037..2534)
                     /gene="folK"
                     /locus_tag="QGG16_01860"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HJP24051.1"
                     /translation="MTHRALLALGSNLGDRRALLQGAVDGLPDVVAVSDVYETSPVGG
                     PDQGSYFNAVVRLETDLGARALLEVAQRCEAAAKRVRLERWGPRTLDVDLLWVDGEEV
                     DQPDLVVPHPRMFERMFVLVPLRDVAADLVADPLLDLLTEGSDGCDEITSLGALLTVG
                     FSSAS"
     gene            complement(2531..2890)
                     /gene="folB"
                     /locus_tag="QGG16_01865"
     CDS             complement(2531..2890)
                     /gene="folB"
                     /locus_tag="QGG16_01865"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR00526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HJP24052.1"
                     /translation="MSDRIELRGLRVVAICGVLPEEKTRRQPFEVDLDVHADLSTASV
                     SDDLADTVDYGGLTGLVAGIADGESFDLLERFAGRIADAVLGIVGVDAVTVVVRKLRP
                     PVPVDLATSGVRIHRTS"
     gene            complement(2887..3420)
                     /locus_tag="QGG16_01870"
     CDS             complement(2887..3420)
                     /locus_tag="QGG16_01870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24053.1"
                     /translation="MVMRGKWAEGIVPRGFTWIVKDRIAVSERPGGVGEGHRRVRRQE
                     EIIWIRENGFQTVLSLLASDHNLHNYDDFDQSWVHLPFSGATDGVARLEEVCRAIDEH
                     SAEGRCVLVHREELNDVVCGVMGAWLLWSGLVAAGPQAISFAERLTERPLGTVGREIV
                     GLVAPADPPASEDGDAG"
     gene            complement(3446..4228)
                     /gene="folP"
                     /locus_tag="QGG16_01875"
     CDS             complement(3446..4228)
                     /gene="folP"
                     /locus_tag="QGG16_01875"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR01496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HJP24054.1"
                     /translation="MGVLNVTPDSFSDGGRYLDLAAAVAHGRAMVDEGACIVDVGGES
                     TRPGADPVGEEEELARVVPVIEALAADPVVTAGLVRLSIDTRHAAVAVAAVAVGASII
                     NDVSAGLHEVAADLGVGWVAMHMQGDPRTMQQEPVYDNVVAEVQTFLLDRAAVARTAG
                     VPEVWIDPGIGFGKTTAHNMALVRHIDVLVASGWPVVLGVSRKRFLGELTAASDGDHR
                     VTPPEDRAEAGVAMATWSFARGVQIVRAHDVRATVGAARVVG"
     gene            complement(4258..4842)
                     /gene="folE"
                     /locus_tag="QGG16_01880"
     CDS             complement(4258..4842)
                     /gene="folE"
                     /locus_tag="QGG16_01880"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HJP24055.1"
                     /translation="MRFEVDLPRIEAAVAEILEAIGEDVTRDGIRETPARVARMYAEV
                     CSGMHEEPADHLIKTFDVDHDEMVMVRDIPLYSLCEHHLVPFFGVAHVAYIPRRGGMI
                     TGLSKLARLVEGYARRPQIQERLTSQVADAIQRTLDPQGTLVVIEAEHLCMSMRGVQK
                     PGAETVTSAVHGVFRDEVSTRLEAMRFIESNRRR"
     gene            complement(4839..5453)
                     /gene="hpt"
                     /locus_tag="QGG16_01885"
     CDS             complement(4839..5453)
                     /gene="hpt"
                     /locus_tag="QGG16_01885"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016292428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006166 - purine ribonucleoside salvage
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HJP24056.1"
                     /translation="MASDSSAAPDPLTVGRYTASSVMVSAADLKARVQALGEEITADY
                     AGREPLLVGVLKGAFMFMSDLARSIDLPVEFDFMAVSSYGHSTRSSGVVRIVKDLDLD
                     LAGRDVILVEDIIDSGLTLNYLRRNLLARNPASLEVCALLVRENHKVDESILRYEGYR
                     VPSDFLVGYGLDVDEKFRNLPDIRIVDVAPEESAADPTVARSPA"
     gene            complement(5464..>5787)
                     /locus_tag="QGG16_01890"
     CDS             complement(5464..>5787)
                     /locus_tag="QGG16_01890"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24057.1"
                     /translation="DPVPLLARHATLAGEATGLLAGLVVDVDPADVRSVADLPDDLLR
                     LAVRRWLTVQLTGPIAGHPTGPPPDQASVDRVLDVVRGRVVATEVAGGHRVRRSAGFL
                     VFEPR"
BASE COUNT         1016 a         2020 c         1885 g          866 t
ORIGIN      
        1 ggtgaccacc acgccggtct cctcgccgtc ggccagatcc gcgtagtcgg ccaccacagc
       61 gcccgcggtg gtcgtcggat cgaaccggta cggcacctgc tcctcaaggc caggctcctc
      121 ggatacctgc tcgtcggtca taggtttcgc tcgtggacga gacggagacc gtgcagggtc
      181 aggaacggtt cgacgtgctc aatggtcgcc gtcgacgggg cgatcaggtg ggctagacca
      241 ccggtggcta ccaccgtgca gccacccaac tcctcgcgga accgctcgac catgccgtcg
      301 atctgagcgg cgaagccgta gacagcgccc gactgcagcg actcgacggt gctcttgccg
      361 atcacgttgc ggggttcggc caactccacg gcccgcagtg ctgacgctcg gccgaacagg
      421 gcgtcgaggc tcacttccac accgggggcg atggccccgc ccaggaactc gccgtcggcg
      481 gagatcacgt cgaagttatt accggtaccg aagtcgacga ccaccgtcgg gccaccatag
      541 agatcgtagg cccccaccgc gtttgcgatc cgatcggcgc cgacctccct ggggttgtcg
      601 tagaggatcg gcatgccagt tttcacacct ggtccgatga ccaccggttc gaagtccacg
      661 tagcggtcga tcatggttcg aaggctggcc agcacccggg gcacaccggc acatatggcc
      721 acgccggtga cctgcccctc gaggtcgtgg ccgccctgac gtagcaggtt gcggatgagc
      781 accgcgtgct cgtccgccgt ccggtcatgg tcggtacgga tccgccagtg gtcgaccagc
      841 ccggaatcgg ccgcggcgac cggggagcca acctcgtaga ggccgagcac cgtctgggtg
      901 ttgcccacgt caatggtcag cagcatcagg ctggcgcccc tctctgaaga tccgggtcga
      961 ggtccagacc aaggtccaga gacggcgccc cgttggtcag ggcgctggtc gagatgcagt
     1021 ccactcctgt cgccgcatag tcggctaccc ggtccagggt gatcccaccg gatgcctcga
     1081 cgagcggtcg cgtgccgtgg cgttcgccat gggcatgcac ctcggcgatg cagctgatta
     1141 tcgatgtggg ggtcatgttg tcgagcagca gcgcatcagc gccggcctcc agcgattcgc
     1201 ggacctggtt gagagtctcg cattcgacat gcacggtacg cgccggccag agcgaacgcg
     1261 atgacgccac ggcagacgct atgtcggtgc cggtgaggtg gttgtccttc aacatgaccc
     1321 agtggctgag gttggtccgg tggttccatc ccccgccggc ccgcacggcg gcccgctcta
     1381 gtgctcggag gcccggcgtg gtcttacggg tgtcccagat ccgagtggca ccagccccct
     1441 cgacccagag ggcggtggtg gtggccaccc cggagagatg acagagaaag ttcaacgccg
     1501 tgcgctcggc ggtcaggatc ggggccagcg gaccccgcac ggtggccacc acgtcgccgg
     1561 gagcgatccg gtcaccgtca gcacgcagcc agagaacctc gatggcgtcc gacacctgtg
     1621 caaaggcctc cgtggcgcac gctgagccgg ccagtacccc gtcgtcccgg ctagctagca
     1681 ctccgtcggc catcgcgtcg gccggtacga gcgacgcgct gaggtcaccg tcgggcgtga
     1741 gatcctcatg gagggccagc accaccgcgt cggctacctc gtcggcctgc ggctcgaggg
     1801 aacccgcctg atcggccagg tgggctacca gcgaggaagg cagtcgtcca gccgagctct
     1861 gggggttggg atcatgcacg ggccaagcct gcccggggtc ggtgccggat cggctcatcc
     1921 ggctggcgct ccgacgttgt agatgaggcg agccttcccg aaccggcagg ccaccagtgc
     1981 cccatggatc gaatcaccgg cccaatcgcc accgatgatc cggaccgacg gcacggtcag
     2041 ctcgcactac tgaagcccac ggtgagcagc gcgccgagcg acgtgatctc atcgcatccg
     2101 tccgacccct ccgtcagcaa gtcgagcaac ggatcggcca ctaggtcggc ggccacgtcg
     2161 cgcaacggca ccaggacaaa catccgctca aacatccggg gatggggcac caccaggtcg
     2221 ggctggtcga cctcctcgcc gtcgacccac aacaggtcca cgtccaacgt gcgcggaccc
     2281 caacgttcga gtcgcacccg cttggcggcc gcctcacaac gctgagccac ctccaacaag
     2341 gcgcgggccc ccaggtcggt ctcgaggcgc accacagcgt tgaagtacga accctgatcg
     2401 ggtccaccca ccggcgaggt ctcgtagacg tcagagactg cgaccacgtc gggcaggccg
     2461 tcgacggcgc cctgcagcag ggcccgacgg tcacccagat tggaacccaa ggccagcagg
     2521 gcccggtggg tcatgaggtg cggtggatcc gcaccccgct ggtggcgaga tccaccggga
     2581 ccggcgggcg aagcttgcga accaccacgg taacggcgtc caccccgacg atgcccagga
     2641 cggcatcggc gatccgaccg gcgaaccgct ccagcagatc gaacgactcg ccgtcggcga
     2701 tgccggccac tagaccggtc aggcccccgt agtcgacggt gtcagccagg tcgtcgctga
     2761 ccgaggctgt cgacaagtcg gcgtgcacgt caaggtctac ctcaaagggc tggcgacggg
     2821 tcttctcctc agggagcacc ccacagatgg ccaccacccg aaggccccgt agctcgatcc
     2881 ggtcactcac ccggcatccc catcttcact cgcgggcgga tcggccgggg cgacgaggcc
     2941 cacgatctcg cgaccaacgg tgcccagcgg gcgctcggtc agacgctcgg cgaacgagat
     3001 ggcctgcggg ccggccgcca cgaggcccga ccacaggagc cacgccccca tcacgccgca
     3061 caccacgtca ttgagttcct cgcggtgcac caatacgcaa cggccctcag cactgtgctc
     3121 gtcgatggcc cggcaaacct cctcgagacg cgccacaccg tcagtggcgc cgctgaacgg
     3181 caggtgcacc catgactggt cgaagtcgtc gtagttgtgg aggttgtggt cgctggccag
     3241 cagggacaac acggtctgga agccattctc acggatccag atgatttcct cctgacgtcg
     3301 gacccggcgg tggccctccc cgacacctcc cggtcgttcg ctgaccgcta tccggtcctt
     3361 gacaatccat gtgaacccgc ggggaacgat cccctcagcc cacttcccgc gcatcaccat
     3421 gaggacactg tgccgcagat cgtggtcatc cgaccaccct tgctgctccg accgtggctc
     3481 gcacgtcgtg ggcacgcaca atctgcacac cgcgggcgaa cgaccaggta gccatggcca
     3541 cccccgcctc agcccgatcc tccggcggag ttacccgatg atcgccatcg ctggcggccg
     3601 tcaactcgcc gaggaaccgc ttgcggctca ccccaaggac cactggccat cccgacgcca
     3661 ctagtacgtc gatgtgtcgg accaaggcca tgttgtgagc cgtcgtcttg ccgaacccga
     3721 tgcccggatc gatccacacc tcgggtacgc cggctgtccg agccaccgct gcccggtcca
     3781 acaggaaggt ctggacctcg gccaccacgt tgtcgtacac gggttcctgc tgcatggtcc
     3841 gcgggtcgcc ctgcatgtgc atggccaccc atcccacccc gaggtcggct gccacctcgt
     3901 gcagcccagc actcacgtcg ttgatgatgg acgcgccgac cgccacggcg gcaaccgcaa
     3961 cggcggcgtg gcgggtgtcg atcgagagac ggaccagccc ggcggtgact actgggtcgg
     4021 cagccaacgc ctcgatgacg ggcaccaccc gggccaactc ctcttcctcg ccgaccggat
     4081 ccgcaccggg tcgggtcgac tcgcccccga cgtcgacaat gcacgccccc tcgtcgacca
     4141 tggcccgtcc atgggcgacg gccgctgcga ggtcgagata gcgcccaccg tcggagaatg
     4201 agtcgggtgt gacgttgagg acgcccatga cgccgccagt agggccgagg gccatcgtca
     4261 gcggcggcgg ttgctctcga tgaaccgcat ggcctcgagg cgggtggaga cctcgtcgcg
     4321 gaacaccccg tggacggccg acgtcacggt ctccgcaccg ggcttctgta ctccacgcat
     4381 cgacatgcag aggtgctcgg cctcgatcac cacgagcgtg ccctgggggt cgagcgtgcg
     4441 ctggatggcg tcggccacct gggaggtaag ccgttcttga atctgcgggc gacgggcata
     4501 gccctcgacc aggcgagcca gcttggacag gccggtgatc atcccgcccc gacgggggat
     4561 gtaggccacg tgggccaccc cgaagaacgg cacaaggtgg tgctcacaca gcgagtacag
     4621 cgggatgtca cggaccatga ccatctcgtc gtggtcgacg tcgaacgtct tgatgaggtg
     4681 gtcggcgggt tcctcgtgca tgccgctgca cacctcggcg tacatgcgag ccacccgggc
     4741 cggcgtctcg cggatcccgt cacgggtaac gtcctcgccg atcgcctcga ggatctcggc
     4801 caccgctgcc tcgatacggg gaagatccac ctcgaatctc acgcggggga cctcgccacc
     4861 gtcgggtcgg cggcggactc ctcgggagcc acgtccacga tgcggatgtc aggcaggttg
     4921 cggaatttct cgtccacgtc gaggccgtag ccgaccagga agtctgacgg gacccggtag
     4981 ccctcgtaac gcaggatcga ctcgtccacc ttgtggttct cgcgcaccag cagggcgcac
     5041 acctcgaggc tggccgggtt gcgggccagc aagttgcgac gcaggtagtt cagcgtcagg
     5101 ccgctgtcga tgatgtcttc cacgaggatc acgtcacgac cagccaggtc caggtcgagg
     5161 tccttgacga tgcgaaccac gcccgacgaa cgggtggagt ggccatagga cgagacggcc
     5221 atgaagtcga actcgaccgg taggtcaatt gagcgggcca ggtcgctcat aaacatgaag
     5281 gcgcccttaa ggacgccaac cagaaggggt tcgcggccgg cgtagtcagc ggtgatttcc
     5341 tcgccgagag cctgcacccg tgcctttagg tcggcggccg agaccatcac cgaggacgcg
     5401 gtatagcggc ccacggtcag cggatccggc gcggcggaag agtcgctggc catggcggcg
     5461 accctagcgg ggctcaaaga ccaagaaccc cgccgaacga cggacccggt gtccaccggc
     5521 cacctcggtg gctaccacac gacctcgtac cacgtcgagc acccggtcga ccgatgcctg
     5581 atcaggtggc ggacccgtgg ggtgaccggc aatcgggccg gtgagctgga cagtgagcca
     5641 gcgacgcacg gccaggcgga gcaggtcgtc aggcaggtcg gccacggacc gcacgtcggc
     5701 cgggtccacg tcgaccacca gcccagcgag caaaccagtg gcctcgccgg ccagcgtggc
     5761 gtgacgagcc aacaagggca cgggatc
//
LOCUS       DASCMR010000079         5169 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000442605, whole genome shotgun sequence.
ACCESSION   DASCMR010000079 DASCMR010000000
VERSION     DASCMR010000079.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5169)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5169)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5169
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000442605"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1095
                     /locus_tag="QGG16_01895"
     CDS             <1..1095
                     /locus_tag="QGG16_01895"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HJP24058.1"
                     /translation="GADVIKVEQPTVGDPMRRLGTVGPDGDTWWWLSDTRNKESVELD
                     LRSSEGAESFRSMVDRADVLVENFRTGTMERWGLGFESLRERNPRLIQLSVSGYGRTG
                     PLATTAGVARIAESFTGMSHLTGEVDGPPVLSGSSGLADYLAGLYGALGVLLAIRSRE
                     ATGRGQLVDIALYDGIARILDELVPVYAATGLGRERMGPETHRSVPHSNYRTNDGRWL
                     TIACTNDRMFDGLAEVMGRIDLLDDERFATNTARIANRELVNMVVGDWVAVTPVDDVV
                     AGCESAAVPVGLVQAVDAYLAHPQVAARDSVVTVEHPTVGPVRVPGVVPRLLETPGVI
                     RRLGAVLGELSVSEVVERWAAIDRREETGS"
     gene            1092..2291
                     /gene="acdA"
                     /locus_tag="QGG16_01900"
     CDS             1092..2291
                     /gene="acdA"
                     /locus_tag="QGG16_01900"
                     /EC_number="3.13.1.4"
                     /inference="COORDINATES: protein motif:HMM:NF042439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003995 - acyl-CoA dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-sulfinopropanoyl-CoA desulfinase"
                     /protein_id="HJP24059.1"
                     /translation="MSWHLTADQEALRARARELAVEVAAPRAAEVDRTEAYPWDVVEA
                     LRKEGFMGMTVPVAYGGLGLSFLDAVLVVEEMARECGVTGRIAVEANMGAISAVMDYG
                     TEDQKRLAAELVLAGDKPAICITEPEAGSAASEMTTRADRRGNCYVLNGKKHWITGGG
                     VSRLHLVFARVFDEDGNEEGIGGFLAIRDENPGLVIGSREPTMGLRGIPETEILLQDM
                     EVDSAMVLVPPSGFGRGFAELMNAYNSQRVGAATVALGLAAGAHDRSVAYLKKREQFG
                     RPIAEFQGLQWMVADMAIRLEAARSLIWRAATSRGPDTSPFPDPAMAAQAKVFASETC
                     IGVANDALQLFGAAGYSRNSPMERICRDVRMFTIGGGTAQILRTVVASRVLDMKLPQG
                     RGGFMSQ"
     gene            complement(2447..3241)
                     /locus_tag="QGG16_01905"
     CDS             complement(2447..3241)
                     /locus_tag="QGG16_01905"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HJP24060.1"
                     /translation="MSIDLKELELVMSRDRVIFVTGGASGIGRAVAKRLASEGSAVVV
                     ADRDIEGGTETCELIASEGGRAIFQKLDVRDRGSIRSAADDATGQLGGITGLVNCAGL
                     VTMTSLADLSEEEWDLVVDVNLKGTWLVTQEVARDIEAAGGGAIVNISTVEAEVVVST
                     AGYCQVHYNASKGGVKMLTKALAVELAKSSIRVNAVAPGPVATDFVSLEGITSPETLE
                     ALKGRLLIPRIGQPEDIASAVSFLLSDESSWITGVHLPVDGGWLTR"
     gene            complement(3278..4408)
                     /locus_tag="QGG16_01910"
     CDS             complement(3278..4408)
                     /locus_tag="QGG16_01910"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012348.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase family protein"
                     /protein_id="HJP24061.1"
                     /translation="MECHFDVSETRPSWEDGVGVVVGDLERNGEPVPLAPRTVLRNAV
                     GAWELMGFKPKVGIELEAYILEPDPSGGWRPYNAPGSMVYGTGVRTDPEGIMRAIDDT
                     GERLGFRIESINGEFDMGQFEMTLEFDDAMRCADEVFLFRAMAMEVAAQKGHLLTFMP
                     RPIVEYGGNGLHVNLSLEDSSGNNAMLDPSTPDGLSTLAKRCIAGQLHHMPAMAALCA
                     PIANSYKRLRPGQISGYWKNWGYDHRSATVRVNPERDASTRLENRMPDGAASTHSAIA
                     AVLTASRLGVEASLSCPDAETGDALETASTTEHTPDHLGAAIEALRADTVFTAAIGPE
                     MVDQYLVIKETEWGKYLAANGSWEETTDRFTEWEAQTYLPYL"
     gene            4725..>5169
                     /locus_tag="QGG16_01915"
     CDS             4725..>5169
                     /locus_tag="QGG16_01915"
                     /inference="COORDINATES: protein motif:HMM:NF013231.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HJP24062.1"
                     /translation="MPRAFAAGDDELVEAERLIRDRMAELDLDLLSLAAVSNVFRTAT
                     AVRNHMERDVLRRHQLSWSAFTVLFVLRIWGSQESRRLAGEAGISGGTLTGVLDTLER
                     KGFAERRAVPEDRRRVEVILTPAGNKVVEEVMPAFNREEALVTGDL"
BASE COUNT          917 a         1502 c         1650 g         1100 t
ORIGIN      
        1 ggtgccgacg tcatcaaagt cgagcaaccc accgtgggtg accccatgcg gcgccttggc
       61 acagtgggcc ccgatggcga tacttggtgg tggctgagcg atacccgcaa caaggagagc
      121 gtcgagcttg acttgcggag ttccgagggg gccgagtctt tccggtcgat ggtggatcgg
      181 gccgacgttc tggtcgagaa ctttcggacc gggaccatgg agcgctgggg ccttggcttt
      241 gagtcgctcc gtgagaggaa cccgcgtcta atccagttgt cggttagtgg ctatggccgc
      301 accggcccgt tggccaccac cgccggtgtc gctcggatcg ccgagtcgtt cacaggcatg
      361 tcccacctca ccggcgaggt ggacgggccg cccgtccttt ctgggtcttc gggactggcc
      421 gactacctag ccggcctcta cggggctctc ggggtcctat tggctattcg gtccagggag
      481 gccaccgggc gtggccaact ggtcgatatc gccctttacg acgggatcgc ccgcatcctt
      541 gatgagttgg ttccggtcta cgcggcgacg ggacttgggc gtgagcgaat ggggcctgag
      601 actcaccggt ccgtgccaca cagcaactac cggacaaacg acgggcggtg gctgacgatt
      661 gcctgcacca acgatcgcat gttcgatggt ctggctgagg tcatgggtcg gatcgacttg
      721 ctcgacgatg agcggttcgc caccaacacc gctcgcattg ccaaccgtga actggtcaac
      781 atggtggtcg gcgactgggt ggccgttacc ccggtggacg acgtggtggc cggttgcgag
      841 tcagcggccg tgccggtggg actagtccag gcggtagacg cgtacctggc ccaccctcag
      901 gtggcagcac gggactcggt tgtcacggtg gagcatccga cggtcggacc ggtgcgtgtc
      961 ccgggtgtag tgccccgcct gctggaaact ccgggcgtca tccgcaggct tggtgcggtt
     1021 ttgggcgagc tgtcggtatc cgaagtggta gagcgttggg cggccattga ccgccgagag
     1081 gagactggat cgtgagttgg cacctgaccg ctgatcaaga ggccctccgg gcccgtgccc
     1141 gggaactggc cgtcgaggtc gccgcccccc gggcagctga agtggaccgg accgaggctt
     1201 acccctggga tgtggttgag gcccttcgca aggagggatt catgggcatg acagtcccgg
     1261 tggcctacgg cggtctgggc ctttcgtttc ttgatgccgt gcttgtggtg gaggagatgg
     1321 ctcgggaatg cggcgtgacg ggacgtatcg cggtggaggc aaatatgggg gccatctcgg
     1381 cggtcatgga ctatggaacc gaggaccaga agcgtttggc tgcagaactg gtgctagctg
     1441 gggataagcc ggcgatctgc ataaccgagc ctgaggcggg tagcgcagct tccgagatga
     1501 ccactagagc tgatcggcga ggcaactgct acgtcctcaa tgggaagaag cactggatta
     1561 ctggcggagg cgtgtcgcgc ctccacctag tgtttgcccg ggtctttgac gaggacggga
     1621 acgaggaagg gattggcggc tttctggcca ttcgggacga gaacccaggt ctcgtcattg
     1681 gaagccgaga accgactatg ggcctgcgag gtatcccgga gacggagatc ttgcttcagg
     1741 acatggaggt ggactccgcc atggtgctcg ttcccccgtc tggctttgga cggggatttg
     1801 ccgaactcat gaatgcctac aacagtcagc gtgtgggcgc cgccacagtg gctcttggcc
     1861 ttgccgccgg tgctcacgac cgctcggtgg cctacttgaa gaagagagaa cagttcggcc
     1921 gaccgatcgc tgagttccaa ggcttgcaat ggatggtggc cgacatggct attcggctgg
     1981 aggcagcgcg gagcttgatc tggcgggcag ctacctctcg gggccccgat accagtccgt
     2041 tccccgatcc agccatggcg gcccaagcca aggtcttcgc atccgaaact tgcatcggag
     2101 ttgccaatga cgccctgcag ttattcgggg ccgccgggta ctcgcgcaac agcccgatgg
     2161 agcggatttg ccgagatgtg cggatgttca cgatcggtgg cggaacggca cagatcctgc
     2221 ggaccgtcgt ggcttctcgg gtactggaca tgaaacttcc ccaaggaaga ggaggcttca
     2281 tgtcacagta gatccggttc ggagccgagg tcgaaatggc agggaatcgg tccgacccgg
     2341 ctcatggggt gaggttgatg ttgggttgtc gcttccagcg ttagctgacg gcgtcaggcc
     2401 tcggtgggga gagttatgcg gtgtttcccc aaagcccact tgtggcctag cgggtcagcc
     2461 agcctccgtc tactggaagg tgcactccgg ttatccacga cgattcgtcg gagaggagga
     2521 atgacaccgc cgaggcgatg tcttcaggtt gaccgattct tgggattagc agtcttccct
     2581 ttagcgcttc gagcgtctcg ggtgaggtga tgccctccag ggacacgaag tcagtggcga
     2641 ccggcccggg agcgacggcg tttactcgaa ttgaagactt ggccaactcg accgcaaggg
     2701 ctttggtgag catcttcact ccaccctttg acgcgttgta gtggacttgg cagtagccgg
     2761 ccgttgacac caccacttcg gcctcaacgg tggagatatt cacgattgct ccgccgccag
     2821 cggcttcgat atctctcgcc acctcttggg tgacaagcca agttcccttg aggttcacat
     2881 cgacgaccag gtcccactct tcttcggaca gatcggccag agaggtcatc gtgacgaggc
     2941 cggcgcagtt cacgagtccg gtgattcctc ccaactggcc ggttgcgtcg tctgcagcgg
     3001 accgtattga gcctcgatct cggacgtcca acttctggaa gatcgcgcgc cctccctctg
     3061 aagcgatcaa ttcgcaagtc tcagtaccgc cttctatgtc cctgtcggcc actacaacgg
     3121 cggaaccctc acttgcgagt cgtttcgcga cggccctgcc gatcccagac gcacctccgg
     3181 taacgaagat cactctgtct ctgctcatga caagctccag ttccttcagg tcgattgaca
     3241 tcaccgatgt tcaagagagg acacagattc cttgctgcta gaggtagggg aggtaggtct
     3301 gtgcctccca ttccgtaaag cgatcggtcg tctcttccca actaccattc gccgccaggt
     3361 acttgcccca ctcggtttcc ttgatgacga ggtattggtc gaccatctct gggccaatcg
     3421 cggctgtgaa caccgtgtca gcgcggaggg cctcgatggc agcacccagg tggtcgggtg
     3481 tgtgctctgt ggtcgacgca gtctccaacg cgtctccggt ttcagcgtct gggcaagaaa
     3541 ggctggcttc cacacccagg cgcgatgcgg taaggactgc cgctatcgcc gaatgggtgc
     3601 tagcggcacc gtcgggcata cggttttcga ggcgcgttga tgcgtcgcgt tccggattga
     3661 cccgtaccgt ggcgctgcgg tggtcgtagc cccagttctt ccaataacca gaaatctggc
     3721 caggccttag gcgcttgtag gagttggcta ttggagcgca tagcgccgcc atcgctggca
     3781 tgtggtgcaa ctgtccggct atgcagcgtt tggctagcgt tgaaagtcca tcaggagtgg
     3841 aaggatccag catcgcgttg tttccggaac tgtcctccag gctcaagttg acgtgcaggc
     3901 cattacctcc gtactccaca attggtctcg gcatgaaggt aaggaggtgc cctttctggg
     3961 ccgctacctc cattgccatt gctctaaaaa ggaacacctc atctgcgcat cgcatcgcgt
     4021 catcgaactc gagggtcatt tcaaattggc ccatgtcgaa ttcaccattt attgattcga
     4081 tccggaagcc caatcgctcg ccggtgtcat cgatcgcccg catgattcct tctgggtcag
     4141 tacgcacgcc agtgccgtag accattgagc caggtgcgtt gtaggggcgc catcctccgc
     4201 tggggtccgg ttccaagatg taggcctcaa gctcgattcc caccttcggc ttgaagccca
     4261 tcaactccca ggcgccgact gcattgcgaa gcacggttct cggcgccagg ggcacgggct
     4321 cgccgtttcg ttccaagtcg ccgacgacga caccaacgcc gtcttcccag cttggccttg
     4381 tctctgaaac gtcgaagtgg cattccatgt caggcattcc ctcgaggaat cccgttccgg
     4441 gcgtaggtcc catatctcgg tcgtagccca gagagaagac gctgagacaa tgtcgggtgc
     4501 cccgctctgc gagacgggca ggcaggtatt tgccgcgggc caggttcagg tggtctggcc
     4561 acagaactcg gatcctttga tattcctctg ttcccattac ttagcctcgc tcgtctcttt
     4621 tgtcggagtc tcggtgtgcc accaacccga agtatgccca gcgggcagtt ccggcaagaa
     4681 atccgtctgg gagattgttc ggttccaaat agtagtgtcc acatatgccc cgggcctttg
     4741 ctgcaggcga cgacgaactt gttgaggccg agcggctgat tcgcgatcgc atggcggaac
     4801 tcgacctcga cctgctgtca ctggctgccg tctccaatgt gtttcgcaca gcgactgctg
     4861 ttcgaaatca catggagcgc gacgtgcttc gccggcacca actctcgtgg agcgcattca
     4921 cggtgttatt cgtgttgcgc atctggggct ctcaggagtc gcgtcggctg gcaggtgagg
     4981 ctgggatctc tggcggcaca cttactgggg tgctcgacac actcgaacgg aagggctttg
     5041 ccgagcggag ggcagtaccc gaggatcggc gccgtgttga agtgattctc actcccgccg
     5101 ggaacaaggt ggtcgaagag gtcatgcccg ccttcaatcg tgaggaggcc ttggttaccg
     5161 gcgatctca
//
LOCUS       DASCMR010000080        10113 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000445014, whole genome shotgun sequence.
ACCESSION   DASCMR010000080 DASCMR010000000
VERSION     DASCMR010000080.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 10113)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10113)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10113
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000445014"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(94..2511)
                     /locus_tag="QGG16_01920"
     CDS             complement(94..2511)
                     /locus_tag="QGG16_01920"
                     /inference="COORDINATES: protein motif:HMM:NF013434.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJP24063.1"
                     /translation="MPDHTRVVVVGGGIVGASVLYHLAKEGWTDALLIEKAEFTSGST
                     WHAAGQVTHSVSSYTLAFMRKYATELYAELEAETGVATSWHETGSFRVAYEPIEVDWL
                     KGQLGVGAYAGLEMDWVGPEVVAEHHPLYDVSNVVGAIWTPRDGHVDPSGATNAMLTG
                     ARNRGASTSRRNRVLEINRRPDGDWDVVTEQGTVTCEHVVNAAGCYADRVARMAGLRV
                     PMANALHAYVITEPVPEITALDRELPVMRDDYLSGYIRQEQESGLIGIYEQVGAEAAW
                     NDQPGWELENPLFPIDYDIIGDRLMRAFECMPCLEPRGIKQTIRGAITHTPDGEAMLG
                     MSGIPNFWMACGAQVGLADGPGLGRELARWMVHGETVLSVRSYDPRRFGFVPDGDYGR
                     EKGVEDYMYRHQTPVPGLEHPHLRPLKATPAYERQAELGAVFTQVYGWERPKWYPGAA
                     GLPVEDDVGFRHVRWFEPVREEVRAVREGVALLDMTAFAKFDLMGPDAFKVLDGLCAN
                     RLPKVGRIGLNYFLTPTGRVESEMTVTRLADDHFYLVSAAVGELKDREYMTTHWPTGL
                     DAILTTVSEAFGVLSVVGPSARDLLAGCTAADVSNRAFPWLTAQQIIVCGVEVRALRV
                     GFVGELGWELHAPLADMGTLYDGLWAAGTDLGVVNAGHHAVNCLRMEKGYRTSRDMTH
                     DVDPVEAGLGFFIKRDKGDFVGRDALLARDEQSRRWASAYLEVECDIAECIGGEGVFR
                     GDRAVGLTSSGGHGYTTGRVYAFAFVSPDDAVPGTDLEVMILGDRYPARVLAEAVYDP
                     GNERLRS"
     gene            2598..3515
                     /locus_tag="QGG16_01925"
     CDS             2598..3515
                     /locus_tag="QGG16_01925"
                     /inference="COORDINATES: protein motif:HMM:NF013539.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HJP24064.1"
                     /translation="MNATSTASKPLSSKKSLSSNELLDRLADAYNDLTPQVRQAARHI
                     LDRPEQVAVLSMRQLAEAAGVKPNTLVRLARAVGFDGYEDLRDPFRHEVTAPGTSYPD
                     KARWLQTLAGAEHHGDLLADLASSNLGIVEQVFEDLDTVELQTVADTILAAPRTGVFG
                     VGALLPLARHFCYVGSMAVPGLWTLPTNEGLPIDDIARMGAGDVLVAMTFAPYRAEIV
                     EATRLARARDITVVTVTDSRTAPPALDADHVFTTPVETPLFFASVLGVVALLETLLAF
                     MVADSRTEAAEAIDQFHRHRRAAGVYVEE"
     gene            3520..4626
                     /locus_tag="QGG16_01930"
     CDS             3520..4626
                     /locus_tag="QGG16_01930"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF012382.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HJP24065.1"
                     /translation="MDLHLANPNLKNPEFYVPGLPADWVTAHYGIPADEVAKLGSAEN
                     PFGPSPKAMASITAELGNVHLYSPWTAEPLREALAAKYGYTPENFVCGSGETEVIALI
                     IRAFAEPGGQVLMTRPCFPMYHLFAEAEGRHPVYIDTPTMTCEVDAYIDAIGPDTRIV
                     FVTNPHSPSGTWLEEADVRRIVEAAPHALVALDEAYVHYSDTPGYIHLAAEYDNLIVL
                     RTFSKAFGLAGLRLGFGVAHPDLIPPLLAVKPTWNVGRLQIAGGIAALTDDEHVDRTI
                     AAILEGKAHVTARFGELDRFRLVPGTRSNFMLIEILDPDTDSTLVFEGLLERGVIVKD
                     GSVSFRGLEKRYLRSDINLPHRMDHLVDALADLP"
     gene            4671..5726
                     /locus_tag="QGG16_01935"
     CDS             4671..5726
                     /locus_tag="QGG16_01935"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF013044.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HJP24066.1"
                     /translation="MSSYRRALSGDWYTDPVVFADELVSIFARTWQLVGHVGQLAEPG
                     DYLTATVGDQGVAVTRLADGSLHAMYNVCQHRGHELLTDDAGHTSSLTCPYHAWNYDL
                     DGRLLHARGESVGEICVPSVRLDTLGGFLWVNLDDDAASLPDTVPDIEDELLAVAPSA
                     ASRTLTHRRTHLISANWKLAVENYNECYHCPNVHKSFTKGVVSPGSYRIAGRGQAIRH
                     SAEAPASTGYSLAEGGQAYESFYVFPVSSIQCYPGEVLNTFRWVPLAVDRTLLIREWW
                     FDGDTPTAEQDEIIDLDWRTTVSEDFSIMDSVQRGLRSRGYVPGPLIQRPDGVATVHS
                     EDAVPHLHDLVRAALGR"
     gene            5723..7102
                     /locus_tag="QGG16_01940"
     CDS             5723..7102
                     /locus_tag="QGG16_01940"
                     /inference="COORDINATES: protein motif:HMM:NF015905.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HJP24067.1"
                     /translation="MTATRELGGFLTDPELRISDDHIDRAVDCLVDTLGCIVFGAGQP
                     WSQRAAAHARRTGGDGGPCPVVGSGFATSAPMAAFANGASGHAFELDDVHEEAISHPG
                     AVVIPAVLAIAAETGASGLAVLEAIVVGYEAMGRAGIAVGPASHMLAGYHPTGQSGVF
                     GSAAAVGRLLDFGSGMMTHALGIAATFSSGTTEFNQSGGDTKRLHAGRAAEGGLTAAL
                     LAADGFDGPADGLAGRYGFCRISTTEPDVNLLTDNLGDRWMIDEITVKPYAACSDIHP
                     LIDAALEIRGRGVRADDIAEIHAEVPTKAAEQNSQDGTTSVMASQYSGPFNVAAAFLA
                     DPSDPSTYTAERIADPALADLQARVVSMAAAEWCDASYAWKMAGGLRVVCTNGTEHHV
                     RVCGQRGSMHQPLTSDELEAKFRLLVGNRIDADVMIATARDLRHAPDLTSFWTALANS
                     PNEPQEDTC"
     gene            7096..7890
                     /locus_tag="QGG16_01945"
     CDS             7096..7890
                     /locus_tag="QGG16_01945"
                     /inference="COORDINATES: protein motif:HMM:NF036686.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24068.1"
                     /translation="MLTTDITRKRYIGYSGFVTTPRYFDDVVQQFTAVAPEGVGAMQR
                     ALHIPGYEYHLNDRTRNFDLLDEAATCLAESHCQVIGQAGSNWVHCTGTTPDQITRFC
                     DDLSERIGARFLMAGHCIVEALRHLGARRIAVSNAYYRDDWRDGINRYLEQAGFEILS
                     SGHMRDQGLYATLEEQLEVEDQTVWDHPDRDVMESIRLAHEAAQDADVVVQTGAGFRT
                     APHVPALEAMFDKPVVASDNALFWGMLRELDLGIPVRDHGLLLGTL"
     gene            7891..8622
                     /locus_tag="QGG16_01950"
     CDS             7891..8622
                     /locus_tag="QGG16_01950"
                     /inference="COORDINATES: protein motif:HMM:NF040370.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24069.1"
                     /translation="MHTILALWALPRSRSTAFEQMMRERKDHHCLHEPFGEAWYLGED
                     RRCPPQRAGGPKPGLTSASVWSDLRAAAETGPVFVKEFPHYVTHMADDDFLDHFNHSF
                     LIRDPAKTLPSMYDKWPDFEIAETGFAEQRSLFDRLTEHRGTPPPVIDAEDLMADPDG
                     ITSAWCDAVGIPFLAEALHWAAPREEAMSWYDSGSWHDNLRASTGLTSQQRDYVSIDH
                     NDLLRHAYSTCRPHYEALFAHRLMA"
     gene            8629..9888
                     /locus_tag="QGG16_01955"
     CDS             8629..9888
                     /locus_tag="QGG16_01955"
                     /inference="COORDINATES: protein motif:HMM:NF016328.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Coenzyme F420 hydrogenase/dehydrogenase, beta
                     subunit C-terminal domain"
                     /protein_id="HJP24070.1"
                     /translation="MHRTANSIAEVVTSGLCVGCGLCETVTQGRIPMVMTPTGSLRPT
                     PAERFSPEEEAVLLAACPGVVAAPRQTPDLEADPVWGAFSTMRYGWAGDPKVRFRAAT
                     GGVLTALGMHLIDTGTVDTVLHVGADPKYPMRSHWVLSQTAKEVLANTGSRYGPTAPL
                     AGLGPVLDRAEPFAVIAKPCDLGALHAHAASDPRVDDLCVARLALVCGGQSRLEKSAD
                     VLAEVGVDEDEVSLFRYRGHGNPGPTRVETTDGRSFERTYLEMWEDEAGWKVETRCKF
                     CPDALGEAADIAAADVWPGGAPTGDDEGFNGIIVRTPTGEALVRSAVEAGALVLGRPI
                     DPREFDELQPHQVRKKEALASRFAGLAEAGIPTINTTGLRVDLLGRRLNPEARLAEQA
                     GTLRRATEGRFTEPLPASPTDRPSDHA"
BASE COUNT         1765 a         3640 c         3083 g         1625 t
ORIGIN      
        1 ccgggtgatc ctcaaatcac accccctggt cgtcccacgc cggtctgaac tttccccaac
       61 tctggagccg gccgattccg ggccgatcca cccctagctc cggagccgtt cgttcccggg
      121 atcgtagacg gcctcggcga gcaccctggc cgggtaccgg tcgccaagaa tcatgacctc
      181 caggtcggtg ccgggcacag cgtcgtcggg tgacacgaag gcgaaggcgt acaccctgcc
      241 ggtggtgtag ccgtgaccgc ctgacgaggt gaggcccacg gcccggtcgc cacgaaacac
      301 cccttcaccg ccgatgcact cggcgatgtc gcactcgacc tccagatatg ccgacgccca
      361 gcggcgggac tgctcgtcac gggctagcag agcgtcccgg ccgacgaagt ctcccttgtc
      421 acgcttgata aagaacccga ggccggcctc gacagggtca acgtcgtggg tcatgtcccg
      481 cgaggtgcgg tagcccttct ccatgcgcag gcagttgaca gcgtggtggc cggcgttgac
      541 gaccccgaga tcggtaccag cggcccacag accgtcatac agggtgccca tgtcggccag
      601 cggggcatga agctcccagc ccaactcgcc gacaaagccc acccgcaggg cccgcacctc
      661 caccccgcac acgatgatct gctgagcggt cagccacggg aaggccctgt tggacacgtc
      721 agcagcggtg catccagcca gcaggtcgcg agccgacggc ccgaccaccg acagcacacc
      781 gaaggcctcg gaaactgtgg tcaggatggc gtcgagcccg gtcggccagt gggtggtcat
      841 gtactcgcgg tccttgagct cccccaccgc agccgacacg aggtagaagt ggtcgtcggc
      901 caagcgggtc accgtcatct cgctctcgac tcgtccggtt ggggtgagga agtagttgag
      961 gccgatgcgg cctaccttcg ggagccggtt ggcgcacagc ccgtccagta ccttgaaggc
     1021 gtccggaccc atcaggtcga acttggcgaa cgctgtcatg tcgagcagcg cgaccccctc
     1081 ccgcacggcc cggacctcct cccgtaccgg ctcgaaccag cgcacgtgcc taaacccgac
     1141 atcgtcctcg acgggtagtc cggcggcccc cggataccac ttagggcgct cccagccgta
     1201 cacctgggtg aacacggcac ccagctcggc ctggcgttcg taggccggcg tggccttcag
     1261 ggggcggaga tgagggtgtt cgaggcccgg caccggtgtc tggtgccggt acatgtagtc
     1321 ctcgacgccc ttctcccgcc cgtagtcgcc gtcgggcacg aacccaaacc ggcgcgggtc
     1381 gtagctccgc acgctgagaa ccgtctcgcc atgaaccatc cagcgggcta gctcccggcc
     1441 cagcccgggg ccgtctgcca ggccgacctg ggcgccgcaa gccatccaga agttggggat
     1501 gcctgacatg ccgagcatgg cctcgccgtc cggggtgtgg gtgatggccc ctcggatggt
     1561 ctgcttgatg cctcggggct cgaggcacgg catgcactcg aaggcccgca tgagccggtc
     1621 gccgatgatg tcgtagtcga tcgggaacag cgggttctcc agttcccacc ccggctggtc
     1681 attccaggcc gcctcggctc cgacctgctc gtagatgccg atgaggcccg actcctgttc
     1741 ctggcggatg tatcccgaga ggtagtcgtc gcgcatgacc ggcagctcac ggtcaagggc
     1801 ggtgatctca ggcaccggct cggtgatgac ataggcgtga agggcgttgg ccatcggcac
     1861 ccgcaggccg gccatgcggg ccacccggtc ggcgtagcag ccggcggcgt tgaccacgtg
     1921 ctcgcaggtg acggtgcctt gttcggttac gacgtcccag tcgccgtccg ggcgtcggtt
     1981 gatctcgagg acccggttgc ggcgagaggt ggaggcaccc cggttgcggg ccccggtgag
     2041 catggcgttg gtggcgcctg acgggtcgac atggccgtcc cgtggcgtcc agatggcgcc
     2101 cacgacgttc gacacgtcgt agagagggtg gtgctcggcg accacttcgg ggcctaccca
     2161 gtccatctcg agcccggcgt aggcgccgac ccccagttgg cccttcaacc agtcgacctc
     2221 tatgggctcg taggccaccc ggaaggagcc tgtttcgtgc cacgaggtag ccaccccggt
     2281 ctcggcctcg agctctgcgt agagctcagt ggcgtacttg cgcatgaagg ccagcgtgta
     2341 actggacact gagtgggtga cctggccggc ggcgtgccac gtggagccgg acgtgaactc
     2401 ggccttctct atgagtaggg cgtcggtcca tccctccttg gcgaggtggt aaaggacact
     2461 ggcaccgacg atgccaccac cgacgacgac gacccgggtg tgatcgggca tggccatgaa
     2521 gggactccca cgaaacgact aacgagatta cggacatttg tccgatctga tttcgagaat
     2581 ggtacacttg tacgatcatg aacgcgacgt ctacggcctc caaaccgctg tcatccaaga
     2641 agtcgctgtc gtcaaacgag ttgctggacc gactggccga cgcctacaac gacctcaccc
     2701 cccaggtccg ccaggcggcc cgccacatcc tcgaccgtcc cgaacaggtc gccgtgctct
     2761 cgatgcgcca actggccgaa gcggccggcg tcaagcccaa caccctggtc cgcctggcgc
     2821 gggctgtggg ctttgatggc tacgaagatc tgcgtgatcc gttccgccac gaggtcaccg
     2881 cccccggaac ctcgtacccc gacaaggccc gctggctcca gaccctggcc ggggccgagc
     2941 atcacggcga cctgctggcc gatctggcct catccaacct tggaatcgtc gagcaggtgt
     3001 tcgaagacct cgacaccgtc gaactccaga cggtggccga caccatcctc gccgcccctc
     3061 gcaccggagt cttcggcgtc ggcgccctgc tgcccctagc ccgccacttc tgctacgtcg
     3121 gctctatggc cgtccccgga ctgtggaccc tccccaccaa cgagggcctg cccatcgacg
     3181 acatcgcccg catgggcgcc ggcgacgtgc tagtcgccat gactttcgcc ccttataggg
     3241 ctgagatcgt cgaagccacc cgcctggccc gtgcacgcga catcaccgtg gtgaccgtca
     3301 ccgacagtcg aaccgcaccg ccggccctcg acgccgacca cgtgttcacc acccccgtcg
     3361 agaccccgct gttctttgcc agcgtgctgg gcgtcgtcgc cctgctcgaa accctgctgg
     3421 cgttcatggt ggccgacagc cgcaccgagg ccgccgaagc catcgatcag ttccaccggc
     3481 accgacgcgc tgccggtgtg tacgtcgagg agtgacccta tggacctcca cctggctaac
     3541 cccaacctga aaaaccccga gttctatgtg cccggcctgc cagcggactg ggtgaccgcc
     3601 cactacggga tccccgccga cgaggtcgcc aagctgggct cagccgaaaa cccgttcggc
     3661 ccctccccca aggccatggc ctcgatcacc gccgagttgg gcaacgtcca cctgtactcg
     3721 ccgtggacgg ccgaaccgct gcgcgaggcc ctagccgcca aatacggcta cacccccgaa
     3781 aacttcgtgt gcggctccgg cgaaaccgaa gtcatcgccc tcatcatccg ggcgttcgcc
     3841 gaaccaggcg gccaggtgct catgacccgg ccgtgcttcc cgatgtacca cctgttcgcc
     3901 gaagccgaag gccgccaccc ggtgtacatc gacacaccca ccatgacctg cgaggttgac
     3961 gcctacatcg acgccatcgg acccgacacc cgcatcgtgt tcgtcaccaa cccccactca
     4021 ccgtcgggca cgtggcttga agaggccgac gtgcgccgca tcgtcgaggc cgccccccac
     4081 gctctggtgg ccctcgacga ggcatacgtg cactactcgg acacgcccgg ctacatccac
     4141 ctggctgccg aatacgacaa cctcatcgtt ctgcgcacct tctccaaggc cttcggcctg
     4201 gccgggctcc gactcggctt cggtgtggcc caccccgacc tgatcccgcc gctgctggcc
     4261 gtcaagccca cctggaacgt gggccgactc cagatcgccg gcgggatcgc cgccctgacc
     4321 gacgacgagc acgtcgaccg caccattgcg gccattctcg agggcaaagc ccacgtcacc
     4381 gcccgcttcg gggaactgga ccgcttccgg ctggtgcccg gcacccgctc caacttcatg
     4441 ctcatcgaaa ttctcgaccc cgacaccgac tccacactgg tgttcgaagg cctcctcgag
     4501 cgaggcgtca ttgtcaagga cggctcggtg tccttccggg gtctcgaaaa gcgctatcta
     4561 cgaagcgaca tcaacctccc ccaccgaatg gaccacctgg tggacgccct agccgacctg
     4621 ccctagcctg cgccggctga gtcgcccctt tcaccgtcga ggagccccca ttgagtagct
     4681 accgccgagc tctctccggc gactggtaca ccgacccggt cgtgttcgcc gacgaactgg
     4741 tcagcatttt cgcccgcacc tggcagctag tcggtcacgt cggccaactc gccgaacccg
     4801 gcgactacct caccgctacc gtcggcgatc agggggtggc ggtgacccgg ctggccgacg
     4861 gctcgctgca cgccatgtac aacgtgtgcc agcaccgtgg ccatgaactg ttgaccgacg
     4921 atgccggcca caccagcagc ctgacctgcc cgtaccacgc ctggaactac gacctcgacg
     4981 gccgcctgct gcacgctcgc ggcgagtcgg tcggcgagat ttgcgtgccg tcggtccggc
     5041 tagacacgct cggtggtttc ctgtgggtca acctggacga tgacgcagcc agcctgcccg
     5101 acaccgtgcc cgacatcgag gacgagctgc tggctgtggc acccagcgcg gccagccgca
     5161 ccctcaccca tcggcgcacc cacctaatca gcgccaactg gaagttggcc gtcgagaact
     5221 acaacgagtg ctaccactgc cccaacgtgc acaaatcgtt caccaagggc gtcgtgtccc
     5281 ccggcagcta ccgcatcgcc ggtcgcggcc aggccatccg ccacagcgcc gaagcgccgg
     5341 ccagcaccgg gtactccctg gccgagggag gccaggcgta cgaatcgttc tacgtgttcc
     5401 cggtgtcatc gatccagtgc tatcccggtg aggtgctcaa caccttccga tgggtgcccc
     5461 tggccgtaga ccgcaccctc ttgatccgtg agtggtggtt cgacggcgat accccgaccg
     5521 ctgaacagga cgagatcatc gacctggact ggcggaccac agtcagcgaa gacttctcaa
     5581 tcatggattc cgtccaacgg ggtctgcgca gtcggggcta cgtccccggt ccgcttatcc
     5641 aacgtcccga cggcgtggcc accgtccact ccgaggacgc agtcccccac ctgcacgacc
     5701 tggtccgcgc tgcgctggga cgatgaccgc tacccgagaa ctggggggct tcctcactga
     5761 ccctgaactg cggatcagcg acgatcacat cgaccgtgcc gtcgactgcc tagtcgacac
     5821 tctgggatgc atcgtgttcg gagccggcca gccgtggagc cagcgggcag ccgcccacgc
     5881 ccgtcgcact ggtggtgacg gtggtccatg tccggtcgtc ggctcagggt tcgctacctc
     5941 ggctccaatg gccgccttcg ccaacggggc gtcaggccac gccttcgagt tggacgatgt
     6001 gcacgaggag gccatctcgc accccggagc ggtcgtcatc ccagcagtgc tcgccatcgc
     6061 cgccgaaacc ggcgcctcgg ggctggccgt cctggaagcg atcgtggttg ggtacgaagc
     6121 gatgggacga gccggtatcg ccgttgggcc ggcatcccac atgctggctg gctaccaccc
     6181 caccggccag tccggggtgt ttggttctgc cgcagcggtt gggcgccttc tggacttcgg
     6241 atccgggatg atgactcacg ccctgggaat tgccgccacc ttctcgtcgg gaaccaccga
     6301 gttcaaccag agtggaggag acaccaagcg actccacgcc ggcagggcgg cggagggcgg
     6361 gttaacggcc gccctactag ccgccgacgg cttcgacggg cccgctgacg ggctggccgg
     6421 cagatatggg ttctgccgga tctcgacaac cgaacccgat gtcaacctcc tcaccgacaa
     6481 cctcggtgat cgctggatga tcgacgagat caccgtcaag ccgtatgcgg cctgcagcga
     6541 tatccacccg ctcattgacg cggccctcga gatccgcggt cggggcgtcc gtgccgacga
     6601 catagccgag atccacgccg aggtgccgac caaggccgcc gagcagaact cccaggatgg
     6661 aaccacctcg gtgatggcgt cccagtacag cggaccgttc aacgtggcgg ccgcctttct
     6721 ggctgacccg tccgacccgt ccacctatac cgccgaacgc atcgccgatc cggcgctagc
     6781 cgaccttcaa gcccgggtgg tctccatggc cgccgccgaa tggtgcgatg ccagctacgc
     6841 ctggaagatg gccggcggcc tacgagtggt gtgcacgaac ggcacggagc accacgtgcg
     6901 ggtatgcggc cagaggggct caatgcacca gcccctcacc tccgacgagt tggaggccaa
     6961 gttccggctg ctggtcggca accgaatcga cgccgacgtc atgatcgcca ccgcccgcga
     7021 ccttcgccat gcgccggacc tgaccagctt ctggacggcg ctcgccaaca gccccaacga
     7081 accccaggag gacacgtgtt aaccaccgac atcacccgca agcgctacat cggctactcg
     7141 ggcttcgtca cgacaccccg ctatttcgac gacgtggtgc agcagttcac ggccgtcgcc
     7201 cccgaagggg taggcgccat gcaacgggcg cttcacatcc ccggctacga gtaccacctc
     7261 aacgaccgga ctcgcaattt cgacctactg gacgaagcgg ccacctgtct ggccgagtcg
     7321 cattgccaag tgatcggcca ggccggcagc aactgggtgc actgcaccgg tacgacgcca
     7381 gaccagatca ccaggttctg cgacgacctc agcgagcgga tcggtgcccg cttcctcatg
     7441 gctggacact gcatcgtcga ggcactacgc cacctcgggg ccaggcggat cgctgtcagt
     7501 aacgcctact accgagacga ctggagggac ggcatcaacc gctatctgga acaggccgga
     7561 ttcgagatcc tgtccagcgg ccacatgcgc gaccagggcc tttacgccac cctggaagag
     7621 cagttggagg tcgaggacca gacagtgtgg gaccacccgg accgcgacgt catggagagc
     7681 atccgcctag cccacgaggc ggcccaggac gctgacgtcg tggtgcaaac cggcgccggc
     7741 ttccggacgg cacctcatgt accggctctg gaagccatgt tcgataagcc ggtcgtggca
     7801 tccgacaacg ccctcttctg gggaatgctc cgcgagctcg acctcgggat ccccgtccgc
     7861 gaccacggcc tactgctcgg gaccctctga atgcacacga tcctcgccct gtgggcgtta
     7921 ccccgctcac gatccacggc cttcgagcag atgatgcgcg aacgaaagga ccaccactgt
     7981 ctccacgaac cgttcggcga ggcctggtac ctcggcgagg accggcggtg ccctccgcaa
     8041 cgggcgggcg gaccgaaacc cgggctgacc tcggcctcgg tctggtccga cctccgggcg
     8101 gccgccgaaa cggggcccgt gttcgtcaag gagttcccgc actacgtaac ccacatggcc
     8161 gacgacgact tcctcgacca cttcaaccat tccttcctaa tccgtgatcc ggccaagacc
     8221 ctgccctcga tgtacgacaa gtggccggac ttcgagatcg ccgagacagg cttcgccgag
     8281 caacggtccc tgttcgaccg actcaccgaa caccggggta caccaccacc cgtcatcgac
     8341 gcggaggacc tcatggccga cccggatggc atcacctcgg cgtggtgtga cgctgtcggt
     8401 atcccgttcc tggccgaggc cctgcactgg gcggccccca gagaggaggc catgagttgg
     8461 tacgacagcg gttcatggca cgacaacctg cgtgcgtcca ccgggctcac ctcccagcag
     8521 cgcgattacg tatcgatcga ccacaacgac ctcctgaggc acgcctactc aacgtgtcgc
     8581 ccccactacg aggcgctctt tgcgcatcgt ctgatggcct gaccagacat gcaccggacc
     8641 gcaaacagca tcgccgaggt cgtcaccagc ggcctgtgcg tcggctgcgg cctctgcgag
     8701 accgtgaccc aaggccgcat tcccatggtc atgaccccaa cgggcagttt gcggcccacc
     8761 ccggccgaac ggttctcgcc cgaagaggag gcagtgttgc tggccgcctg cccgggtgtg
     8821 gtagccgccc cacgccagac gcccgacctt gaagccgacc cggtgtgggg ggccttttcg
     8881 acaatgcgct acgggtgggc cggcgacccg aaggtccggt tccgtgcggc caccggaggc
     8941 gtgttgaccg ccctcggcat gcacctcata gacaccggaa ccgtcgatac ggtgcttcac
     9001 gtcggagccg acccgaaata cccgatgcgc agccactggg tgctgagcca aaccgccaag
     9061 gaggtgctcg ccaataccgg atcccgttac ggaccgactg ccccactagc cggcctgggc
     9121 cctgtcctcg accgggcaga gccgtttgcc gtcatcgcca agccctgtga cctgggagcc
     9181 cttcacgccc acgcggcctc cgacccccgg gtcgacgacc tgtgtgtggc ccgactggcc
     9241 ctggtatgtg gcggccagtc ccgtctcgag aaatcagccg atgtgctcgc cgaagtaggt
     9301 gtagacgagg atgaggtatc tctgttccgc taccgcggcc acggaaaccc cggacccacc
     9361 cgggtcgaga ccaccgatgg caggtcgttc gaaaggacct acctcgagat gtgggaagac
     9421 gaggccggct ggaaggttga gacccgctgc aagttctgcc ccgacgccct tggcgaagcg
     9481 gccgacatag cagccgccga cgtctggccc ggtggggccc caacgggcga tgacgagggt
     9541 ttcaacggga tcatcgtccg cacccctact ggcgaggccc tagtgcggtc agcagtggaa
     9601 gctggcgccc tggtgctcgg taggccgata gacccccgtg agttcgacga gctccaaccc
     9661 caccaggtcc gtaagaagga ggccctagcc tcgcgtttcg ctggcctagc ggaagccggg
     9721 atcccgacaa tcaacaccac cggactgcgg gtcgacctcc tcggtcgtcg tctcaaccca
     9781 gaagcccggc tcgccgagca agcggggacg ctccgccggg ccaccgaagg ccggttcact
     9841 gaaccactgc ccgcctctcc aaccgatagg cccagcgacc acgcctgacc tgttgtcgcg
     9901 ttgggggcct gaaaggttcc ttgactgctt ttccgaggcg atcgccgacc cactgccacg
     9961 cttcgggcag ctcgcacacg tgagcccagt tcacgatccg atcagtgccg ccgtgcccgg
    10021 ccagcacctc ggtgcgcagc gacgccgttg ctgccagctg actgatcgtg atcgtcacca
    10081 accgcgaacc tgccgcccca cgtagtgttg cca
//
LOCUS       DASCMR010000081         3553 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000446274, whole genome shotgun sequence.
ACCESSION   DASCMR010000081 DASCMR010000000
VERSION     DASCMR010000081.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3553)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3553)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3553
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000446274"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(27..560)
                     /locus_tag="QGG16_01960"
     CDS             complement(27..560)
                     /locus_tag="QGG16_01960"
                     /inference="COORDINATES: protein motif:HMM:NF013621.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24071.1"
                     /translation="MRTGVQPGSFDPPTLAHLVIAHAALRHHRLDRVIWTVSRHPLGK
                     DDGRTDVDDRLTVLHSAIADHRWLAAEATDARLVADIADGYDVVIMGADKWHQLHDPT
                     FYGEPGTESAAAMDRALERLPTCAVAPRDGLTVPPEVTLSVPRWVARQSSSDAVAGAP
                     WMALSAARHSGLWLEIR"
     gene            824..2566
                     /locus_tag="QGG16_01965"
     CDS             824..2566
                     /locus_tag="QGG16_01965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HJP24072.1"
                     /translation="MATEEMDGGRALIRALEEEGVDVMFGLPGGAILPVYDPIIDSSI
                     RHVLVRHEQGAGHMAEGYAHATGRPGVAMVTSGPAATNIVTPLCDAYLDSVPMVVVTG
                     QVPYAAIGTDAFQECDTTGITQSITKHNFLVTEAQDIPRTIKEAFHIATTGRPGPVLV
                     DIPKDIVDPVNPRSAMTWHDDVEMDLPGYQPQTAVDVDLIAAAAGLIRVAERPVLYVG
                     GGILKARAADALRALAELTGISVVTTLMARGAFPDSHELCLGMPGMHGNYTAVTAMQE
                     SDLLITLGARFDDRVTGKLDGFAPEAKIIHVDIDPAELGKVRRPDVAIQGDVRVAIEA
                     LVDELSGNGAGDADRSAWRSRISGWQERYPLAYEPWAPGEPLKPQYVIERLRDATPDD
                     TIVTSGVGQHQMWASQYWTFDHPYTWINSGGLGTMGFSIPAAIGAKVAFPDREVWAID
                     GDGCFQMTAQELVTATVENIPIKVALLNNSYLGMVRQWQEMFYDERYSEVSLSSDVPD
                     FKMWAESMGCVGIRVDDPDEVDVAIAKANEVDDRPVVIDFRVAASEKVFPMVPSGAAN
                     SELMVPGFQEGQPR"
     gene            2563..3075
                     /gene="ilvN"
                     /locus_tag="QGG16_01970"
     CDS             2563..3075
                     /gene="ilvN"
                     /locus_tag="QGG16_01970"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990610 - acetolactate synthase regulator
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HJP24073.1"
                     /translation="MNVHEAEHRYHTLVVTVENKSGVLARVASLFARRAFNIESLAVA
                     PTDDEDMSRITVVVDLESAPLDQIVKQLDKLVNVVEIRELGPGQAVERELMLVTVTAE
                     PDRRDEIVEHLDRAGGKVLSLSTDRMMLSLVGPPRRVDEFEDLLREYGIIELQRTGRV
                     ALPVLDDALD"
     gene            3170..>3553
                     /locus_tag="QGG16_01975"
     CDS             3170..>3553
                     /locus_tag="QGG16_01975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HJP24074.1"
                     /translation="MANIYYEKDVDRSAIAERKVAILGYGSQGHAHALNLKESGIDVC
                     VGLRDGSSSAAKASEAGLAVKSLSDASAWADVIMILLPDTDQAAVYEEHIAPNLSAGD
                     ALAFAHGFNIRFDLIAPPADVDVIMV"
BASE COUNT          624 a         1156 c         1154 g          619 t
ORIGIN      
        1 gtgattcccg gctgccggac cgccggttac cggatctcca accacagccc ggagtgtcgg
       61 gcggccgaca gggccatcca cggggcgccg gccaccgcat cgctagatga ctggcgagcc
      121 acccagcggg ggaccgaaag cgtcacctcc ggtgggaccg tcaatccgtc ccgcggggcc
      181 accgcgcagg tcgggaggcg ttcgagggcg cgatccatcg ccgccgccga ctcagttcct
      241 ggttcgccat agaaggtggg gtcatggagc tggtgccact tgtcggcacc catgatgacc
      301 acgtcgtagc cgtcggcgat gtcggccacc aggcgggcgt cggtcgcctc ggcggccagc
      361 caccgatggt cggcgattgc tgaatgaagc acggtcaggc gatcgtccac gtcggtccgc
      421 ccgtcgtcct tgccgagcgg gtgtcgtgac accgtccaaa tgacccggtc gagccgatgg
      481 tggcgcaacg cggcatgagc gatgactaga tgggccaggg tcggaggatc gaaggacccc
      541 ggctgaaccc cggttcgcat gagtcaagtc tcccacgcct gaggttgtgg tccgaggtgc
      601 caccagcgca taattgctaa tcatgcagat cgactccact tcctttgccc gcatccgggt
      661 agtcgtactg ccgtaggcac gcgccccgcc cgcacacggt gggtcccaaa cggttgcgtg
      721 cctcgacctc ccacagcggg aggtcgtttc cacttttcag cccagttcat aaaccagttg
      781 agataccaga ccaggcagcc tttcccccag atccgagttc gacatggcca cagaagaaat
      841 ggacggcggt agagccctca tccgtgccct cgaggaagag ggtgtggatg tcatgttcgg
      901 cctgccagga ggggcgattc tcccggtcta cgacccgatc atcgactcgt ctatccgcca
      961 cgttctagtc cgacacgagc agggcgccgg ccacatggcc gagggctatg cccatgccac
     1021 ggggcgcccg ggtgtggcca tggtgaccag cggccccgcg gccaccaaca tcgtcacgcc
     1081 gctgtgtgac gcctaccttg attcggtgcc catggtcgtg gtcaccggcc aggtcccgta
     1141 cgcggcgatc ggcaccgatg ctttccagga gtgcgacacg acgggcatca cgcaatcgat
     1201 caccaagcac aacttcttgg tcaccgaggc tcaggacatc ccgcggacca tcaaggaggc
     1261 gttccacatc gccaccacgg gtcggccggg tccggtgctg gtcgacattc ccaaggacat
     1321 cgtcgacccc gtcaaccccc gatcggctat gacgtggcat gacgacgtcg agatggacct
     1381 gcctggctac caaccgcaga ccgcggtcga cgtcgacctc attgcggcgg ccgcgggcct
     1441 gatccgggtt gccgagcgcc cggtgctcta cgtgggtggt ggaatcctca aggcgcgagc
     1501 cgccgatgcg ttgcgcgccc tggctgagtt gactggcatc agcgtggtca ccacgctcat
     1561 ggctcgaggt gcattcccgg acagccatga actgtgtcta ggcatgccgg gcatgcacgg
     1621 gaactacacg gctgtcaccg ccatgcagga gtccgatctg ctcattaccc tcggcgcacg
     1681 gttcgacgac cgggtgaccg gaaagctcga cgggtttgcc cccgaggcga agatcatcca
     1741 cgtcgacatc gatcccgctg agctgggcaa ggtgcgccgg cccgacgtgg ccatccaggg
     1801 cgatgtccgg gtggccatcg aggcactggt cgacgaattg tcgggcaacg gtgccggtga
     1861 cgccgatcgg tcggcctgga ggtcgcggat cagcggctgg caggagcgct acccgctggc
     1921 ctacgagccg tgggctcccg gtgagccgct gaagccccag tacgtcatcg agcgtctccg
     1981 tgacgccacc ccggacgaca ccatcgtgac ctccggcgtg ggtcagcacc agatgtgggc
     2041 cagccagtac tggaccttcg accatcccta cacttggatc aactcgggtg gactcgggac
     2101 gatgggcttc tccatcccgg cggccatcgg ggccaaggtg gctttcccgg accgggaggt
     2161 gtgggcaatc gacggtgacg gctgcttcca gatgacggct caggaactgg tcacggccac
     2221 cgtcgagaac attcccatca aggtggcact gctgaacaac tcctacctcg ggatggttcg
     2281 ccagtggcag gagatgttct acgacgagcg ctactccgag gtttctctct cgtccgacgt
     2341 tcccgacttc aagatgtggg ccgagtcgat ggggtgcgtg ggcatccggg tcgacgaccc
     2401 cgacgaggtc gacgtggcca tcgccaaggc caacgaggtc gacgatcggc cggtggtcat
     2461 cgacttccgg gtggctgcat ctgagaaggt cttcccgatg gtgccgtcgg gtgccgccaa
     2521 ctctgaactt atggtgcccg ggttccagga ggggcagccc cgatgaacgt ccatgaggcg
     2581 gagcaccgct accacacgct ggtcgtgacc gttgagaaca agtcaggcgt gctggcccgg
     2641 gtggcatcgt tgttcgcccg tcgggccttc aacatcgagt cgctcgcggt ggcgcccacc
     2701 gacgacgagg acatgagtcg gatcaccgta gtggtcgacc tcgagtcggc cccgcttgac
     2761 cagatcgtca agcagctgga caagttggtg aacgtcgtcg agatccgcga gctaggccca
     2821 ggtcaggccg tagagcgcga gctgatgctg gtcacggtga ccgccgagcc ggaccgtcgc
     2881 gatgagatcg tggagcacct ggatcgggcc ggcggcaagg tcttgagcct gagtaccgat
     2941 cgtatgatgt tgtcgctcgt cggtccgcct cgccgggtcg acgagttcga ggacctgctc
     3001 cgcgagtacg gcatcatcga gttgcagcga acgggtcggg tggccttgcc cgttctcgat
     3061 gacgcgctgg actgaagctt cttccgagca ccccctttga aatcccattt tcccgatagc
     3121 cagaccgata cggccgtgag gccgaccgac cacaagccag gagaatccag tggcgaacat
     3181 ctactatgag aaggacgttg accgttcagc gatcgcggag cgcaaggtgg ccatcctcgg
     3241 ctacggatcc cagggccacg cacatgccct gaacctgaag gagtcgggca tcgacgtatg
     3301 cgttggcctg cgtgacggct cctcgtcggc cgccaaggca tcggaggccg ggctcgccgt
     3361 gaagtccctg tcagacgcct cggcatgggc cgacgtgatc atgatcctgt tgcccgacac
     3421 cgatcaggcg gcggtctacg aggagcacat cgctcccaac ctgtcagccg gtgacgccct
     3481 ggcgttcgcc cacggtttca acatccgctt cgacctgatc gccccgccgg ccgacgtcga
     3541 cgtgatcatg gtc
//
LOCUS       DASCMR010000082         5267 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000452095, whole genome shotgun sequence.
ACCESSION   DASCMR010000082 DASCMR010000000
VERSION     DASCMR010000082.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5267)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5267)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5267
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000452095"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..431
                     /locus_tag="QGG16_01980"
     CDS             <1..431
                     /locus_tag="QGG16_01980"
                     /inference="COORDINATES: protein motif:HMM:NF015734.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HJP24075.1"
                     /translation="GPAVEEVPDLSNRPVLDAMNIVSRLGWRASTAEEKSRTVPEGQV
                     VRTEPPARSELAPGGTVVIVVSSGLPLVPVPAVEGMREADAVAALTDVDLVANVRSEV
                     LPAYSPNDGRVISQSPVPDGEVDLGTRVTIVIGRAEDPTS"
     gene            complement(452..1030)
                     /locus_tag="QGG16_01985"
     CDS             complement(452..1030)
                     /locus_tag="QGG16_01985"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012229993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HJP24076.1"
                     /translation="MSPRVLVIDNYDSFVYNLVQYLGELGADPLVYRHDAITLADVEA
                     LAPDAVLISPGPGRPEDAGVSTAVIHWAAGRVPLLGVCLGHQAIGAAWGGSVVRAPKV
                     MHGKTSMIQHEGAGIFAGLPAPLEATRYHSLIVDRDSIPDELEITATSEDGLVMGLRH
                     REFDVEGVQFHPESVLTANGHDLLTNFLARVA"
     gene            1114..1464
                     /locus_tag="QGG16_01990"
     CDS             1114..1464
                     /locus_tag="QGG16_01990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24077.1"
                     /translation="MSSSENVNPTSDPSPEDSVEGGATPPRPRPAKKRVQGGRVTPKG
                     TRTGAPVDHSMSAGHASSPTWMTVLLFGLLGLGILIIFFNYVGWMPGGTSNGFLMLGL
                     GSILGGIITATQYH"
     gene            complement(1612..1863)
                     /locus_tag="QGG16_01995"
     CDS             complement(1612..1863)
                     /locus_tag="QGG16_01995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24078.1"
                     /translation="MLTLKIIIAIAVAVMMLRMGITVLRALATPIPEPPPVGELRKVK
                     LQYRCSLCGTEVRMTVAPDEIPDPPRHCMDDMELQATEE"
     gene            2004..2525
                     /locus_tag="QGG16_02000"
     CDS             2004..2525
                     /locus_tag="QGG16_02000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HJP24079.1"
                     /translation="MELTTDANLALLILRVVVGLTLAAHGWNKFTGGGKIPGTGRWFD
                     SIGMRPGRLNAYLAASTELGAGVLMAVGLLHSLAAAGVIGVMTVAGWTSHRSNGFFII
                     KEGWEYVFVLSVAALVSATTGPGSWSVDDVLGIADDLDGMTGLWIALLLGVGGGVVQM
                     LTFYRPSSVARGD"
     gene            2541..3635
                     /locus_tag="QGG16_02005"
     CDS             2541..3635
                     /locus_tag="QGG16_02005"
                     /inference="COORDINATES: protein motif:HMM:NF013775.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HJP24080.1"
                     /translation="MPDHLRGPLDEDLDLRALEEWLVDRLSDDGVGAVRLAAPVRPEG
                     GYSGETLILPAVVEKDGREVEERFVVRREPPEAAIYPAQSPTTTVEVELQWRVLRGLE
                     DHSEVPVAPSIGFEPDGKILGGPFFVSGFVAGDIPREDPAYVAEGFYAEATPERRRAM
                     NEAAAQTIATVNRVDWMTAGLGHLVPEGCEPTNLRQLDLWEEFATGELRGRLHPTLAE
                     GWRRLRAEVPPDAPPALCWGDCRLGNIFWDGARPACTTDFEGATIAPAEFDLGWFLSF
                     DRWIHEACGNPRLDGEPSREELVGVYERALGRRAVGVRWHEVFGAARYCAIVLRVMNR
                     LEERGLLPPGSDLYLGGGVTDALRMQLEER"
     gene            3662..4690
                     /locus_tag="QGG16_02010"
     CDS             3662..4690
                     /locus_tag="QGG16_02010"
                     /inference="COORDINATES: protein motif:HMM:NF013046.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HJP24081.1"
                     /translation="MQVILSDDHRAHSPSAELFEGGLVRPFECPERWDHVVAALDAAG
                     FEDRHDPEPVDLDGVVRVHDPAYVDFLRTFWEDWTASGHTGDAIPTMFPVRGLRHDRV
                     PLEPDGRLGYFAFAAETAITAGTWRAASAAAAIAQTGQRLVAAGSPAAFGLCRPPGHH
                     ASSDQFGGYCFLNNAAIAAEGFLVDGADRVAVLDIDFHHGNGTQGIFWERADVLFTSL
                     HGHPADAFPYFLGYEDETGAGLGEGCTANYPMRPGTGFAEWSTALDDACRRILAHRPD
                     ALVVSLGVDTFEGDPISFFRLATADYLEVGRRIGALGLPTLYVMEGGYAVAEIGANTV
                     NVLTGHIG"
     gene            complement(4722..5105)
                     /locus_tag="QGG16_02015"
     CDS             complement(4722..5105)
                     /locus_tag="QGG16_02015"
                     /inference="COORDINATES: protein motif:HMM:NF016152.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HJP24082.1"
                     /translation="MTTDRDAQDQALLTGLRTACLPLPGVEERINHGMPTFAVVRRTA
                     FCNLHHHQEDDRPTLWFKAAAGVQAELVDQEPDRFFVPPYVGPRGWVGLRLDVDLDWD
                     EVAAVVEDAWRLVATKRQLAERDNV"
     gene            complement(5131..5207)
                     /locus_tag="QGG16_02020"
     tRNA            complement(5131..5207)
                     /locus_tag="QGG16_02020"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5171..5173),aa:Ala,seq:tgc)
BASE COUNT          831 a         1662 c         1834 g          940 t
ORIGIN      
        1 ctgggccggc cgtcgaggag gtgcccgacc tttcgaaccg gcctgtgctc gatgcgatga
       61 acatcgtgtc gcgtcttggt tggcgggcca gcacggctga ggagaagagt cgcacggtgc
      121 ccgagggcca ggtggtccgc accgagccac cggcccgaag tgagttggcg cccggtggca
      181 ccgtggtcat cgtcgtgtct tcgggtctgc ctttggtgcc cgtcccggcg gtcgaaggca
      241 tgcgggaggc cgacgcggtc gctgcgttga ccgatgttga tttggtggcc aacgtccgca
      301 gcgaggttct gccggcctac agccccaacg atgggcgggt catcagccag agcccggtgc
      361 cggatggaga ggtcgacctg gggacccgag tgaccatcgt gatcggacgg gccgaggatc
      421 cgaccagcta gcagcgggcc cgatctccgg gtcaggcgac ccgggccagg aagttagtta
      481 gcagatcgtg tccgttggcc gtcaggaccg actcgggatg gaactgcacg ccctccacgt
      541 cgaactcgcg gtgtcgtagc cccatgacga gtccgtcttc actggtcgcc gtgatttcca
      601 actcgtcggg gatcgagtcc cggtcgacga tgagcgagtg gtagcgggtg gcttccaacg
      661 gagcgggtag gccggcgaag attccggcgc cctcgtgttg gatcatcgac gtcttgccgt
      721 gcatgacttt cggcgcccgc accaccgagc caccccatgc ggcaccgatg gcctgatggc
      781 cgaggcacac ccctagcagg ggtactcgtc cggccgccca gtggattacc gctgtggaga
      841 cgccggcgtc ctccggtcgt cccggcccgg ggctgatcag cacagcatcg ggagctaggg
      901 cttccacgtc ggccagcgtt atcgcgtcgt ggcggtaaac gagcggatcg gcaccgagct
      961 cgcccaggta ttggacgagg ttgtagacga atgagtcgta gttgtcgatg accaggacgc
     1021 gtgggctcac tcttgagacg ctaaccgaac cgattcgagg ccccagcagg ttcggacctc
     1081 gggatggtgg ctgggggccg tatcctcgtg gacatgtcga gtagcgagaa cgtcaacccc
     1141 acgtcggacc cgtcccctga agattctgtc gagggtggtg ccacaccgcc gcgcccccgg
     1201 cccgccaaga agcgggtcca gggaggtcgg gtcaccccga agggcacccg tactggtgcc
     1261 ccggtggacc actcgatgtc agcgggtcat gcatcgtcgc ccacctggat gacggtgctg
     1321 cttttcggcc tgttgggact gggaattttg atcatcttct tcaactatgt cggttggatg
     1381 cccggtggaa ccagcaacgg tttcctgatg ctgggcctcg gttcgatcct cggcgggatc
     1441 atcaccgcca cccagtacca ctgaccaagt tcgtgctggg gtccggcggt cgaaccggat
     1501 cgcatcttgg aatcacatcc ctgtgattca cccacaggcg tgtccacacc ctgtggaaaa
     1561 ccatcgcttt aaagagcttt gaacaggcgc gacgcgtcca ttgaaggagg gtcactcttc
     1621 ggtggcttga agctccatgt cgtccatgca gtgacgcggt gggtcgggaa tctcgtcagg
     1681 ggccaccgtc attcggactt cggtcccgca gaggctgcag cggtactgga gcttcacctt
     1741 ccggagttcg ccgaccggcg gaggttcggg aattggagtg gctagggccc gcagcacagt
     1801 gatgcccatg cgcagcatca tcacggccac cgcgatagca atgatgatct tcaacgtcag
     1861 catctggcca gcctaggacc ggctagggaa cggacccgga ggtcgagtgg ccctagttca
     1921 cggatctcct cgtccagcgg ggtccggtcc cccggtagtg tccgcgtcgg tcgagtcctg
     1981 cccacctgac cggaggtatt tccatggaac tgaccactga cgccaacctg gctctgctga
     2041 tccttcgggt ggtggtgggt ctgacgttgg ccgcccatgg ctggaacaag ttcactggcg
     2101 gggggaagat cccgggcacc ggacggtggt tcgacagcat cgggatgcgc cccgggaggc
     2161 tgaatgccta tcttgcggcg tcgacagagc tgggagccgg cgtgctgatg gccgtgggcc
     2221 tcctccattc gttggctgcc gcgggcgtca tcggcgtgat gactgtcgcc ggttggacgt
     2281 cgcatcgcag caacgggttc ttcatcatca aggagggctg ggagtacgtt ttcgtgctct
     2341 cggtggccgc tctcgtgtca gctaccactg gccccggctc ctggtcggtg gatgacgtcc
     2401 tgggcatcgc cgacgacctc gacggcatga ccgggctgtg gattgcgctg ctgctcggcg
     2461 tgggcggtgg tgtcgtccag atgctcacct tctaccggcc atccagcgtg gcgcggggcg
     2521 actgaccgga ccggcggata gtgccagacc acctcagggg cccgctggac gaagacctgg
     2581 acctccgggc attggaggaa tggctggtcg accgcctctc tgacgacggg gtcggggccg
     2641 tgcgattggc ggcaccggtc cgacccgagg gcggctactc gggagagacg ctgatcctgc
     2701 ctgccgtcgt cgagaaggat ggccgggagg ttgaggagcg cttcgtcgtg agacgggagc
     2761 ctccggaagc ggccatctac ccggcgcagt cgccgaccac caccgtcgag gtggagctgc
     2821 agtggcgggt gctgcgggga ctggaggacc actccgaggt gcccgtggcc ccgtcaatcg
     2881 gcttcgagcc ggacgggaag atcctgggtg gaccgttctt cgtgtccggc ttcgtagccg
     2941 gcgacatacc gcgggaggat ccggcctacg tggccgaggg cttctatgcg gaggccacgc
     3001 ctgagcgcag gcgggccatg aacgaggcgg cggcgcaaac catcgccacg gtgaaccggg
     3061 tggactggat gaccgccggc ctcggtcacc tggtcccgga ggggtgtgag cccacgaacc
     3121 ttcgccaact ggacctgtgg gaggagttcg ccacgggcga gttgcgaggg cgcctgcatc
     3181 cgaccctggc cgaaggttgg cggaggctca gggccgaggt tccacccgat gctccaccgg
     3241 ctctctgctg gggtgactgc aggctgggga acatcttctg ggatggagcc aggccggcct
     3301 gcacgaccga cttcgagggg gcgaccatcg ccccggcgga gttcgacctg ggatggttct
     3361 tgagcttcga ccggtggatc cacgaggcct gcgggaatcc ccgcctggac ggcgagccct
     3421 cccgggagga gctggtcggg gtgtacgagc gggcgttggg acgccgggct gtgggtgtgc
     3481 gctggcacga ggtcttcggc gcggcccgct actgcgccat cgtcctgcgg gtcatgaacc
     3541 gcctggagga acgcggcctc ctgccacccg ggagcgacct ctacctgggc ggcggggtta
     3601 ctgatgccct gcggatgcag ttggaggaac gctgaaccgg cggcccacct acggtgacgg
     3661 catgcaggtc atcctgagcg acgatcaccg tgcccattcc ccgtccgcgg aacttttcga
     3721 gggtggcctg gttcggccat tcgagtgtcc ggaacgatgg gaccacgtgg tggccgccct
     3781 ggatgcggcc gggttcgagg accgtcatga tcctgagccg gtcgacctgg atggggtcgt
     3841 tcgggtccac gatcctgcct acgttgactt cctgcggacg ttctgggagg actggacggc
     3901 atccgggcat acgggcgacg ccatccccac gatgtttccg gtgcggggac tccgccacga
     3961 tcgggtgccc ctggagcccg atggtcggct ggggtacttc gccttcgccg ctgagacggc
     4021 gatcaccgcc gggacgtgga gggccgcatc ggctgctgcg gcaattgccc agaccgggca
     4081 gcgccttgtc gccgccgggt cgccggcggc cttcggactg tgcaggccgc cgggccacca
     4141 tgcgtcgtcc gaccagttcg gcggctactg cttcctgaac aacgcggcca tcgccgcaga
     4201 ggggttcctc gtcgacggag ccgatcgggt ggcggtactg gacatcgact tccaccacgg
     4261 caacggcacc cagggcatct tctgggagcg ggccgacgtg cttttcacgt cgctccacgg
     4321 gcacccggcc gacgctttcc cgtacttcct cggttatgag gacgagacgg gggccggtct
     4381 cggagagggc tgcaccgcca actatccgat gcgccccggc acgggcttcg ccgaatggtc
     4441 gacggcccta gacgatgcct gccggcggat cctcgcccac cgaccagatg ccctggtggt
     4501 gtcgctgggc gtggacacct tcgagggcga tccgatcagc ttcttccgcc tagccaccgc
     4561 tgactacctg gaggtgggcc gccgtattgg cgccctgggc ctgcccaccc tgtatgtgat
     4621 ggaaggtggc tacgcggtgg cggagatcgg cgccaacacc gtcaacgtcc tgaccggaca
     4681 catcggctga ccagcaggct ccctgacgcc tgatccggtg atcagacgtt gtcccgttcg
     4741 gccagctggc gcttggtggc gacgaggcgc caggcatcct cgaccacggc ggccacctcg
     4801 tcccagtcga ggtccacgtc gagccgcagg ccgacccatc cccgggggcc cacgtagggg
     4861 gggacgaaga accggtccgg ttcctggtcg accagctcgg cctgtacccc ggctgccgcc
     4921 ttgaaccaca gggtgggacg gtcgtcctcc tgatggtggt gcaggttgca gaaggccgta
     4981 cgcctgacca cggcgaaggt aggcatgccg tggtttatcc gctcctcgac accgggcagt
     5041 gggaggcagg cagtccgtag cccggtcaac aacgcctgat cctgagcgtc acgatccgtg
     5101 gtcatccggt tatcgacaga cgacgattca tggtggagct gatgggaatc gaacccacga
     5161 ccccctgctt gcaaagcagg tgctctagcc aactgagcta cagccccgtg tatagatcca
     5221 gcgtacggcc accgaccggg gaggaaaccg actaggaatt cgatcat
//
LOCUS       DASCMR010000083         2351 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000452550, whole genome shotgun sequence.
ACCESSION   DASCMR010000083 DASCMR010000000
VERSION     DASCMR010000083.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2351)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2351)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2351
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000452550"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..787
                     /locus_tag="QGG16_02025"
     CDS             <1..787
                     /locus_tag="QGG16_02025"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: protein motif:HMM:NF012640.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008909 - isochorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="isochorismate synthase"
                     /protein_id="HJP24083.1"
                     /translation="LAKAVPCRSIHVDHRPETSPLLAGLRDTYPACATLAVRPAGADT
                     IFIGATPERLAAVHVGHLHTAALAGSAPRDADPAIDAALGQGLLTSPKERAEHDVVVE
                     AVDRALDGLGVADRHPRNPTLLRLHGIQHLHTPIDAELPAGVGLLDLVGALHPTPAVA
                     GHPGGQAAHLRAAHEGMERGWFASPVGWMDASGDGEFRVALRTGLIHDQGTTLYAGAG
                     VVAGSDPDRELAETDVKLRTLLGLVLATPPSVSAEPGAMGATP"
     gene            784..>2351
                     /gene="menD"
                     /locus_tag="QGG16_02030"
     CDS             784..>2351
                     /gene="menD"
                     /locus_tag="QGG16_02030"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070204 -
                     2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-
                     carboxylic-acid synthase activity [Evidence IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylic-acid synthase"
                     /protein_id="HJP24084.1"
                     /translation="MTLLPAADPVAVQAWCRALFAQLVECGVNHVAASPGSRSTPMTV
                     AADRTPGLEMSMHLDERSGGFFALGLARATDRPVALLCTSGTAAANYLPAVIEAFHSG
                     VPLIVLTSDRPAELQGVGAPQTIDQDGIYGTHVRWATTTAVAGSEPAGEAASVAHQAV
                     VRATRPAPGPVHLNVPLREPLEPPSGDPSQTGLTSVGLLPLPPDRVPIEAGCLDELVA
                     GNDRPERGLIVAGPMDLSPAGLVALAKLARRTGWPILADPVSGVRRGGHVANAPVLAT
                     GDHLLRSSWADDHRPDVVVQLGAMPTSKGYRLWLDRVGADRIVAVDHLGRFPDAARRI
                     TDRVEAEPGRLAGHLLRHFTDDDRTEIQPDTWMGTWLNAEATAASAVATLVADAPFDE
                     PGVVAALDDALPDAVTLVVGNSMPLRDLDAFLPVDQREWSVRGNRGANGIDGQVSTAI
                     GLAAGSSTPTVLLAGDLTVLHDLGGLTATRRLGVDLTVVIVDNNGGGIFSFLPIVERE
                     HVDHQRLFHTPHGL"
BASE COUNT          353 a          900 c          748 g          350 t
ORIGIN      
        1 cctcgccaag gccgtgccat gtcgatccat ccacgtcgac caccggcccg aaacctcacc
       61 gctgctggcc ggcctgcgtg acacctatcc ggcgtgcgcc acgctggctg tacgaccagc
      121 tggagccgac acgatcttca tcggggccac cccagaacgt ttggccgccg tgcacgtcgg
      181 acacctccac accgcggcgc tcgccgggtc tgcgccacga gatgctgacc cggcgatcga
      241 cgccgccctc ggccagggcc tgctgaccag ccctaaggaa cgcgccgaac acgacgtagt
      301 cgtcgaggcc gtcgaccggg cgttggacgg cctcggcgtg gccgaccgcc acccacggaa
      361 tccgactctg ctccgactgc acggcattca gcacctccat acgccgatcg acgctgaact
      421 tcccgccggc gtaggactgc tggacctggt gggcgccctc caccccacac cggcggtggc
      481 cggccatccc ggcggccaag ccgcccacct ccgggccgcc cacgagggca tggaacgggg
      541 atggttcgcc agcccggtgg gctggatgga tgcatcgggt gacggcgagt tccgggtggc
      601 cctgcggacc ggcctcatcc acgatcaggg gaccacgttg tacgcgggcg ccggcgtggt
      661 ggccggctcg gatcccgacc gcgagctagc cgaaaccgac gtgaagttgc gaaccctcct
      721 tggactcgtg ctggctactc cgccatccgt cagcgctgaa cccggggcga tgggggccac
      781 gccatgaccc tcctcccggc cgccgacccg gtcgcagtcc aggcctggtg ccgcgccctg
      841 ttcgcccagt tggtcgaatg cggggtgaac cacgtcgccg catcgccagg atcacggtcc
      901 acaccgatga cggtggccgc cgaccgcacc cccgggctcg agatgtcgat gcaccttgac
      961 gaacgctccg gtggcttctt cgccctgggc ttggcccggg ccaccgaccg tccggtagcc
     1021 ctgctgtgca cctcgggaac cgcagcagcc aactacctgc cggcagtcat cgaagccttt
     1081 cattccgggg tgccgctcat tgtcctaacc agcgaccgac cggccgagct gcagggcgtc
     1141 ggcgctcccc agaccattga ccaggacggt atctacggga cccacgtgcg ttgggcaacg
     1201 accaccgcgg tggccggaag cgaaccggcc ggcgaggcgg catcagtggc acatcaggcc
     1261 gtggtgcgag caacccggcc ggcccctggc ccggtgcacc tcaacgtgcc gctacgcgaa
     1321 ccgctggagc ccccctcggg cgatccttca cagactggcc tgacctctgt tgggttgctt
     1381 cccctccctc ccgaccgggt acccatcgag gcaggctgcc ttgacgagtt ggtggccggc
     1441 aacgaccgcc ccgagcgggg cctcatcgtg gccggcccca tggacctctc gcccgccggc
     1501 ctcgtcgccc tggccaagct ggcccgccgg acgggatggc cgatcctcgc tgaccctgtg
     1561 tccggtgtcc gccgcggcgg ccacgtcgcc aacgcccctg tgctggccac cggcgaccac
     1621 ctcctacgct cctcgtgggc cgacgaccac cgccccgacg tggtcgtcca actgggggct
     1681 atgccgacca gcaagggcta ccgcctgtgg ctggaccggg tgggagccga ccgcattgtc
     1741 gccgtcgacc acctcgggcg cttcccggat gctgcgcgcc ggatcaccga ccgggtggaa
     1801 gccgagccgg gtcgtctagc cgggcacctc ctcagacatt tcaccgatga cgaccggacc
     1861 gagatccagc cagacacctg gatgggcacc tggctgaatg ccgaggcgac cgccgcgtcc
     1921 gccgtggcaa ctctcgtggc cgatgctccg ttcgacgagc ccggcgtggt ggccgccctt
     1981 gacgacgccc tgcccgacgc ggtcacactg gtggtgggca actccatgcc gctacgcgac
     2041 ctcgacgcct tcctgcccgt cgatcagcgg gagtggtcgg tccgcggcaa ccggggcgcc
     2101 aacggcatcg acggacaggt ctccacggcc atcggcctgg cagccggctc gagcaccccg
     2161 acggtgctgt tggccggcga cctcaccgtg ctccacgacc ttggtggact cactgcaacc
     2221 cgacgcctag gtgtcgacct gacggtggtc atcgtcgaca acaacggagg cggaatcttc
     2281 tccttccttc ccatcgtcga acgggagcac gtcgaccacc agcgcctctt ccacacgccc
     2341 catggactgg a
//
LOCUS       DASCMR010000084        29140 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000458916, whole genome shotgun sequence.
ACCESSION   DASCMR010000084 DASCMR010000000
VERSION     DASCMR010000084.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 29140)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29140)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29140
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000458916"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..475
                     /locus_tag="QGG16_02035"
     CDS             <1..475
                     /locus_tag="QGG16_02035"
                     /inference="COORDINATES: protein motif:HMM:NF036848.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24085.1"
                     /translation="TTNGGLTFAGGPHSNSVGQSLATLVGRLREVPGTGLLYANGGYL
                     GKHAFGIYGTEPPATTFQSIDGAAKVADQPTRTPDPDFAGAAIVNGYTVRHDRHGQPT
                     EALVAALTPGSDSKSDSDSSRVWGGTTDRATLDTLLDGDRVGQPCDLDPTGLISL"
     gene            531..1661
                     /locus_tag="QGG16_02040"
     CDS             531..1661
                     /locus_tag="QGG16_02040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018580 - nitronate monooxygenase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HJP24086.1"
                     /translation="MQTPITEMFDIEFPIVAFTHCRDVVVAVSKAGGLGVLGAVAHSD
                     TQLETDLAWIEDELGDRPYGIDLIVPARYAGSDEGGLSVADLVSTIPGAHREFLDELL
                     KRYGVPENPDSAGWAERPGDAPFSANRADRQLDIALAHRPVLVANALGPPPRDMVERC
                     HATGVKVGALAGTKVHAERHVAAGADIIIAQGTEGGGHTGHIGSMVLLPEVVDAVAPV
                     PVLGAGGIGRGRQMAAAVALGAAGVWCGSVWLTTEEAETHPVVKDKMLAAGSGDTLRS
                     RSITGKPARMLRTAWTEEWDRDDTPAPLGMPLQPMLTGAAIDRINRAAHHEGSGAEDL
                     ATYFVGQVVGTMNRSRGAGQVVMDMVEEFIDAAQAVAAQLEV"
     gene            complement(1669..1902)
                     /locus_tag="QGG16_02045"
     CDS             complement(1669..1902)
                     /locus_tag="QGG16_02045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24087.1"
                     /translation="MELVMLGTGGPLPDVRRAGPTNHRLGRPTVADAARVVVGALTLN
                     HCVSPVGVAPDTANGRVEWLALAAAQNRIPVGN"
     gene            complement(1946..2707)
                     /locus_tag="QGG16_02050"
     CDS             complement(1946..2707)
                     /locus_tag="QGG16_02050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJP24088.1"
                     /translation="MDIRLDGKVAIVTGGSRGIGRGIAAAMASAGAKVMITSRNEESC
                     ATTVEELRASTGGDLAYVAGHVGKVEDMDRVLDSTLEAFGAIDVLVNNAATNPYAGPV
                     IDIDVPRWDKTFATNLTTPLVWTQACWNRWMKEHGGSVVNISSVGAFGTNAILGVYDL
                     TKRALIHLTEQLAAEVGPGVRVNAVCPGLIRTDFAKALWEDGRGDAIAEALPMKRLGE
                     PEDIANTALFLASDAASWMTGHAVLVDGGQLINMN"
     gene            complement(2781..4337)
                     /locus_tag="QGG16_02055"
     CDS             complement(2781..4337)
                     /locus_tag="QGG16_02055"
                     /EC_number="6.2.1.3"
                     /inference="COORDINATES: protein motif:HMM:NF004837.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase"
                     /protein_id="HJP24089.1"
                     /translation="MDSSLVKNFADIIDLGAAARGDQDMFVLGDDRISWNEMQARAGK
                     VANALAAEGVGSQDRVAFIDKNSVEYFEVLYGCAYRNAVTVAVNWRLAPPEMAYIVND
                     SQATVLVIHEEFADHLAAFRGDLAHVTTVVVIGDGGDDASYAAWSDAYGPECEKTPSS
                     DDDVCSQLYSSGTTGHPKGVQSTNANFQALFATVDWDMDEESRNMAVLPFFHIGGGGW
                     ALFGMVNGATTFTVRDFDPAGVLRGIETEGITHAIFVPAMLQFFLMVPTDSIDLSSME
                     RIAYGASPITEDVLVKSMAQFGCEFFQVYAMTETTGAGTTLPPEDHGGDADPKLLRSA
                     GKPIRGMEMKIVDPETGEEVPDGEVGEVWMRHGGNMLGYWNLPEETAKALPGDGWLRS
                     GDAAYLEDGYLYIHDRVKDMIVSGGENVYPAEIENALMSHDGIADVAVIGVPDERWGE
                     AGKALVIAVPDSGVTADDILLHARQHLAGFKCPKTVEFVEEIPRNPSGKILKRILREP
                     YWEGHDRRVG"
     gene            4451..5503
                     /locus_tag="QGG16_02060"
     CDS             4451..5503
                     /locus_tag="QGG16_02060"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03617 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HJP24090.1"
                     /translation="MATNLTLDMMASPLPLRQVGDLARRAESAGFGAMWFTEGARTAS
                     LSCAASALATERLGLGTAIAVAFPRSPMVTAQMAWELAEATGGRYVVGLGTQVKAHVE
                     RRYSSPYAPPGPRLREYVRAMKAIFRAFRGEEKLTFEGEHYSFNLLPRMWSPGPIDVA
                     DPPVYISAVLPWMSRMAGAECDGIHIHPMHSPGWLADVQLPEVAAGAASAGRSMKDVM
                     VVCPVIIAVGDTDEEIAAARDANRATIAFYGSTPNYAPVLEHHGFDGLQGELNACQRS
                     GDMATMISLVDDDVLDHYTVSATWSDLGGVLADRYRGMAPHTRVMTYTALDHWRSDPD
                     LLDRWSDVARHLADAD"
     gene            complement(5528..5830)
                     /locus_tag="QGG16_02065"
     CDS             complement(5528..5830)
                     /locus_tag="QGG16_02065"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015925.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative quinol monooxygenase"
                     /protein_id="HJP24091.1"
                     /translation="MIIIAGSISIDPERVDAMLEAVVPLMQATHAEEGCIDYVLSADP
                     AEAGKIRIFEKWASDEALGAHMTAPHMGDFQKALKTVGVTGMSVQRFDNAEESKLF"
     gene            5886..6581
                     /locus_tag="QGG16_02070"
     CDS             5886..6581
                     /locus_tag="QGG16_02070"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HJP24092.1"
                     /translation="MLDGSGDPVAEVPVTDRSATYGAVTGADGVTRCPWPGDHADYRT
                     YHDDEWGRPVVDDVRLFEKASLEGFQAGLSWLTILRKRDNFRAAFAGFNPAVVAHFTD
                     ADVARCLGDAGIVRHRGKIESTINNAARALEIIDQFGSLAAYIWSFEPDSPVRATQDD
                     IPATTAESTALSHDLKHRGWSFVGPTTIYALMQAMGMVNDHLPGCDLHAVVAAERAAL
                     VRPVPHVDPATTP"
     gene            6578..7606
                     /locus_tag="QGG16_02075"
     CDS             6578..7606
                     /locus_tag="QGG16_02075"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HJP24093.1"
                     /translation="MIRLSVLDQSPVPEGSTAGDALRNTLDLARRTEAMGYHRYWVAE
                     HHGMAGLAGSSPEALIGSIAGATDRIRVGSGGVMLTHYAPLKVAESFCVLASLHPGRI
                     DLGVGRAPGSDHLTAAALARGGARTPLENYPNQVQELVDLVDDTLPAHSPIQGVRATP
                     RPDEPPEIWLLASSADSAAFAAHFGLPLGWADFIAQVDGAPIIDAYRRQFRPSARCAE
                     PRVLLCASAVCADTDEEAEIIVAAVRTWRASGLRGPVPAARATSDSDEATPPVTPAPL
                     TVQPGRRSIATGTPDRVSTRLTEMNQAIGAEEVMVVTICHDHEARVRSYELLAQQFGL
                     IPPATPGQ"
     gene            7603..10281
                     /locus_tag="QGG16_02080"
     CDS             7603..10281
                     /locus_tag="QGG16_02080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3516 domain-containing protein"
                     /protein_id="HJP24094.1"
                     /translation="MTDAAAQAITLADRIPVGTDPDLLLDLFVDWAAERNLELYEAQE
                     EAILELLSGTHVVLATPTGSGKSLVATAAHAAAMARGERSIYTAPIKALVSEKFFALA
                     RDFGPEHVGMVTGDASVNPGAPIICATAEILAHQTLREGAECPFGLVVADEFHFYGDP
                     QRGWAWQVPLLELPNAQFLLMSATLGPTARFTEDLTRRTGRSAVTVAGTVRPVPLTFE
                     YRETPLHESITELVDVDRAPVYIVHFTQKAASEKAQDLCSLDVLTKDEKAAVRSEVGG
                     FRFDTPIGKDLKRFIGHGIGLHHAGMLPRYRLLVEKLAQAGLLKLICGTDTLGVGVNV
                     PIRTVLFTQLCKYDGVSTRLLGNREFAQISGRAGRRGFDDEGHVWVQAPVHWIENRRA
                     EAKVVADPGKKKKLVKKKPPDRGYAHWNEVSYQKLVDGTPEPLISSFDVTHQMVLNML
                     SRPGDGRQDMKRLLLDNHEPRDRQRHHIRRAIGIYRSLRDAGVIVELDQPDGQGRLVS
                     VGMDLQNHFALHQPLSLFALEVIPELADRPEPEPASDPEPSENAEDQKQAVRQAASEA
                     ARHADPDASAREHALDVLSVIESVLEDPGVIIAAQIHQMKGELVARLKMEGVEYEERM
                     ERLAEVEQPRPLKEFLYGTFDVFRSHHPWVGTENVKPKAVARELYETGFDFRQYIEHH
                     GLKRSEGTVLRYLGEAYKALVQTVPEDCRTEAIRDIEAWLGEMVRQVDSSLIDEWEKL
                     RNPEDPSPEGKAADTGPERPDVTRNARAFKIMVRNEVFRWVQLLSRRRLDDHESLAEV
                     PAVDDARRTGADVAEAIAPYWEEHSVLPTDSHARGGTFFVLDDSGGVGAARWPVVQTI
                     ADPKGHDEWVLEGQVDLEASREEGRAVVRLGAIRRL"
     gene            complement(10278..11315)
                     /locus_tag="QGG16_02085"
     CDS             complement(10278..11315)
                     /locus_tag="QGG16_02085"
                     /inference="COORDINATES: protein motif:HMM:NF012568.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HJP24095.1"
                     /translation="MAAVPAVLVRARELVEPALVAAVDRLCDELRLPARYHFGWVEAN
                     GSPSTAGPGKGLRPALAVLSAEAVGADGAVAVPGAAAVELVHNFSLVHDDIVDGDVER
                     RHRPTVWAVFGVDDAVISGDALHNLAFQVLLDTPAGQSGGEPSAERVRATIRLLTATT
                     AMIAGQSADMAFDDLPEVDLAACLAMEADKTGALLGYSASVGAVLAGAPTDQVDALEV
                     YGQELGLAFQAVDDVLGIWGDPSVTGKAAGNDLRERKKSMPVACVLSGGGTAAAELRA
                     VYNVAGDLSDDDVDRASAVIEAAGGREDTIAEARRRLDAALAAIDGVGLEVGAVDELT
                     GLARFVAEREF"
     gene            complement(11315..12091)
                     /locus_tag="QGG16_02090"
     CDS             complement(11315..12091)
                     /locus_tag="QGG16_02090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HJP24096.1"
                     /translation="MKIAALQHNIAWEDAPATCTRVAPMIAEAAADGADMVLLTEMFG
                     PGFSLAADRIAEPPGGPTEQFMAGQAAVHDIWVGGSIPTRDDPDGEPGALPVNRFLLV
                     GPDGTQHHYDKLHPFTFADEHEAYRAGDTPVTVTIDGLRLTLFVCYDLRFANAFWDRA
                     LDTDAYLVVANWPESRRDHWSALLVARAIENQAYVVGVNRVGEANGLTYSGDTVIVDP
                     SGEVVAEGVDYTEGVVMADVNPARVAEVRDAFRFLPDRRD"
     gene            complement(12096..13265)
                     /locus_tag="QGG16_02095"
     CDS             complement(12096..13265)
                     /locus_tag="QGG16_02095"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF005855.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HJP24097.1"
                     /translation="MPDRPNAHLVSRMQGHRLSIFAEMSTLAVETGAINLGQGFPDTD
                     GPAEVTAAAIQAIRDGFNQYPPDRGIPELRRAVADHQARFYGQQVDPGDVMVSTGASE
                     AIGAAIMALVEPGEEVVVFEPYFDLYAAVIELAGGVRRAVTLRTPDYSFDPDELEAVI
                     NPSTRLILINTPHNPTGKVFSEAELAEIARLAITHDLLVVTDEVYEHMTYDATRHIPL
                     ATLPGMAERTVTISSGGKSFGLTGWKVGWAHGPTELVNAVHTVKQHLSFTSGAPFQRA
                     MVTALTLGDSYFTVLADDLCAKRDLVADGLRSVGLDVLPAQGTYYVTADVAPLGYDDG
                     MEFCRDLPGRCGVVAIPNRVFYDDESAGRSIVRFAYCKQFEVLHEAVDRLSRLTA"
     gene            complement(13271..14428)
                     /locus_tag="QGG16_02100"
     CDS             complement(13271..14428)
                     /locus_tag="QGG16_02100"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP24098.1"
                     /translation="MATDQALADEIVGTIRSWVDRDVIPNVAEFEHADEFPQAMFDQM
                     CEFGLFGSTIPEEYGGLGLDITTYARIIEELSRGFMSLAGILNTHKIGVTMIGRFGTD
                     EQKQRLLPRMCDGSFRAAFSLSEPDAGSDTGALRCKAERDGDEWVVNGTKMWVTNGVR
                     ASLVMLMVRTPDDRITCLLVEKEPGETFEGISVSKKIDKLGYKGLETVEMSYVDHKVP
                     HANVLGGDEGIGHGRQYALSALELGRINIASRAVGVAQAAFEAAMRYAQQRETFDRPI
                     YEHQAIQFKLAEMATKLQAARLMTYDAARRADEGERVDMEAGMAKLFASEAAFEIATD
                     ALRIHGGNGYTAEFPVERYFRDTPLMIIGEGTSEIQKMVIARKLLERYPAE"
     gene            complement(14616..15806)
                     /locus_tag="QGG16_02105"
     CDS             complement(14616..15806)
                     /locus_tag="QGG16_02105"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJP24099.1"
                     /translation="MAGPATTGPEAGDRLATPRFLVLCLASFGYFTALGSTWPVVPAF
                     VEHDLGGGGVAVGLSVGAFGFSAALLRPLIGPLGDRRGRRFLLLLGSVGVSTSLLLLV
                     PATSVTMVVAARLVLGMGEAAFFIGISSAIQDLSPPDRRGEATSYFTVTLYTGLALGP
                     ALGEWLMDNGGPDRAFVVAAVLGVVPVLLARAAPGRPLDPPDVPLFRWRLHPAAIRPG
                     VMLFVGLLAYSGFLAFMALHAADVGVASSGTVFAAFAGLVVAVRLFGAKIPDRLGSLA
                     TTRLSMGFTAAGMLVLGLWTQPAGVYAGAMVMALGQCFLFPALFVLVVDRAPDVERSH
                     AIGSFSIAFDLAIAVGGFLVGAVVALTDRPGGFLFCAAVAAGALALTGPVLGSVGAIA
                     RSEA"
     gene            15830..16309
                     /locus_tag="QGG16_02110"
     CDS             15830..16309
                     /locus_tag="QGG16_02110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24100.1"
                     /translation="MHNQDSDRDLVDGEIGGDPHPKKQYTTFVAERGIAAPRAVAFDA
                     ACALISEATGGPVEDGSPEPHGLGARFEFTLGDLDLSEEVISFEPPWRRVYELSGAPV
                     ALYQGTTAFTDQGDRCLMAWSIVVDPLADGASDTFLAHAESFLTRFADDVKARAEAV"
     gene            16360..17271
                     /locus_tag="QGG16_02115"
     CDS             16360..17271
                     /locus_tag="QGG16_02115"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03564 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HJP24101.1"
                     /translation="MRIAINASAELQHTDLGRLRAHAVQAAEDGFSGWWLAQTGLIDA
                     LTAFTALADVAPGMEFGTAVIPTFPRHPTALAGQALTTAAALGDRPLVLGIGLSHRPV
                     IEDMLGLSFEKPIRHLIDYLEVLQPLLESGSVDYDGEAFTAHIATGRPADRPPSVMVA
                     ALGEQALRVTGRRTDGSILWMVGERTVANHIAPRLNEAADTAGRSAPRIICSLPTCVT
                     SDVDAARAAANAVFEIYGLLPSYRAMLDREGAAGPGDVAVIGNEEQVAARLSALADAG
                     VTDFSALEFGTNPDESARTRALLTSLV"
     gene            17562..18773
                     /locus_tag="QGG16_02120"
     CDS             17562..18773
                     /locus_tag="QGG16_02120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012231349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJP24102.1"
                     /translation="MTTIPRIISVDDHVVEPPDLWTSRLPAKYSDRGPRVERDTAVFN
                     FEGGVFSYEKGVEGGQMCDWWMYDDLVYPFPKLSAAAGFDELDIVPVTFDEIHPAGWK
                     QADRLIAMDENHVDVSICFPNVLPRFCGQAFLEREDKELALLCVQAYNDWMIDEWCAG
                     DGNGRLIPLTLIPLWDPIAAAAEVYRCAEKGSFAVAFSENPHPLGLPSIHDKDRFWDP
                     FLLACEETDTIVNMHIGSSSKMPTTSPDAPFAVSSTITFANAMGSMCDYILSGTFVRF
                     PKLKIAYAEGQVGWMPYVIERMDKIWEERGDASFGIDLPEPPSTYIPGHIWGCIFDDE
                     TGLKNRDVIGMDQICFEVDFPHADTTYPHTLDVATKICARAGLDDGEIYKLMRGNAIE
                     AFGLQRFGITA"
     gene            complement(18822..20012)
                     /locus_tag="QGG16_02125"
     CDS             complement(18822..20012)
                     /locus_tag="QGG16_02125"
                     /inference="COORDINATES: protein motif:HMM:NF016777.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJP24103.1"
                     /translation="MSTNYTLISSDCHAGGNMKAYEEYLSPSYREAFAEWRGAYRNPF
                     RDLQDDGRSRNWDDDRRNGDLDAEGVAAEIVFPNTVPPFFPTGALITYPATDRDEYER
                     RLEGIRTHNRWLADFCAAHPERRCGLPQVFLNDLDDTIADLELAAANGHSSFMLPAVP
                     PDSGMPGLYHPVYDRVWAACRDLDLTITQHGGSGNPSYGDAPAASLMFLLEVPFFAHR
                     NLSHLIMSGVFDRFPELRYVMTEQGVGWVIEDLRRMDGYHAQMASGRVGELGFPAELV
                     LPDKPSDYFARNVWIGASFPSPSEASAMKKVGVDRMMWGSDYPHNESTFPYNRLHLRR
                     SFSDWDEADLRKVFAENASKVYRIDMDALAPLADRIGPSVEEVATALDEVPRDAFSPA
                     FTRS"
     gene            20069..20653
                     /locus_tag="QGG16_02130"
     CDS             20069..20653
                     /locus_tag="QGG16_02130"
                     /inference="COORDINATES: protein motif:HMM:NF024701.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WHG domain-containing protein"
                     /protein_id="HJP24104.1"
                     /translation="MARKRGLGRDDVVTAGLAVLDHAGIDAVSLAAVAERLDVRPPSL
                     YAHVDGLAGLKRDLAHTTTVEFGEVLRDSVLGRSGPDAVRSFADAYRRWATGFPGRYE
                     MTLLPIAADDDERRAGARLALGAVQAVIRGFGIDETSAIQAGRSLRSALDGFSRLENA
                     DNMGRGDHDADFAFLIDLLIDGISQAGTQPPGPA"
     gene            complement(20650..21123)
                     /locus_tag="QGG16_02135"
     CDS             complement(20650..21123)
                     /locus_tag="QGG16_02135"
                     /inference="COORDINATES: protein motif:HMM:NF013224.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HJP24105.1"
                     /translation="MSDALSVMDAVDRAILGLLQKDGRIANVDLSEAVHLSPSACLRR
                     VRRLEEVGLIDRYVALVDPSAVGLGTDVFVEITLTGQDETTLEAFEQAVTRRPEILSC
                     HLMAGDFDYLVHVVVHDVADYEVLHRTHLAQLPGVARMVSSFALRPICARTAYPL"
     gene            21301..22422
                     /gene="ald"
                     /locus_tag="QGG16_02140"
     CDS             21301..22422
                     /gene="ald"
                     /locus_tag="QGG16_02140"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000286 - alanine dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HJP24106.1"
                     /translation="MEIGVPREIKTAERRVGLTPATAGELVNRGHKVSIETGAGDGAG
                     FNDGAYKEAGAVITGTPDDVFADSEMIVKVKEPLAAERARLQPHHTLFTYLHLAADRP
                     QTDDLLASGATCIAYETVTDDAGRLPLLAPMSAIAGRMSIQAGAHALEATQGGAGLLL
                     GGVPGVRPSKVVVIGGGVVGENAAEMAVGLGAEVTVLDRNPVVLDGLAKRFAGRVKTV
                     YSTKAELDASVFDADLVIGAVLVKGARAPHLVTRDMLGRMRPGSVIVDVAVDQGGCFE
                     TTKATTHTDPTYVVDGVVHYCVANMPGAVSRTSTQALSNATLPFTLALADKGTDAALK
                     ADPHLMNGLNVCAGKVTDRAVAETFDLEYIEPLIALAAR"
     gene            22550..23788
                     /gene="lhgO"
                     /locus_tag="QGG16_02145"
     CDS             22550..23788
                     /gene="lhgO"
                     /locus_tag="QGG16_02145"
                     /EC_number="1.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-2-hydroxyglutarate oxidase"
                     /protein_id="HJP24107.1"
                     /translation="MRRTRAGVTVDVVVIGGGILGLATADALQARLPGTSIVVLEKED
                     VVATHQTGRNSGVIHAGLYYAPGSLKAELATRGGARMVEFCAEHNVAHDRCGKLVVAT
                     SNDEVPRLTALAERARANGVTITDLTAEQAHEHEPHVAAIAAFHVAATGRADFTGVAT
                     ALARRVSAAGGEIRTGVRAGRATSTVTGWRIETDGLPLNARFLVGCAGLHADRVARAA
                     GQRPDARILPFRGEYLDVTGPSADLVRGLVYPVPDPRFPFLGVHLTRGLDDHVHAGPN
                     AVLAMAREGYRWSDASIRDLLGAVAWPGTTRLIGRYWRPGLEELLRSLSRRRFVSAAR
                     RLVPDLDRADLRRAPAGVRAQAVDRRGSLLDDFALVDGDRSLHVLNAPSPAATASLEI
                     GALIADQVAVSFAGPASSIG"
     gene            23845..24771
                     /locus_tag="QGG16_02150"
     CDS             23845..24771
                     /locus_tag="QGG16_02150"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HJP24108.1"
                     /translation="MSETATPETVGFIGLGNMGRPMCHRLLEAGYHIVAYDLVDEALT
                     EVATAGATPASSAAEVAATCDVLLTSLPRPDHVEAVMEGAGALAALRPGSCWVDLTTN
                     RRELVQRLADAAPAGVTVADSPLTGAVDGARNGRLTLFIGGDDTIVARATPILEHLGR
                     VIACGPLGTGNVVKLVTNQLWFIAAAAIGEGFALGMDNGVELSVLWDAITDSVGDSFV
                     ARHDAPSIFAGHYDPSFTLGLCNKDLGLIGELSAALSTDLPMTEAAAATFARAADRYG
                     PDVGELHVARRIEDETSLSFRLDGDWTPPWEQ"
     gene            24782..25669
                     /locus_tag="QGG16_02155"
     CDS             24782..25669
                     /locus_tag="QGG16_02155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24109.1"
                     /translation="MTLSAQPQHPCPIPVAELINLDRHPVDRPDSPRYAALVAETRAK
                     LDDDGCAVIPQLLHGKALPVMSSEILGIRPFLHESKIHINPYFSEGDSSLPKDHAINT
                     FAERSGGFIPRDAFAATSAIDAVYQWPPLLAFIADCLDLPEVYCYADPLAGLTINVLD
                     PGQQFAWHYDTNDFAVTILVDEASEGGLFQYSPNIRTAGDENFDGVRSCQNEDLTTVR
                     TLQIRPGDLQIFRGRFSLHRVTKVADNSPARHTAVLAYTEKPDVIGRLERTRQLFGRA
                     LPAHEEAERNRSRSDELKD"
     gene            25771..27090
                     /locus_tag="QGG16_02160"
     CDS             25771..27090
                     /locus_tag="QGG16_02160"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJP24110.1"
                     /translation="MSDSEQLSYDAIIVGAGVIGSALAFELAKKGWKTLNVDKLPASG
                     YGSTSNSCAIVRAHYSTFDGVAMAYEGFSYWKDWSNYLESEDERGHAVYMQCGTVLFM
                     LEGGHHEKVLPLFDQVGVPYEVLTNEELRERYPFYEHGTHGEPCRPEDDRFWAEPEGK
                     LVGALYTPDSGYVSDPQLASHNLQRAAEAKGGEFRFNTEVVDVRRFDGRVAGITLSNG
                     TEVDAPVVVNVAGPHSFVINKMAGVYDSMNIKTKALRHEVHHVPSPEGIDFEADGLHS
                     SDSDLAIYVRPESGNNILIGSEDPACDPQVWIDDPDDYDTVVSDEQWNAQVLRLARRM
                     PELGVPSEKKGIVDLYDVSDDWIPIYDRTDLDGFYVAIGSSGNQFKNAPVAAYCMAEL
                     IEAVEGGHDHDADPLVVAGVYTGLEMDMGFYRRNREINPNSSFSVNG"
     gene            complement(27135..27809)
                     /locus_tag="QGG16_02165"
     CDS             complement(27135..27809)
                     /locus_tag="QGG16_02165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HJP24111.1"
                     /translation="MPRLRRVRRADLHPGAQPVFQMLFGDRDPIDEPGTPTGTPGDWW
                     STFALVPDVFDHALEGIALYRSPERLLDPKLRELGQTRVGWCVGSRFVYSQHRKACRT
                     VGLTDEQIDAIEAWETAECFDGAERAVLAYTDALSIQHGRVPDGVFDALQAHLTDEEI
                     LELTYIVGTYAMHGAMSRALRLEYDNDPPVLVEEPGDEESLSDEHTRREFRRALRLVG
                     EEPGDG"
     gene            complement(27860..28420)
                     /locus_tag="QGG16_02170"
     CDS             complement(27860..28420)
                     /locus_tag="QGG16_02170"
                     /inference="COORDINATES: protein motif:HMM:NF018028.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HJP24112.1"
                     /translation="MTDAVYPTEPTLEAAAWWTRGKAAIIDALIFFAALIAPMVLTTI
                     GFVVAWDENRDDFDFTAASVLMVILGLGLAAAVVVWGGWLFGYRQGITGLTPGKRRLR
                     IHLVDADTDKVPGGAKGVGRWLVPLLIGFVQGFGTVIQLIDILWPLWDSKNQRLIDKV
                     LKTRVVVGQPSDGTDDGPAPPVSPIS"
     gene            28493..>29140
                     /locus_tag="QGG16_02175"
     CDS             28493..>29140
                     /locus_tag="QGG16_02175"
                     /inference="COORDINATES: protein motif:HMM:NF017532.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HJP24113.1"
                     /translation="MTTHGADRFTTAQVEAFAADGVVHVPGAVDTDLIDEVLALADRE
                     LAHPSPWVTDTADDPVPGRLFTSRYLWRDEPVVNRFAFESGVAELAATCMGSSSARLY
                     FDHLLVKEPRTESPTPWHQDIPYWPFLGQSICSVWVACSASTVEESSLEFVRGSHRWE
                     KYFAPESFDGTAGWTDDFDGEPMPDIESDRDGYDIMGFDVEPGDAIVFSSWIVHGS"
BASE COUNT         5103 a        10082 c         9212 g         4743 t
ORIGIN      
        1 gaccaccaac ggcgggctga cctttgccgg cggtccacac tccaactcgg tcggccaatc
       61 gctggccacc ctcgtgggtc gactccgcga ggttcccgga accggcctgc tgtacgccaa
      121 cggcggatat ctcggcaaac acgccttcgg gatctacggc accgagccgc cggccactac
      181 gttccagtcg atcgatggcg cagccaaggt ggccgaccag cccaccagga cccctgaccc
      241 cgacttcgcc ggagcggcca tcgtgaacgg ctacaccgtc cgccacgacc gccacggtca
      301 accaaccgag gctctggttg ctgccctcac ccctggcagc gacagtaaaa gtgacagcga
      361 cagttcccgg gtgtggggcg gtacaaccga ccgtgccacg ctcgacacgc tgctggacgg
      421 agaccgcgtc ggccagccgt gcgatctaga ccccaccggt ctgatctctc tctgacccaa
      481 ccagagagag cccagccaga gagaacccat tccgagaatc aggagatccc atgcagaccc
      541 cgatcaccga gatgttcgac atcgagttcc ccatcgtggc cttcacccac tgccgtgacg
      601 tggtggtcgc cgtctccaag gccggtggtc tgggcgtgtt gggcgcggtg gcccacagcg
      661 acacccaact ggagaccgac ctagcctgga tcgaagacga gttaggcgac cgcccctacg
      721 gcatcgacct gatcgttccg gcccgctatg ccggatccga cgagggcgga ctctcggtgg
      781 ccgacctcgt gtccactatc cccggtgccc accgcgaatt cctcgacgag ctgctcaagc
      841 ggtacggcgt gcccgaaaat ccggattccg ccggatgggc cgaacgcccc ggtgacgccc
      901 cgttctcggc caaccgggcc gaccggcagc tggacatcgc tctggcccac cgccccgttc
      961 tcgtggccaa cgccctcggc ccgccaccac gagacatggt cgaacgctgc cacgcgaccg
     1021 gcgtcaaggt gggcgccctg gccggcacga aggtccatgc cgaacgccat gtggccgccg
     1081 gcgccgacat catcatcgcc cagggcaccg aaggtggagg ccacaccggc catatcggct
     1141 ccatggtgct gctgcccgag gtagtcgacg cggtggcccc ggtgccggta ctcggcgcgg
     1201 gcggaatcgg gcgaggtcgt cagatggccg ccgccgtggc cctcggcgcg gcaggcgtgt
     1261 ggtgcggctc ggtgtggctg accaccgagg aggccgaaac tcacccggtg gtcaaggaca
     1321 agatgctggc tgccggttca ggcgacacgc ttcgctcacg gtccataacc ggcaagccgg
     1381 cccgcatgtt gcgcaccgcg tggaccgagg agtgggaccg cgacgacacg cccgccccgt
     1441 tgggcatgcc gcttcagcca atgctcaccg gcgcggccat cgatcggatc aaccgtgccg
     1501 cccaccacga gggatcgggc gccgaggacc tggccaccta cttcgtgggc caggtcgtgg
     1561 gcaccatgaa ccgcagccgg ggtgccggcc aggtggtgat ggacatggtc gaggagttca
     1621 tcgacgccgc ccaggccgta gccgcccaac tcgaggtctg aagcggactc agttcccgac
     1681 ggggattcga ttctgagcgg cggccagggc caaccactcg acacggccgt tcgccgtgtc
     1741 cggggccacg ccgaccggcg agacgcagtg gtttagcgtc agggcgccca ctacgactcg
     1801 ggccgcgtca gccactgttg ggcgtcccag acggtggttg gtcggaccgg ctcgacggac
     1861 gtcaggtaac gggccaccag tacccaacat gaccagttcc acgatccacc cccggtgtct
     1921 cccagctcgg tcccggcaat aagggtcagt tcatgttgat gagctgacca ccgtcgacca
     1981 gcacggcgtg accggtcatc cacgaggccg catccgacgc cagaaagagc gccgtgttgg
     2041 cgatgtcctc cggctcaccg agccgcttca tgggaagcgc ctctgcaatg gcgtcgcccc
     2101 tgccgtcctc ccacaacgcc ttggcgaagt cggtccggat aaggcccggg cagactgcgt
     2161 tgacccgcac gcctggaccc acctcagcgg ccagctgttc ggtcaagtgg atgagcgccc
     2221 gcttggtcag gtcgtagacg ccgaggatgg cgttggtacc gaaggcccca accgacgaga
     2281 tgttgaccac cgagccgcca tgctccttca tccaccggtt ccaacacgcc tgggtccaca
     2341 ccagcggggt ggtcagattg gtggcaaacg tcttatccca gcgcggcaca tcaatgtcga
     2401 tgacaggacc ggcataggga ttggtcgcag cgttgttgac cagcacgtcg atggccccga
     2461 aggcctccag tgtgctgtcc agtacccgat ccatatcctc gaccttgcct acgtggccgg
     2521 ccacgtaggc aaggtcaccg ccggtcgaag cccgaagctc ctcgacggtg gtcgcgcacg
     2581 actcctcgtt ccggctggtg atcatcacct tcgcccccgc cgacgccata gccgcggcga
     2641 tgccccgacc gattccccgt gagccgccgg tgacgatggc gaccttgccg tccagtctga
     2701 tgtccatgga cggcgaccct agggggaccc cctctgccta cccgaagcgg gagcggagag
     2761 gctcacgtca gctcatcggc tcagccgacc cggcggtcgt gaccctccca atagggttca
     2821 cggaggatgc gcttgaggat cttgccggac gggttgcggg ggatctcctc gacgaactcg
     2881 accgtcttag ggcacttgaa gccggccagg tgctggcggg cgtggaggag gatgtcatca
     2941 gcggtcaccc ctgaatcggg caccgctatg actagggcct tgccggcctc gccccaccgt
     3001 tcgtcgggta caccaatgac cgccacatcg gcaatcccgt catgggacat gagggcgttc
     3061 tctatctcgg ccgggtacac gttctcgcca ccggagacga tcatgtcctt cacccgatcg
     3121 tggatgtaga ggtagccgtc ctctaggtag gcggcgtcac cagaccgcag ccagccgtcc
     3181 ccgggcagag ccttggccgt ctcctcggga aggttccagt agcccaacat gttcccgccg
     3241 tggcgcatcc agacctcgcc cacctcgccg tcgggcacct cctcgcctgt ctccgggtcg
     3301 acgatcttca tctccatgcc gcggatgggt ttgccagccg accgcaggag cttgggatcg
     3361 gcgtcgcccc catggtcctc gggcggcagg gtggttccgg cgccggtcgt ctcggtcatg
     3421 gcgtacacct ggaagaactc gcagccgaac tgcgccatcg acttgaccag gacgtcttcg
     3481 gtgatcggcg aggcaccgta ggcaatgcgc tccatcgacg agaggtcgat cgagtcggtg
     3541 ggcaccatca ggaagaactg cagcatggcg ggcacgaaga tggcatgggt aatgccctcg
     3601 gtctcgatcc cccgaagtac ccccgccggg tcaaagtcac gcacggtgaa agtggtggcc
     3661 ccgttgacca tcccgaacag cgcccagccg cccccaccaa tgtggaagaa cggcagcact
     3721 gccatgtttc gggattcctc gtccatgtcc cagtccacgg tggcgaatag agcctggaag
     3781 ttggcgttgg tgctctgcac acccttggga tgacctgtgg tgccggagct gtaaagctgg
     3841 gagcagacat cgtcgtcact cgacggggtc ttctcacact cggggccgta ggcgtcgctc
     3901 caggcggcgt acgacgcgtc atcaccacca tcgccgatca ccacgacggt cgtgacatgg
     3961 gctagatcgc cacggaaggc ggccagatgg tcggcgaact cctcgtggat gaccagcacc
     4021 gtggcctgtg aatcattgac gatgtacgcc atctccggcg gggcgagacg ccagttgacg
     4081 gcgacggtca ccgcgtttcg ataggcgcag ccgtacagga cctcgaagta ctcgacagag
     4141 ttcttgtcga tgaacgccac gcggtcctgg ctgcccacgc cctcggcggc caaggcgttg
     4201 gccaccttgc cggcccgggc ctgcatctcg ttccacgaga tccggtcgtc tccaaggacg
     4261 aacatgtcct gatcgccacg ggccgcggct ccaagatcga tgatgtcggc gaaattctta
     4321 accagtgaag agtccatggt cggtgaacct acaccggctc gctcgccccc agaaaggcgt
     4381 acagaagggt tggcggcggc gagattggcc gattgcgggc aggccgctgg accgcaacta
     4441 ccgtccgtcc atggccacca acctgacact cgacatgatg gcttcgcccc tgccgctacg
     4501 acaggtcggc gatctggccc ggcgggccga gtcggcgggc tttggagcca tgtggttcac
     4561 cgagggagcg cggaccgcct cgctgtcgtg cgccgcgtcc gcgttggcca ccgaacggct
     4621 cggcctaggt acggccattg ccgtggcctt cccccgtagc ccgatggtca cggcccagat
     4681 ggcctgggaa ctggccgagg ccaccggcgg ccgctacgta gtcggcctgg gcacccaggt
     4741 gaaggcccac gtggagcgcc gctactccag tccctacgcg ccaccagggc cccgtcttcg
     4801 cgaatatgtc cgggccatga aagccatctt ccgggccttc cggggtgagg agaagttgac
     4861 cttcgaaggc gagcactact cgttcaacct cctaccccga atgtggtcac cgggccccat
     4921 cgatgtcgcc gatccgcccg tctacatctc ggccgtgctg ccgtggatga gccggatggc
     4981 cggcgcggaa tgcgacggaa tccatatcca ccccatgcac tccccgggct ggctcgccga
     5041 cgtgcagctc ccagaggtgg ctgctggcgc ggcgtcggcc gggcggtcaa tgaaagacgt
     5101 gatggtggta tgcccggtga tcatcgccgt cggcgacact gacgaggaga tcgccgcagc
     5161 ccgcgacgcc aatcgagcca ccatcgcctt ctacggatcg acacccaact acgcgccggt
     5221 gctggaacat cacgggttcg acggcctgca gggcgagttg aacgcctgcc agcgatcggg
     5281 cgacatggcc accatgatca gcttggtgga cgacgacgtg ctggaccact acaccgtgtc
     5341 agcgacgtgg tctgacctcg gtggggtgct ggccgaccgc taccggggca tggcccctca
     5401 caccagagtc atgacctaca cggcgctcga ccactggcgc agcgatcccg acctgttgga
     5461 ccgctggtcc gacgtggctc gccacctcgc cgacgccgac tgaccggcca cggctcgcaa
     5521 gagccgccta gaagagcttg gattcctcgg cgttgtcaaa gcgctggacc gacatgccgg
     5581 tcacgccaac ggtcttgagc gccttctgga agtcacccat gtggggggcc gtcatatgcg
     5641 cccccagcgc ctcgtcggac gcccacttct cgaagatcct gatcttgccg gcctctgccg
     5701 ggtcggcact cagcacgtag tcgatgcagc cctcctcggc gtgggtggcc tgcatcaaag
     5761 gaacgacggc ctccaacatg gcgtcgaccc gctcaggatc aatcgatatg gaaccggcga
     5821 tgatgatcat ggactagggc ctccgagggt ctcttggaac ggggcgaagc gtactctcgg
     5881 ccccaatgct tgacggaagc ggagatcctg tggctgaggt cccggttact gaccgctcag
     5941 ccacttacgg agcggtcacc ggcgccgatg gcgtgacccg ctgcccctgg cccggcgacc
     6001 acgccgacta ccgcacctac cacgatgacg agtggggccg accagtggtc gacgacgtcc
     6061 gcctgttcga gaaggcttcc ctggagggat tccaggccgg tctgtcgtgg ctgaccatcc
     6121 tccgtaagcg ggataacttc cgggccgcct tcgccggctt caacccggcg gtcgtggccc
     6181 acttcaccga tgccgacgtg gcgcgatgcc tgggcgacgc gggcatcgtc cgccaccggg
     6241 gaaagatcga gtcgaccatc aacaacgctg cccgcgctct ggagatcatc gaccagttcg
     6301 gttcgctggc cgcctacata tggagcttcg aacccgacag tccggtccgg gccacccaag
     6361 acgacattcc ggccaccacc gcggagtcca ccgcactcag ccacgacctc aagcaccgtg
     6421 gctggtcgtt cgtgggcccg accacgatct acgccctcat gcaggccatg ggcatggtca
     6481 acgatcacct ccccggctgt gacctgcacg ccgtggtggc cgctgagcgg gcggccctcg
     6541 tccgaccggt accgcacgtc gacccggcaa caacaccgtg attcgcctct cagtgctgga
     6601 ccagtcgccg gtgcccgagg gctcgaccgc cggcgatgcc ctgcgaaaca cgctcgacct
     6661 ggcccgtcgc accgaggcca tgggttacca ccggtactgg gtggccgagc accacggcat
     6721 ggccgggctg gccggctcca gccccgaggc gctcatcggc tcgatcgccg gagcaaccga
     6781 ccggattcgg gtcggctctg gcggcgtgat gctcacccac tacgccccgt tgaaggtcgc
     6841 tgagtcattc tgcgtgctgg cttcgcttca cccgggtcgc atcgacctcg gcgtcggtcg
     6901 ggcgccgggc tcagaccatc tcaccgccgc tgccctggcc cgcggtggtg cacgcacgcc
     6961 gctggagaac tacccgaacc aggtccagga actggtcgac ctggtcgacg acacgctgcc
     7021 cgcccatagc ccgatccagg gagtacgggc cacaccccga cccgacgagc cgccggagat
     7081 ctggttgctg gcgtcgagcg ctgactcagc ggcctttgcc gcccacttcg gcctgccgct
     7141 gggctgggcc gatttcatcg cccaggtgga cggcgccccg atcatcgacg cataccgccg
     7201 ccaattccgc ccgtcggccc gctgtgccga accacgggtt ctgttgtgtg ccagcgcggt
     7261 gtgcgccgac accgacgagg aagctgagat catcgtggct gccgtccgga cgtggcgggc
     7321 ctccggcctc cggggaccgg tgcccgccgc ccgtgccacc tcggattccg acgaagcgac
     7381 accgccggtc acaccggcac cgctgacagt ccagccgggc cgccggtcga tcgccaccgg
     7441 cacaccggat cgggtatcga cccggctcac cgagatgaac caggccatcg gcgccgaaga
     7501 agtcatggtg gtcaccatct gccatgacca cgaggctcgc gtccggtcct acgaactgtt
     7561 agcccagcag ttcggcttaa tccctccggc gacgcccgga caatgaccga cgccgctgcc
     7621 caggccatca cgttggccga ccgcatcccg gtggggaccg accccgacct actcctcgac
     7681 ctgttcgtgg actgggccgc cgagcggaac ctggagcttt acgaggccca ggaagaggcc
     7741 atcctcgaac tgctgtcggg cacgcatgtg gtcttggcta cccccaccgg ctcggggaag
     7801 tctctggtgg ctaccgctgc ccatgcagca gcgatggctc ggggggagcg aagcatctac
     7861 accgcaccca tcaaggctct agtcagcgag aaattcttcg ctctagcccg cgacttcggc
     7921 cctgaacacg tcggaatggt caccggcgac gcctcggtca acccgggtgc cccgatcatc
     7981 tgcgccaccg ccgaaatcct cgcccaccag accctccggg aaggggccga gtgcccgttt
     8041 ggcctggtgg tggccgacga gtttcacttc tacggcgacc cccaacgggg atgggcatgg
     8101 caggttcctc tattggagtt gcccaacgcc cagttcctac tcatgtcggc caccctcggc
     8161 ccgacggccc gcttcaccga ggacctgacc cgacgcaccg gccgctcagc agtgacggtg
     8221 gccggcacgg tccgaccggt accgctcacc ttcgaatacc gcgagacccc gctccacgaa
     8281 tcgatcaccg aactggtcga cgtcgaccgt gcgcccgtct acatcgtcca cttcacccag
     8341 aaggccgcct ccgagaaggc ccaggatctt tgcagcctcg atgtgctcac caaagacgaa
     8401 aaggccgctg tgcgctccga ggtgggcggg ttccggttcg acacgccgat cggcaaggac
     8461 ctgaagcggt ttatcggtca tggcatcggc ctgcaccatg ccgggatgct cccccgttac
     8521 cgcctactag tcgagaagct ggcccaggcc ggactactga agctcatctg cggcaccgac
     8581 acccttgggg tgggcgtcaa tgtgccgatc cgcaccgtgc tgttcacaca gctctgcaag
     8641 tacgacggcg tctcgacccg cctgctcggt aaccgggagt ttgcccagat cagcggccgg
     8701 gccgggcgac ggggcttcga cgacgagggc catgtctggg tgcaggcgcc ggtccactgg
     8761 atcgagaacc gccgggccga ggccaaggtg gtggccgacc ccggcaagaa gaagaagttg
     8821 gtgaagaaga agccacccga tcgtggctac gcccactgga acgaggtgtc ataccagaag
     8881 cttgttgacg gcacccctga gccgttgatc tcgagcttcg acgtgaccca ccaaatggtt
     8941 ctcaacatgt tgtcaaggcc aggcgacggc cgacaggaca tgaagcgcct gctgctggac
     9001 aaccacgagc cccgggaccg ccagcgacat cacatccgac gggccatcgg catctaccgg
     9061 tcgttgcgtg atgccggggt gatcgtggaa ctcgaccagc cggacggcca ggggcgtctc
     9121 gtctctgtcg gtatggatct ccagaatcac ttcgctctcc accaaccgct ctcgctgttc
     9181 gctctggagg tcattcccga actggccgac cgcccggagc ccgaacccgc atccgaccct
     9241 gaaccgagcg agaacgctga ggatcagaag caggccgtca ggcaggccgc cagcgaggcc
     9301 gcccgccatg ctgatccgga tgcctcagct cgcgaacacg cgctggacgt gctgtcggtg
     9361 atcgaatcag tgctggagga tccgggcgtg atcatcgccg cccagatcca tcagatgaag
     9421 ggcgagctgg tggcccgtct caagatggaa ggcgtcgagt acgaagagcg gatggaacgg
     9481 ctcgccgaag tcgagcaacc ccgccccctc aaggagttcc tgtacggaac cttcgacgtc
     9541 ttccgaagcc accacccatg ggtgggcacg gagaacgtga agcccaaagc ggtggcccgt
     9601 gagctctacg agactggctt cgacttccgc cagtacatcg aacaccatgg cctgaagcgt
     9661 tctgagggca cggtgcttcg ctacctcggc gaggcctaca aggcactggt ccagacggtg
     9721 cccgaagatt gccgaaccga ggcgatccga gacatcgagg cgtggctggg cgagatggtt
     9781 cgtcaggtcg actccagcct cattgacgag tgggagaagc tccgcaaccc cgaagaccca
     9841 tcgcccgagg gcaaagcagc cgacactggc ccagaacgac ccgacgtgac ccgcaatgcc
     9901 cgggccttca agatcatggt ccgcaacgag gtgttccgct gggtgcagtt gctgtcgcgc
     9961 cgtcgtctcg atgaccacga atccctggcc gaggttcccg cggtcgacga cgcccgccgg
    10021 accggcgctg acgtcgccga ggccattgcc ccctactggg aggagcattc cgtgcttccc
    10081 accgacagcc acgcccgggg aggcacgttc tttgtgctcg atgactctgg tggagtaggg
    10141 gccgcccgct ggccggtcgt ccagaccatt gccgatccca aggggcacga cgagtgggtg
    10201 ctcgagggtc aggtcgacct ggaggccagc cgcgaagaag gccgggccgt ggtccgcctc
    10261 ggtgccatcc gtcggctcta gaactcccgc tcggccacaa aacgggccag gccggtcaac
    10321 tcgtcaactg ctccgacctc cagacctacc ccgtcaatgg cggccagtgc agcgtccagg
    10381 cggcggcggg cttcagcaat cgtgtcctct cggccaccgg ctgcctcgat gacagcagag
    10441 gcccgatcta cgtcatcatc ggagagatcg ccagccacgt tgtagacggc ccggagttcg
    10501 gcggccgctg ttcctccgcc ggacagcacg caggccaccg gcatcgactt cttacgttcc
    10561 cggaggtcgt tgccggccgc cttaccggtc accgacgggt ctccccagat gcccagcacg
    10621 tcgtcgacgg cctggaaggc taggccaagt tcctgcccgt agacctccaa cgcgtcgacc
    10681 tggtcggtgg gcgccccagc aagcacggca ccgaccgatg ccgagtaccc gagtagggcg
    10741 ccggtcttgt cggcttccat ggccaggcag gccgctaggt caacctcggg gaggtcatcg
    10801 aaggccatgt cggcggactg accggcgatc atcgccgtgg tagccgtcaa cagccggatg
    10861 gtggccctca ctcgctcggc tgagggctct ccgccggact gaccagcagg cgtgtcgagc
    10921 agtacttgga aggccaggtt gtgaagggcg tcgcccgaga tcaccgcgtc gtccaccccg
    10981 aagactgccc acaccgtcgg acggtgccgt cgctccacgt cgccgtcgac gatgtcgtcg
    11041 tgcaccagag agaagttgtg caccagttcc acagcggccg ctccgggcac cgccaccgca
    11101 ccatcggcgc ctaccgcctc ggccgatagc actgccaggg caggacgcag gcccttacct
    11161 ggtccggccg tcgacggcga cccattggcc tccacccatc cgaagtggta acgggcgggt
    11221 aggcgaagct cgtcgcacag gcgatccacg gcagccacta gcgccggttc caccaactct
    11281 cgggcccgta cgaggaccgc cggaaccgcc gccatcagtc ccgccggtcg ggcaaaaagc
    11341 gaaaagcgtc gcgtacctca gccacccggg ccggattcac gtcagccatg actacaccct
    11401 cggtgtagtc gacgccctcg gccaccacct cgccggacgg gtccacgatc accgtgtcac
    11461 ccgagtaggt cagcccgttg gcctccccca cccggttgac gcccactacg tacgcctggt
    11521 tctcgatggc ccgggccacc agcaaggcac tccagtggtc gcgccgcgac tcgggccagt
    11581 tggccactac caggtaggcg tcggtgtcca gcgcccgatc ccagaaggcg ttggcgaacc
    11641 gcaggtcgta gcagacgaac agggtcagcc ggaggccgtc gatggtgacg gtgaccggag
    11701 tgtcaccggc ccggtaggcc tcgtgctcgt cggcgaacgt gaacggatga agcttgtcgt
    11761 agtggtgctg ggtgccgtcc gggccgacca gcaggaaccg gttcaccggc agcgccccgg
    11821 gctcgccgtc cggatcgtca cgtgtcggaa tcgatccacc cacccagatg tcgtggaccg
    11881 cggcctgtcc ggccatgaac tgctcggtcg gtccacccgg cggttcggcg atccggtcgg
    11941 cggccagcga gaagcccggt ccgaacatct cggtcagcag gaccatgtcg gccccgtcgg
    12001 cagccgcctc ggcgatcatc ggagccaccc gggtacaggt ggctggcgcg tcctcccagg
    12061 cgatgttgtg ctgcagggcg gcgatcttca tgtgatcagg ctgtcagacg ggacaggcga
    12121 tcgacggctt cgtggagcac ctcgaactgc ttgcagtagg cgaaccggac gatcgaacgc
    12181 ccagccgact catcgtcgta gaagacccgg ttggggatgg ccaccacgcc acaccgcccg
    12241 ggcaggtcac gacagaactc catgccgtcg tcgtagccca gcggtgccac gtcggccgtc
    12301 acgtagtagg tcccctgcgc tggcaacacg tcgaggccta ccgaacgcag cccgtcggcc
    12361 accaggtcac gcttggcaca caggtcgtcg gccagcacgg tgaagtagct gtcacccagg
    12421 gtcagggcgg tcaccatggc ccgctggaat ggggccccgc tggtgaacga caggtgttgt
    12481 ttgacggtgt gcaccgcgtt gaccagctcc gtggggccat gggcccaccc caccttccag
    12541 ccggtcaacc cgaacgactt gccccccgac gagatggtca ccgttcgctc ggccatgcca
    12601 ggaagggtcg ccaacgggat gtggcgggtc gcgtcgtagg tcatgtgctc gtagacctcg
    12661 tcggtcacca ccaacaggtc atgggtgatg gccaggcggg cgatctcggc cagttcggct
    12721 tcggagaaca ccttgcccgt cgggttgtgt ggcgtgttga tcaggatcag tcgcgtggac
    12781 gggttgatga ccgcctcgag ctcgtccggg tcgaacgaat agtcgggcgt ccgcagggtg
    12841 acggctcgcc ggacgccccc ggccagctcg atgaccgccg cgtacaggtc gaagtagggc
    12901 tcgaagacca ccacctcctc acccggttcg acaagggcca tgatcgccgc cccgatggcc
    12961 tcggatgcgc cggtggaaac catgacgtcg ccggggtcga cctgctggcc gtaaaatcgg
    13021 gcctgatggt cggccacggc ccggcgcaac tcggggatgc cccggtcggg cggatactgg
    13081 ttgaagccgt cccggatggc ctggatggcc gccgcggtga cctcggccgg accgtcggtg
    13141 tcggggaatc cctgcccgag gttgatggcc cccgtctcga cggccagcgt cgacatttcg
    13201 gcaaagatag acagccggtg accctgcatc cgcgacacca gatgggcgtt cggacgatcg
    13261 ggcacgacgg tcactcggcg ggataacgct cgagcaactt acgggctatc accatcttct
    13321 ggatctcgct cgtgccctcg ccgatgatca tcagcggggt gtcacggaag tagcgctcca
    13381 cggggaactc ggcggtgtag ccgttgccgc cgtgaatccg cagggcatcg gtggcgatct
    13441 caaacgccgc ctcggaggcg aacagcttgg ccatgccggc ctccatgtcg actcgctcgc
    13501 cctcgtcggc ccgccgggcc gcgtcatacg tcatgagccg ggccgcctga agcttggttg
    13561 ccatctcagc caacttgaac tggatggcct gatgctcgta gatgggcctg tcgaacgttt
    13621 cacgctgctg ggcataccgc atcgccgcct caaacgccgc ttgggctacg ccgacggcac
    13681 gcgaggcaat gttgatgcga cccaactcga gcgccgagag tgcgtactgg cggccgtggc
    13741 cgatgccttc gtcgccgccc agcacgttgg cgtgcggaac cttgtggtct acgtaggaca
    13801 tttcgaccgt ctcgaggccc ttgtagccca gtttgtcgat cttcttggat accgagatgc
    13861 cctcgaaggt ctcgccgggc tccttttcaa ctaacaggca ggtgatgcgg tcgtccggcg
    13921 tgcggaccat caacatgacc agcgaggccc gaacaccgtt ggtgacccac atcttcgtgc
    13981 cgttcaccac ccactcgtcg ccgtcccgct cggccttgca gcgaagggcc ccggtgtcac
    14041 tgcccgcgtc aggctccgac aacgagaagg cggcccggaa cgagccgtcg cacatccgcg
    14101 gcaggagccg ctgcttctgt tcgtcggttc cgaaccggcc gatcatcgtg acgccgatct
    14161 tgtgggtgtt gaggattccg gccagcgaca tgaagccccg cgacagttcc tcgatgatcc
    14221 gggcgtaggt ggtgatgtcg aggcctaggc cgccgtactc ctcggggatg gtcgagccga
    14281 acaggccgaa ctcgcacatc tggtcgaaca tggcctgcgg aaactcgtcg gcatgttcga
    14341 actcggccac gttcgggatg acgtcgcggt ccacccacga tcggatggtg ccgacgatct
    14401 cgtcagccag cgcctgatcg gtcgccatcg gatgactctt tctgttcgat gtctgtctct
    14461 acggatgctc cccggtgagg agcgtgtggg tctacgggcg tgatcttccc agcccgatag
    14521 gggcggggcc accccggcgg gaagccaacc tgtcagtgcg tcgtcgacac cagtgcccgg
    14581 cgaccagtac tgaggaactg gtcggtgaac ccgtctcagg cttcggagcg agctatcgca
    14641 ccgacgctac ccagcaccgg accggtgagg gccaacgccc cggctgccac tgccgcgcag
    14701 aacaggaagc caccgggtcg gtcggtgagc gccaccacgg cccccaccag gaagccaccc
    14761 actgcgatag ccaggtcgaa cgcgatgctg aacgacccga tggcatggct gcgttcgacg
    14821 tcaggtgcac ggtccaccac cagtacgaag agggctggaa acaggaagca ctgtccgagg
    14881 gccatgacca tcgctccggc gtagacgccc gctggttggg tccacaggcc aaggaccaac
    14941 atcccggccg ccgtaaatcc catggacagc cgggtggtgg ccaacgatcc caaccggtcg
    15001 gggatcttcg ctccgaacag tcggactgcc accacgagcc ccgcgaatgc cgcgaacacc
    15061 gtgcctgacg aagcgacgcc cacgtcagcg gcgtgcaggg ccataaaagc caggaagccc
    15121 gagtaggcca gcaggccgac gaacagcatc accccgggac ggatggccgc cgggtggagc
    15181 cgccaccgga acagcggcac gtcgggcggg tcaagcggtc ggcccggtgc agctcgggct
    15241 agcaggaccg gcaccactcc caacacggcg gccaccacga acgcccggtc cggcccaccg
    15301 ttgtccatta gccactcgcc gagggccgga ccaagggcca ggccggtgta gagggtgacg
    15361 gtgaagtagc tagtggcttc gccccggcga tcgggcggcg agaggtcctg aatggccgac
    15421 gagatgccga tgaagaaggc agcctcgccc atgcccagca ccagtcgggc ggccaccacc
    15481 atggtcaccg aggtggcggg caccagtagc aacaacgagg tcgagacccc gactgaaccc
    15541 aaaagtagga ggaatcggcg gcctcgtcga tcgcccagcg gcccaatgag gggccgcagc
    15601 aacgctgcgg aaaagccgaa tgcccccacc gacaggccga cggccacgcc gcctcccccg
    15661 aggtcgtgtt ccacgaaggc cggaacgacc ggccaagtac tgcccagtgc ggtgaagtag
    15721 ccgaacgacg ccaggcacaa cacgaggaat cgtggggtgg ccagccggtc acccgcctct
    15781 ggtccggtcg ttgctggtcc cgccatcggc gcacagtacg gtccagtcgg tgcacaacca
    15841 agattcggac cgtgacctgg tcgacggtga gatcggcggg gacccccacc cgaagaagca
    15901 gtacacgacg ttcgtggccg agcggggaat cgccgctccc cgggcggttg ccttcgacgc
    15961 ggcctgcgcc ctgatcagtg aggcgaccgg aggcccggta gaggacggca gccccgaacc
    16021 ccacggtctg ggtgcccgct tcgagttcac gctcggcgat ctggacctct ccgaagaggt
    16081 catctccttt gagccaccgt ggcgccgggt gtacgaactc tctggcgccc cggtggccct
    16141 ctatcaggga accacggcat tcaccgatca gggcgaccgc tgcctcatgg cttggtcgat
    16201 cgtggtggat cccctagcag acggcgcgtc ggacaccttc ctggcccatg cggaatcgtt
    16261 cctaacccgc ttcgccgacg acgtgaaggc tcgcgctgaa gccgtctgat ccaagccagt
    16321 ctgaaacaac cgggccttag cccaggagag agaacccaca tgcgtatcgc catcaatgct
    16381 tcagccgaac tacagcacac cgacctcggt cgactccgcg ctcacgctgt ccaggccgct
    16441 gaggatggct tctccgggtg gtggctggcc cagacggggc tgatcgacgc cctcacggcg
    16501 ttcaccgcac tggccgacgt cgcccccggc atggagttcg gcaccgccgt catcccgacc
    16561 tttccccggc atccgacagc gctcgccggt caggctttga ccacggcggc ggcccttggc
    16621 gatcgtccgc tggtgctggg catcggcctc tcgcaccgcc cggtgatcga ggacatgctt
    16681 ggcctctcgt tcgagaagcc gatccgccac ctcatcgact acctggaggt actccagcca
    16741 ctactggaga gcggatcggt cgactacgac ggtgaggcgt tcaccgccca catcgcgacc
    16801 ggtcgccccg ccgaccggcc accatcggtg atggtggccg ctctcggtga acaggccctc
    16861 cgagttaccg ggcgccgtac cgacggttcg attctctgga tggtcggcga acggacggtg
    16921 gccaaccaca ttgccccgcg cctgaacgag gccgccgata ccgccggccg atcggcacct
    16981 cgcatcatct gcagcttgcc tacctgcgtg accagtgacg tcgatgcggc acgggccgct
    17041 gcgaacgccg tgttcgagat ctacggcctc ctgccgtcgt accgggccat gctcgaccgt
    17101 gaaggcgcgg ccgggccggg tgacgtggcg gtcatcggca acgaggagca agtagcagcc
    17161 cgcctatcag cgttggccga cgccggggtc accgactttt cagcccttga gttcgggacc
    17221 aaccccgacg agtccgcccg cacccgggcc ctgctcacca gcctcgtgta agcagcctcc
    17281 cgcaacccat cgccggcaac tggcctccgg gaaccggtcg gtcgtcgagg cgaccccaga
    17341 acaccaactg ctcgatgtct cacatctcag cccaggcctc gtcaaggatc cccatcagcc
    17401 gagcggtgac acccggctgg ttccagccga cacactgacc agcatggtgc ttgtcggtca
    17461 ccctgttctc gtctcgtttg ccacagcccg acggtaggga gggggcggcg ctatggtgta
    17521 gtcaaatctg acggaccgtc agaaacgtct caggagtctc catgacgacc atcccccgca
    17581 tcatctcggt cgacgaccac gtggtcgaac cccccgacct ctggacatca cgtctgccgg
    17641 cgaagtacag cgatcgcggc ccccgggtcg agcgcgacac cgccgtgttc aacttcgagg
    17701 gcggcgtctt ctcctacgaa aagggcgttg agggcggtca gatgtgcgac tggtggatgt
    17761 acgacgacct cgtctacccg ttccccaagc tctcagcagc cgccggattt gacgaactcg
    17821 acatcgtccc cgtcaccttc gacgagatcc accccgcggg ctggaagcag gccgaccgcc
    17881 tgatcgccat ggacgagaac catgtcgacg tatcgatctg tttccccaat gtgctacctc
    17941 ggttctgcgg ccaggccttc ctggagcgcg aggacaagga actcgccctg ctctgcgtcc
    18001 aggcgtacaa cgactggatg atcgacgagt ggtgcgccgg cgacggcaac ggccgactca
    18061 tcccgctcac cctcatcccc ctctgggacc ccatcgccgc agccgccgag gtgtaccgct
    18121 gcgccgagaa gggctcgttc gccgtggcct tctcggagaa cccgcacccg cttggtctcc
    18181 cgtctatcca tgacaaggac cgcttctggg accccttcct cctcgcctgt gaggagaccg
    18241 acaccattgt caacatgcac atcgggtcga gctccaagat gccgacgacc tcgccggacg
    18301 ccccgttcgc agtgtcctcg accatcacat tcgctaacgc catgggttcg atgtgcgact
    18361 acatcctttc gggcaccttc gtccggttcc ccaagttgaa gatcgcctac gccgagggcc
    18421 aggtgggctg gatgccctac gtcatcgagc gcatggacaa gatctgggag gaacggggcg
    18481 acgcgagctt cggcatcgac cttcccgagc cgcccagtac gtacatcccg ggacacatct
    18541 ggggctgcat cttcgacgac gagacgggcc tcaagaaccg ggacgtcatc ggcatggacc
    18601 agatctgctt cgaggtcgac ttcccccacg ccgacacgac ctacccccat accctggacg
    18661 tggcgacgaa aatctgtgcc agagcggggc tcgatgacgg cgagatctac aaactgatgc
    18721 ggggcaacgc gatcgaggca tttggcctcc aacgcttcgg catcaccgcc tgattgctca
    18781 atctccggcg gggcaccggt agcccggaca ggggatcgga atcaggaacg ggtgaaggcg
    18841 gggctgaagg cgtcgcgggg cacctcgtca agcgccgtgg ccacctcctc gaccgacggg
    18901 ccgatgcgat cggccaacgg ggccagggca tccatgtcga tccggtagac cttcgatgcg
    18961 ttctcggcaa agaccttccg caggtcggcc tcgtcccagt cgctgaacga ccgacgcagg
    19021 tgcagccggt tgtaggggaa ggtgctctcg ttgtgtgggt aatcgcttcc ccacatcatc
    19081 cggtcgacgc cgaccttctt catcgccgag gcctctgacg gactggggaa gctggccccg
    19141 atccagacgt tgcgtgcgaa atagtcgctc ggcttgtcgg gtagtaccag ttcggccggg
    19201 aagcccaact cgccgacccg gcctgacgcc atctgggcgt ggtagccgtc catccttcgt
    19261 aggtcctcga tcacccaacc cacaccctgt tcggtcatca catagcggag ttcggggaac
    19321 cggtcgaaga cgcccgacat gatcaggtgc gacaggtttc ggtgggcgaa gaacggcacc
    19381 tccaacagga acatgaggct ggctgccggg gcatcgccgt agctggggtt gcccgatcca
    19441 ccgtgctggg tgatggtcag gtcgaggtcg cgacacgccg cccacacacg gtcgtacacc
    19501 gggtggtaga gcccgggcat acccgaatcc ggcggcaccg ctgggagcat gaagctggag
    19561 tggccgttgg cagccgccag ctcgaggtcg gcaatggtgt cgtcgaggtc gttaagaaac
    19621 acctggggca gcccgcagcg acgctccggg tgggcggcgc agaagtcggc caaccagcga
    19681 ttgtgagtcc ggatgccctc caggcgccgc tcgtactcgt cccggtcggt ggccgggtag
    19741 gtgatgagcg ctccggtcgg gaagaacggc ggcacggtgt tggggaaaac gatctcggcg
    19801 gccacaccct cggcatcgag atcgccattg cgccgatcgt catcccagtt gcgcgaccgt
    19861 ccgtcgtcct gcaggtcgcg gaacgggttc cgataggcac cccgccactc ggcaaacgcc
    19921 tcacggtacg acggggagag gtactcctcg taggccttca tgttgccgcc ggcgtggcag
    19981 tccgacgaga tcagggtgta gttggtgctc atgactatgc atcgtagaca tttgcctatg
    20041 atcatgcaac cccggctatc gttagtgcat ggcacgcaag cgggggcttg gacgcgatga
    20101 cgtggtcact gccggtctgg ccgtcctcga ccacgccggc atcgacgcgg tgagccttgc
    20161 cgccgtagcc gaacgactcg atgtgcgccc tccgtcgttg tacgcccacg tcgacgggct
    20221 ggccggcctc aaacgcgatc tcgcccatac gacgaccgtc gagttcggag aggtattacg
    20281 cgattcggtg ctcggtcgca gtggccccga cgccgtccgg tcgtttgctg acgcctaccg
    20341 aaggtgggcc accgggttcc ccgggcgcta cgagatgacg ctgctcccca tcgccgccga
    20401 tgacgacgaa cgtcgggccg gtgcccgcct ggccctcggc gccgttcagg ccgtgatccg
    20461 gggcttcggc atcgacgaaa cgtcagccat tcaggccggg cgctcgctcc ggtcggcctt
    20521 ggacggattc tcccgtctcg agaacgccga caacatggga cgcggcgacc acgacgcaga
    20581 ctttgccttt ctcatcgacc tactcatcga tggcatcagc caggctggca cccagccccc
    20641 gggcccggcc tagagcggat acgcggtccg ggcgcagatc ggacggagag cgaaactcga
    20701 caccatccgg gccacccccg gcaactgggc gaggtgggtt cggtggagca cctcgtagtc
    20761 ggccacgtcg tgaaccacca cgtggaccag atagtcgaag tcgccggcca tcaggtggca
    20821 gctcaggatc tccggccggc gggtaaccgc ttgttcgaac gcttcgaggg tggtttcgtc
    20881 ctgacccgtg agcgtgatct ccacgaacac gtcggttccc aggcccacag ccgacggatc
    20941 aacgagagcc acgtaccggt cgatcaggcc gacttcctcc agacgccgga cccgccgcag
    21001 gcaggctgac ggagagaggt gaacggcctc agacaggtcc acgttggcta tccggccatc
    21061 cttctggagt agacctagaa tggcacgatc cacggcatcc atgaccgaca gtgcatctga
    21121 catgcctcta atcctatttc aacgcaatca aattgtgtct catgcccttt ttacgccgaa
    21181 ctccacaatc aaacagcgtg gcccgatccc taccgttacc ccatcggaaa gcggattgct
    21241 gtccaccgaa cgcccggcag ccaccggaac gaccaccaga accaatcaca ggagcgcacc
    21301 atggagatcg gagtccccag agagatcaag acggccgagc ggcgggttgg gctcaccccg
    21361 gccaccgccg gtgaactggt gaaccgaggc cacaaggtct ccatcgagac cggtgccggc
    21421 gacggcgccg gcttcaacga cggcgcctac aaggaggccg gcgcggtcat caccgggacc
    21481 cccgacgacg tcttcgccga ttcggagatg atcgtcaaag tcaaagagcc cctcgccgcc
    21541 gagcgggccc gcctgcagcc tcaccacacc ctcttcacct atctccacct ggcagccgat
    21601 cgcccccaga ccgacgacct gctagccagt ggagccacct gcatcgccta tgagacggtg
    21661 accgacgatg ccggccgcct gcccctgttg gcccccatgt cggccattgc cggtcgcatg
    21721 tccatccagg ccggcgccca cgcgctcgag gccacccagg gcggtgccgg gctactgctg
    21781 ggcggtgtgc ccggcgtgcg ccccagcaag gtcgtggtca tcggcggtgg tgtggtcggc
    21841 gagaacgccg ccgagatggc cgtcggcctg ggcgccgagg tcaccgtgct ggaccgcaac
    21901 cccgtcgttc tcgatgggct agccaagcgt ttcgctggcc gggtcaagac cgtgtactcc
    21961 accaaggccg aactggacgc ctcggtgttc gacgccgacc tcgtcatcgg tgccgtgctg
    22021 gtcaagggtg cccgagcccc ccatctggtc acccgcgaca tgctcgggcg catgcggccc
    22081 ggctcggtca tcgtcgacgt ggccgtcgat cagggcggct gctttgagac caccaaggcc
    22141 accacccaca ccgacccgac gtacgtggtc gacggggtcg tccactactg cgtggccaac
    22201 atgccgggtg cggtgtcacg cacctcgacc caggcactct ccaacgccac cctgccgttc
    22261 accctggcgc tggccgacaa gggaaccgac gccgcactca aggccgaccc gcacctcatg
    22321 aacggcctca acgtgtgcgc tggcaaggtg accgatcgag ccgttgcaga gacgttcgac
    22381 ctcgagtaca tcgagccgct gatcgccctc gctgcccggt aggacctcca cactgcggtc
    22441 gcccccctgg agcgaccgac cgtcgagaca acccggcatc gaacgcccca cgaatgtggt
    22501 gatctggcgc cggggtcttc cattttcgac cggggctagc gtccgaccca tgaggagaac
    22561 ccgcgccggc gtcacggtgg atgtggtggt aatcggcggc gggatcctcg gactggccac
    22621 cgccgacgcc cttcaggccc gtctgcccgg cacgtcgatc gtcgtcctcg agaaggagga
    22681 cgtggtcgcc acccaccaga ccggtcgcaa cagcggcgtc atccacgcgg gcctctacta
    22741 cgccccggga tcactcaagg ccgagttggc cacacggggc ggggcacgga tggtcgagtt
    22801 ctgcgccgag cacaacgtgg cccacgaccg gtgcgggaaa ctggtggtgg ccacctccaa
    22861 cgacgaggtg ccccgcctga ccgcgttggc ggagcgggcc cgggccaacg gtgtgaccat
    22921 cactgacctg accgctgaac aggcacacga gcacgagccc cacgtagcag cgatcgcggc
    22981 ctttcatgtg gcggctacgg ggcgggccga cttcaccggt gtggctactg ccctggcccg
    23041 acgggtcagc gccgctggtg gcgagatccg caccggggtt cgggccggac gcgccacctc
    23101 cacggtcacc ggctggagga tcgaaaccga cgggctaccg ctcaatgccc ggttcctcgt
    23161 gggctgcgcc ggactacacg ccgaccgggt ggccagggcc gccgggcaac gccctgacgc
    23221 ccggatcctc ccgttccgtg gcgagtacct cgacgtaacc ggaccgtcag ccgacctggt
    23281 tcggggcctc gtctatcccg ttcccgaccc ccgcttcccg ttcctcgggg tacacctcac
    23341 ccgggggctc gacgaccacg tgcacgccgg tcccaatgcc gtgcttgcca tggcccgcga
    23401 gggctaccgg tggtccgatg cctcgattcg cgacctgctc ggcgcggtgg cctggccggg
    23461 cacgacccgc ctcatcggcc gctactggcg gcccggactc gaagagttgc tccggtcact
    23521 cagtcgccga cggttcgtgt ccgccgcccg acggctcgta cccgacctcg acagggctga
    23581 cctccgacgg gcgccagccg gggtgcgtgc ccaagccgtg gaccgccgtg gctccctcct
    23641 cgacgacttt gcgttggtcg acggagaccg gtcgctacac gtgctgaacg ccccctcacc
    23701 tgcagctacc gcgtccctgg agatcggcgc actaatcgcc gaccaagtgg ccgtttcgtt
    23761 cgctggtccc gcttcctcta tcggttgagt agaggacgag actggacgcc atgacgacca
    23821 ccgacctgtc ctaaggagaa acccgtgtcc gagaccgcca caccagaaac ggtcggcttc
    23881 atcggtctgg gcaacatggg tcgacctatg tgccatcgac tgctggaggc cggataccac
    23941 attgtcgcct acgacctggt cgacgaggca cttaccgagg tggccaccgc cggagccacc
    24001 cccgcatcca gcgcggccga ggtggccgcc acctgcgacg tgctcctcac ctcgctgccc
    24061 cgccccgacc acgtcgaggc cgtcatggag ggagccggcg cgctagctgc gcttcgtccc
    24121 ggctcgtgct gggtcgacct gaccaccaat cgccgtgagc tggtccaacg cctggccgat
    24181 gctgcgcccg ccggggtcac ggtggccgac tcaccactca ccggcgcagt cgacggagcc
    24241 cgaaatggcc ggctcacttt gttcatcggt ggcgacgaca cgatcgtcgc ccgggccaca
    24301 cccatcctcg agcatctcgg gcgggtcatc gcctgcggcc cactgggcac cggcaacgtg
    24361 gtgaagttgg tgaccaacca gctgtggttt atcgccgcgg cggccattgg cgaggggttc
    24421 gccctcggta tggacaacgg ggtcgaactg tcggtcctgt gggacgccat caccgacagt
    24481 gttggtgact cattcgtggc tcgccacgac gccccgtcga tcttcgccgg ccactacgac
    24541 ccgtcgttca ctctcggcct ctgcaacaag gacctcggac tcatcggtga actttcggcc
    24601 gcactgagca ccgacctccc gatgaccgaa gcggcagccg ccaccttcgc ccgggccgcc
    24661 gaccgctacg ggccggacgt cggtgaactc cacgtggccc gccgcattga ggacgagacc
    24721 agcctgtcgt tccgcctcga cggcgactgg acgccaccgt gggagcagta ggaggccacc
    24781 catgaccctc tccgcccagc cgcagcaccc atgcccgatt cccgtcgctg aactgatcaa
    24841 cctcgaccgg catcccgttg accgtcccga ctccccccga tacgccgcgc tggtcgccga
    24901 gactcgggcc aaactcgacg atgacggctg tgcggtgatc ccccagttgc tccacggcaa
    24961 ggcgttgccc gttatgagct ccgagatcct cgggatccga ccgttccttc acgagtcgaa
    25021 gatccacatc aacccatatt tttccgaggg tgactcatcg ctacccaagg accacgccat
    25081 caacacgttc gccgagcggt cgggtgggtt catcccccgt gatgccttcg ctgccacgag
    25141 cgctatcgac gccgtctacc agtggccacc gctgctggcc tttatcgccg actgtctgga
    25201 cctcccggag gtctactgct acgcagatcc gctggccggc ctgaccatca atgtcttgga
    25261 ccccggccag cagttcgcct ggcactacga caccaacgac ttcgcggtaa ccatcctcgt
    25321 ggacgaggcc tccgagggcg gattgttcca gtactcgccc aacatccgga cggccggaga
    25381 cgagaacttc gacggtgtcc gttcctgcca gaacgaggac ctgacgacgg tccgaacgtt
    25441 gcaaatccga ccgggcgacc tccagatctt ccgcggccga ttctccctcc accgcgtgac
    25501 caaggtggcc gacaactcac cggctcggca caccgcagtg ctcgcataca ccgagaagcc
    25561 ggacgtgatt ggccgcctcg agcggacgag acaactgttc ggccgggccc tccccgccca
    25621 tgaagaggcc gaacgcaatc ggagcagaag cgacgaattg aaggactgac agcccttccg
    25681 ttggccgcca gatccatcta gcgtccggcc atcgagcggc aacgccgtca ctgggcgaca
    25741 cagccgcacc tgatttccgg agcagaagca atgagcgact cagaacagct gtcctacgac
    25801 gcgatcatcg tcggcgccgg ggtgatcggt tccgccttgg ccttcgagtt ggccaagaag
    25861 ggttggaaga ccctcaacgt cgacaagttg cccgcctcgg gctacggctc gaccagcaac
    25921 tcctgtgcca tcgtgcgtgc ccactactcc accttcgacg gggtagccat ggcctacgag
    25981 ggtttctcct actggaagga ctggtcgaac tatctcgaga gcgaggacga gcgcggccac
    26041 gccgtttaca tgcagtgcgg caccgtgctg ttcatgctgg aaggcggcca ccacgagaag
    26101 gtcctacctc tgttcgacca ggtcggcgtg ccctacgagg tcctcaccaa cgaggagctc
    26161 cgggagcggt acccgttcta cgagcacggc actcacggtg agccgtgccg ccccgaggac
    26221 gaccgcttct gggccgagcc ggaggggaag ctggtagggg cgctgtacac cccggattcg
    26281 ggctacgtgt ccgacccgca gctggccagc cacaacctgc agcgggccgc ggaggccaag
    26341 ggtggcgagt tccgcttcaa taccgaggtg gtcgacgttc gccgcttcga cggtcgggtg
    26401 gctggcatca cgctgtccaa cggcaccgag gtcgacgccc cggtggtggt caacgtggcc
    26461 ggcccacact ccttcgtcat caacaagatg gctggcgtgt atgactcgat gaacatcaag
    26521 acgaaggcgc tgcgccacga ggtacaccac gtgccctcac ccgagggcat cgacttcgag
    26581 gccgatggcc tgcactcgtc ggattcagat ctggccatct acgtccgacc cgagtcgggc
    26641 aacaacatcc tgatcggctc tgaggaccct gcgtgtgacc cgcaggtctg gatcgacgat
    26701 ccggacgact acgacaccgt ggtgtctgac gagcagtgga acgctcaggt gcttcgcctg
    26761 gcccgccgta tgcccgagtt gggtgtgccg tcagagaaga agggcatcgt cgacctgtac
    26821 gacgtgtccg acgattggat tcccatctac gaccggaccg atctggacgg cttctatgtg
    26881 gcgatcggct caagcggcaa ccagttcaag aacgccccgg tggccgcgta ctgcatggcc
    26941 gagctgatcg aggcggtcga gggtggccac gaccacgatg ccgatccgct ggtggtcgcc
    27001 ggtgtgtaca ccggactcga gatggacatg ggcttttacc gacgaaaccg ggaaatcaac
    27061 ccgaactcgt cgttctcggt gaacggttga gttcggggta aacgctccac cgacgggggg
    27121 cgagaaccgg tggctcagcc gtcgccgggt tcctcgccga cgagccgcag agcccgtcga
    27181 aactcccgac gggtgtgctc gtcgctgaga ctctcctcgt caccgggctc ctcgacgagc
    27241 accggcgggt cattgtcgta ctcgaggcgc aacgcccggc tcatggcccc gtgcatggcg
    27301 tacgtcccca cgatgtaggt cagctcaagg atctcctcgt cggtgagatg ggcctgaaga
    27361 gcgtcgaaca cgccgtccgg tacccgcccg tgctggatcg acagggcatc ggtataggcc
    27421 aagacggccc gttcggcacc gtcgaagcat tcggcggtct cccacgcctc gatggcgtca
    27481 atctgctcgt cggtcaggcc aacggtgcgg cacgccttgc ggtgctgtga atagacgaac
    27541 cggctgccca cgcaccatcc gacccgtgtc tgaccaagct cacgtagctt cgggtcgagg
    27601 aggcgctcag ggctccgata cagggcgatg ccctccaggg cgtggtcaaa cacgtctggc
    27661 acaagggcga aggtggacca ccagtctccg ggagtaccgg tcggcgtccc gggctcgtcg
    27721 atcgggtcgc ggtcgccgaa gagcatctgg aacacaggct gggcgcccgg atggagatcg
    27781 gcccgtcgga ccctccgcag tcgtggcatg gccggaggtt aggactctcc tcctgcccgc
    27841 ctcccagcgg gcgactgcgt cagctgatgg ggctgaccgg aggcgctggc ccgtcgtcgg
    27901 tcccgtcgga cggctgcccg accaccactc tggtcttgag caccttgtcg atgaggcgtt
    27961 gatttttcga gtcccacagc ggccacagga tgtcgatgag ctggatcacg gtgccgaagc
    28021 cctggacgaa accgatgagg aggggcacca gccagcgccc cactcccttg gccccgccgg
    28081 gcaccttgtc ggtgtcggcg tcaacgaggt ggatccgcag acgacgcttg cccggcgtga
    28141 gcccagtaat gccctgccgg tagccgaaca gccaaccacc ccaaacgacc acggcagccg
    28201 ccaatcccag gccgaggatg accatgagca ccgaggccgc agtgaagtca aagtcgtccc
    28261 ggttttcatc ccacgccacg acgaatccga tggtggtcag gaccatcgga gcgatcaagg
    28321 ctgcgaagaa gatcagtgca tcaataatgg cggccttgcc gcgggtccac caggcagcgg
    28381 cctcgagggt gggttcggtt ggatacacgg catcggtcat aacccaaggc tattggtccg
    28441 gggtggggac cggtaagggc caccgacccg gcacctgtcg tacggtgcgg ccatgaccac
    28501 ccacggagcc gacaggttca ccacagccca ggtcgaggcc ttcgccgccg atggggtggt
    28561 ccacgtgccg ggtgccgtgg acaccgacct gatcgacgag gtgctcgccc tggccgaccg
    28621 cgagctggcc catcccagtc cgtgggtgac cgacacggcc gacgacccgg tccccggtcg
    28681 gcttttcacg tcgcgctacc tgtggcgtga cgaaccggtg gtgaatcgat ttgccttcga
    28741 gtcgggggta gccgagttgg ccgctacctg catggggtcg tcatcggctc gcctctactt
    28801 cgaccatctg ctggtcaagg aaccgaggac cgagtcgccc accccatggc accaggacat
    28861 cccatactgg ccgttcctcg gtcagtcgat ctgctcggtg tgggtggcct gttcggcgtc
    28921 caccgtcgag gagagttcac tggagttcgt tcggggttcg caccgctggg agaagtactt
    28981 cgcccccgag tcgtttgacg ggaccgccgg atggaccgac gacttcgacg gcgagccaat
    29041 gcccgacatc gagtccgacc gggacggata cgacatcatg ggcttcgacg tggagccggg
    29101 tgacgccatc gtgttctcat cgtggatcgt ccacggttca
//
LOCUS       DASCMR010000085         3580 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000465859, whole genome shotgun sequence.
ACCESSION   DASCMR010000085 DASCMR010000000
VERSION     DASCMR010000085.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3580)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3580)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3580
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000465859"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(166..381)
                     /locus_tag="QGG16_02180"
     CDS             complement(166..381)
                     /locus_tag="QGG16_02180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24114.1"
                     /translation="MPDATRDELEATFSEFARSADMIAFPVHWHLVNERRGTVVAQSG
                     NRLRDPGKGHIHEPWNLTVLTYGGNGR"
     gene            complement(425..499)
                     /locus_tag="QGG16_02185"
     tRNA            complement(425..499)
                     /locus_tag="QGG16_02185"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(464..466),aa:Arg,seq:ccg)
     gene            complement(567..1466)
                     /locus_tag="QGG16_02190"
     CDS             complement(567..1466)
                     /locus_tag="QGG16_02190"
                     /inference="COORDINATES: protein motif:HMM:NF042637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6569 family protein"
                     /protein_id="HJP24115.1"
                     /translation="MTITPLDSAPIGPPITRGGISIYPVYLPGNALLPIGTGRESGLT
                     IDELPDAQVPHLVVHNPTDRPILIVEGEQFVGGRQNRTANASVLVPAGETREIPVSCL
                     EVGRWGEHRAFEHAPTFTPRRVRRTKQREVARSMAEAGVRSGDQQQVWQAIQVEMNSM
                     AAPSSTGAVADADQVFARDGHRQAAVDELVTRGPLTGQCGIIVAHGWRAIAAEVFGSP
                     ELLAAHWAPLVRSHLLEHPTATGQRSATGAMKLLRRFAEAKSVDSPGLGLGTEHHVNA
                     ERVTGQALTLDGALVHAGVFRRG"
     gene            complement(1582..2391)
                     /locus_tag="QGG16_02195"
     CDS             complement(1582..2391)
                     /locus_tag="QGG16_02195"
                     /inference="COORDINATES: protein motif:HMM:NF012321.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vWA domain-containing protein"
                     /protein_id="HJP24116.1"
                     /translation="MTTNETYIARLRKLIAEAPDGLDVGPLEVALASAEAALASSDST
                     GDRTKIWFLLDRSGSMGYLTDDVIGGFNEFLKQQKAQPGKARMSVVLFDGQNPYEVVV
                     DGRRIAEVPALTPAIYQARSSTPLFDALGTLLGKADQRIAQRAETGRKAEDQLVLIFT
                     DGHENASRRYDRARIFEMIKDRQDTGNWTFVFMGANQDSYAAGGGVGFGDGNIQDFAA
                     TPASVRDSFSEFTRSTVAYRGKPRRQRMHDRHDFFEGQKLAEQALREQDRN"
     gene            2551..3426
                     /locus_tag="QGG16_02200"
     CDS             2551..3426
                     /locus_tag="QGG16_02200"
                     /inference="COORDINATES: protein motif:HMM:NF012514.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HJP24117.1"
                     /translation="MSTSDINISDGDGSGDSSLSDYDPSAYPPFAVTVDVVVFTIVDD
                     VLQVVLVRRGEPPFKDRWALPGGFVREDEAPREAARRELAEETKLGLKPDKLEQLRTY
                     GEPDRDPRMRVVTVAYWTIQADVGDLAGGGDAAEAALVPVVEIEREERKLAFDHRTIV
                     LDAVDRARSRLEYSTEASRFCPPEFTIRQLRRVYEAVWGTEFDQGNFQRKVRSEPDFV
                     RDLGRTTDPSGSRGRPAALFSAGEVSRLEQPFLAMRSESRAMPPPRSRPSDDYPSWLV
                     ESENQEPDEQAGEKE"
BASE COUNT          550 a         1069 c         1273 g          688 t
ORIGIN      
        1 cactggaagg tccacttctt gcggggtgtg gccatcgccg gtcaccctac ctatggtctc
       61 ttctgggctt gggggttagg ttcaggaata gacgtcgcgt gcggccaccc aggccatgac
      121 ctcgttgccg aaatgggtca cgtcgtagat gtcccgctgg cctgctcagc ggccgttgcc
      181 cccgtacgta agcacagtca ggttccaggg ttcgtggata tggcctttgc cggggtctcg
      241 cagacggtta ccggactggg cgaccaccgt gccccgacgt tcgttgacca ggtgccagtg
      301 gacggggaag gcgatcatgt cggcactccg ggcaaactcg gagaaggtgg cctcgagttc
      361 gtcgcgtgtt gcatcaggca tggggtgaat ccggtcgtca ccgtgtctgg ctcttcgtgg
      421 tgtctggcgc ccctgacagg actcgaacct gtgcacacgg ctccggaagc cgatgctcta
      481 tccgctgagc tacaggggct ggaacgggtc aggttaccgg accgctccat ggccccaccg
      541 gccgataccg gtggggcctg atggagtcag ccccgccgga agacccctgc gtgaactaac
      601 gctccgtcca aggtcagggc ctgtcccgtg acccgctcgg cgttcacgtg gtgttcggtg
      661 cctaggccga ggccagggga gtccactgac ttggcttcgg cgaagcgccg aagcagcttc
      721 atggcgccgg tggccgaccg ttgaccggtg gctgtggggt gctccagaag gtgcgaacgc
      781 accaacggag cccagtgggc ggccagcagt tcaggagagc cgaacacctc ggcagctatg
      841 gcccgccagc cgtgggccac gatgatgccg cactgaccgg tgagcggtcc acgggtcacc
      901 aactcgtcta cggcagcttg gcggtgtccg tctcgtgcga agacctggtc ggcatctgcc
      961 accgctccgg tgctcgacgg cgcagccatg ctgttcattt cgacctggat ggcttgccag
     1021 acttgctgct ggtcgccgga ccgcacgccg gcctcggcca tgctccgggc cacctcgcgc
     1081 tgcttggttc ggcgcacccg gcggggggtg aaggtcgggg cgtgctcgaa ggcccgatgc
     1141 tcaccccagc gtcctacctc gaggcacgag acggggatct ctcgcgtttc gccggctggc
     1201 accagcacgc tggcgttggc ggtgcggttc tggcgtccgc ccacgaactg ctcgccctcg
     1261 acgatcagga tgggtcggtc ggtggggttg tggaccacca ggtgggggac ctgggcgtcg
     1321 ggtagctcgt cgatggtcag gccggattcc cgtccggtgc cgatggggag cagggcgttg
     1381 ccgggtaggt agacggggta gatcgagatc ccaccgcggg tgatgggcgg cccgatgggg
     1441 gcggagtcga gcggggtgat ggtcaaggtg tctcctcttg tcggttgtgc tggtctgttg
     1501 tttggctagt gatgtgatgg gagagggaag gccgccggcc gggtccgtcg acccgaccgg
     1561 cctgccctcg gggaggcccg atcagttccg gtcttgctcc ctgagagcct gttcggcgag
     1621 cttctgaccc tcgaagaagt cgtgccggtc gtgcatccgc tggcgcctgg gcttgccccg
     1681 gtaagcaacc gtgctacgtg tgaactccga gaaggagtcg cgcacgctgg ccggggtggc
     1741 ggcgaagtcc tggatgttgc cgtcgccgaa accgacgcca ccgcccgccg cgtaggagtc
     1801 ctggttggcg cccatgaata cgaaggtcca gttgccggtg tcctgacggt ccttgatcat
     1861 ttcgaagatc cgggcccggt cgtaccgtct cgaggcgttc tcgtggccgt cggtgaagat
     1921 gaggaccagc tggtcctctg ccttccggcc ggtctcggca cgctgggcga tcctctggtc
     1981 ggcttttccc aggagggtgc ccagggcgtc gaacaggggc gtggagcttc gggcctggta
     2041 gatggcgggc gtcaacgccg gaacctcggc gatgcggcgg ccgtcgacca ccacctcgta
     2101 gggattctgg ccgtcgaaca ggacgaccga catccgggcc ttccccggct gggccttctg
     2161 ctgcttcagg aactcgttga acccaccgat cacgtcgtcg gtcaggtagc ccatggaacc
     2221 ggagcggtcc agtaggaacc agatcttggt gcggtcaccg gtggagtccg aactggcgag
     2281 ggcggcctcg gctgatgcca gggcgacctc cagtgggccg acgtcgaggc cgtcgggtgc
     2341 ctcggcgatc aacttgcgga gccgtgcgat gtaggtttca ttcgtcgtca tgtgtgtgtc
     2401 ctgtctctct tccctgttcc tggacgggcc ccggtccggg ttcccgtttc tgacacctgt
     2461 ttaccgagcc cctgtgacag tccatgttga tgctgtgtgt gttgatgctc tatattgtgt
     2521 cagtatcact atataggaga atagacaata atgtcaacct ctgacataaa tatctcggac
     2581 ggtgatggct caggtgattc gtcactgagc gattacgacc cttccgcgta ccctccgttc
     2641 gcggtcacgg ttgatgtggt ggtgttcacc atcgtcgacg acgtgctcca ggtggttctg
     2701 gtgcggcggg gcgagccgcc gttcaaggat cgctgggcgc tacccggtgg gttcgtccgt
     2761 gaagatgagg ctcctaggga agctgcgcgt cgggagttgg cggaggagac gaagctcggc
     2821 ctgaaacccg acaagctcga gcaactccgg acctacgggg agccggatcg ggatccgagg
     2881 atgcgggtgg tgaccgtcgc ctactggacg atccaggccg acgtcgggga cctggccggt
     2941 ggtggcgatg cggctgaggc cgctctcgtt cccgtggtcg agatcgagcg ggaggagcgg
     3001 aagctggcct tcgaccaccg gaccatcgtc ctggatgctg tcgaccgggc caggtcgagg
     3061 ttggagtact cgacggaggc cagccgcttc tgtcctcccg agttcaccat caggcaacta
     3121 cggcgggtgt acgaggcggt gtgggggacc gagttcgatc agggcaactt ccagcgaaag
     3181 gtgcggtccg agccggactt cgtgcgggac cttgggcgga ccaccgaccc gagtggctcc
     3241 agaggacggc cggcggccct cttctcggct ggtgaagtct caaggctcga gcagccgttc
     3301 ctggccatga gatcggagtc gagagcaatg ccgccccccc gaagccgacc cagtgatgac
     3361 tatccgtcgt ggctggtcga atccgaaaat caggaaccgg acgagcaggc gggcgagaag
     3421 gagtaggacc gatgatcgat actcagagtg accgggaccc ggagcgtgcc ggcgagccag
     3481 tggagttcgt ggcgaacggg ccgacggctg ggggctacct ggccgttcca gcgtcgggct
     3541 cggggcccgg ggtgcttgtg atccaggaat ggtggggcct
//
LOCUS       DASCMR010000086         3575 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000468717, whole genome shotgun sequence.
ACCESSION   DASCMR010000086 DASCMR010000000
VERSION     DASCMR010000086.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3575)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3575)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3575
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000468717"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..753)
                     /locus_tag="QGG16_02205"
     CDS             complement(<1..753)
                     /locus_tag="QGG16_02205"
                     /inference="COORDINATES: protein motif:HMM:NF012398.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HJP24118.1"
                     /translation="MQPESVVTYGADGPVGSGSGVADLARRAKAAAPSLAVATTEVKN
                     AALLAAADRLQADVADLLDANAEDVARGEAEGMPAGMVDRLRLDEVRVAGMASGLRQV
                     ADLEDPVGQVTSEWTRPNGLHVSRVRVPLGVVAIIYENRPNVTSDAFGLCLKSGNVAF
                     LRGSSGALTSNRAIAVSIRSALVDVGLPADALVLVEDGSREAAVEFMQQRGFVDCLIP
                     RGGPSLIRSILDNATVPYVIDGDGNCHVYVDEA"
     gene            789..2462
                     /gene="murJ"
                     /locus_tag="QGG16_02210"
     CDS             789..2462
                     /gene="murJ"
                     /locus_tag="QGG16_02210"
                     /inference="COORDINATES: protein motif:HMM:TIGR01695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HJP24119.1"
                     /translation="MAVDRIGHPKDEGSSSAVAAGILLSKLAGLARESLLRSVLALGP
                     AADAFAAALRIPNLLQNLLGEGSLSASFIPVYSRLLGEGRRDEAGKVAAAVAGLLTAL
                     AGGLVVVAIVVARPLATLLAPGFKGARLDLTVDLLRITTGGLGLLVLSAWCLGILNSH
                     GRFFLPYVAPVLWNVAQIAVLVAALTGDWSPTRTATGLAWGLVVGGVLQFGVQAIAVR
                     RLAPELRPWIGRTIGRGDPSVADVRRRFGPAVLGRGVLQLSGYLDLILASLLATGAVA
                     GLLSAQMLYGLPVALFATSVAAASLPGMSRSSASELAATSLRARQRTAFYVAFSTVAF
                     LVLGESIVGALFGWGAFDGDDARAVSLVLGAYALGLPAVASSRIHQNSLYAVGDTVGP
                     ARIAAVRVGLAAVIGLTVMFPMDRITVHAGELMTVAGDGWFGPLSQGIRSGSLDPHLG
                     AVGLALGSAVAAWTELTLLARRTRRVLGAPTGPSSVMGPLAWPVATAVVVAMTARWAT
                     GGLPDVAAAPLSVMVAGLAYVTVASVTGVAEARSLITDIRGAQRRLGNR"
     gene            complement(2478..>3575)
                     /gene="proB"
                     /locus_tag="QGG16_02215"
     CDS             complement(2478..>3575)
                     /gene="proB"
                     /locus_tag="QGG16_02215"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004349 - glutamate 5-kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HJP24120.1"
                     /translation="TDTVVVKIGTSSITDDEGVIDRSSVGRLCDGVAALRDSGRHVVV
                     VTSGAIAAGLPELGLGGERRPRDAVTLQAVSAVGQGGLIRTYREELGRHGLIAGQVLL
                     APLDFFVRAQYLHARGTLTRLLELGVVPVVNENDAIADDEIRFGDNDRIAALVAHLVD
                     ASTLVLLTDTPGLLTADPHLDAGASLIEEIVEIDHELEGLAGTSGSVRGSGGMASKLA
                     AAKIASWSGVRTVIADAAREGVMLDACDGTSGVGTVVRPRAASLGARRLWIAFAVGSS
                     GRITVDAGARRALEERRVSLLPAGVVDVDGTYEAGSAVEVCDPSGSVFAKGIVRHDSS
                     ILRAHAGRRTGDLPDGMAHEAIHADDLVVLP"
BASE COUNT          554 a         1282 c         1137 g          602 t
ORIGIN      
        1 tgcctcgtcc acgtagacat ggcagttccc atctccgtcg atcacgtagg ggaccgtcgc
       61 gttgtccagg atcgatcgga tcagcgacgg gccaccccga ggaatgaggc agtccacgaa
      121 cccgcgctgc tgcatgaact cgacagcggc ctcccggctg ccgtcttcga cgaggaccaa
      181 cgcatcggca ggcaggccca catcgaccag cgccgaccga atactcacag caatggccct
      241 attggaggtc aacgccccgg acgagccccg gagaaaggcg acgttgccgg acttcagaca
      301 caagccgaag gcatcacttg tcacgttggg gcggttctcg tagatgatgg ccaccacgcc
      361 cagcggcacc cgcaccctgc tcacatgcaa cccgttgggt cgggtccatt cagacgtcac
      421 ctggccaacc gggtcttcca ggtcggccac ctgacgcagc ccggaggcca tgccagccac
      481 ccggacctcg tcgagtcgga gtcggtcgac catgccggca ggcatccctt cggcctcgcc
      541 gcgagctacg tcctcggcat tggcgtccaa caggtccgct acatcggcct gaagtcggtc
      601 ggcggcggcc agcagggcgg cgttcttgac ctccgtggtg gcaacggcca atgacggagc
      661 ggccgccttg gcacggcggg ctaggtcggc aacacccgat ccggacccga ccggtccgtc
      721 ggccccatag gtgacgacag attcgggttg cattcagtgg aggctagcca tcacctaccg
      781 tgcagtggat ggccgtggac cgaattgggc acccgaagga tgagggatca tcgtccgcgg
      841 tggccgccgg gatactgctg tccaaattgg ccgggctggc ccgcgagtcg ctgctccgct
      901 ccgtactggc cctcggtccg gcagcagatg ccttcgctgc ggccctgcgg ataccgaacc
      961 tgctccagaa cctgttggga gaggggtccc tgtccgcatc tttcattccc gtctacagcc
     1021 gcctcctggg cgagggccgg cgcgacgagg ccggcaaggt ggcggctgcg gtggccggac
     1081 tcctgactgc gttggccggc gggctagtcg tcgttgccat cgtggttgcc cgaccgctgg
     1141 cgaccctcct ggctcccgga ttcaagggag cccgcctcga cctcaccgtc gacctactcc
     1201 gcatcaccac cggcggcctc ggtcttctgg tgctctcggc gtggtgcctt ggaatcctga
     1261 acagccacgg ccggttcttc ctgccgtacg tggcccccgt gctctggaac gtggcccaga
     1321 tcgccgtgct ggtcgccgcc ctcaccggcg actggtcacc gacccggacc gccaccgggt
     1381 tggcgtgggg cctggtagtc ggcggggtcc tccagttcgg tgtacaggcc atcgccgtcc
     1441 gccggctcgc acccgaactg cggccctgga tcggacggac catcggacgt ggcgatccgt
     1501 cggtagccga cgtgcgacgg cgattcggac cggccgtact gggtcggggc gtcctccaac
     1561 tctccggcta tctagacctc atactggcat cgctgctggc cacaggagcg gtagccggcc
     1621 tgctgtcggc ccagatgctc tacggcctcc cggtggcact gttcgccacc agtgtggctg
     1681 ccgcgtcgct tcccgggatg tctcgctcat ctgcctccga gctggccgcc acctcgctac
     1741 gagcccgcca gcgcacagcc ttctacgtgg cattctcgac ggtggccttc ttggtactcg
     1801 gagagtccat cgtcggcgcg ttgttcggct ggggggcgtt tgacggtgac gacgcccggg
     1861 ccgtgtctct ggtgctgggc gcctacgccc ttggcctgcc ggccgtggcg tcctcacgga
     1921 tccaccagaa ctccctgtac gcggttggcg acaccgttgg cccggcccgt atcgccgcgg
     1981 tgcgcgtcgg cctagcggcc gtcatcggcc tcaccgtcat gtttcccatg gatcggatca
     2041 ccgtgcatgc cggcgaactg atgactgtcg ccggggacgg ctggttcggc cccctcagcc
     2101 aaggcatccg ctcggggtcg ctcgacccgc atctgggtgc ggtcggcctg gccctcggct
     2161 cagcggtagc cgcctggacc gagttgactc tgctggcccg tcgaacccgt cgagtactcg
     2221 gcgcgcctac tggtccgtcg tcggtgatgg gtccgctggc ctggccggta gccaccgccg
     2281 tggtcgtcgc catgactgcc cgctgggcca caggtggcct gcccgacgtg gcggcggcac
     2341 cactgagcgt gatggttgcc ggcctggcct acgtgaccgt cgcctcggtc acaggggtcg
     2401 ccgaggcccg cagcctcatc accgacatcc ggggcgccca acgtcgactc ggcaatcgct
     2461 aaccgtcggc ctctacgtca gggcaaaaca accaggtcgt cggcgtgaat ggcttcgtga
     2521 gccataccgt caggcaggtc gccggtccgt cggcccgcat gggcacgcag aatggatgag
     2581 tcgtggcgca cgatgccttt ggcgaacacc gaccctgacg gatcgcatac ctcgacggcc
     2641 gaaccggcct cgtaggtgcc gtccacgtcc accacaccgg ccgggagcaa cgacacccgc
     2701 cgctcctcga gcgcccgtcg ggcaccggcg tcaacggtga tccgacccga tgaaccgacg
     2761 gcgaaggcaa tccacagccg ccgggcaccg agacttgccg cccggggacg caccaccgtc
     2821 ccgacgcctg aagtgccgtc acaggcatca agcatcactc cctcgcgggc cgcgtcggca
     2881 ataacagtcc ggacgcccga ccagctagcg atcttggcgg ccgccagttt cgacgccatg
     2941 ccaccacttc cccgcactga cccgctcgtt ccagcaaggc cctccaactc gtggtcgatc
     3001 tccacaatct cctcgatgag cgatgcaccc gcatccaggt gggggtcagc ggtcagcagg
     3061 cctggcgtgt cggtcagcaa cacaagtgtc gacgcatcga caaggtgggc cactagcgcg
     3121 gcgatccggt cgttatctcc gaaccggatc tcgtcatcgg caatggcgtc gttctcgttc
     3181 actacgggca cgacacccag ttccagaagt cgggtgagtg tgccccgcgc atgcaggtac
     3241 tgggctcgca cgaagaagtc gagaggcgcc aacagcacct gtccggcaat caggccgtgt
     3301 cggcccaact cctcgcggta ggtgcggatc agaccgccct gaccgaccgc cgagacagcc
     3361 tggagggtca cagcgtcgcg gggccggcgt tcgccaccga gccccagttc gggcagtccc
     3421 gcagcgatcg ctcccgaggt caccacgacc acgtgcctcc ctgaatcacg caacgctgcc
     3481 actccgtcgc acagccgacc caccgaggag cggtcgatca cgccctcgtc gtcggtgatc
     3541 gacgaagttc cgatcttgac caccacggtg tcggt
//
LOCUS       DASCMR010000087         2014 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000471501, whole genome shotgun sequence.
ACCESSION   DASCMR010000087 DASCMR010000000
VERSION     DASCMR010000087.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2014)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2014)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2014
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000471501"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1499
                     /locus_tag="QGG16_02220"
     CDS             <1..1499
                     /locus_tag="QGG16_02220"
                     /inference="COORDINATES: protein motif:HMM:NF006052.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HJP24121.1"
                     /translation="ARFTGRVGVCFVTRGPGATNASIGVHTADQGSTPMVLFVGQVGR
                     PHRGLEAFQEVEYTSFFDDLAKWVVEVDNAADLPQVVTAAFTIATSGRPGPVVVALPE
                     DVLRDLTTAKPGPAVEVTEQDPTDGGVAAVQSVLAGAERPVVLAGGGGWTDVGRTSLA
                     AFTEAADLPVVVSFRRHDLFDNTNARYTGEAGVGMPPAVRETLETADVVLALNCRFGE
                     MTTAVYTLFGTDGRPNDQQIVHMHPSAYEFGKVVTPVATVQAGPNAMAAALLAGAVPA
                     GADRARWAGWRTGRRAAFEATLDCPSQLGDLDMGEVTAWLRERLPSDVVVTNGAGNFS
                     VWPNKFMLYGSEARLLAPQNGTMGYGLPAAVAAKIVDPDRIVICFAGDGDVQMNIQEL
                     GTALQADARPIVLVLDNSSWGTIRMHQELHHPGRVSATDLVNPDFVALAGAYGMHAER
                     VDRTDRFAPAFERALASDTGALLHLVIATEQLTPRLTVQGVRNSDGPE"
     gene            complement(1652..>2014)
                     /locus_tag="QGG16_02225"
     CDS             complement(1652..>2014)
                     /locus_tag="QGG16_02225"
                     /inference="COORDINATES: protein motif:HMM:NF025343.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator C-terminal
                     domain-containing protein"
                     /protein_id="HJP24122.1"
                     /translation="LVETGGTPRELLDIVINNFYPASGFSSSRLWIEGWAVALQSESF
                     RQTVMELDEAWVEVLAEALTDGVASGDFSCVNPRDSAWRLACLIEGLAIQQVAHGGVI
                     NDVETRRLVADAVEAEIG"
BASE COUNT          325 a          653 c          677 g          359 t
ORIGIN      
        1 gggcccgttt caccggaagg gtcggggtgt gtttcgtgac gcggggcccc ggggccacca
       61 acgcatccat cggtgtgcac accgccgacc aaggttcgac gccgatggtc ctattcgtcg
      121 gccaggtggg gcgtccccac cggggattgg aggcctttca ggaggtcgag tacacgtcgt
      181 tcttcgacga cctggccaag tgggtggtcg aggtggacaa cgccgcagac ctaccccagg
      241 tggtaaccgc ggcgttcacc attgccacca gcggccggcc ggggcccgtc gtggttgccc
      301 tgccggagga cgtcctgcgt gacctgacga cggccaaacc gggtccggcg gtagaggtca
      361 ccgagcagga ccccacagat ggtggggtgg ctgcggtgca gtccgttctg gctggcgccg
      421 agcgacctgt ggtcctcgcc gggggaggcg gatggaccga tgtcgggcgg acttcgctgg
      481 ccgccttcac cgaggccgct gatctacctg tggtcgtctc gttccggcga cacgacctgt
      541 tcgacaacac gaacgcccgg tatacgggtg aggcgggggt agggatgccg ccagccgtgc
      601 gggagaccct ggagaccgcc gacgtggtgc tggccctgaa ctgccggttc ggcgagatga
      661 cgactgccgt ctacacgctc ttcggaacgg atggtcgccc caacgaccag cagatcgtgc
      721 acatgcaccc gtcggcgtac gagtttggga aggtcgtgac accggtggcc accgttcagg
      781 caggcccgaa tgccatggcc gctgccctgc tagcgggagc cgttccggcg ggcgcggatc
      841 gtgcgcgctg ggcgggatgg cggaccggac gacgggccgc ctttgaggcc actctggact
      901 gtccatccca gctgggagac ctggacatgg gtgaggtcac ggcgtggttg cgcgaacgac
      961 ttccgtcaga cgtggtggtc accaacgggg ccggaaactt ctcggtctgg cccaacaagt
     1021 tcatgctcta cggttccgag gcccggctac tggcccccca gaacgggacc atgggctacg
     1081 gcctgcctgc tgccgtggcg gccaagattg tcgacccgga tcgcatcgtc atctgctttg
     1141 ctggcgatgg cgacgtgcag atgaacatcc aggaactggg caccgccctg caggccgacg
     1201 cccgccccat cgtcctggtg ctggacaact cgtcgtgggg gacgatccgc atgcaccagg
     1261 agttgcacca tccgggtcgt gtttcggcca ccgatctcgt gaaccccgac ttcgttgccc
     1321 tggccggtgc ctacggcatg catgccgagc gggtcgaccg gactgaccgg tttgcaccag
     1381 ccttcgagcg ggcactggcc tcagacaccg gtgccctcct gcacctggtg attgctaccg
     1441 agcagctaac cccccgcctt acggtccagg gcgtgcgcaa ctccgacgga ccggaatgat
     1501 cgtgtggcgg atctcgaacc ttctgtgtcg cttcactgcc gacgctccgg tgaccgacat
     1561 gctcgacgcc gtcggtggct ccgaagcgtt cgtccgctgg aggaccaggc ttgatgacct
     1621 gttaccaggc cggattctgt cgagcgaggg gctagccgat ctcggcctcg accgcgtcgg
     1681 caaccaagcg tcgcgtttcg acatcgttga tcaccccgcc gtgggctacc tgctggatgg
     1741 ccaacccctc aattaggcag gccagtcgcc atgctgagtc ccgggggttg acacaggaga
     1801 agtccccgga ggcgacaccg tctgtgaggg cttcagcgag aacctcgacc caggcctcgt
     1861 ccaactccat gaccgtctgc cggaaggact cggactgcag cgcgaccgcc cagccctcga
     1921 tccatagtcg cgagctagaa aagccgctgg ctgggtagaa attgttgatc actatgtcga
     1981 ggagttctct tggtgttccg ccggtttcca ccag
//
LOCUS       DASCMR010000088         8765 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000471719, whole genome shotgun sequence.
ACCESSION   DASCMR010000088 DASCMR010000000
VERSION     DASCMR010000088.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 8765)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8765)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8765
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000471719"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..297
                     /locus_tag="QGG16_02230"
     CDS             <1..297
                     /locus_tag="QGG16_02230"
                     /inference="COORDINATES: protein motif:HMM:NF012609.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP-utilizing enzyme"
                     /protein_id="HJP24123.1"
                     /translation="MDRETGAEGVVAVIRDAGATFLGPIFDELTGVVCTGGTIRSHIG
                     IISREYRIPGVIAFEFDTVGVSEGEPEGAAELANDTVVELDGAGVDGVVRTATP"
     gene            294..1451
                     /locus_tag="QGG16_02235"
     CDS             294..1451
                     /locus_tag="QGG16_02235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24124.1"
                     /translation="MSEPEIDTSVRDRVNGRIRAINPVTQRLVAERTAYSSQLIPVTQ
                     YVTVSCIEAFLRYPSAVEVITAARAPEEIGAMARRPGCQADSVFLWGVANFFLIGRNV
                     MNMVEPTIDAGSAGLARADMVLDFWARTSQAYRGGAHLHAAEVGDRLDVMDVGTVKAL
                     TAGTTPVDHERRDRIRRANATIINHLFLLYFDTRVGHGDTGPYPLGDGRTLVVRDYFR
                     LGRSDFAWSGVADAVPFSNLTAALVLDEDVDVSITDYGTTVSSPEDYLDHLVGFGLWT
                     TDGVGPDGGSDGSLRPLTDDDLDRVAAACRAAQKQHYRDIVAMERDQRIACGAYVYFT
                     FLRPFAELAGVADEIDWTCPRDTPDDLYPLVTADGDPPDSDPDTDPFPPYE"
     gene            complement(1477..2436)
                     /locus_tag="QGG16_02240"
     CDS             complement(1477..2436)
                     /locus_tag="QGG16_02240"
                     /inference="COORDINATES: protein motif:HMM:NF015951.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF368 domain-containing protein"
                     /protein_id="HJP24125.1"
                     /translation="MTGQDSGAGHRESTGQQRSPGLREAMGMVGRGAAMGAADVVPGV
                     SGGTIALLTGIYDRLIGSLGDGARGLGRLVRGDLRGAVLQLRRLNWTFIIPLLVGLLG
                     AVALLAGVVEGALIDHPEPMAGLFLGLVTASVMVAQREVAWTVWRLVVTGIVGLTLFV
                     ALGWQGPPVTDPSALALFASGAVAICAMVLPGISGSFLLLMLGMYATVIDIVDERMLA
                     DAAIFGAGAVVGLSCFSTVLSRLLDERADDVLAVMVGLLIGSGRVLWPWPHGVGVVSR
                     HADDAVGGAGLGWPDTAGGLAVPVLLAGLAVVVVLGVERLARR"
     gene            complement(2433..2870)
                     /locus_tag="QGG16_02245"
     CDS             complement(2433..2870)
                     /locus_tag="QGG16_02245"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HJP24126.1"
                     /translation="MSHRHPVKVRFYELDPYGHLNHSVYVQLFETGRVELLDEAGLGL
                     QGLEGEGYRFVVTQIATRFLASAMGGDTLIVETEVLEIRRASSRWGQRILRADLETGT
                     EHLLATQEVVAAVTGSNGRPTRLPATMADRLSPYLVADTTPTT"
     gene            2920..3798
                     /locus_tag="QGG16_02250"
     CDS             2920..3798
                     /locus_tag="QGG16_02250"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJP24127.1"
                     /translation="MTEPTSFAVEIFSECFESTGLGAGAVDRDGETEALPILLVAGAD
                     AHCTSWTPALIEPLTALGHRVVRYDHRDSGLSTKVPTNVGYTLDDLANDALTVMDAHG
                     IDRAHVIGRSMGGMVGQLLALDHADRVATLTLVCSTPGLGDDRLPMAADWLVDRMTER
                     LFAEPPETGAARAAWIVEQGEWFAGSRHPVPTTDRLQIAVAEVDRCWYPESGHGVAVS
                     ASPSRLDRLDGIERPTLVVHGTADPVFSVEHALALADGIRGAELWLVEELGHELPDGL
                     VPELLSRLRIHLNRAS"
     gene            complement(4246..4455)
                     /locus_tag="QGG16_02255"
     CDS             complement(4246..4455)
                     /locus_tag="QGG16_02255"
                     /inference="COORDINATES: protein motif:HMM:NF019351.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HJP24128.1"
                     /translation="MGSCPPPCKVGFPPLDHPYLADTINVAPDERYPVLVRSDELGVW
                     VWHCQILSHVDWNDGMFGMVTGVIF"
     gene            complement(4469..5266)
                     /locus_tag="QGG16_02260"
     CDS             complement(4469..5266)
                     /locus_tag="QGG16_02260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HJP24129.1"
                     /translation="MSSGPVSSEHGTIINVTLKVWRQDGPDDAGRFDVHQQAISTDAS
                     FLEMLDQLNEQLNDAGNEPVAFESDCREGICGTCGVMINGRAHGPQKATATCQLHMRE
                     FRDGDEIVIEPFRAAGFPVLRDLAVDRSPLDRIIEAGGYISVNTGAASDANLTPVPKV
                     AADMAFDAAACIGCGACVAACPNSAAQLFTSAKIGHLGLLPQGQAERWSRTEAMVETM
                     EEFFGSCTNHGECSEACPKEISLDFIAFMNRDYMKAKVKNRALAGQR"
     gene            complement(5299..7254)
                     /locus_tag="QGG16_02265"
     CDS             complement(5299..7254)
                     /locus_tag="QGG16_02265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase/succinate dehydrogenase
                     flavoprotein subunit"
                     /protein_id="HJP24130.1"
                     /translation="MSNATPPDQVTTSPALNSKIPTGDVADMWENHKFSMNLVNPNNK
                     RKFDVIVVGTGLAGASAAASLGELGYRVKAFTFHDSPRRAHSIAAQGGINAAKNYPND
                     GDSVHRLFYDTVKGGDYRSREANVHRLAEVSVNIIDQATAQGVPFARDYGGLLDNRSF
                     GGAQVSRTFYARGQTGQQLLIGAYSALMRQVAAGTVELHSRAELLDVVKKDGRACGIV
                     TRDLVSGEVTPHSAHAVVLATGGYGNVYFLSTNAMMCNVTAAWRAHKKGAFFANPCYT
                     QIHPTCIPVSDDFQSKLTLMSESLRNDGRIWVPDANDDARMAAEIPEAERDYYLERKY
                     PAFGNLVPRDVASRNAKTVCDEGRGVGPLKNGVFLDFQAAIARDGVDAISEKYGNLFD
                     MYHRITGENPYEQPMRIYPAIHYTMGGLWVDYHLMTSVPGLYSIGESNFSDHGANRLG
                     ASALMQGLADGYFVLPYTIGDDLAGLLGQSAVPTNDPVFTEAIAGVTDEQNRWLSVNG
                     TKSVDYYHRELGRITWEHIGMGRTKAGLIQALSEIPALRDEFHSNVRVLGSAETLNQS
                     LEKAGRVADFFDLAELMARDALEREESCGGHFREEHQTAEGEAQRDDENFAHVAAWEW
                     NGEGTAQTRHREELTFENVALAQRSYK"
     gene            complement(7278..8117)
                     /locus_tag="QGG16_02270"
     CDS             complement(7278..8117)
                     /locus_tag="QGG16_02270"
                     /inference="COORDINATES: protein motif:HMM:TIGR02046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase cytochrome b subunit"
                     /protein_id="HJP24131.1"
                     /translation="MAQTTEQRYRVTPVRPRGRQWPFPLNLYQSAVGRKWVMALTGIG
                     LIGFVLVHMIGNLHLYEGPARMHEYAESLRTLGGGLVPKGTVLWLMRAGLLTMFVLHL
                     HSAITLSRMSGNASEKASMISGAKKYEGGRDHIAATFASRTMRWTGPIIALFILYHLA
                     DLTWGWWLGDDFVAGDPYHNVATSLGALPVAILYVVANMALAWHIYHGAWSMFQSLGV
                     NNPRYNHLRRTLATSLAGLILVGNLSFPILTQAGLVDDDGRQCPADATYVLECLADQA
                     SDH"
     gene            complement(8287..>8765)
                     /locus_tag="QGG16_02275"
     CDS             complement(8287..>8765)
                     /locus_tag="QGG16_02275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24132.1"
                     /translation="IQIEALRRRKYQPTGGFTLDRLLDGAPAISGSLVDHLRNPKPAY
                     ATVTAACAPTIVVADPPLESIAPRSTMTVQVVVVHDGRLPVERCRVNARLRIGSEGPV
                     IERSWGGALEADSVTLIGTLEVSLGDATGAVSLELDLTVDGTSLAANRYEGRIGAD"
BASE COUNT         1450 a         2786 c         2969 g         1560 t
ORIGIN      
        1 atggaccgtg agacgggggc ggagggcgtg gtggccgtga tccgcgatgc tggggccacc
       61 ttcctgggcc ccatcttcga cgagttgacc ggcgtggtgt gcacgggcgg gaccatccgg
      121 agccatatcg ggatcatcag tcgggaatac cggatccccg gggtcatcgc cttcgagttc
      181 gacaccgtgg gtgtctccga gggagaaccc gagggcgcgg ctgagctggc gaacgacacc
      241 gtggtggagt tggacggggc gggcgtcgac ggtgtggtcc ggactgcgac cccgtgagcg
      301 aacccgagat cgacacgtct gtgcgtgacc gggtcaacgg tcggatccgg gccatcaatc
      361 cggtcaccca gcgcctggtg gccgagcgca cggcgtattc atcccagctc attccggtca
      421 cccagtatgt aacggtctcg tgtatcgagg ccttcctgcg gtatccgtcg gctgtagagg
      481 tcatcaccgc tgcccgcgcc cccgaggaga ttggggctat ggcacgccgg cccggctgcc
      541 aggccgactc ggtgttcctg tggggagttg ccaacttctt cctcatcggc cgcaacgtca
      601 tgaacatggt cgagccgacg atcgacgccg gctcggccgg tctggcccga gccgacatgg
      661 tgctggattt ttgggcccgg acctcgcagg cttaccgcgg tggcgcccac ctccacgcgg
      721 cggaggtggg cgaccgtctg gacgtgatgg acgtcgggac ggtcaaggcc ctgaccgccg
      781 ggacgacgcc ggtcgatcac gagcgtcggg accggatccg ccgggccaac gccaccatta
      841 tcaaccacct gttcctcctc tacttcgaca cccgggtggg gcacggcgac accgggccgt
      901 accccctggg tgacggacga acgctggtag tacgcgacta cttccgactg ggacgcagcg
      961 acttcgcgtg gtccggcgtg gccgacgccg ttccgttctc caacctgacg gctgccctcg
     1021 tgctggacga agacgtggac gtgtcgatta ccgactatgg caccacggtg tcgtcgccgg
     1081 aggactatct ggaccatctg gtgggcttcg gcctgtggac tactgacggg gtggggcctg
     1141 atgggggatc ggatggatcc ctccgaccgc tgaccgatga cgatctcgac cgggtggcag
     1201 cggcttgccg ggcggctcag aagcagcact accgcgacat cgtggccatg gagcgggacc
     1261 agcggatcgc ctgtggggcc tacgtctact tcacctttct acgacccttc gccgagttgg
     1321 ccggggtggc cgacgagatc gactggacgt gtccgcgcga cacgcccgac gatctctacc
     1381 cgttggtaac cgccgacggt gatccgccgg acagtgatcc cgacaccgat cccttccccc
     1441 cctacgagtg aacccggtgt ccggccaggg gttacttcac cgacgagcca gacgttccac
     1501 gcccagcacc acgaccacgg ccagaccggc cagcaggact ggtaccgcca gtccaccagc
     1561 cgtatcgggc caacccagcc cggcacctcc gacagcgtca tcggcgtggc gactcacgac
     1621 ccccacaccg tggggccatg gccataacac ccggccagag ccgatgagca ggcccaccat
     1681 gacggccagc acgtcgtctg cccgctcgtc gagcagacgc gacagcaccg tggagaagca
     1741 ggagaggcca accactgctc cggctccgaa gatcgccgcg tcggccagca tccgctcgtc
     1801 gacgatgtca atcacagtgg cgtacatgcc cagcatgagc aggaggaacg atccggatat
     1861 tccgggcaag accatggcgc agatggccac agcgcccgaa gcaaacaggg cgagcgccga
     1921 tggatcggtc accggggggc cctgccatcc gagggccacg aacagggtga ggccgacgat
     1981 ccccgtgacg actaggcgcc agacggtcca tgccacctct cgctgggcga ccatcaccga
     2041 ggcggtcacc agcccgagga acaggccggc catgggctcc gggtgatcga tgagggcacc
     2101 ctcgaccact ccggcgagca gcgccacggc acccagcagg ccgaccagca gcgggatgat
     2161 gaacgtccag ttgaggcggc gcagttggag gacggccccc cgtaggtcgc ctcggacgag
     2221 gcggccgagt cctcgggcgc catctccgag gctgccgata aggcggtcgt agatacctgt
     2281 gagcagggcg atggtgccgc ccgagacccc gggcaccacg tcagctgctc ccatggccgc
     2341 acccctcccg accatcccca tcgcctcccg caacccggga gagcgttgct ggccggtgct
     2401 ctcgcggtgg ccggccccgc tgtcctggcc ggtcatgtcg taggcgtcgt gtcggcgacc
     2461 agatacggac tgaggcggtc agccatggtc gctggtagac gggtgggtcg accgttgctc
     2521 ccagtgaccg cggcgaccac ctcctgggtg gctagcaggt gttcggtccc ggtttcgaga
     2581 tcagcccgca gaatccgctg cccccatcgt gacgaggcac gtcggatctc cagcacctcg
     2641 gtctccacga tcagagtgtc accgcccatc gcagaggcca ggaacctcgt ggcgatctgg
     2701 gtaaccacaa agcggtagcc ctcgccttct aagccttgga ggcccagacc ggcctcgtcc
     2761 agcagctcaa cccgtccggt ttcgaacaac tgcacgtaga cgctgtggtt caggtggccg
     2821 taggggtcga gttcgtagaa acgaaccttc acagggtggc ggtgggacac ggcgacgacg
     2881 ctagccccgc ccccggaggt caccggtacc ctcgacgtcg tgactgaacc gacgtcgttt
     2941 gccgtcgaga ttttctcgga atgcttcgag tcgacgggtc tcggtgctgg tgccgtcgac
     3001 cgtgatgggg agacggaagc cctaccgatc ctgctggtgg cgggagctga tgcccactgc
     3061 accagttgga cgccggcgct catcgagccc ctgacggccc tcggccaccg ggtggtccgc
     3121 tacgaccatc gtgacagcgg cctgtcaacc aaggtcccga cgaatgtcgg ctacaccctg
     3181 gacgacctgg ccaatgatgc actgaccgtg atggatgccc acgggattga ccgggcccac
     3241 gtgatcggtc gatccatggg tggcatggtc ggccagttgc tggcgctaga ccatgccgac
     3301 cgggtggcca ccctgaccct ggtctgttcg accccgggcc tgggtgacga tcggcttccg
     3361 atggccgccg actggttggt ggatcggatg accgagaggt tgttcgccga gcctcccgag
     3421 accggagcgg cccgggcggc gtggattgtg gagcagggcg agtggttcgc cgggtctcgt
     3481 cacccggtgc caaccaccga tcggctccag atagcggtgg ccgaggtgga tcgctgctgg
     3541 tacccggagt ccggccacgg tgtggccgtc agtgcttcgc cgtcgcgtct ggatcgtctg
     3601 gatgggatcg agcgacccac gttggtcgtg cacggcacgg ccgatccggt gttcagcgtc
     3661 gagcatgctc tggcgctcgc cgacgggatc cggggtgccg agctctggct ggtcgaggaa
     3721 ctcggccacg agctacctga cggcttggtg cccgaactgt tgtcgcgtct ccggatacat
     3781 ctgaaccggg ctagttgagc ctgaacgcga aggcgacgcc cttccggcgg gtggaaggac
     3841 gccgccatcg ccgggcccgg tttcgagccg tcgcgcgtca acgttctccg tggcccagta
     3901 gggctctggt cgagagagcg tgaggggacc aactcgttcg gcgggcctcg aactcacccg
     3961 ttgggcggtg atcggcaggg cgggcccgtc gatgccccga acggggcgat cgttggggtc
     4021 gggatcgacg agggggaggg ttcaggttgc atgtgatctc ctccccttca ctcgtggttg
     4081 ctgccgtgtc cgtccacctc cagatccgcc gtatgcccgg tgccccggtc ggtggagcgt
     4141 cgggatggtc gcggaatcgg gtggcacgtc aaccgtcgcg ccggagcatg cttctgtcaa
     4201 ccggatgcat gatcgattct ggagatgggt tgtaacccag gcctcctaga agatcacccc
     4261 ggtgaccatg ccgaacatcc cgtcattcca atccacatgg ctgaggattt ggcagtgcca
     4321 tacccagaca ccgagttcgt cggaacggac cagcaccgga tagcgctcgt cgggcgccac
     4381 gttgatggtg tcggccaggt acggatggtc gagggggggg aagccgacct tgcagggagg
     4441 cggacatgat ccgatccccg gtgccgggtc agcgttggcc ggccagcgct cggttcttga
     4501 ccttggcctt catgtagtca cggttcatga aggcaatgaa gtccagcgag atctccttcg
     4561 ggcacgcctc ggagcactca ccgtggttgg tgcacgagcc gaagaactcc tccatggttt
     4621 cgaccatggc ctcggtccga ctccaccgct cggcctggcc ttggggtagg agtccgaggt
     4681 ggccgatctt ggccgaggta aacaactggg cggccgagtt cgggcacgcc gccacgcagg
     4741 ccccacaacc gatgcatgcc gcggcgtcga acgccatgtc agcggccacc ttgggcacgg
     4801 gggtgaggtt ggcgtcagaa gccgcccccg tgttgaccga gatgtagccg ccggcctcaa
     4861 tgatgcggtc cagcggtgaa cggtcgaccg ccagatcgcg cagcaccggg aagccggccg
     4921 cccggaacgg ttcgatgacg atctcgtcgc cgtcgcgaaa ctcccgcatg tgcaactggc
     4981 aggtggccgt ggctttctgc ggaccatgcg cccgcccgtt gatcatcacg ccacacgtgc
     5041 cgcagatgcc ttcacggcag tcgctctcga aggccactgg ctcgttgccg gcatcgttga
     5101 gctgttcgtt gagctggtcg agcatctcga ggaaggaggc atcggtactg atggcctgtt
     5161 ggtgcacgtc gaagcgaccg gcgtcgtctg gcccgtcctg ccgccacacc ttgagggtga
     5221 cgttgataat ggtgccgtgc tctgaagaaa ctggccctga agacatgttg gtttcccctg
     5281 ttcctctctg gcccgggcct acttgtagga gcgctgtgcc agcgccacgt tctcgaaggt
     5341 cagttcttcg cggtggcggg tctgagccgt gccctcgccg ttccactccc aggccgctac
     5401 gtgggcgaag ttttcgtcgt cgcgttgggc ctcaccctcg gccgtctggt gttcttcgcg
     5461 gaagtggccg ccgcatgact cctcccgctc cagggcgtct cgagccatga gttcagctag
     5521 gtcgaagaag tcggccaccc ggccggcctt ctcgagggac tggttgagag tctctgcgct
     5581 gcccagtacc cgtacgttgg agtggaactc gtcgcgcagg gccggtatct ctgagagggc
     5641 ctggatgagg ccggctttgg tgcgacccat gccgatgtgt tcccaggtga tgcgaccgag
     5701 ttctcggtgg tagtaatcga ccgacttcgt cccgttgacg gacagccagc gattctgctc
     5761 atcggtcaca ccggcgatcg cctcggtgaa cacagggtcg ttggtaggta ccgcagactg
     5821 gccgagtagg ccagccagat cgtcaccgat ggtgtacggc agcacgaagt agccgtcagc
     5881 caggccctgc atgagggcgc tcgctccgag gcggttggcg ccgtggtccg agaagttgga
     5941 ctcaccgatc gagtacaggc caggcaccga ggtcatcagg tggtagtcca cccacaggcc
     6001 acccatcgtg tagtggatgg ccgggtagat ccgcatcggc tgctcgtatg ggttctcacc
     6061 ggtaatccgg tggtacatgt cgaacaggtt cccgtacttc tcggagatgg catccacgcc
     6121 gtcacgggcg atggctgcct ggaagtcaag gaatacgccg ttcttcaatg ggcctacgcc
     6181 ccggccctca tcacacacag tcttggcatt acgcgacgcc acgtcacgtg gtaccaggtt
     6241 gccaaaggct gggtacttgc gttccaggta gtagtcgcgt tcagcctcgg ggatctcggc
     6301 ggccatgcgt gcgtcgtcgt ttgcatcggg tacccagatg cgaccgtcgt tgcgcagcga
     6361 ttcggacatc agggtgagct tggactggaa gtcgtcgctg accggtatgc aggttgggtg
     6421 gatctgtgtg tagcaggggt tggcgaagaa ggcgcccttc ttgtgggccc gccaggccgc
     6481 cgtgacattg cacatcatcg cgttggtgga cagaaagtag acgttgccgt agcccccggt
     6541 agccagtacc acggcgtgcg ccgagtgggg cgtgacctcg ccggagacga ggtcacgggt
     6601 gacgatgccg cacgcccgac catccttctt gacgacgtcg agtagttcgg cgcggctgtg
     6661 tagttcgacg gtcccggcgg ccacctggcg catcagggcc gagtaggcgc cgatgagtag
     6721 ttgctgcccg gtctggccac gggcgtagaa ggtccgagac acctgggcgc caccgaacga
     6781 gcggttgtcg agcaggccgc cgtagtcgcg ggcgaacggt acgccctggg cggtggcctg
     6841 gtcgatgata ttgaccgaga cctcggccag ccggtggaca ttggcctccc gggagcggta
     6901 gtcgccacct ttgacggtgt catagaacag tcggtggacc gagtcgccgt cgtttgggta
     6961 gttcttcgcc gcgttgatgc cgccctgtgc ggcgatcgag tgggcacgtc gagggctgtc
     7021 gtggaaggta aaggccttca cccggtaccc caactcgccg agcgaggcag ctgccgacgc
     7081 accggccaaa ccagtaccga cgacgatcac atcgaacttg cgcttgttgt tggggttgac
     7141 cagattcatt gagaacttgt ggttctccca catgtcggcc acatcgccgg tagggatctt
     7201 gctgttcagg gccgggctcg tcgtgacctg gtcaggcggg gttgcgttgc tcatggtgtc
     7261 tcctgccgtt ccgtcgccta gtggtccgat gcctggtcgg ccagacattc gagaacgtat
     7321 gtggcgtcgg ccggacactg gcgcccgtca tcgtcgacga ggccggcttg ggtgaggatc
     7381 ggaaagctca ggtttccgac gaggatcagc ccggccaagc tggtggccaa cgtgcgtcgc
     7441 aggtggttgt aacgggggtt attcacgccg aggctctgga acatcgacca ggccccgtgg
     7501 tagatgtgcc acgccaacgc catgttggcc accacgtaga ggatggccac cggcagggcc
     7561 ccaagtgacg tcgccacatt gtggtacgga tcgccggcca caaagtcgtc gcccagccac
     7621 cagccccagg tcagatcggc caggtggtag aggatgaaca gggcgatgat cgggccggtc
     7681 cagcgcatgg tgcggctggc gaaggtggcg gcaatgtggt cccgcccacc ctcgtacttc
     7741 ttggctccgc tgatcatgct ggccttctcg ctggcgttgc cgctcatccg actaagggtg
     7801 atggccgagt gcaagtgcag gacgaacatg gtgagcaggc ccgcccgcat cagccacagg
     7861 acagtgccct tgggcaccag gcccccgccc agagtccgta gcgactcggc gtactcgtgc
     7921 atccgggctg ggccctcata caggtggagg ttgccgatca tgtggaccag cacgaacccg
     7981 atgaggccga ttccggtgag ggccatgacc cacttgcgac ccaccgcgct ctggtaaagg
     8041 ttcagaggga agggccactg gcggccccgc ggtcggaccg gcgttacgcg gtagcgctgc
     8101 tcagtggttt gggccatggt tccctcctcg tgcgatggcc ccggtgcgac ggggtgaggc
     8161 gttcgcagag gtgagagtag cgcgctgggg atagccacct ctgagccgat cgccacttca
     8221 gatgcccaat cgccaacagg ggtccgggtc gcctcgacct ccgactcaat cacctccgtc
     8281 tccggctcag tcagcgccga tccgaccctc gtagcggttg gcggcgaggc ttgttccgtc
     8341 gacggtcagg tctaactcga gggagacggc tccggtagcg tcaccgaggg acacctcgag
     8401 ggttccgatc agggtcaccg agtcggcttc gagggcgcca ccccacgatc gttcgatgac
     8461 cggaccctcg gagccgatcc ggagccgggc gttcacccga cagcgttcga cagggagccg
     8521 accgtcatgg acgaccacca cctggactgt catggtggaa cggggggcaa tggactccaa
     8581 cggtggatcg gccaccacga tggtcggagc acatgccgcg gtcaccgtgg cgtaggccgg
     8641 cttggggttc cgaaggtggt cgaccagcga tccggagatg gccggtgctc cgtcgaggag
     8701 tcggtccagc gtgaatcctc cggtgggctg atacttacgg cggcgcaggg cctcgatctg
     8761 aatcc
//
LOCUS       DASCMR010000089         8284 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000473902, whole genome shotgun sequence.
ACCESSION   DASCMR010000089 DASCMR010000000
VERSION     DASCMR010000089.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 8284)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8284)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8284
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000473902"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..521)
                     /locus_tag="QGG16_02280"
     CDS             complement(<1..521)
                     /locus_tag="QGG16_02280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJP24133.1"
                     /translation="MTETLSAYPPEESWDHVESLDPTAWPTKVRRAHRLVPTTCFNCE
                     ANCGLLAWVDKDTGKITKFEGNPVHPASRGRNCAKGPATINQAEDPERILHPMKRVGD
                     RGEGLWEQISWDQALDEIGDRIGTALREDRHDEIMYHVGRMGDDSYMERVLHSWGIDG
                     HNSHTNICSSGARV"
     gene            complement(555..2102)
                     /locus_tag="QGG16_02285"
     CDS             complement(555..2102)
                     /locus_tag="QGG16_02285"
                     /inference="COORDINATES: protein motif:HMM:NF015851.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HJP24134.1"
                     /translation="MTRLGFVLDSSSCIGCHACTVACKSEHNVPLGVNRTWLKYVETG
                     THPDTDRLFSVMRCNQCEDAPCMTICPTSALYRADNGVVDFQDDDCIGCKACMNACPY
                     DAIYLNPETNTAHKCNFCNHRIEDGLEPSCVIVCPTQAIRVGDLDDPGSEISRLHADG
                     GLVRSPEQNTRPKVIYRGATASSLDPLASAISDDGLIWADTTPGHSTPTPVALTVAPT
                     RDDGEPMARTAYTTQHPPVWGSMVSGYLVTKAIAAGVMLVASLLVVLGHGDERSVVSV
                     VPPLVAGVFLVLTGVLLVGDLKQPKRFWYLLMKGNWTSWLVKGAWVLGAFAVCLAAWW
                     VAGLADAGGVLPVLVVPTVLLALGTAGYTAFLFGQCEGRDLWQEPLLLPILLAQAVMA
                     GGASWSLFDQFLDVPSHESVKWLFLAGLTANAALVGAEFRGGHSRHVTMALADLRHGD
                     QKKRWREWLFCTVFAMLFLSLDILLGNFVFDWTGPVQPIVPLAALYGLFAYEDAYVRA
                     GQSVPLS"
     gene            complement(2099..2674)
                     /locus_tag="QGG16_02290"
     CDS             complement(2099..2674)
                     /locus_tag="QGG16_02290"
                     /inference="COORDINATES: protein motif:HMM:NF024701.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WHG domain-containing protein"
                     /protein_id="HJP24135.1"
                     /translation="MSRRTLDTDQVVDSAAALADSEGLDAVTLTRVALLLGVRQPALY
                     RHIDSYDALVRALGLRGREILASRLGEAAVGLAGDDAVRAMGRAWRAMVGDHPGLYAA
                     TDRYPCAGDAELEEAVERVVAVLGQALVAYGLADVDRVHAARSMRSALHGFAHLESGD
                     GHPHPVDLDESFDRLVDLLCAGIHQMVPGAS"
     gene            complement(2759..3556)
                     /locus_tag="QGG16_02295"
     CDS             complement(2759..3556)
                     /locus_tag="QGG16_02295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24136.1"
                     /translation="MSLSAVFLVLASTVLHAGWNARLHRGGDPEVVIALAYLFVGIVL
                     LPAAVVDPPGEVMGWVLASSLAQGLYMGLLGSAYRAGSLSVAYPIARGTAPLLVGLGG
                     WLLLDETPSAFTAMGLVVLVVGLLSLAGVGTQRQELRAVVLAAATGLCTVGYSLIDAR
                     SVDLTGAMGYMSVIMIISSVGVLTVRRPGMDRVRPVLGHAAVVGVGQGGAYGLILMAF
                     QQAQAGQVTGLRQVSVVLGVLIARESLGPRAMWGAVLVTVGAGLVVW"
     gene            complement(3589..4530)
                     /locus_tag="QGG16_02300"
     CDS             complement(3589..4530)
                     /locus_tag="QGG16_02300"
                     /inference="COORDINATES: protein motif:HMM:NF013665.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase"
                     /protein_id="HJP24137.1"
                     /translation="MSSPGSSNVPAVVSGWYELAATDPARVVLADLGDPRADFAAIQL
                     VDEELVQPVHPIVDRSDGQQAEAIARAEDAGLDVSDPIVAATVLVRSGAADAAVAGAT
                     RSTADVLRAGLKVLGVAPGVEMVSSCFLMVLADGRLVAYGDCGVVPDPDVSQLATIAS
                     STADTWTGLAGPVSGGGLPRVAMLSFSTKGSAEHPRVDKVRAATALVADRRPDLTVDG
                     ELQFDAAIVPSVAAVKAPGSPVAGAADVFVFPDLDSGNIAYKVTERLGGARAYGPLLQ
                     GLDGILHDLSRGCSAADIVDVAVIAGLQARSSGAIGT"
     gene            complement(4554..5417)
                     /locus_tag="QGG16_02305"
     CDS             complement(4554..5417)
                     /locus_tag="QGG16_02305"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HJP24138.1"
                     /translation="MSIPSRLAGHAGAVRKGASGRKTVTFGDASEVKGSPLWSVASLL
                     FVAFIWWWIKSGTEPMINDRTFPSMRQTWDAFVELATDGYRRVSLWDHTWASLWRVLK
                     GLVYGVIVGVPVGFAMGLSNRLRGIFDPIVELLRPVPPLALLPLFIVWFGIGEGSKVN
                     LLFFAAVWIMVIAARAGVLGVRGSKVHAAYSLGANKWQILRYVILPNALPDIFTGMRV
                     ALGVCWGTLVAAELTGTTTGLGAMIFAASKFFRMDVVVVSIIVIGVIGVAMDLAMRFL
                     ERRLIPWRGKG"
     gene            complement(5414..6220)
                     /locus_tag="QGG16_02310"
     CDS             complement(5414..6220)
                     /locus_tag="QGG16_02310"
                     /EC_number="7.6.2.7"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJP24139.1"
                     /translation="MKNLSVEGLGMVYELPKGGSVQALHDVSFDLEAGRLLTLLGPSG
                     CGKTTLLNIIAGFLAPTSGSVTLGGDPIRGPGQERGMVFQQGALFEWQSVAQNVAFGP
                     RMNRKKRSETNELVQDLLATVGLQGFGDKAVYELSGGMQQRVALARCLANDPEIILMD
                     EPLGALDALTREKMQSLILKLWQETGKTIVLVTHSVEEALYLGDRLFVMAPRPGRVER
                     EYELPFAAKGLHVDPREMKASPEFIEKREELLSLIWEMEEQIMGHDGGVS"
     gene            complement(6272..7642)
                     /locus_tag="QGG16_02315"
     CDS             complement(6272..7642)
                     /locus_tag="QGG16_02315"
                     /inference="COORDINATES: protein motif:HMM:NF012428.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HJP24140.1"
                     /translation="MSTHRELAQKHLVPHFTPKAAWQNDALPIIERAEGCYLYDADGV
                     EYLDGLAGLFCVNIGHGRPDLSNAAAKQMNKLAYSTNWGFAHPPAIEAAEMIAGFAPG
                     DLSETFFVSSGSEAVESAIKFARNYHLARGDEARYKVISRNWAYHGTTLGALSVTGIP
                     KFRDPYLPMLWDGTRHVSNTRECTSPVGTPAAELSCVQAIEEMILAEGPETISMVIGE
                     PVQNGGGALVPPNGYWQELRRICDRYGVLLVADEVICSFGRFGHWFASERLDVVPDMI
                     TFAKGVTSAYQPLGGVVIRGQLVEELFDSPMGSYVHGSTFGGHPVATAVAVANMTAMR
                     DEGVLQHVLDNEGYFTEQLQAMGGAHRSVREVRGTGYFYAVDLCADSADDRDLSPTQE
                     TGLRGGALGGFVREERMTVRPDDRGYTGLTISPPLVADRAIIDDLVARIDRVIDRVDA
                     WLGDND"
     gene            7819..>8284
                     /locus_tag="QGG16_02320"
     CDS             7819..>8284
                     /locus_tag="QGG16_02320"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJP24141.1"
                     /translation="MAKQIPERAQVVIIGGGIVGASIAYHLTELGWTDVVLLERNTLT
                     SGTTWHAAGLVGCLRATQNMTRLAAYSAELYESLERDMGHATGFKKVGSLSVADNPER
                     MEELVRGAGMANTFDVEVEVISADDLCARYPLLNPDGIVGGVWLPGDGQASPV"
BASE COUNT         1563 a         2827 c         2626 g         1268 t
ORIGIN      
        1 acccgggcac cgctggaaca gatgttggtg tggctgttgt ggccatcgat gccccagctg
       61 tggaggaccc gctccatgta gctgtcgtcg cccatccgac caacgtggta catgatctcg
      121 tcgtggcggt cctcgcgtaa tgccgtgccg atccgatcac cgatctcgtc gagcgcctga
      181 tcccacgaga tctgttccca gaggccttcg ccccgatcgc ccacacgctt catgggatgc
      241 aggatccgct cggggtcctc ggcctggttg atggtggccg ggcccttggc gcagttgcgg
      301 ccgcggctcg ccggatgcac ggggtttccc tcgaatttgg tgatctttcc ggtgtccttg
      361 tccacccatg ccagcaatcc gcagttggcc tcacagttga agcaggtggt cggcaccaga
      421 cgatgggcgc gacgcacctt ggtgggccag gcggtcgggt cgagggactc gacgtggtcc
      481 cacgactctt cgggcgggta ggcggacagg gtctcggtca tctcaggctc cggtgaggtc
      541 aagggaggcg gtagctacga gagggggacc gactggccgg cccggacgta ggcgtcctcg
      601 taggcgaaca ggccgtacag cgcagccagg ggaacaatgg gctggactgg gccggtccag
      661 tcgaacacga aattgcccag caaaatatcc agactcagga acaacatcgc gaacacagtg
      721 cagaagagcc actcgcgcca ccgcttcttc tggtccccat gacgcaggtc agcgagcgcc
      781 atggtcacgt gtcgggagtg gccaccgcgg aactcggcgc cgacaagggc ggcgttggcc
      841 gtcagaccag ccagaaacag ccacttgact gattcgtggg acggcacgtc gaggaactga
      901 tcgaacagcg accacgaggc cccaccggcc atgacggcct gggccaacag gatgggcaac
      961 aacaggggtt cctgccagag atcacgaccc tcgcactgac cgaagaggaa ggccgtgtag
     1021 cccgcggtac ccagtgccag cagcacggtt ggcaccacga gcaccgggag cacaccaccg
     1081 gcatcagcca ggccggccac ccaccacgcg gccagacaga cggcgaaggc gcccagcacc
     1141 cacgccccct tgaccagcca cgaggtccag ttgcccttca tcagcaggta ccagaaccgc
     1201 ttcggctgct tgaggtcacc gaccagcagg acgccggtca gcaccaggaa gactccggcc
     1261 accagcggcg gaaccacact gaccaccgat cgctcgtcac cgtggcctag caccaccaac
     1321 agcgaggcga ccagcatcac gcccgccgca atggccttcg tcaccaggta gcccgacacc
     1381 atcgaacccc agaccggcgg gtgctgggtg gtgtaggcgg ttcgggccat gggctcgccg
     1441 tcgtccctgg tgggcgcgac agtcagagcc accggtgtgg gcgtggagtg accgggggtg
     1501 gtgtcggccc agatcaaccc gtcgtcggaa atggctgagg cgagcgggtc caacgacgag
     1561 gcggtggccc ccctgtagat gactttgggc cgggtgttct gctccggcga ccgcaccagg
     1621 cccccgtcgg cgtgcagccg gctgatctca ctgcccggat cgtcgaggtc gcccacccgg
     1681 atggcctggg tggggcacac gatcacgcac gacggctcga ggccgtcctc gatccggtgg
     1741 ttacagaagt tgcacttgtg ggcggtattg gtttcggggt tgagatagat ggcgtcgtaa
     1801 gggcaggcgt tcatgcatgc cttgcagcca atgcagtcgt cgtcctggaa gtcgaccacg
     1861 ccgttgtcgg cccgatacag cgccgacgtg ggacagatgg tcatgcacgg agcgtcttcg
     1921 cactggttgc accgcataac cgagaacagc ctgtcggtgt cggggtgggt gcccgtctcc
     1981 acgtatttga gccacgtgcg gttcacaccc agcggcacgt tgtgctcgct cttgcaggcc
     2041 accgtgcagg catggcagcc gatgcaactg ctggagtcga ggacgaatcc gaggcgagtc
     2101 acgaggcccc tgggaccatc tggtggatac cggcacacaa caggtcgacc aggcggtcga
     2161 agctctcgtc gaggtcgacg ggatgagggt ggccgtcacc ggactcgagg tgggcgaagc
     2221 cgtggagggc gcttcgcatc gaccgggcgg cgtgcacccg gtcgacgtcg gccagcccat
     2281 aggcgaccag cgcctgaccc agaacggcta cgacccgttc aacggcctct tccagctccg
     2341 cgtcaccggc acacgggtag cggtcggtgg ctgcgtagag gcccgggtgg tcaccgacca
     2401 tggcccgcca ggcccgaccc atggcccgaa ccgcgtcgtc gccagccaga cccacggcgg
     2461 cctcgccgag tcggcttgcc aggatctcac ggccccggag tccgagtgcc cggacgaggg
     2521 cgtcgtagct gtcgatgtgc cggtacaggg caggctgacg gaccccgagc agcaaggcca
     2581 cccgggtgag ggtcacggca tcaaggcctt cggagtcggc cagtgcagcc gccgaatcca
     2641 cgacctgatc ggtgtccaac gtccggcggc tcatggtcga accctagtgt tagagactct
     2701 cacgtgccag ttagagggag ccacatttac tgcaacacca tctctctctt catgttgctc
     2761 accacaccac cagcccggca ccaacggtca ccagcacggc accccacatg gcccgtgggc
     2821 cgagggattc ccgggcaatg agcacgccta ggaccaccga aacctgacgg agtccggtca
     2881 cctgcccggc ctgggcctgc tggaaggcca tcaggatcag gccgtacgcc ccgccctgcc
     2941 cgacgcccac caccgcggca tggcccagca ccggtcgaac ccggtccatg ccgggacgcc
     3001 tcaccgtcag gacacctacc gaactgatga tcatgatcac cgacatgtag cccatggccc
     3061 cggtgagatc gacagagcgt gcatcgatca gggagtagcc caccgtgcac aacccggtcg
     3121 ccgcggccag cactacagcc cgaagctctt gacgctgtgt tcccaccccg gccagcgaga
     3181 gcaggccgac gaccaggacg accagaccca tcgccgtgaa cgccgacggg gtctcgtcga
     3241 ggagcagcca acccccgagg ccgaccagca gaggggccgt gccgcgcgcg atcgggtagg
     3301 ccacactgag gctccccgcc cggtaggccg aaccgagcag gcccatgtac aggccttggg
     3361 ccaacgacga ggccagcacc caacccatca cctcgcccgg tgggtcgacc accgcagcgg
     3421 gcagcagcac gatccctacg aagaggtagg ccagcgcgat gaccacttct gggtcacccc
     3481 cccgatgcag gcgggcgttc caaccggcgt ggaggaccgt cgaggccagc acgaggaaga
     3541 cggcagacag cgacaccggt acgtctcctg ttcccgtatt ccggtcaatc aggtgccgat
     3601 agcgccgctt gagcgcgcct gcagcccggc gatgaccgcc acgtcgacga tgtcagccgc
     3661 cgaacagccc cgcgacagat cgtgcaggat cccgtccagc ccctggagga gcggcccata
     3721 ggcccgggcg ccgccgaggc gctcggtgac cttgtaggcg atattgccgc tgtccaggtc
     3781 ggggaacacg aagacgtccg ccgcgccggc caccggtgac ccaggggcct tgacggccgc
     3841 cacggaggga acgatcgccg cgtcgaactg cagctctccg tcgacggtca gatcgggccg
     3901 ccggtcggcg accagtgccg tggcggcccg caccttgtcc acccggggat gttcggcact
     3961 gcccttcgtc gaaaaagaga gcatggccac ccggggtaaa ccgcccccgg agactggacc
     4021 ggccaacccg gtccaggtgt cggccgtcga ggaggcgatg gtggccaact gggacacatc
     4081 ggggtcgggc accacgccgc agtctccgta ggccaccaac cggccatcgg ccagaaccat
     4141 caggaagcag ctcgaaacca tctccactcc gggggccacc cccagaacct tgagtccggc
     4201 ccttaggacg tcggccgtcg accgggtggc cccggccacc gcggcgtcag ctgctccgga
     4261 tcgcaccagc actgtggccg ccacgatcgg gtcgctcacg tctaggcctg catcctcggc
     4321 cctggcgatc gcttcggcct gttgaccgtc gctacggtcc acgatcggat ggacgggctg
     4381 cacaagctct tcgtccacca actggatggc cgcgaagtcg gctcgggggt cacctagatc
     4441 agccagcacc acccgcgccg gatctgtcgc agccagctcg taccacccgg aaacaaccgc
     4501 cgggacgttt gaactccccg gggaactcac cgggcgggaa tctccggatg agctcaaccc
     4561 ttgccacgcc aagggatgag gcgccgctcc aggaaacgca tggccaggtc catggccaca
     4621 ccgatgaccc cgatgacgat gatcgacacg actacgacat ccatccggaa gaacttcgag
     4681 gcagcaaaga tcattgctcc gaggccggtg gtcgtcccgg tcaactcggc ggccaccaat
     4741 gttccccagc acacaccgag ggcgacccgc atgccggtga atatgtctgg cagcgcgttg
     4801 gggagaatca cgtaccgcag gatctgccac ttgttggcac ccagggaata ggcggcgtgg
     4861 accttcgagc cccgcacgcc gagtaccccg gcccgagccg cgatgaccat gatccatacc
     4921 gcagcgaaga acaagaggtt gaccttggaa ccctcgccga tgccgaacca cacgatgaac
     4981 agcggcagca gggccagagg tggcacagga cgcagcaact cgacgatggg gtcgaagatg
     5041 ccccgtagcc ggttggacag gcccatggcg aaaccgacgg gcacacccac gatcaccccg
     5101 tagacgagac ccttgaggac ccgccagaga ctggcccacg tgtggtccca caggctgacc
     5161 cggcggtaac cgtcggtcgc caactcgacg aaggcgtccc acgtctgacg catcgatggg
     5221 aacgtccggt cgttgatcat cggttcggtt ccgctcttga tccaccacca gatgaaggcc
     5281 acgaacagca gtgaggcgac gctccaaagc ggggaaccct tgacctccga ggcatcgccg
     5341 aaggtcacgg tcttgcggcc actggccccc ttgcgaaccg ctcccgcgtg gccggcgagc
     5401 ctgctgggga tgctcacgac acacctccat cgtggcccat gatctgctcc tccatctccc
     5461 agatgagcga cagcaactcc tcgcgcttct cgatgaactc gggcgaggct ttcatctcac
     5521 ggggatcgac gtggagcccc ttggccgcga acggcaactc gtattcgcgc tccacgcgac
     5581 ccggacgcgg agccatcacg aagaggcgat cacccaggta gagggcctcc tccacgctgt
     5641 gggtgaccag aacgatcgtc tttcccgtct cctgccagag cttcaggatg agactctgca
     5701 tcttctccct ggtgagggca tcgagggcac ccaacggctc gtccatgagg atgatctcag
     5761 gatcgttggc gaggcatcgg gccagggcga cccgctgctg catgccaccg gagagttcgt
     5821 agaccgcctt gtcgccgaag ccctgcagac ccaccgtggc cagcaggtcc tggaccaact
     5881 cgttggtctc ggatcgcttc tttcggttca tccggggtcc aaaggccacg ttctgagcca
     5941 ccgactgcca ctcaaacagg gcgccctgct ggaagaccat gccccgctct tggccgggcc
     6001 ccctgatggg gtcgccaccg agggttaccg accccgacgt gggagccagg aagccggcga
     6061 tgatgttgag caacgtcgtc ttgccgcacc cggagggccc aagcagcgtc agcaaccgcc
     6121 cggcctcgag gtcgaacgag acgtcgtgca aggcctgaac cgagccaccc ttcggcaact
     6181 cgtagaccat gcccagcccc tcgactgaaa gattcttcac gtttcggtcc ccctcagtac
     6241 cggtgtcgtt ccccgaccga tccctgtcgg tctagtcgtt gtcgcccagc catgcatcga
     6301 cccggtcgat cacccggtcg atccgggcca ccaggtcgtc gatgatcgca cggtctgcga
     6361 ccagcggtgg cgagatggtc aggccggtgt agccacgatc atcgggccgc accgtcatcc
     6421 gctcttcgcg gacgaagccg cccaacgccc cgccccgcag gccggtctcc tgggtggggc
     6481 tgaggtcgcg gtcgtcagcc gagtcagcgc aaaggtccac ggcgtagaag tagccggtgc
     6541 cccgaacctc gcggaccgac cgatgggcac cacccatcgc ctgcaactgc tcggtgaagt
     6601 agccctcgtt gtccagcaca tgctgcaaca cgccctcgtc acgcatggca gtcatgttgg
     6661 ccacggccac cgcagtggcc accggatgcc caccgaacgt cgagccgtgc acgtacgaac
     6721 ccatgggcga gtcgaacagc tcctcgacca gctggccacg gatgaccacc ccgccgagcg
     6781 gctggtaggc agaagtaacg cccttggcga aggtgatcat gtcgggcacc acgtccagac
     6841 gctcgctggc gaaccagtgg ccgaaccgac cgaacgagca gatgacctca tcggccacca
     6901 gcaacacgcc ataccggtcg cagatgcgac gaagctcctg ccagtagccg ttgggcggca
     6961 ccagggcacc accaccgttc tgaaccggtt cgccgataac catcgagatg gtctcggggc
     7021 cctcggccag aatcatctcc tcgatggcct gcacacagga cagttctgcg gccggggtgc
     7081 cgaccggaga ggtgcactca cgggtattgg agacatggcg ggtgccgtcc cacagcatcg
     7141 gcagatacgg atcccggaac ttggggatac cggtgaccga aagcgccccc agcgtcgtgc
     7201 cgtggtaggc ccagttacga gagatgacct tgtagcgagc ctcgtctccc cgggccaggt
     7261 gatagttgcg ggcgaacttg atggccgact ccacagcttc ggaccccgag ctcacgaaga
     7321 acgtctcgct cagatcccca ggggcaaagc cggcgatcat ctccgcggcc tcaatggctg
     7381 gcgggtgagc gaacccccag ttggtggagt aggcaagctt gttcatctgc ttggccgccg
     7441 cgttcgatag atcgggccga ccgtgaccga tgttcacgca gaacagaccg gctaggccat
     7501 cgaggtactc gactccgtcg gcgtcgtaga ggtagcagcc ctcagctcgt tcgatgatgg
     7561 gcagggcatc gttctgccat gccgccttcg gtgtgaagtg gggtacgaga tgcttctggg
     7621 cgagttctcg atgggtgctc atggatcctc cgctggggat gcggtcgtac actgcgcgga
     7681 ccggtcgtag gtgactggcg tcactgacgt tagagcctgt aacgtaatcg ctaagtcttc
     7741 taacagcaag ggcccggagc gacgaccccc caaccgggcg gaaacaccgg caacccgaga
     7801 tccccggagt ccctccacat ggccaaacag atccccgagc gggcccaggt cgtcatcatc
     7861 ggtggtggca tcgtgggtgc cagcatcgcc taccacctca ccgagttggg ttggaccgac
     7921 gtcgtcctac tggaacgcaa cacgctaacc agcggcacca cctggcacgc cgctggcctc
     7981 gtgggctgcc ttcgggccac ccagaacatg acccgactgg ccgcctactc cgccgagttg
     8041 tacgagtccc tcgagcgcga catgggacat gcaaccggct tcaagaaggt cggatcgctc
     8101 agcgtcgccg acaacccgga acgcatggag gagttggtgc gcggtgccgg catggccaac
     8161 acgttcgacg ttgaggtgga agtcatatcc gctgacgacc tgtgcgcccg ctatccgctg
     8221 ttgaaccccg acggcatcgt gggaggtgtc tggctacccg gcgacggtca ggcctcgcca
     8281 gtgg
//
LOCUS       DASCMR010000090         1654 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000473932, whole genome shotgun sequence.
ACCESSION   DASCMR010000090 DASCMR010000000
VERSION     DASCMR010000090.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1654)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1654)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1654
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000473932"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..389
                     /locus_tag="QGG16_02325"
     CDS             <1..389
                     /locus_tag="QGG16_02325"
                     /inference="COORDINATES: protein motif:HMM:NF012616.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="rRNA adenine N-6-methyltransferase family
                     protein"
                     /protein_id="HJP24142.1"
                     /translation="EVADRLVAGPGDDAYGLPSVKVAYHAVGRLVGRVPPSVFLPRPN
                     VDSALVEVVRRPEPAVDADQGRLFGLVRAGFGQRRKMLRRSLAGLVDEAVIVAAGVDP
                     TERAEELSLEQWAALVDASGPVGANS"
     gene            386..1126
                     /locus_tag="QGG16_02330"
     CDS             386..1126
                     /locus_tag="QGG16_02330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HJP24143.1"
                     /translation="MTTEVLVAPAKLTLSLRMVGLRADGYHLIDAEMVALDLADELVV
                     GPPTGGGTLTIEDLTGGGGLTVPGDSDDLVARALRLVDRTVDVVVHKVIPAGSGLGGG
                     SADAAAVLRWAGLTDLVAAARIGADVAFCLMGGRARVAGIGEIVEPLPFEEQVFTLLT
                     PPVGCPTPAVYRRWDEMGGPTGEHGNDLEPAAVDLVPELVRWRDVLGDATGRRPRLAG
                     SGSTWFVEGEYPGGGRRVVRTIPQAAMA"
     gene            complement(1135..1233)
                     /locus_tag="QGG16_02335"
     CDS             complement(1135..1233)
                     /locus_tag="QGG16_02335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003402602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AURKAIP1/COX24 domain-containing protein"
                     /protein_id="HJP24144.1"
                     /translation="MGSLIKKRRKRMRKKKHRKMLKRTRAQRQRGK"
     gene            1371..>1654
                     /locus_tag="QGG16_02340"
     CDS             1371..>1654
                     /locus_tag="QGG16_02340"
                     /inference="COORDINATES: protein motif:HMM:NF012601.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019239 - deaminase activity [Evidence
                     IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HJP24145.1"
                     /translation="MDASRTEDESLLDLAIVEARAGLAEGGIPIGAVLVVDGEVLGAG
                     HNRRVQQGSAILHGETDALEAAGRLPASTYARATMVTTLSPCHMCTGAVLL"
BASE COUNT          222 a          514 c          623 g          295 t
ORIGIN      
        1 aggaggtggc cgaccgtctg gtggctggtc caggtgacga cgcctacgga ctgcccagtg
       61 tgaaggtggc gtaccacgcc gtcggacggc tggtcggccg agtgccgccc tctgtcttcc
      121 tgccccgccc gaacgtcgac tcggccctcg tcgaggtggt acgtcggccc gagccggctg
      181 tcgacgccga ccaaggtcgg ttgttcggcc tggtccgggc agggttcggc cagcgccgca
      241 agatgctgcg ccggtcgctg gccgggctag tcgacgaggc agtcatcgtg gccgcgggag
      301 tagatccgac cgagcgggcc gaagaactga gtctcgagca gtgggcggcg ctggtcgacg
      361 cgtccggccc ggtgggtgct aattcatgac gaccgaggtg ctggttgctc cggccaagct
      421 caccctgtcg ctgcggatgg tcggcctccg agccgacggc taccacctga tcgatgccga
      481 gatggtggcc ctggacctgg ctgacgaact ggtggtcggt ccgccgacgg gcggcggcac
      541 gctaacgatc gaggacctca ccggcggcgg cgggctgacg gtgcccggag actctgacga
      601 tctggtggcc cgggcgttac gtctggtcga ccggacggtt gatgtggtgg tccacaaggt
      661 gattccggcg ggttcgggcc tcggtggcgg gtcggccgat gcggcagcgg tgctgcgctg
      721 ggcgggcctc actgatctgg tcgccgcagc gcggatcggc gccgacgtag cgttctgcct
      781 gatgggtggc cgggcccggg tggccggtat cggcgagatc gtcgagcccc ttccgttcga
      841 ggagcaggtg tttaccctgc tgacaccgcc tgtcggctgt ccgacgcccg ctgtctaccg
      901 acggtgggac gagatgggcg gcccgacagg cgaacacggc aatgacctcg agccagcggc
      961 cgtggacctg gtgccagagt tggtgcgctg gcgggacgtg ctcggggacg cgacgggtcg
     1021 ccgtccgagg ctggccggca gcgggagtac gtggttcgtg gagggggagt atccgggagg
     1081 cggtcgccga gtcgtgcgga cgattccaca ggcggcgatg gcctgagatt aggactactt
     1141 gccccgctgc cgctgggcgc gggtgcgctt gagcatcttg cgatgcttct tcttgcgcat
     1201 gcgcttacgg cgtttcttga tcagggatcc catgacgggc cgcagactaa cggcgccgtc
     1261 gaggattgcg acggccggcg tggtgggaac cgatcattcg aacgtcaggt ggtgcactcc
     1321 ctcttcggcc ccgttgcccc tcgaccgctt ggcgatggga ggctatgccg atggatgctt
     1381 cgcggaccga ggatgaatcc cttctggacc tggccattgt cgaggcccgt gccgggcttg
     1441 ctgagggtgg catcccgatc ggagcggtgc tggtggtcga cggcgaggtg ctgggcgctg
     1501 gccacaaccg acgggtccag cagggctcgg ccatcctcca cggcgagacc gatgccctcg
     1561 aggcggccgg ccggctacca gcgtccacct atgcccgagc cacaatggtc accacgcttt
     1621 caccgtgcca tatgtgtacc ggcgcggttc ttct
//
LOCUS       DASCMR010000091        15144 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000481284, whole genome shotgun sequence.
ACCESSION   DASCMR010000091 DASCMR010000000
VERSION     DASCMR010000091.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 15144)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15144)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15144
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000481284"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..377)
                     /locus_tag="QGG16_02345"
     CDS             complement(<1..377)
                     /locus_tag="QGG16_02345"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF025892.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016790 - thiolester hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HJP24146.1"
                     /translation="MEQESSADLTATIRRIMPFCEVLGLTVVETSPDRVEATVEWTEQ
                     RTTVFGGLHGGYVMAVADSTGALCAAQNLPTGAGTSTIESKTNFLRPISSGTATIVST
                     PVHVGRTTIVVQTEVIRDDGKTAA"
     gene            complement(406..1719)
                     /locus_tag="QGG16_02350"
     CDS             complement(406..1719)
                     /locus_tag="QGG16_02350"
                     /inference="COORDINATES: protein motif:HMM:NF012766.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HJP24147.1"
                     /translation="MNEDTPTRDQTNDPMVRRAATTGHRMAMGPGEPALSEWAAAGLD
                     LPDETAMMRYRLDRTVTQLADAEVDGILLFDPLNVMYVTYAPNMQVWVLHNQARYAFV
                     GADGTLILFDYPGCEFLSAHNQFVTDVRPARAFTYFLAGDRIDEQSKVFAQEIADAAR
                     THGMGSRRIAVDSSTTAGITSLLDEGLTLVEGTRIMEQARKIKGPDEIRAMRCSVEAT
                     FVSCRRMFEAMRPGMTENQLWGVLWAEMLARHGEWMECRLLTAGDRTNPWFQECSAAV
                     IGNGDVVAFDTDLVGAFGMMTDISRTWVCGDVPPTPAARHAHDLAVEQITRNTELFEP
                     GATFHELVHKAWYPPEEEYRHYSVLSHGVGQCDEYPSLPFPSAWDNSGYDGVLEPGMV
                     LTVESYVGARSGGQGVKLENQLLITETGHENLSPWTLDLERFERL"
     gene            complement(1756..4329)
                     /locus_tag="QGG16_02355"
     CDS             complement(1756..4329)
                     /locus_tag="QGG16_02355"
                     /inference="COORDINATES: protein motif:HMM:NF013434.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJP24148.1"
                     /translation="MADLPESAQVVVIGGGVVGASVLYHLTKAGWTDAVLLERRELTA
                     GSTWHAAGGMHTLNGDPNVAALQRYTVQLYEDLEKESGVSCGVHLTGEVMLADDPDRM
                     DWLRMAHARGRYLGMETELISVAEAAEKIPFLVEEHFVGALWDPVGGHVDPSGVTHAY
                     ATAARMAGAQVHRNTWAHDVAQRPDGLWDVVTERGTITCEHFVNCGGLWAREVGRMCG
                     IELPILAMEHMYLLTEEIPEIRPWLDATGGYGIGAVDFGGEIYTRAEAGGLLLGTYEQ
                     ACVPWSERETPWDFGSQLLTPDLERLAPSLALAFEHFPIYADAGIRQVINGPFTFAPD
                     GNPVIGPVKGQRGHWVACGVMAGLSQGGGVGLSMANWMTTGDPGFDVWGMDVARFGDW
                     TTPSYTRAKVMENYSRRFSISFPNEELPAARPLYTSPIHDRLDDANAVWGSSYGLETA
                     LWFQRDGAEPIEDVTYHRSNAFDVVADEVHAVRTGVGLIETTGFAKHQFTGPGARALL
                     DRVLANRIPTPGRMALAPMLNHDGKLIGDFTVATLAEPFDGAETFLVLGSGVAEGYHE
                     RWFREQIVSHLADGGDGDVNYRPLGTELAGLSIAGPKARDVLASVVGPTSPSSGGTGS
                     DVSANAFAFRDIQRMDLGMVPAIVGRITFTGDLGYECWVPASLQQRLFDLLMEAGEPH
                     GIRLFGLRALDSMRFDKGFGGWASEFRPIYTPAESGLDAFVALTSLDGSARNFIGRDA
                     AATARATGPERRLCTFTLDDGGTPTGENGSGTTVGSAASDVLGDEPIWHGGEVVGWAT
                     SGGYAHWSQASCAMGYVPAAAADPATPPDAFEIEVLGVRRPATRRDEPLFDPTGIRMR
                     G"
     gene            complement(4355..6013)
                     /locus_tag="QGG16_02360"
     CDS             complement(4355..6013)
                     /locus_tag="QGG16_02360"
                     /inference="COORDINATES: protein motif:HMM:NF018012.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine methyltransferase family protein"
                     /protein_id="HJP24149.1"
                     /translation="MSLWPIPTRTENSTWRQAASPCRSTKDSPDGPTVGNGTGVPLMS
                     GSRRGRLSGRSRIRDVIGEQPPWQQPRMRFDPLRAVSDDELESIHLASLRVLSETGID
                     FLDDTARRQLADAGCDVSDNRVRFDPELVQHLIATAPAEFTLHAPNPDRDLHIGGDVI
                     TYTSVASPPFVTGLGRDRRDGNRDDYRELLKLGQVLNVVHTVAGYPVEPMDLHPSVRH
                     LHATHDMLTLSDKVPFVYSLSRQRNLDAIEMTRLARGVDDHTMSAQPSLYSVINASTP
                     LRYDTVMLHGIQEMSARNQCIVITPFTLAGAMAPVTVVGALVLQNAEALAGIAYTQVV
                     RPGAPVIYGGFTSNVDMRSGAPAFGTPEYWKACLIGGQLARRYDLPYRSSNVNASNSV
                     DSQSATESTIAVWGAVMGGVNLLLHGTGWLEGGLLTSFEKFVIDADLLNMVTAMLQPV
                     TIDDAALAVEAIAEVGPAGHFFGTQHTQDRYATEHFQPLVSKWSNFEMWDEEGRVESH
                     HRAEALARTLIDAHVEPSMAPERRAGIDEFLSRRVAEGGVETDY"
     gene            complement(5925..7148)
                     /locus_tag="QGG16_02365"
     CDS             complement(5925..7148)
                     /locus_tag="QGG16_02365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mandelate racemase/muconate lactonizing enzyme
                     family protein"
                     /protein_id="HJP24150.1"
                     /translation="MLIRDVETFVVGNPPPRHGGRYFIFVKLTTDDGIEGIGEAYVAT
                     VGPHLVAEMIVDVADRHLVGHRPFDVESFWRRAYGSGYALRPDPTLCGIISALEMACW
                     DIIGKATGRPVYDLLGGRVHEGLRSYTYLYPDDGDAYDPLDGPNLYSNPDLAAEAAVR
                     AVDQGFTAVKFDPAGPYAVFDGRQPSLERLDLSERYTRAVREAVGNRADLLFGTHGQF
                     TPSGALRLARRLEAYDPLWFEEPVPTDDLEGMARVAAGTTIPVATGERLTTVSEFAAV
                     LRAGAASILQPDLGRSGGILQGKKIAAIAEVHQALLAPHCYCGPVVAAANIALAACTP
                     NFLVLESIDRFDGFHADLLETPIRWEDGMVIPSTEPGLGVVLDEHVALAHPYEDGELH
                     LEAGGEPMSFNEGLA"
     gene            complement(7142..8371)
                     /locus_tag="QGG16_02370"
     CDS             complement(7142..8371)
                     /locus_tag="QGG16_02370"
                     /inference="COORDINATES: protein motif:HMM:NF012335.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HJP24151.1"
                     /translation="MSTGRGITIRAAVSRGVGIPTEIENVHLAAPGPGEVRVEVAACA
                     VCPSDLSCLDGTWVTEFPLVLGHEATGRILEIGVEPEADDELTDLSVGDPVVISLIRT
                     CGDCRACLRGHDVACTGDIALNATSPLTDAGGAPLIQGLAVGGFATQVVVDRSQVVPL
                     PADVDLVAASLLGCGVLTGSGAVTNTARVAAGDTVVVVGCGGVGIGAIQAARLAGAHP
                     IVAVDPAIDKRDAALGFGATHTADPTADPTGGSTGSGHPGGHLAAVITEATGGHLADH
                     VLVTTGAPAALDGAIDLLAPMGQLVIVGMAGDDVTIDVAPSWLAAANKSILGSKMGTA
                     RVAVDVPALVDHHRAGRLDLAGMVSSTHTLDDIQDAFDEVWRGDVVRTVVLPNGTVTG
                     NPTTAATSTAAGGPAAC"
     gene            complement(8480..9505)
                     /locus_tag="QGG16_02375"
     CDS             complement(8480..9505)
                     /locus_tag="QGG16_02375"
                     /inference="COORDINATES: protein motif:HMM:TIGR03559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HJP24152.1"
                     /translation="MQLGLSLGYWGAQPPADLVDLVQEAERLGYDAAWTAESWGSDAF
                     SPLVWLAAHTERIRLGTGIVQMSARTPTATAMHAVTLDHLSNGRLILGLGVSGPQVVE
                     GWYGQPSNRPLARTREYVEILRQAFRRDDHLSFDGDFHQHPYVGEGSTGLGKPLKVMV
                     HPLRADIPIFIGAEGPKNVTQTAEIADGWLPLYYSPYRPEVYADQLVGAPAHFEVALN
                     LAVTVTEDDSTDAIASALAPVKAMLGFYVGGMGAKGQNFHTKLMARMGFATEADRIQD
                     LFLEGRRDEAIAAVPDRFADEISLIGTPERIRDRLAAFEESPVTMLNVAPRSAGHLAQ
                     VAEILLG"
     gene            9624..11846
                     /locus_tag="QGG16_02380"
     CDS             9624..11846
                     /locus_tag="QGG16_02380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HJP24153.1"
                     /translation="MIEATETFPRQHARTRRFTCGVPRDIRVADDGSRVVFLRSFSGD
                     DPINALWWMDPVTGEERLIADPGALSPGDIADGEGPCKGADGVPAAELARRERVRESG
                     GGIVAYDGLPDLSRLCFVLDGRVFLAEVPRHGDTGDDQGPVARVVELPSSGGAFDPRL
                     SPDGTAVAYVSGASVRTTGPGGDRRVIGGSTPTVSWGSAEFVAAEEMGRNRGHWWSPD
                     GRRMLISRVDTAPVAEWWISSPTEPATPPRAIRYPAAGTVNATVGLALVDLDEAAPTT
                     EGATGSSTIDVDWSQGATFEYLADVHWPVEGRPLLVVQTRDQRTLAVLEVDPSTGAVE
                     ERHRTTDEHWVDLVPGSPLVANGSLFTVESRDGAYRLVQDGIVLFPNSLDGVQVRSIV
                     GADGDGDGDRAGVVVRASADPMDVDVLRIPLDDGLVETVSGGGGLRSAVVGGGVTVVT
                     VADLAGSTTTVHPGGFALSSHAEKPVVQPRPTFHVVGDRSLRVAVLLPDGHDGSPLPV
                     LLDPYGGPHAQRVQRVRGQYLTSQWFADRGFAVVVADGRGTPGRGPAWDRAVRGNLAA
                     PVLEDQVDALHAVATTDDRLDLGRVAIRGWSFGGYLAALAVLRRPDVFHAAVAGAPVA
                     DWRLYDTHYTERYLGHPDVEPENYLRSGLCSAEDWAPRGVDVPDRPLLLVHGLADDNV
                     VVAHTLALSRALLEAGRPHQVLPLSGVTHMTPQVEVAENLLLVQLVFLQKSLGLAPLI
                     "
     gene            complement(11886..12680)
                     /locus_tag="QGG16_02385"
     CDS             complement(11886..12680)
                     /locus_tag="QGG16_02385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJP24154.1"
                     /translation="MDSTSGQTPDGVLQRFRLDGRVVVVTGASSGLGERFARVLSDVG
                     ARLVLAARRTERIQALADELPDALAVSVDVAADDGPEHIINSAIDHFGRIDVLVNNAG
                     ISRVVPAVDDDLDGFRHELAVDLVAPYELARRAARWWISENHPGVVVNVGSVLGQVSG
                     GRLRVPGYAAAKGGLHNLTRELAVQWARKGIRVNALAPAWFETEMNSDDMFHTNAGRS
                     YVESGTPMGRGGLAHELDGALLLLASDAGSYLTGHILAVDGGWTAV"
     gene            complement(12691..13380)
                     /locus_tag="QGG16_02390"
     CDS             complement(12691..13380)
                     /locus_tag="QGG16_02390"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJP24155.1"
                     /translation="MPPSPEPDAGLDRESSPEPVLKLDGTATVGDLTLRVALDVLPGE
                     LVAVVGPNGAGKTTLLRLLAGLVRLNDGRLDLGRRTVDDGSDRGFVPAHFRRIGWVPQ
                     DRLLFEHLTVAANVGFSPHSTPDRVDSLLALLHLQDLVDRRPNECSGGQAQRVAVARA
                     LATDPDLLLLDEPSTALDAGSRRQIHALLGDRDQRPATLLVTHDPTEAADLADRVLEL
                     TAGQIAGAPPL"
     gene            complement(13386..14174)
                     /locus_tag="QGG16_02395"
     CDS             complement(13386..14174)
                     /locus_tag="QGG16_02395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP24156.1"
                     /translation="MTRPPNAPRSVLVVAALAMAFLTLPVLALLQRAPWSGLVNLLRR
                     REVVEALGVSLLVSLTAAGIVLVLGTPMAWVLARVAVPFRRLVRTLVVLPMVLPPVVG
                     GTALLFALGRRGLVGQWLERWFDVTLPFTTAGAVVAATFVALPFYVITVEGALRTSGE
                     DLEQVAATLGADPLTVLRRITVPRLIPAMGAGLALAWARALGEFGATITFAGNLPGRT
                     RTLPLATFQALESDPEAAVALSLVLLAVSLAVLLPTRHRWLPTR"
     gene            complement(14171..14932)
                     /locus_tag="QGG16_02400"
     CDS             complement(14171..14932)
                     /locus_tag="QGG16_02400"
                     /inference="COORDINATES: protein motif:HMM:NF024921.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HJP24157.1"
                     /translation="MWTHLSSRAILLAVVAWLGATGCTESPGDTALTVFVASSLTDVA
                     ADLADEWASTSGVVVELVAGGSNHLAAQVRDGAPADAFLTADADLFDDLQRRLLLNQA
                     TDQVADHVPTAIHDLAINHLVVARPTTGPERRPADLRDPSLVLVACAAGVPCGDAAAA
                     RFGDLPVDSFEPSARAVVARLALDEADLGIVYATDVSAHAGLAPAWPQKPTCPCITYA
                     AASLSLSGNPFVTFLTSDQARKILTEHGFVTGPTR"
     gene            complement(14961..>15144)
                     /locus_tag="QGG16_02405"
     CDS             complement(14961..>15144)
                     /locus_tag="QGG16_02405"
                     /inference="COORDINATES: protein motif:HMM:NF015424.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TOBE domain-containing protein"
                     /protein_id="HJP24158.1"
                     /translation="TGLVTRVVRDGVMAQVEIQAGPHRVVSLLSAEAVDELGLEPGVL
                     AVAAVKATNVVVERPR"
BASE COUNT         2403 a         4854 c         5395 g         2492 t
ORIGIN      
        1 gccgctgtct tcccgtcgtc gcggatcacc tcggtctgga ccacgatggt ggtgcgacct
       61 acgtgcaccg gggtggacac gatggtggca gtgcccgagc tgatgggtcg aaggaagttg
      121 gtcttggatt cgatggtcga cgtgccggct cctgttggga ggttctgggc cgcgcacagg
      181 gcgcccgtcg agtcggccac ggccatgacg tagccgccgt gcagcccgcc gaacaccgtg
      241 gtccgctgtt cggtccattc cacggtggcc tcgacccggt cgggtgaggt ctcgacgacc
      301 gtcaggccga gtacctcgca gaatggcatg atccggcgga tagtggccgt caggtcagcg
      361 gacgattcct gttccattgg tcgagtctgg caggcggcca gcggttcaga gcctttcgaa
      421 gcgctccagg tccagcgtcc acggactgag gttctcgtgg cccgtctcgg tgatgagcag
      481 ctggttctcc agcttcacac cctggccgcc agaccgggcc cccacgtagg actcgacagt
      541 caggaccatg ccgggttcga gcactccgtc gtagccggag ttgtcccagg cgctggggaa
      601 cggaagcgac gggtactcgt cgcactggcc gaccccgtgg gacagcaccg agtagtggcg
      661 gtactcctcc tcgggtggat accacgcctt gtggaccagt tcatggaatg tggcaccggg
      721 ttcgaagagt tcggtgttgc gggtgatctg ctcgacggcc aggtcgtggg cgtggcgggc
      781 cgctggtgtg ggtgggacat caccgcacac ccaggtccgc gagatgtcgg tcatcattcc
      841 gaaggccccc acgaggtcgg tgtcgaaggc caccacgtct ccgttcccga tgaccgcggc
      901 gctgcactcc tggaaccacg ggttggtgcg gtccccggcg gtcagcagtc ggcattccat
      961 ccactcgccg tggcgggcca gcatctcggc ccacaacaca ccccacagct ggttctcggt
     1021 catgccgggg cgcatggcct cgaacatcct ccggcatgag acgaacgtgg cctccaccga
     1081 gcaacgcatg gcgcggatct cgtcggggcc cttgatcttt cgggcctgtt ccatgatccg
     1141 tgtgccctcc acgagggtca ggccctcgtc gagcagcgac gtgatgccag cggtggtcga
     1201 ggaatccacg gcgatccgac gggaccccat cccgtgggtg cgggccgcgt cggcgatctc
     1261 ctgagcgaag accttggact gctcatcgat ccggtcgccg gccaggaagt acgtgaaagc
     1321 ccgggctgga cggacgtcgg ttacgaactg gttgtgggct gacaggaact cgcagccggg
     1381 gtagtcgaac aggattagcg tgccgtcggc gcccacgaag gcgtagcggg cctggttgtg
     1441 gagcacccag acctgcatgt tgggtgcgta tgtcacgtac atgacgttca aggggtcgaa
     1501 taacaggatc ccatctacct cggcgtcggc cagctgggtg acggtgcggt ccagccggta
     1561 gcgcatcatg gccgtctcgt cgggcagatc caggccggcg gctgcccatt cggaaagcgc
     1621 cggctcgccg ggccccatgg ccatccggtg gccggtggtg gccgcccgtc ggaccatcgg
     1681 gtcgttcgtc tggtcccgtg tcggggtgtc ttcgttcaag gagttctctc ctgccgttct
     1741 ggttctcggc ggtcgtcagc cccgcatccg gatgccggtt gggtcgaaca gcggctcgtc
     1801 tcgccgggtg gctgggcgac gcacaccaag cacctcgatc tcgaaggcat cgggcggcgt
     1861 ggccgggtcg gctgccgctg cgggcacgta gcccatggcg cacgaggcct gcgaccagtg
     1921 ggcgtagccg cctgacgtgg cccaacccac cacttcaccg ccgtgccaaa tcggctcgtc
     1981 gcccaacacg tcggacgcag cactgcctac cgttgtcccg ctgccgtttt ccccggttgg
     2041 cgttccgccg tcgtcaaggg tgaacgtgca gaggcgacgt tcggggccgg tcgcccgggc
     2101 tgtcgccgcg gcatctcggc cgatgaagtt ccgggcggag ccgtccaacg acgtgagtgc
     2161 gacgaacgca tcgagcccgg actcggcggg cgtgtagatg ggccggaact cgctggccca
     2221 gcccccgaag cccttgtcga accgcatcga gtccagtgcc cgcagcccaa acagtcgaat
     2281 gccgtgtggt tccccggctt ccatcagcag gtcgaacagc cgttgctgca gcgaggcggg
     2341 aacccagcat tcgtagccca ggtcgccggt gaacgtgata cggccgacaa tcgccggcac
     2401 catgcccagg tccatccgct ggatgtctcg gaacgcgaag gcattggccg acacgtctga
     2461 acccgtcccg ccggagctgg ggctggtggg gcccaccacg gaggccagca cgtcgcgggc
     2521 cttcgggccg gcgatggaga gcccggctaa ctcggtgccc agtggtcgat agttgacgtc
     2581 accgtcaccg ccgtcggcca gatgcgagac gatctgctcg cggaaccagc gctcgtggta
     2641 gccctcggcc acgccggagc ccagtactag gaaggtctcg gcaccgtcga acggttcagc
     2701 caacgtggcc accgtaaagt ctccgatgag ctttccgtcg tggttcagca tgggggccag
     2761 cgccatacgg cccggcgtcg gaatgcggtt ggccagtaca cggtcgagca gcgcccgggc
     2821 gcccggtccg gtgaactggt gcttggcgaa cccggtggtc tcgatgagac ccaccccggt
     2881 gcgaaccgca tggacctcgt cggccaccac gtcgaaggcg ttggaccggt gataggtgac
     2941 gtcctcgatc ggctcggcgc cgtcccgctg gaaccacagg gcggtctcca gcccgtagga
     3001 ggagccccac acggcattgg catcgtctag acggtcgtgg atgggtgagg tgtacaacgg
     3061 acgggcggcc ggcagctcct cgttgggaaa cgaaatggag aaacgtcggc tgtagttctc
     3121 cataaccttg gccctggtgt aactcggagt cgtccagtcg ccgaagcggg ccacgtccat
     3181 gccccacacg tcgaatccgg ggtcgccggt ggtcatccag ttggccatgg acagaccgac
     3241 gccgccgccc tgactgaggc cggccatcac gccgcaggcc acccagtggc cacgctggcc
     3301 cttgactggt ccaatgaccg ggttgccgtc gggcgcgaag gtaaacgggc cgttgatgac
     3361 ctgtcgaatc ccggcatcgg cgtagatggg gaagtgctcg aaggccaagg ccagtgacgg
     3421 ggcgagtcgt tcgaggtctg gggtgagcag ctgggatccg aagtcccatg gggtttcccg
     3481 ttcagaccac ggcacgcagg cctgctcgta ggtgcccaat agcaggccgc cggcctcggc
     3541 ccgggtgtag atctcgccgc cgaagtcgac cgctccgatg ccgtacccgc cggtggcgtc
     3601 gagccacggt cggatctcgg ggatctcctc ggtcagcagg tacatgtgct ccatagccag
     3661 gatgggcagc tcgatcccgc acatacggcc cacctcgcgg gcccacaggc cgccgcagtt
     3721 cacgaagtgc tcgcacgtga tggtgccccg ctcggtcacc acgtcccaca ggccgtcggg
     3781 ccgctgggcc acgtcatggg cccacgtgtt gcgatggacc tgggcgccgg ccatccgggc
     3841 cgccgtggcg taggcgtggg tgacgcccga cgggtcgacg tggccgccca ccgggtccca
     3901 cagggcgccc acgaagtgtt cctcgactag gaacgggatc ttttcggcgg cctcggccac
     3961 cgagatcaac tcggtctcca tgcctaggta gcgacctcga gcgtgggcca tgcgaagcca
     4021 gtccatgcgg tcggggtcgt cggccaacat gacttcgccg gtcaggtgga cgccgcacga
     4081 tacgcctgat tccttctcga ggtcctcgta gagctggacg gtgtagcgct gcagggcagc
     4141 cacgttgggg tcgccgttaa gggtgtgcat gccgcccgcc gcgtgccacg tggaccctgc
     4201 ggtcagttcc ctgcgttcca acaggacggc gtcagtccag ccggctttcg tgaggtggta
     4261 gaggacgctg gcaccgacga cgccaccacc gattaccacg acctgtgcgc tctcggggag
     4321 gtctgccatg gaagtgcttc tcctagttac gggatcagta gtcggtttcg acgccaccct
     4381 cggcgacccg gcgggatagg aactcgtcga tgccggcccg gcgctcgggt gccatggagg
     4441 gctcgacatg ggcgtcgatc agggtgcggg ccaaggcctc agcccgatgg tgagattcga
     4501 cgcggccctc ttcgtcccac atctcgaagt tggaccattt tgagactagg ggttggaagt
     4561 gttcggtggc gtagcggtcc tgggtgtgct gggtgccgaa gaagtgtccg gccggcccca
     4621 cttcggcgat ggcctcgacg gccagggcgg catcgtcgat ggtcacgggt tggagcatgg
     4681 ccgtcaccat gttcagcagg tcggcgtcga ttacgaattt ctcgaaggag gtcagcaggc
     4741 cgccttccag ccaaccagtg ccgtggagga ggaggttgac gccacccatg accgctcccc
     4801 aaacggcgat ggtgctctcg gttgccgact ggctgtcgac gctgttggac gcgttgacat
     4861 tcgacgagcg gtagggcagg tcgtagcgcc gagccagctg gccgcctatt aggcaggctt
     4921 tccagtactc gggggtgccg aaggctggtg ctccggagcg catgtcgacg ttggaggtga
     4981 agccgccgta gatgaccggg gccccgggtc ggaccacctg tgtgtaggcg atgccggcca
     5041 acgcctcggc gttctggagc accagggcgc cgaccaccgt caccggtgcc atggcgcccg
     5101 ccagagtgaa tggggtgatg acgatgcact gattgcgggc cgacatctcc tggatgccgt
     5161 ggagcatcac cgtgtcgtag cgcagtgggg tactggcgtt gatgaccgag tacagcgacg
     5221 gctgggcgct cattgtgtgg tcgtcgactc cccgggccag gcgggtcatc tcgatggcgt
     5281 caaggtttcg ttggcggctg aggctgtaga cgaacggcac cttgtccgag agggtaagca
     5341 tgtcgtgagt ggcatgcagg tggcggaccg acgggtggag gtccatgggt tcgaccgggt
     5401 agccggccac cgtgtggacc acgttgagta cctggccgag cttgagcagt tcgcggtagt
     5461 cgtcgcggtt gccatcacgg cggtcacgac ccagcccggt cacgaacggg gggctggcca
     5521 cgctggtgta ggtgatgacg tcgccgccga tatggaggtc acggtccggg ttcggggcgt
     5581 gcagggtgaa ctcggccggg gcggtggcta tcaggtgctg gacgagttcg gggtcaaagc
     5641 gaacccggtt gtcggacacg tcacatccgg cgtcggctaa ctgtcggcgg gccgtgtcgt
     5701 ccaggaagtc gataccggtc tcggacagga cccgcagcga ggccagatgg atggactcca
     5761 gttcgtcgtc ggacacggcc cgcaatgggt cgaatcgcat gcggggctgc tgccacggcg
     5821 gttgctcgcc tatcacgtcg cggatccggg aacgcccgct gagacgtccc cgtctggagc
     5881 cgctcatcag ggggacaccg gtgccgttgc cgacggtcgg gccatcaggc gagtccttcg
     5941 ttgaacgaca tgggctcgcc gcctgcctcc aggtggagtt ctccgtcctc gtagggatgg
     6001 gccagagcga catgctcgtc gagcaccacg ccgagacccg gttcggtcga tgggatgacc
     6061 atcccgtcct cccagcggat gggtgtctcc agcaggtcgg cgtggaagcc gtcgaagcgg
     6121 tcgatcgact cgaggaccaa gaagttgggg gtgcaggcgg ccagtgcgat gttggcggcc
     6181 gccacgaccg gtccgcagta acagtggggg gccagcaacg cctggtggac ctcggcgatc
     6241 gccgcgatct tcttgccctg gaggatcccc ccgctgcgac ccaggtcggg ttgcaggatc
     6301 gatgccgcgc cggcccggag caccgccgcg aactccgaca cggtggttag acgttcgccg
     6361 gtggccaccg ggatggtggt gcctgccgcc acccgggcca tgccctcgag atcgtcggtc
     6421 gggaccggct cctcgaacca gagcgggtcg taggcctcga ggcgtcgggc caaccggagg
     6481 gcgccggacg gagtgaactg gccgtgggtg ccgaatagga ggtcagcccg gttaccgacc
     6541 gcctcgcgga cggcccgcgt gtaacgctcc gaaaggtcga ggcgttcgag cgacggctgg
     6601 cggccgtcaa acaccgcgta ggggccggct gggtcgaact tgaccgcggt gaacccctgg
     6661 tcgacggccc ggaccgctgc ctcggcggcc aggtcgggat tggagtagag gttcggcccg
     6721 tcgagcgggt cgtaggcgtc cccgtcatcg ggatacaggt aggtgtagga gcgcaggcct
     6781 tcgtggaccc gcccacccag gaggtcgtac accggccgcc ccgtggcctt gccgatgatg
     6841 tcccagcacg ccatctccag cgcgctgatg attccgcaca gagtggggtc gggccgcagg
     6901 gcgtagccgc tgccgtaggc ccgacgccag aatgactcca cgtcgaacgg acggtgaccc
     6961 accaggtgac ggtcggccac gtcgacgatc atctcggcca ccaggtgcgg gccgacggtg
     7021 gccacgtagg cctcgccgat gccctcgatc ccgtcgtcgg tggtcagctt cacgaagatg
     7081 aagtagcggc caccgtgtcg gggtggcggg ttgccgacca cgaaggtctc gacgtcgcgg
     7141 atcagcatgc tgcgggcccc cctgctgccg tcgaagtagc agcggtcgtt ggatttccgg
     7201 tgaccgtccc gttcgggagc accacggttc gtacaacgtc gccccgccag acctcgtcaa
     7261 atgcatcctg gatgtcgtcc aacgtgtggg tgctggagac catgccggct aggtcaaggc
     7321 gcccggctcg atggtggtca acgagcgccg ggacgtcgac ggccacccgg gcagtgccca
     7381 tcttcgaacc gaggatcgac ttgttggcgg cggccagcca gctgggagcc acgtcgatgg
     7441 tgacgtcgtc gccggccatg cccacgatga ccagttggcc catgggggcc aacaggtcga
     7501 tggcgccgtc gagggctgcc ggcgcaccgg tggtgaccag cacgtggtcg gccaggtggc
     7561 cacccgtcgc ctcggtgatg acggcagcca aatgtccgcc ggggtggccg ctacctgtcg
     7621 agccgccggt cgggtcagca gtcggatctg cggtgtgggt ggcgccgaaa cccagtgcgg
     7681 cgtcacgctt gtcgatcgct gggtccacgg ccacaatcgg gtgggcgccg gcgagacggg
     7741 ctgcctggat ggcgccgata cccacacctc cacagcccac cacgaccacc gtgtcgccgg
     7801 cggccacccg ggccgtgttg gtaaccgccc ccgaaccggt aagcacgcca caacccagta
     7861 gcgaggcggc caccaggtcg acgtcagcgg gcaggggcac gacctgagag cggtcgacga
     7921 ctacttgggt ggcgaatcca cccacggcca ggccctgaat gaggggtgca ccgccggcat
     7981 cggtcagcgg gctggtggcg ttaagggcga tgtcgcccgt gcaggccacg tcgtgacccc
     8041 ggaggcaggc ccggcagtca ccgcaggttc ggatgagcga gatgaccacc gggtcgccga
     8101 cggagagatc ggtcaactcg tcgtccgcct ccggctcgac cccgatttcg agaatgcgcc
     8161 cggtggcctc gtggcccagc acgagtggga attcggtgac ccacgtgccg tcgaggcagc
     8221 tcaggtcgga ggggcagacg gcgcaggccg cgacctccac ccggacctcg ccgggacctg
     8281 gggcggccag atggacgttc tcgatttcgg tcgggatgcc aacgcctcgg ctcaccgccg
     8341 cacggatggt gatcccccgg cccgtcgaca cggcgcggaa cctacacccg ggacgggctt
     8401 ctggacagac gttccgcccc gccgccgagg gggtcggtcg tcccagtaaa gcgccgggca
     8461 tcctgattgt gagacatgtt cagccgagca ggatttcggc cacctgggcc agatgaccgg
     8521 ccgatcgggg ggccacgtta agcatggtca ccgggctctc ctcgaaggct gccaggcggt
     8581 cacggatgcg ctccggggtg ccgatcagcg agatttcgtc tgcaaaccgg tcgggcacag
     8641 cggcaatggc ttcgtcccgt cgaccctcaa ggaacaggtc ctggatacgg tcggcttcgg
     8701 tggcgaatcc cattcgggcc atcaacttcg tgtggaagtt ctgccccttg gcgcccatgc
     8761 ctcccacgta gaagcccagc atggccttca ccggggccag cgccgaggcg atggcgtcag
     8821 ttgaatcatc ctcggtgacg gtgaccgcga ggttcaacgc cacctcgaag tgggccgggg
     8881 ctccgaccaa ctggtcggcg tacacctcag gtcggtaggg cgagtagtac agcggcagcc
     8941 agccgtcggc gatctcggcc gtctgggtca cgttcttcgg accttcggcg ccgatgaaga
     9001 tggggatgtc ggcccgcagg ggatggacca ttaccttcag gggcttaccc aaccccgtcg
     9061 aaccttcgcc tacgtagggg tgctggtgaa agtcgccgtc aaaggacagg tgatcgtcgc
     9121 gccggaaggc ctgccgtagg atctcgacgt actcgcgggt gcgggccagc gggcggttgg
     9181 acggttggcc gtaccaaccc tcgacgacct gggggcccga cacgccgagg cccaggatga
     9241 gccggccgtt cgagagatgg tcaagggtga cggcgtgcat ggccgtggcc gtgggcgtgc
     9301 gggccgacat ctggacgatg ccggtgccca gacgaatgcg ttcggtgtgg gcggccaacc
     9361 agacgagcgg tgagaaggcg tcgctgcccc acgactcagc ggtccacgcg gcgtcgtagc
     9421 cgaggcgctc ggcctcctgg acaaggtcca cgagatcagc cgggggttgt gccccccagt
     9481 agccgaggct gaggcctagt tgcatggaga gaccggtcgc atgaagagat cgtcccagcg
     9541 gtcaagccct ggcgccaatg caggcaacta atcggaagcg ggcagaagcg ggcatcgccc
     9601 ggtgtcggcc ctagtgtccg aacgtgatcg aagccaccga gacgttccca cgccagcatg
     9661 cacggacccg gcgcttcacc tgtggggtac cgcgtgacat ccgggtggcc gatgacggat
     9721 cccgggtggt tttcctgcgt tcgttttcag gtgatgaccc gatcaacgcc ctctggtgga
     9781 tggacccagt aaccggcgag gagcgattga tcgccgatcc gggagcgctg tcccccggag
     9841 acattgccga tggcgagggg ccgtgcaagg gggccgacgg ggtgccggcg gccgagttgg
     9901 cccgccgcga gcgtgtccgt gaatctgggg gtgggatcgt ggcttacgac gggctgcccg
     9961 acctttcgcg gttgtgcttc gtgctcgacg gccgagtctt cctcgccgag gtacccaggc
    10021 atggagacac aggtgacgac caggggcccg tcgcccgggt ggttgagctc ccgtccagcg
    10081 gaggtgcctt cgatccacga ctcagcccag atggcacggc ggtggcctac gtgtcgggtg
    10141 catccgtccg gacgacgggg cccggtggcg accgccgggt gatcggagga tccacgccga
    10201 ccgtgtcatg ggggtcggcc gagttcgtgg ccgccgagga gatgggtcgc aaccgtgggc
    10261 actggtggtc gcccgatggt cgacggatgt tgatctctag ggtagacacg gcaccggttg
    10321 ccgagtggtg gatctcgtcg ccgacggagc cggcgacgcc gccgcgggcc atccggtatc
    10381 cggctgccgg cacggtcaat gccacggtcg gcttagctct ggttgacctg gacgaagccg
    10441 ctcccactac cgagggggcc accggcagtt cgactatcga cgtggactgg agccagggcg
    10501 ccacgttcga gtacctggcc gacgtgcact ggccagtcga gggacgaccc ctgctggtcg
    10561 tccagacccg ggaccaacga acgctggccg tgctggaggt ggatccgtcc acgggtgccg
    10621 tcgaggaacg gcaccggacg accgatgagc actgggtcga cctggtcccg ggttcgccgt
    10681 tggtggccaa tggttccctc ttcaccgtgg agtccaggga cggggcctac cgcttggtcc
    10741 aggacgggat cgtcttgttt cccaactccc tcgacggggt acaggtgcga tccattgtcg
    10801 gcgctgacgg cgacggcgac ggcgaccggg ccggtgtcgt ggttcgcgcc tcggccgatc
    10861 ctatggacgt cgatgtccta cggattcccc tggatgatgg attggtcgaa acggtgtccg
    10921 gaggaggggg cctccgctcg gcggtggtcg gtggtggggt cacggtggtg acggtggcag
    10981 acctcgctgg ttcgactacc acggtccatc cgggcgggtt cgcgctgtcc tcccatgctg
    11041 agaagccggt ggtccagccg cgcccaacct tccacgtggt cggagaccgg tcgctgcgag
    11101 tcgcggtgct cctgcccgat ggtcacgacg gatcaccgct tccggttctg ctggatccat
    11161 acggcggacc gcatgctcaa cgggtacagc gggtgcgggg ccagtacctc acctcccagt
    11221 ggtttgccga ccggggcttt gccgtggtgg tggctgacgg gcgggggacg ccgggccgtg
    11281 gccccgcttg ggatcgtgcg gttcgtggca atctggccgc accggtactg gaggatcagg
    11341 ttgatgccct gcacgctgtg gccaccaccg acgatcgact ggacctaggg cgggtggcta
    11401 tccggggctg gtcgtttggt ggctacctgg cggcactggc cgtgctacgc cggcccgacg
    11461 tgttccacgc cgcggtggct ggcgcgccgg tcgccgactg gcgcctctac gacacccact
    11521 acaccgagcg ttatctaggt catccagacg tggagcccga gaactacctg cggagtggat
    11581 tgtgctccgc cgaggattgg gcgccccgtg gggtcgacgt gccggatcgc ccgctgctac
    11641 tggttcatgg gttggccgac gacaacgtgg tggtcgccca caccctcgcc ctgtcgcggg
    11701 ccctactgga ggccggacgg ccccatcagg tcctgccgtt gtcgggcgtc acccacatga
    11761 ccccccaggt cgaggtggcc gaaaatctgc tattggtgca gttggtgttc ctgcagaagt
    11821 ctctggggtt ggcgcccctg atctagtagt gccggtccag gtggttctgt ttcaggcgag
    11881 ccgcgtcaga cggccgtcca gccgccatcg acggccagga tgtgtccggt gaggtaggag
    11941 ccggcgtccg aggccaggag tagcagggcg ccgtccagtt cgtgagccag cccgccccga
    12001 cccatcggcg tgcccgactc gacgtaactc cgacccgcgt tggtgtggaa catgtcgtcg
    12061 gagttcatct cggtctcgaa ccatgctggg gccagtgcgt tgacccggat gccctttcga
    12121 gcccactgca cggccagctc acgggtcagg ttgtggaggc ctcccttggc cgcggcgtat
    12181 ccgggtacgc ggaggcgacc gccggatacc tgacccagaa ccgaacccac gttgaccacc
    12241 acgcctgggt gattctcgga gatccaccac cgggcggccc gcctggccag ttcgtagggg
    12301 gccaccaggt cgacagcgag ctcgtggcgg aagccgtcca gatcgtcgtc gacggccggg
    12361 acgacccttg agatgccagc gttgttcacc agtacgtcga tccgaccgaa gtggtcgatg
    12421 gcggagttga tgatgtgctc cggtccgtcg tcggccgcca cgtccacgct gacggcgagc
    12481 gcatcgggaa gctcgtcggc cagggcctgg atgcgttcag tgcgccgggc ggccagcacg
    12541 agcctggccc ccacgtcgga caacacccgg gcgaaccgtt cgccaaggcc cgagctggcg
    12601 ccggtgacca ccacgacccg cccgtccagg cggaaccgtt ggagtacccc gtctggggtc
    12661 tgtccggagg tgctgtccac ggaccggacc ctagagcggt ggggctccgg cgatctgacc
    12721 ggcggtgagc tccagcactc gatcggccag gtcggctgct tcagtcggat cgtgggtgac
    12781 taacagggtg gctggtcgtt ggtcccgatc gcccagcagc gcgtggatct gccgccgaga
    12841 cccagcatcg agcgccgtgg acggttcgtc gagcaggagc aggtctggat cagtagccag
    12901 ggcgcgggcc accgctaccc gctgggcctg gccgccggaa cactcgttgg gccgacgatc
    12961 taccagatcc tgcaggtgga gcaatgccag gagggaatcc acccggtcgg gggtggagtg
    13021 ggggctaaac cctacgttgg cggccaccgt caggtgttca aagagcaggc ggtcctgggg
    13081 cacccaaccg atccgccgaa aatgagcagg tacgaagccc cggtctgagc cgtcgtcgac
    13141 ggttctccga ccgaggtcca gccgtccgtc gttgaggcgg actagtccgg ccagcagccg
    13201 caggagcgtg gtcttgcccg ccccgttggg gccgactacg gccaccagct cgccgggcag
    13261 cacgtcgagg gccacccgga gggtcaggtc gccgacggtg gcggtgccgt ccagcttcag
    13321 taccggttca ggggaggatt cccgatctag tcccgcatct ggttccgggc tgggtggcat
    13381 cgcgctcatc gtgtggggag ccaacggtgg cgtgtgggga gcagaacggc cagcgacacg
    13441 gccaacagca cgaggctgag ggcgacggcg gcctccgggt cggattcgag cgcctggaag
    13501 gtggccaggg gcagggttcg ggtccgtccc ggcaggttgc cggcgaacgt gatggtggct
    13561 ccaaactcgc caagggcccg ggcccatgcc agcgccaggc cggcgcccat ggccgggatt
    13621 agtcggggca cggtgatgcg tcggagaacg gtcagcgggt cggcgcccag cgttgccgcg
    13681 acctgttcga gatcctcgcc ggaggtacgc agcgccccct caacggtgat cacgtagaag
    13741 gggagggcta cgaaggtggc ggccaccacg gcaccggccg tggtgaatgg cagcgtcacg
    13801 tcgaaccacc gttccagcca ctggccaacc aggccgcggc gacccaaggc gaacagtaga
    13861 gcagtaccac caacgaccgg cggcagcacc atgggcagga ccacgagtgt ccggacgagc
    13921 cgccggaagg gcacggcgac ccgggcaagg acccaggcca tcggtgttcc cagcacgagg
    13981 acgatgccgg cggccgtcag gctgacgagg agcgacaccc cgagggcctc gaccacctcg
    14041 cgccgtcgga gaaggttgac cagaccggac cacggtgccc gctgcagcag cgctagcact
    14101 gggagggtga ggaaggccat agccaacgcg gcgaccacca gcaccgaccg gggagcgttc
    14161 ggcggtcggg tcatcgagtt ggccccgtga cgaatccgtg ctcggtgagg atctttcggg
    14221 cctggtcgct ggtaaggaac gtcacgaacg gatttccgga cagcgacagg ctggcggccg
    14281 cgtaggtgat gcagggacag gtcggtttct gaggccatgc tggggccagc cccgcatgag
    14341 ccgacacgtc ggtggcgtag acgatgccga ggtccgcctc gtcgagggcc agtcgggcga
    14401 ccacggcccg tgcgctgggt tcgaacgagt cgacgggaag gtcgccgaag cgggctgccg
    14461 cagcatcgcc gcatgggacc ccggcggcgc aggccaccag caccagtgac gggtcgcgca
    14521 ggtcggccgg tcgacgttcc ggtccggttg tgggtcgggc caccacgaga tggttgatgg
    14581 ccagatcgtg gatagcggtc ggcacgtggt ccgccacctg atctgtcgcc tggttgagga
    14641 gaagccggcg ctgaaggtca tcgaacagat cggcgtcggc ggtcaggaac gcgtcggcgg
    14701 gcgcgccgtc acggacctgg gcggctagat ggttggatcc gcctgccacc aactccacga
    14761 ccactcccga tgtcgaggcc cactcgtcgg ccaggtccgc ggctacgtcg gtcaacgacg
    14821 aggccacgaa tacggtcagt gccgtgtcgc ccggagactc ggtgcacccc gtggcaccca
    14881 gccaggccac gacggccaac aggatcgccc tggaggacag gtgggtccac atcgtcagtt
    14941 gagaaggtgc ctgtgtccgg tcagcggggg cgttcgacga ccacgttggt ggccttgacg
    15001 gcagccacag ccagaacgcc gggctccagg cccagctcgt cgacagcttc ggctgagagc
    15061 agcgacacca cgcggtgggg accggcttga atctccacct gggccatgac cccatctcgg
    15121 accacccgtg tcaccaagcc ggtg
//
LOCUS       DASCMR010000092         2905 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000481670, whole genome shotgun sequence.
ACCESSION   DASCMR010000092 DASCMR010000000
VERSION     DASCMR010000092.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2905)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2905)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2905
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000481670"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..898)
                     /locus_tag="QGG16_02410"
     CDS             complement(<1..898)
                     /locus_tag="QGG16_02410"
                     /inference="COORDINATES: protein motif:HMM:NF013741.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HJP24159.1"
                     /translation="MSTSTGLMAIAALLIINAFFVAAEFSLVAVDRARIEAAATDGDP
                     GARRVRALLHRLTSHLSGAQFGITLSALLLGFVAEPTVARILTGDDHPTGASVVVAIL
                     VATCLHLVVGEQVPKYLALAAPEPLARGLAPAVTVIGVIGRPLVAVLDGAANAVVRRL
                     GVIPRTDLDPSRTLDEIGDLIRTSADETLDPDDVALLTRSVRLADKVAAEVLVPRLDV
                     HSLDVSAVGADLLAEAERTGCSRFPVIDGDLDHVVGIVHVKALLTIARDSRDRVPVAE
                     LMAPALAVPETRALDGLMDDFRA"
     gene            978..1451
                     /locus_tag="QGG16_02415"
     CDS             978..1451
                     /locus_tag="QGG16_02415"
                     /inference="COORDINATES: protein motif:HMM:NF024212.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HJP24160.1"
                     /translation="MTNPPDDSPPAKEGHPTREVDAARAAAKLARQITIPLTEHQLSL
                     SQYRVLVFLDEGGAAPSDLADRLSVSRPSITALMDGLGERDLVERHDDPDDGRRVVHH
                     LTESGRRILEIADRAVADRLMALGAHVNAGDPTPLIENLSKFGDAIRAARAAGTA"
     gene            1456..>2905
                     /locus_tag="QGG16_02420"
     CDS             1456..>2905
                     /locus_tag="QGG16_02420"
                     /inference="COORDINATES: protein motif:HMM:NF012869.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJP24161.1"
                     /translation="MGAKKATPQIDPDTSKGWFRRLLPMIVARRAAFTVVLVTGLVGL
                     ALQVSVPMVLRQAVDRSLGGLDGSAAFADLERHAILLVVMATASFGLRFTYRYLLFGT
                     ACRIETDLRDTVYQHLTRLSFSFYDRVAAGEVISRANSDIRSIQLLLAFGPLAGLSAV
                     SFLMAFGFMLSIHVPLTLVTVSTMPFVFVLGQKLRDRVFPLSWVTQGRMAEVAMVVDE
                     NVNGTRVVKSFAAEFDQIALLARAADRLRWSATALIEARARFNPMIEALPRLGMALVL
                     LYGGHLAIDGQVGVGSLLAFSGYVTMIAMPFRMFGFVLIQAQRAAASSMRIYEILDEE
                     PAIVDRPGAREPATASPELGRVEFRSVVFSYPTADPEHEGDPRPVLDGFDLVIEPGET
                     VAIVGRTGCGKSTVARLLPRFYDVTSGAVLVDGIDVRDRRLDGLRHTVSQVPDESFLF
                     SERLHDNVAFGRPDASRPDVEAAAHVARADEFI"
BASE COUNT          480 a         1056 c          887 g          482 t
ORIGIN      
        1 ctgcccggaa gtcgtccatg aggccatcga gcgcccgggt ctccgggaca gccagcgccg
       61 gtgccatcag ttcggcgacc ggcacccgat ctcgcgagtc gcgggcaatg gtcaacagcg
      121 ccttcacgtg gacgatgccc accacatggt cgagatcgcc gtcgatcacc gggaacctgg
      181 aacagcccgt tcgttccgcc tcggccaaca ggtcggcgcc caccgctgag acgtccagcg
      241 agtggacgtc gagtcgcggc acaagtactt cggcggccac cttgtcggcc agccgaaccg
      301 agcgcgtcag caaggccacg tcgtcgggat ccagcgtctc gtcggccgag gttcggatca
      361 ggtccccgat ttcgtcgagc gtccgcgacg ggtcgaggtc ggtccgcggg atcactccca
      421 ggcgacgtac cacggcgttg gcggctccgt cgagcaccgc caccaacggg cgaccaatca
      481 caccgatcac cgtcaccgcg ggagccaagc cgcgagcgag gggctcgggc gcagccaagg
      541 ccaggtattt gggcacctgt tcgcccacca cgaggtgtag acaagtcgcc acgagaatgg
      601 ccaccaccac cgacgccccg gtcgggtggt catcgccggt caagatgcgc gccaccgttg
      661 gctcggccac gaaccccagt agcagcgctg acagggtgat cccgaactgg gctccggaaa
      721 gatgcgaagt caagcggtgc aggagagcac ggacccgccg ggcccccggg tcgccgtcag
      781 tggcagccgc ctcgattcgg gcccggtcca cggccaccag gctgaactcg gccgccacga
      841 agaacgcgtt gatgatcaac agcgcggcga tagccatcaa acccgtggag gtggacatct
      901 ggtctaaggc taccgatgcc cgtcaaccgg taacggccga tgcgagccct cagaaatagt
      961 tcgatacgtt aaccatcatg accaaccctc ctgacgactc gcctcccgcc aaggaggggc
     1021 atcccaccag ggaggtcgac gccgcccggg ccgcagccaa gctggcccgc cagatcacca
     1081 ttcccctgac cgaacaccag ctcagcctct cccagtaccg ggtcctcgtc ttccttgacg
     1141 agggcggcgc cgcgccctcc gacttggccg accggctctc ggtcagccgc ccgtcgatca
     1201 ccgcactgat ggacgggcta ggagagcggg acctcgtcga gcgccacgac gaccccgacg
     1261 acggacgacg ggttgtccac cacctgaccg aaagcggccg acggatcctc gagatcgccg
     1321 accgtgcggt ggccgaccgc ctcatggcgc tcggagcaca cgtgaacgcc ggcgacccca
     1381 cgccgcttat cgagaacctc agtaagttcg gcgacgccat ccgtgctgcc cgtgccgccg
     1441 gcaccgcctg acctgatggg agcgaagaag gcgacgcccc agatcgatcc cgacacctct
     1501 aagggctggt tccgtcggct cctcccgatg atcgtcgccc gacgggccgc cttcaccgtt
     1561 gtcctggtta ccggacttgt gggcctcgcc ctccaggtct ctgtccctat ggtcctgcgg
     1621 caggccgtcg accggtcact aggcggcctc gacggttccg cggccttcgc cgacctggag
     1681 cgccacgcca tcctcctggt cgtcatggct accgcgtcgt ttgggctccg gttcacctac
     1741 cgatacctcc tctttggcac ggcatgtcgg atcgaaaccg acctgcggga caccgtctac
     1801 cagcacctaa cccggctctc gttctccttc tacgaccggg tggcggctgg tgaggtgatc
     1861 tcccgagcca actccgacat ccgctccatt caactcctgc tggccttcgg tccgctggcc
     1921 ggcctctcgg cagtcagctt tctcatggcc ttcggattca tgctcagcat ccacgtacca
     1981 ctcacgttgg tcaccgtctc caccatgccg ttcgtcttcg tactaggcca gaaactccgc
     2041 gaccgggtct ttcccctgtc gtgggtcacc cagggtcgta tggccgaagt ggccatggtg
     2101 gtcgacgaga acgtcaacgg gacccgggtc gtcaagtcgt ttgccgccga attcgaccag
     2161 atcgccctat tggcacgggc cgccgaccgt ctccgctggt cggccaccgc cctgattgaa
     2221 gcccgcgccc gattcaatcc aatgattgaa gccctccccc gcctcggcat ggccctcgtg
     2281 ctgctctacg gcggccacct ggccatcgac ggtcaggtgg gggtcggctc actcctggcc
     2341 ttcagcggat acgtgaccat gatcgccatg ccgttccgaa tgttcggctt cgtcctcatc
     2401 caggcacaac gggcggccgc ctcgtcgatg cggatctacg agatcctcga cgaggagccg
     2461 gccatcgtcg accgacccgg cgcccgtgag ccggcaacgg cttcccccga actgggtcgg
     2521 gtggagttcc gctctgtggt gttctcctat cccacggccg acccggaaca cgagggagac
     2581 ccccgcccgg tcctagacgg cttcgacctg gtgattgagc ccggcgagac ggtggccatc
     2641 gtcggtagga cgggctgcgg gaagtcgacg gtggcccgac tcctcccccg cttctacgac
     2701 gtgacctccg gtgcggtgct cgtcgacggc attgacgtcc gtgaccgccg actggacggg
     2761 ctgcgccaca cagtgagcca ggtgcccgac gagtcgttcc tgttctccga gcgactccac
     2821 gacaacgtgg ccttcggtcg acccgatgcc tcccgcccgg acgttgaggc ggcggctcac
     2881 gtcgcccggg ccgacgagtt catcg
//
LOCUS       DASCMR010000093         2114 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000486804, whole genome shotgun sequence.
ACCESSION   DASCMR010000093 DASCMR010000000
VERSION     DASCMR010000093.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2114)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2114)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2114
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000486804"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1494)
                     /gene="aceK"
                     /locus_tag="QGG16_02425"
     CDS             complement(<1..1494)
                     /gene="aceK"
                     /locus_tag="QGG16_02425"
                     /EC_number="2.7.11.5"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF002804.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008772 - [isocitrate dehydrogenase
                     (NADP+)] kinase activity [Evidence IEA];
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA];
                     GO_process: GO:0006006 - glucose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional isocitrate dehydrogenase
                     kinase/phosphatase"
                     /protein_id="HJP24162.1"
                     /translation="MSDHQNSERDDDRIGHQIADTILAGFVDYIAGFRKVSRRAGAHF
                     TDRNWSAGGDDADRRLLMHRATVVTTVDRVRPLVDGVADRRGIWRSGRSHYKERIADR
                     SDFGLAETFFNSVTRRIFTTIGVDNDVELRWFGATTISRGEGRAELFTTATRVRDTAA
                     MVREILEAAAFDAPWADIDGDSRRVAARIDSFLLDEWDSLLADGIDMLRPVFYRNKGA
                     YLVGRLRQLNRVTPIVIPVVHGDDGLRVDTVLVTESHASRLFSFTRSHFFVEWPNPSE
                     LVGFLKSLLPMKSLAELYTAIGFPQHGKTSLYRSLYRHLDHSHDKFVRTRGTPGMVMA
                     VFTLVSFNVVFKIIKDRFDHPKNTTRDAVKSRYDLVYNHDRVGRMVEAWEFENLSFEK
                     DRFDPDLLEELLATAAESVRVVGDQVVIRHVYSERQVYPLNLYLREMSTDKAVAAAID
                     WGWSIKDLAVANVFPGDLFTKNFGVTRHGNVVFYDYDELVLLEECRFR"
     gene            complement(1491..2069)
                     /locus_tag="QGG16_02430"
     CDS             complement(1491..2069)
                     /locus_tag="QGG16_02430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HJP24163.1"
                     /translation="MSSLVGGSTNDGPLARLIAEADIRQLVARYAVATDQRDLDALVA
                     LFVPDVLVGRDPSGEPVRGIEALRENLAGQLGAIGVTILHVGTHQIDLQGDDDATGHV
                     YCRAEIQDGDRWIHQTIRYDDRYRRVDGQWLFVGRKHQLFYGAEVGANPVGLPPANWP
                     TNHDGWGTLPEADPTWQAFWEERQAHGDEPSA"
BASE COUNT          371 a          649 c          707 g          387 t
ORIGIN      
        1 ccggaagcgg cactcttcaa gcagcaccag ttcgtcgtag tcgtaaaaca cgacgttgcc
       61 atgacgggtc acgccaaagt tcttggtgaa gaggtcgccg gggaacacgt tggcgactgc
      121 cagatccttg atggaccaac cccagtcgat ggccgcggct accgccttgt cagtcgacat
      181 ctctcgcagg tacaagttca gcgggtacac ctgccgttcc gagtagacgt gtcggatcac
      241 cacctggtcg ccgactaccc ggaccgactc ggccgccgtt gccaggagct cctcgagcag
      301 gtcaggatcg aagcggtctt tctcgaacga caggttctca aactcccatg cttcgaccat
      361 acggcccacc cggtcatggt tgtagacgag gtcgtagcga ctcttgacgg cgtcccgggt
      421 ggtgttcttc gggtggtcga accggtcctt gatgatcttg aagacaacgt tgaacgagac
      481 cagggtaaag acggccatga ccattcccgg ggtgccgcgg gtgcggacga acttgtcgtg
      541 ggagtggtca agatgccggt acagcgaacg gtagagactg gtcttgccgt gctgaggaaa
      601 gccgatcgcc gtgtacagct cggctagtga cttcatgggc agcagtgact tgaggaagcc
      661 gaccagttca gacgggttgg gccactccac aaagaagtgc gaccgggtga agctgaacag
      721 acggctggcg tgggactcgg tgaccaggac cgtgtcgacc cgcaggccgt cgtcgccgtg
      781 caccacaggg atgacaatgg gtgtcactcg gtttagttgt cggagacgtc ccaccaggta
      841 ggcgcccttg ttgcggtaaa agacgggtcg gagcatgtcg atgccgtcgg ctaacaggct
      901 gtcccactca tcgaggagaa acgagtcgat gcgggccgct actcggcggg agtcaccgtc
      961 gatgtcggcc cacggggcgt cgaaggccgc cgcttcgagg atctcgcgga ccatggccgc
     1021 ggtgtcgcgc acccgggtgg ccgtggtgaa caactcggcc cggccttcgc cccgcgagat
     1081 ggtggtggcg ccgaaccatc ggagttcgac gtcgttgtcg actccgatgg tggtaaagat
     1141 ccggcgggtc actgagttga agaatgtttc ggccagaccg aaatcgctgc ggtcggcgat
     1201 ccgctccttg tagtggctgc gtccggaccg ccagattcca cgccggtcgg ccacaccgtc
     1261 gaccaacggg cggacccggt ccacagtggt caccacggtg gcccggtgca tgaggagtcg
     1321 ccggtcggcg tcgtcgccgc cggcgctcca gtttcgatcc gtgaagtgcg cgccggctcg
     1381 acgtgacacc ttccggaagc cggcgatgta gtcgacaaag ccggccagga tggtgtcggc
     1441 gatctggtga ccgattcgat cgtcgtctcg ctcggagttc tggtggtcgc tcacgctgac
     1501 ggttcgtccc cgtgcgcctg acgttcctcc cagaaggcct gccaggtcgg gtcggcttcg
     1561 ggcagggtgc cccagccgtc gtggttggtt ggccagttcg ccgggggcag gccaaccggg
     1621 ttggcgccaa cctcggcgcc gtagaacaac tggtgctttc ggcccacgaa cagccactgt
     1681 ccgtccaccc gccggtaccg gtcgtcgtag cggatcgtct ggtggatcca gcgatcaccg
     1741 tcctggatct ctgcccgaca gtagacgtgg ccggtggcgt cgtcgtcgcc ctgaagatca
     1801 atctggtggg tgcccacgtg gagaatggtc accccgatgg cgcccagctg gccggccaga
     1861 ttctcacgga gggcctcgat gcctcgtacc ggttcaccgg atgggtcgcg tcccaccagc
     1921 acgtcgggca cgaacagggc caccagagcg tcgagatcgc gctggtcggt agccaccgca
     1981 taacgggcga ccaattggcg gatatcggct tcggcgatca aacgggccag ggggccgtcg
     2041 ttcgtgctac cgcccacgag actgctcacg aggaatccgt gccttggagt cgtcgatcgg
     2101 cccatccgcc aggg
//
LOCUS       DASCMR010000094         5688 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000487241, whole genome shotgun sequence.
ACCESSION   DASCMR010000094 DASCMR010000000
VERSION     DASCMR010000094.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5688)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5688)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5688
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000487241"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..415)
                     /locus_tag="QGG16_02435"
     CDS             complement(<1..415)
                     /locus_tag="QGG16_02435"
                     /inference="COORDINATES: protein motif:HMM:NF013482.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase subunit D"
                     /protein_id="HJP24164.1"
                     /translation="MTVTEDRPSYKWVGTRPIRPDGYDKVVGKARFAADLNLPGQLHA
                     AILRSPHGHARILSIDTTAAEAMPGVKAVMTSADFPELDASNPERDVAENIMARGVGR
                     YVGHALAAVAATTKAEAAAAVAAIEVEHELLPVVLR"
     gene            complement(412..900)
                     /locus_tag="QGG16_02440"
     CDS             complement(412..900)
                     /locus_tag="QGG16_02440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017953226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HJP24165.1"
                     /translation="MKRSRTHVTCTVNGDEVDFLASDDTSLLDALRDELGLTGAKEGC
                     GTGDCGACSILVDGRVNCSCLMFAPEAEGSDIVTVEGIAQGDQLHPLQQTFLEGAALQ
                     CGICTPGFLVSAKALLDENPDPTETEIRYALAGNLCRCTGYDKIVRSVQEAAVQLRGA
                     TR"
     gene            complement(915..1802)
                     /locus_tag="QGG16_02445"
     CDS             complement(915..1802)
                     /locus_tag="QGG16_02445"
                     /inference="COORDINATES: protein motif:HMM:NF013134.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HJP24166.1"
                     /translation="MKGRQMRYAAPATVDEARTLLSDNPGSQVFAGATDLVPQIRAGR
                     PSPPMVVDLKRIDRLTAVIHEGGKWTIGAATPTADLTRNADFTAMFPGLSEAAGLIGS
                     DQIQNRSSLGGNLANASPAADSVPALIANAGQAVIASGDGTRTVPAADIATGPGLTSL
                     ADGEFIIEFTLDDPPAGTGDAYLRMIPRTEMDIAIAGAAVRLTIADGTVSDATVALGA
                     VAPTVVIVSDAEAALVGATLDGGRFDDATLDAVAAAASAACDPINDKRGTVAYRRQVV
                     GVLAKRAAIVAAERAQNGA"
     gene            complement(1915..2508)
                     /locus_tag="QGG16_02450"
     CDS             complement(1915..2508)
                     /locus_tag="QGG16_02450"
                     /inference="COORDINATES: protein motif:HMM:NF042734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta family hydrolase"
                     /protein_id="HJP24167.1"
                     /translation="MSRPVPVSPSVSGLFLTPGAGSDRNQAGLLALEKHLAPLPVERM
                     DFPYRKAGKHFPDRAPVLVEAVRDGVADMAGARGVDPSRLVLGGRSMGGRMCSMAVAE
                     GLPAAGLVLICYPLHPPTKPENLRVEHFGAIDVPCLFVSGDRDEFGSPAEFDAQLEAI
                     PGPVTVVRLAGKRHDLKGADEAVCDAVGDWLENLRRS"
     gene            2571..3548
                     /locus_tag="QGG16_02455"
     CDS             2571..3548
                     /locus_tag="QGG16_02455"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HJP24168.1"
                     /translation="MEHEVAVASMTGGMAPSPAPFAGSDRLHPDGRPRGAFRDSLRTV
                     PNARNALTVVGSVLFPVAVVVAAVAATHPASWVAAFLLMPIAQNRLFILHHEAAHRVL
                     FSGRRINYLVGINLIGWLTFGTGGHGYRIGHIHHHRDEFGPKEPDFGLYARYPITTAS
                     MRRKHRRDLTGVSAFRIVRPRFQRLRETRHRRLTYWFLAGQVLVLAAFWAAGHPWLYL
                     LLWVLPWATLYQGLNRIRAIAEHGGMTRSEDRRRTTHHVHQSLVARLVMVPFSVGYHL
                     AHHADMTVPYRNLPRLHEALVDDGYLGDLEWPTYRSLWKVLRSAEDAAA"
     gene            complement(3578..3865)
                     /locus_tag="QGG16_02460"
     CDS             complement(3578..3865)
                     /locus_tag="QGG16_02460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24169.1"
                     /translation="MRFIQIIESEGDAAQELADVQGYAEQAAGDETVTVERVTVCGDR
                     DRPGTVIVIAEFASAEAAKQNDEHEITQEGAANAPDDTSYRNLDVVGVVEM"
     gene            complement(3999..4820)
                     /locus_tag="QGG16_02465"
     CDS             complement(3999..4820)
                     /locus_tag="QGG16_02465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24170.1"
                     /translation="MGDRPEWHTSAMAWCFQCGNEYAPGVEDCVECGVALVSEPPADA
                     AEVGALDEDQLAYELHEWAGESRRILDQDLTAAGIAHAWQGATLVVRVADEETVDRAI
                     EDAEDAGGPAIEPGVETVAYEVDGWAADEQSAFSDLLVRLGVPHEFDAEGDLVVRAAD
                     EDAVEVALDAFEAEADDRPELEGLDANGLLSDVFVACDRLRRDARDLAGIEGLANLAP
                     VLVGHRPPFGIDGRMWNALGERTMGLVGLLGTGDPEPAEVSAVAGELAEVLRHLT"
     gene            4852..>5688
                     /gene="glpX"
                     /locus_tag="QGG16_02470"
     CDS             4852..>5688
                     /gene="glpX"
                     /locus_tag="QGG16_02470"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HJP24171.1"
                     /translation="MTEDAQVPDRNLALDLCRVTEAAALAASRWMGRGDKEGADGAAV
                     DAMRHVLDTVTMDGIVVIGEGEKDEAPMLYNGERIGNGQPPAADIAVDPIDGTTLTSL
                     GRANAIAVIAVSDRGTMFDPGPCVYMEKIAVGQQCADVIDITASPAENLRRIAEAKRE
                     DVRDLTAVILDRDRHNNLIDQVRAAGARIRLIPDGDVAGAISTAWPNSGADVLFGIGG
                     TPEGVISAAALKCMGGAIQGRLWPRNEDERTAAVEAGYDLDRVLGTDDLVAGDNCFFS
                     ATG"
BASE COUNT          908 a         1987 c         1824 g          969 t
ORIGIN      
        1 ccctcagcac caccggcagc aactcgtgtt cgacctcgat ggccgccacg gctgccgccg
       61 cttcggcctt ggtggtcgcg gccaccgcgg ccagcgcgtg gccgacgtac cgccccacgc
      121 cacgggccat gatgttctcc gccacgtcac gttcggggtt ggatgcgtcc agctctggaa
      181 agtcggcgct ggtcatcacg gccttcacgc cgggcatcgc ctcggccgcc gtggtgtcga
      241 tggaaaggat gcgggcatgg ccgtgaggcg atcgcaggat cgccgcatgc agctgtcccg
      301 ggaggttcag gtcggccgca aagcgggcct tccccaccac cttgtcgtat ccgtcgggtc
      361 tgatgggtcg ggtgccgacc cacttgtagc tcggacgatc ctctgtgacg gtcatcgagt
      421 tgctcccctc agctgcaccg cagcctcctg gacggatcgg acgattttgt cgtagcccgt
      481 gcaccggcag aggtttccgg ccagtgcgta gcggatctct gtctcggtgg gatccgggtt
      541 ctcgtcgagc agggctttgg ccgacacgag gaatccgggt gtacagatcc cgcattgcag
      601 ggccgcgccc tccaggaagg tctgctggag cgggtggagc tggtcaccct gcgctatgcc
      661 ctcgacggtc acgatgtcgg acccctcggc ttcgggggcg aacatcagac aggagcagtt
      721 gacccgaccg tcaacgagga tcgaacatgc cccgcagtcg ccggtgccac agccctcctt
      781 ggctccggtg aggccgagct cgtcgcgcag ggcgtcaagc agtgacgtgt catcgctagc
      841 taggaagtcg acctcgtcgc cgttgaccgt gcaggtcacg tgagttcttg acctcttcat
      901 ggaagacatg gttctcaggc tccgttctgt gcgcgttcag cggcgacgat tgcggcccgc
      961 ttggccagta ctccgaccac ctggcgccga taggcgacgg tgccccgttt gtcattgatg
     1021 ggatcgcagg ctgcggacgc tgcggcagcc accgcatcca gagttgcgtc gtcgaaccgg
     1081 ccaccatcca aggtggcacc gaccagagcg gcttcggcat cagacacgat gacgacggta
     1141 ggagcgacag cgccgagcgc aacggtggcg tcgctcactg tgccgtcggc aatggtgaga
     1201 cgtaccgcag ctccggcaat ggcgatgtcc atctcggtgc gcgggatcat ccggaggtag
     1261 gcgtcgccgg tgccggccgg ggggtcgtcc aaggtgaact cgatgatgaa ctcgccgtcg
     1321 gccagtgatg tgaggcccgg gccggtggcg atgtcggccg ctggcacggt ccgagttccg
     1381 tcgccggaag cgatgacggc ctgaccggca ttggcgatca gtgcgggcac cgagtcggcg
     1441 gcaggtgagg cgttggccag gttcccaccc aggctcgacc ggttctggat ctgatcggaa
     1501 ccgatcagac cggcggcttc cgacagcccc gggaacatgg cggtgaaatc ggcgttccgg
     1561 gtgagatcag cggtcggcgt cgccgcgccg atcgtccact ttccaccttc gtggatcacc
     1621 gcggtcagtc gatcgattcg cttgaggtcg accaccatgg gcggcgacgg gcgtccggct
     1681 cggatctggg gaacgaggtc ggtagcgccg gcaaagacct gcgagccggg attatccgac
     1741 aacagcgtcc gggcttcatc aaccgtcgcc ggagcggcgt atctcatctg gcgtcccttc
     1801 atcagcgcgt ccctctggac gcgctatcta tcggacctat tttctagttc ggcgctgatg
     1861 attccctcaa ctcctacgca aatgattcga tcaactcctg cgcaaataat tcgatcaact
     1921 cctgcgcaaa ttctccagcc agtcgcccac ggcgtcgcac acagcttcgt cggcgccctt
     1981 caggtcatga cgtttgccag ccagacgcac cacggtgacc gggccgggaa tggcttccag
     2041 ttgggcatcg aattcagcgg gcgacccgaa ctcgtcgcgg tcaccggaga cgaagaggca
     2101 cggcacatca atggcgccga agtgctcgac tctgaggttc tccggcttcg ttggcgggtg
     2161 gagcgggtag cagatgagca ccagaccggc tgctgggagc ccctcagcga ccgccatcga
     2221 acacatccgt ccccccatgc tgcgaccgcc cagcacgagg cgggacggat cgaccccacg
     2281 agcaccggcc atgtcggcca caccatcgcg tacggcctcc accagcaccg gcgcccggtc
     2341 gggaaagtgc tttccagcct tccggtatgg aaagtccatg cgctcgacag ggagcggagc
     2401 caggtgtttc tccagggcga gcaggccggc ctggttgcgg tcactgccag caccgggggt
     2461 caggaacaat ccggagaccg acggggagac cggcacgggg cgagacaccg gctgagggta
     2521 gccgggtcgc tgatccgacc ccggcgggca ccgatctgta cgctcatctc atggaacatg
     2581 aggtggccgt agcgtcgatg accgggggaa tggcgccctc gccggctccg tttgctggca
     2641 gcgaccggct ccatcccgat ggtcgcccga ggggggcgtt ccgggactcg ctgcgcaccg
     2701 tgcccaatgc ccgcaacgcc ctgaccgtgg tcggctccgt gctcttcccg gtggccgtgg
     2761 tggtcgccgc cgtggctgcc acccaccctg cctcgtgggt ggcggcattt ctgctcatgc
     2821 ccattgccca gaaccgattg ttcatcctcc accacgaggc cgcccaccgg gtgctgttct
     2881 ccggacgtcg aatcaattac ctggtcggca tcaacctcat tggctggctg accttcggca
     2941 ccggcggcca cggctatcgg atcggccaca tccaccacca tcgagacgag ttcggcccga
     3001 aggagcccga tttcgggctc tacgcccggt atccgatcac cacggcgtcg atgcggcgca
     3061 agcaccgtcg ggacctgacc ggcgtctcgg cctttcggat cgtgcggccc cggttccaac
     3121 ggctccgcga gacacgtcac cggcgactca cctactggtt cttggccggg caggtcttgg
     3181 tgctggccgc cttctgggcc gccggccatc cgtggctgta cctgctgctt tgggtgctcc
     3241 cgtgggccac cctctaccag ggcctgaacc ggatccgggc tattgctgaa cacggcggca
     3301 tgacccgttc ggaagatcgt cggcgcacca cccaccacgt gcaccagtca ctggtggccc
     3361 gcctggtgat ggtgccgttc agcgtgggct accacttggc ccaccacgcc gatatgacgg
     3421 tgccgtaccg caacctcccc cgtctgcacg aggcactggt ggacgacggc tacttgggcg
     3481 atctggagtg gccgacctac cgctcgctat ggaaggtgtt gcggtcagcc gaagacgccg
     3541 ccgcctgatc tcggtggccc ctaccggggc cgccaactca catctcgacg acgccgacca
     3601 cgtccagatt ccggtaggag gtgtcgtcgg gggcgttggc cgctccctcc tgggtgatct
     3661 cgtgctcgtc gttctgcttg gcggcctcgg ccgaggcgaa ctcggcgatc acgatgacgg
     3721 tccccggccg gtctcgatcg ccgcacacgg tgacccgctc gaccgtcacg gtctcgtcgc
     3781 cggccgcctg ctccgcatag ccctgcacat cggccaactc ctgggccgcg tctccctcgg
     3841 actcgatgat ctggatgaat cgcatggcta ccgctctctc gtcgcaccgg tcgggtcggt
     3901 cccgaccggg ggatgaggat cccccacaga tggggtcgac gcaaccggtc ggaaaccgac
     3961 cacttcggtc gactcccgct gaccccagcg acgagcacct aggtcaggtg gcggagcacc
     4021 tcggccagct cgccggccac agctgacacc tctgcgggct ccgggtctcc ggtgccgagc
     4081 aacccgacca gccccatggt gcgttcgccc agggcgttcc acatccgtcc gtcgatcccg
     4141 aacggcgggc gatgacccac caacacaggg gccaggttgg ccagcccctc gatcccggcc
     4201 aggtcccggg catcgcgtcg caggcggtca caggccacga acacgtcgct gagcaggccg
     4261 ttggcatcca acccctcaag ctcgggccgg tcgtcggcct cggcctcgaa cgcgtccaaa
     4321 gcgacctcca cggcgtcctc gtcggcggcc cgcaccacca ggtcgccctc agcgtcgaac
     4381 tcgtgcggca cgcccaggcg caccagcaga tcactgaacg ccgactgttc gtcggcagcc
     4441 cagccgtcca cctcgtaggc caccgtctcc actccgggct cgatagccgg acctcctgcg
     4501 tcctcggcat cctcgatggc ccggtcgacg gtctcctcgt cagcgacccg caccaccaag
     4561 gtggccccct gccaagcgtg ggcaataccg gcggcggtca agtcctgatc taggattctc
     4621 cggctctcgc cggcccactc gtgaagctcg taggccagct ggtcttcgtc gagtgcaccg
     4681 acctcggccg cgtcggccgg cggttcagac accagggcca caccgcactc gacacagtcc
     4741 tcgaccccgg gcgcgtactc gtttccgcat tggaagcacc aggccatggc ggaagtgtgc
     4801 cactccggcc ggtctcccac gtcccccgcg gcaagggtag gttcccgacc tatgaccgaa
     4861 gacgctcagg tacccgaccg caacctcgcc ctcgacctct gccgggttac cgaagccgcc
     4921 gccctggccg cctcacgctg gatgggccgc ggcgacaagg agggcgccga cggcgcggcg
     4981 gtcgacgcca tgcgtcacgt ccttgacacc gtcaccatgg acggcatcgt ggttatcggt
     5041 gagggcgaga aggacgaagc cccaatgctc tacaacggtg agcggatcgg taacggccag
     5101 ccgccggctg ccgacatcgc cgtcgacccc atcgatggca ccacgctgac ctcgctgggc
     5161 cgagccaacg ccatcgcggt cattgcggtc agcgaccggg gcaccatgtt cgaccccggg
     5221 ccgtgcgtct acatggagaa gatcgctgtc gggcagcaat gcgccgacgt catagacatc
     5281 actgcctcac ctgccgagaa cctgcggcgc atcgccgagg ccaagcgcga ggacgtccgg
     5341 gacctcaccg cggtgattct ggatcgtgac cgccacaaca acctgatcga ccaggtccga
     5401 gccgctggag cccgcatccg tctcattcca gacggtgacg tggccggtgc catctccacc
     5461 gcttggccta actcgggtgc cgacgtgttg ttcggcatcg gcggcacccc ggagggtgtc
     5521 atctcagccg ctgcactcaa gtgcatgggc ggcgccatcc agggtcggct gtggccccgg
     5581 aacgaggacg aacgcacggc tgctgtcgag gctggctacg acctggaccg ggtgctgggc
     5641 actgatgacc ttgtggccgg cgacaactgc ttcttctcgg cgaccggg
//
LOCUS       DASCMR010000095         2765 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000497486, whole genome shotgun sequence.
ACCESSION   DASCMR010000095 DASCMR010000000
VERSION     DASCMR010000095.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2765)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2765)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2765
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000497486"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..594
                     /locus_tag="QGG16_02475"
     CDS             <1..594
                     /locus_tag="QGG16_02475"
                     /inference="COORDINATES: protein motif:HMM:NF024950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HJP24172.1"
                     /translation="DIVESGGQATAAPFDVTDRDAVLAAVADLGPVDVLVNNAGNGGA
                     EAMLPKKFTDTDPDDWRGPMEVNLDGVLHCCHAVLPGMVDGGHGRIITISSAAGTHGV
                     GIGFATYSVGKGGSLSLMRSLALEHGRDGITANSVALGVMDSVRPETAAALTKSIPVG
                     RLGSPGDVGATCLWLASDEAGWVTGQTIGLNGGAFTS"
     gene            complement(631..1452)
                     /locus_tag="QGG16_02480"
     CDS             complement(631..1452)
                     /locus_tag="QGG16_02480"
                     /inference="COORDINATES: protein motif:HMM:NF012596.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HJP24173.1"
                     /translation="MLLVVATVYEEGEPMDYEHLRCERDGGFVTITLARPERRNCLST
                     GVLTELHHVFSATGEMSDVSGIVLASTGSVFSAGHDLAEMVEMTEEELRQLFEVCTVA
                     MRSMAEVPQVVVAQVQGVATAAGAQLAASADLIVASEDASFSTPGGKGGLFCHTPMVA
                     VARQIGRKRAVELALTGGEIPAATALDWGLVNRVVAHDDLESETLEFLRYATRGSRYA
                     KGLGKQTLYAQLEMTTDDAYDLAVDVMSRAAATGDGAEWPRAFVAKRKPEWTHTE"
     gene            complement(1459..>2765)
                     /locus_tag="QGG16_02485"
     CDS             complement(1459..>2765)
                     /locus_tag="QGG16_02485"
                     /inference="COORDINATES: protein motif:HMM:NF013739.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJP24174.1"
                     /translation="TLGCGRGDRTTTSPLTTTSNLPALFDHRITRWGQDPWSRGSYSY
                     LGPGASSATRRMLARPIDHRLFFAGEATDTEHPATVHGALASGQRAAIEIQEASKPGL
                     IVVIGAGVAGLGAARDLTAAGREVVVVESRQRIGGRVWSDTVGGAPVDLGGSWLHGLR
                     DNPLTDLAASLGIDLVHTDYEDAVLFDADGKLVNWSDLNHLYDLVEDMLSSSRSTKSM
                     ETAVDELRSQVEGEDRRYLEYVLASEIDHWFAAGPEDLAFSGVHEGGWSRGGDAVPAT
                     SYRPIIEHLATGLDIRLGHPVSEVIRTENGIRIATEETEFHGGAVVITVPLGVLQAGS
                     IRFDPALPAVKSTAIQTLGMGTMDKVVLHFDEPFWNPDVDLIAYASSEPGRFIEWYNA
                     VPWTGHPILVGFNAGRPAAEVESWSDERILTASLDVLGRLRW"
BASE COUNT          500 a          887 c          878 g          500 t
ORIGIN      
        1 gacatcgtcg aaagcggtgg ccaggccacc gcagcgccgt ttgacgtaac cgaccgggat
       61 gccgtgctgg ccgcagttgc cgacctcgga ccggttgacg tgcttgtcaa caacgccggc
      121 aacggtggtg ccgaggccat gctcccgaag aagttcaccg acaccgatcc cgacgactgg
      181 cggggaccga tggaggtcaa cctggatggc gtactgcact gctgccacgc tgtactaccc
      241 ggcatggtcg acgggggaca cggtcggatc atcaccatct cgtcggctgc cggaacccac
      301 ggggtgggca tcggcttcgc gacctactcg gtaggtaaag gcggctctct cagcctcatg
      361 cggagcttgg cactcgagca cggccgcgac ggcatcaccg ccaactcggt ggctctcggg
      421 gtcatggact cggttcggcc cgagacagct gccgcgctta cgaagtcgat acccgtcggg
      481 cgcctcgggt cacctggcga cgtcggtgcg acgtgcctgt ggctggcgtc cgatgaggct
      541 ggctgggtga ccgggcagac catcggactc aatggcggcg ccttcacctc atagacaacc
      601 gggtgtacgc gaatcacctg tgaatagtcg tcactccgtg tgggtccact ccggcttgcg
      661 cttcgcaacg aacgctcggg gccattcggc tccgtcgccg gtggccgcgg cacgagacat
      721 cacgtcgaca gccaaatcgt acgcatcgtc ggtggtcatc tcgagttggg cgtaaagggt
      781 ctgcttaccg agccccttcg cgtagcggct gcccctggtg gcatagcgga ggaactcgag
      841 ggtctccgac tcgaggtcgt cgtgggccac gacccggttc accagacccc agtcgagtgc
      901 cgtggcggct gggatctcgc ctcccgtcag ggctaactca accgcccgct tgcgaccaat
      961 ctgacgtgct acggccacca tcggcgtgtg gcagaacaat ccgcccttgc cgcccggcgt
     1021 ggagaaggag gcgtcctcgc tggccacgat gagatcagca ctggccgcca actgggcgcc
     1081 ggccgcggtg gccacgccct gtacctgggc gaccaccacc tgggggacct cagccatcga
     1141 cctcatcgcc acggtgcata cttcgaacag ttggcgtagc tcctcctctg tcatctcgac
     1201 catctcggcc aggtcgtggc ctgcggaaaa gacagacccg gtggaggcca acacgattcc
     1261 cgagacatcg gacatctcac cagtcgcgct gaagacgtgg tggagttcgg tcaggacgcc
     1321 cgtggacaga caattccgtc gctccggacg ggccagtgtg atggtgacga acccaccgtc
     1381 ccgctcacat cggaggtgtt cgtagtccat cggctcgcct tcctcgtaga ccgtggctac
     1441 cacgagcagc atgctcgttc accagcggag acgacctaga acgtccaagg aggcggtcaa
     1501 gatccgttcg tcactccagg actcaacctc tgctgccggt cggccggcgt tgaacccgac
     1561 caggatcggg tggccggtcc acggaactgc gttgtaccac tcgatgaacc gaccaggttc
     1621 ggatgaggcg taggcgatca ggtctacgtc gggattccag aacggctcgt cgaagtggag
     1681 caccaccttg tccatggttc ccataccgag ggtttggatg gctgtcgact taaccgctgg
     1741 gagggcgggg tcaaaccgga tggacccggc ctggagaact cccagtggga ccgttatgac
     1801 gacggcccct ccgtggaact cggtctcctc cgtggcaatc cggattccgt tttcggtccg
     1861 aatgacttca gaaaccggat ggcctaggcg aatgtcgagg ccggtcgcca ggtgctcaat
     1921 gatcggccgg taggaggtag cgggaacggc gtcaccgcct cgtgaccacc caccttcgtg
     1981 aactccggag aaggcgaggt cctcgggtcc cgccgcgaac cagtggtcga tctcggaggc
     2041 cagcacgtac tccagatacc ttcggtcttc gccctcaacc tgactgcgta actcgtccac
     2101 ggctgtctcc atcgatttcg tggaccgact agatgacagc atgtcttcaa ccaggtcgta
     2161 caggtggttc aggtcggacc agttcaccaa cttgccgtcg gcatcgaaca gcactgcgtc
     2221 ttcgtagtcg gtgtggacca ggtcgatgcc cagcgaggcc gctagatcgg tcagcgggtt
     2281 gtctcgcaag ccatgtagcc atgagccgcc taggtccact ggggcaccgc ccacggtgtc
     2341 cgaccagaca cgaccaccga tgcgttggcg tgactcgacc actaccacct cgcggccagc
     2401 ggcggtcaaa tcacgtgctg ctcccaatcc ggcgacaccc gcaccgatca ccacgatgag
     2461 acctggctta ctggcttctt ggatttcgat agccgcccgc tgtcctgagg cgagagcacc
     2521 gtggacggtt gccgggtgct cggtgtcggt tgcctctcca gcgaagaaca gacggtggtc
     2581 gattggtcgg gcgagcatcc gacgggtagc tgacgacgct cccgggccca ggtacgaata
     2641 cgaacctcgc gaccaggggt cctgacccca gcgagtgatc cgatggtcga ataacgctgg
     2701 gagatttgag gttgtggtga gaggtgaagt cgtggtgcgg tcaccgcgtc cacagcccag
     2761 cgtgg
//
LOCUS       DASCMR010000096         3795 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000498270, whole genome shotgun sequence.
ACCESSION   DASCMR010000096 DASCMR010000000
VERSION     DASCMR010000096.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3795)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3795)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3795
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000498270"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..359
                     /locus_tag="QGG16_02490"
     CDS             <1..359
                     /locus_tag="QGG16_02490"
                     /inference="COORDINATES: protein motif:HMM:NF024966.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HJP24175.1"
                     /translation="ARVLLGDPANDDTPIVDRDGLAAVWQSMVRLHGDGTPRTRHLVA
                     TPIIEVADDEMKATCRSTYTVFQQVGDGPLQPIITGRYHDRFELVDGAWQFAERAYLM
                     DLTGDLSSHLMGGLGT"
     gene            complement(327..974)
                     /locus_tag="QGG16_02495"
     CDS             complement(327..974)
                     /locus_tag="QGG16_02495"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004797 - thymidine kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HJP24176.1"
                     /translation="MAILRFSFGTMGSGKSTLALQIHHNLRERGLQGILCSQLDRADG
                     RVSSALGVSADAVEVGPRLDLFEMALAAASRRGRIDYLVCDEAQFYLPSQIDQLARIV
                     DDLGADVFAFGLLTSFQGQLFDGTRRLLEVADERVEVQVEARCWCGERATHNARLVDG
                     VQVYDGALFVVDDPEDHVVTYELRCRRHWTAGDSGVRGQAGSLLDSGAEPAHEVA"
     gene            complement(1003..>3795)
                     /locus_tag="QGG16_02500"
     CDS             complement(1003..>3795)
                     /locus_tag="QGG16_02500"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020376941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12-dependent ribonucleotide reductase"
                     /protein_id="HJP24177.1"
                     /translation="RGILGIRRRFTRDGVDPYDDIEWEVRTSRLIDHRDGSVAFEQDD
                     VEVPTDWSVNATNILAQKYFRGALDAPERESSLRQVADRVAGTIADWGLRDGYFVDAD
                     EAAAFADELRHLVITQRAAFNSPVWFNIGVPEVPQQASACFILSVDDQMSSILNWYVE
                     EGTIFKGGSGAGINLSAIRSSREALRGGGQASGPVSFMRGADASAGTIKSGGTTRRAA
                     KMVVLDVAHPDVEEFVWCKAREERKVRVLEQAGFDVGFDGADSHSIMYQNANNSVRVT
                     DEFMMAVEADAVWDLKAVTDGSVLDTIGARDLFRQMSEAAWECADPGIQFDTTINRWH
                     TASNTGRITASNPCSEYVHLDDSACNLASLNLLTFLGSSDDDTGVIGGFDVEGFCHAV
                     EVVFTAQEILVGNADYPTEAIGETTRAFRQLGLGYANLGALLMALGLPYDSDEGRSVA
                     AAITSLMTGHAYRTSARMADRMGPFEGFEHNREPMLSVLEMHREAAELLDDAVAPELV
                     TAGRTAWFEACALAQRVGVRNSQATVLAPTGTIGLLMDCDTTGIEPDLSLVKHKRLVG
                     GGTMSIVNRTVPRALRRLGYDDVATAAVLAWIDEHQTVIGCPDVSAEHMAVFATSMGD
                     NPIHHMGHIRMMGAVQPFLSGAISKTCNMPEEVTVDDVEELYLEAWRLGLKAVAIYRD
                     NCKVAQPLTVGDASSTSAGGPADVAARVTEQVNAELPEPVRRRLPRSRASRTFEFRVA
                     DCKGFVTVGEYEDGRPGEVFVRVSKQGSTMAGIMDAFAISLSHGLQYGVPLRAFVDAF
                     TGMRFEPAGMTDDPDLRIATSLIDYLFRRLAVEYLSPEERAELNILTTSERTQPTLPG
                     VEESATETRQGNDVPADPPTVPSASQFAAQLSLADAPSVRASANAPLCMQCGVAMQRA
                     GSCYVCTDCGATSGCS"
BASE COUNT          691 a         1242 c         1227 g          635 t
ORIGIN      
        1 atgcccgcgt actgctgggc gacccggcca acgacgacac cccgatcgtg gaccgcgacg
       61 gcctggctgc cgtatggcag tcaatggtcc gcctccacgg ggacgggaca ccgcggaccc
      121 gccatctggt ggccacgccg atcatcgagg tagccgatga tgagatgaag gcgacgtgcc
      181 ggagcaccta cacggtgttc cagcaggtcg gcgacgggcc gctccagccg atcatcaccg
      241 gtcggtacca cgaccgattc gagttggtcg acggagcctg gcagttcgct gaacgggcct
      301 acctgatgga cctcaccgga gacctctcaa gccacctcat gggcgggctc ggcacctgag
      361 tccaggagcg atccggcctg gccccggaca ccggagtcgc ccgccgtcca gtgccggcgg
      421 caccggagtt cgtaggtgac gacgtggtcc tcgggatcgt ccaccacgaa cagcgctccg
      481 tcgtagacct gcaccccgtc cactaggcgg gcgttgtggg tggcccgctc accacaccag
      541 caccgggcct cgacctggac ctcaacccgc tcatcagcca cctcgaggag ccggcgggta
      601 ccgtcgaaca gttgaccctg aaagctggtg agcaacccga aggcgaagac gtcagcacct
      661 aggtcgtcga caatgcgggc taactggtcg atctgactcg gaaggtagaa ctgggcctca
      721 tcgcagacca aatagtcgat acgtcctcgt cgggaagccg ctgccagggc catctcgaac
      781 aggtctaggc gaggaccaac ctccacagcg tcagcggaca ctccaagggc gctggacacc
      841 cgaccgtctg cccggtccag ctgactacac aggattccct gaaggccccg ctctcgcagg
      901 ttgtggtgga tctgcagggc cagcgtgctc ttgccggacc ccatcgtccc gaaggagaag
      961 cgaagaatcg ccatcagtaa cggccctcga ggggacttgg gatcacgagc atccgctggt
     1021 cgcaccacag tcggtgcaca cgtagcacga cccggcccgc tgcatggcca cgccgcactg
     1081 catgcacagc ggtgcgttgg ccgatgcccg gaccgacggt gcgtcagcga gggacagttg
     1141 ggcggcgaac tgcgacgccg acggcacggt cggcggatcc gccggcacgt cgttgccctg
     1201 acgggtctcg gtggccgatt cctcgacacc gggcaacgtc ggctgggtgc gttcactggt
     1261 ggtgaggatg ttcaactcgg cccgttcctc ggggctgagg tattccaccg ctaggcggcg
     1321 gaatagatag tcgatgaggc ttgtggcgat cctgaggtcg ggatcgtcgg tcatgccggc
     1381 cggctcaaag cgcatgccgg tgaaggcgtc cacgaaggcc cgaagcggaa ccccgtactg
     1441 cagtccgtga ctgagcgaga tggcgaacgc atccatgatt cccgccatgg tcgagccctg
     1501 cttggaaacc cgcacgaaga cctcgccggg tcggccatcc tcgtattcgc cgaccgtgac
     1561 aaagccttta cagtcggcaa cccggaactc aaaggtgcgt gacgcacggc tacggggcag
     1621 gcgacgccgg accggttctg gcagttcggc gttcacctgt tcagttaccc gggctgccac
     1681 gtcagcgggc ccaccggcgg acgttgacga ggcgtcgcca accgtaaggg gctgggccac
     1741 cttgcagttg tcgcggtaga tagccactgc cttgaggccg aggcgccatg cctcgaggta
     1801 gagctcctcg acatcgtcga cggtgacctc ttcaggcatg ttgcaggtct ttgagatggc
     1861 gcccgacaga aacggctgga cggcacccat catccggata tgtcccatgt ggtggatggg
     1921 gttgtcgccc atcgaggtgg cgaacaccgc catgtgttcc gcactgacgt cggggcaacc
     1981 gatcaccgtc tggtgctcat ctatccatgc caagacggct gccgtagcaa cgtcgtcgta
     2041 accgaggcgc cgcagggccc gaggcacggt ccggttgacg atcgacatcg tgccgccgcc
     2101 gaccaggcgc ttgtgcttga ccaggctgag atctggctcg atgccggtcg tgtcgcagtc
     2161 catgagcaag ccgatggtgc cggtgggcgc cagcacggtg gcctgactgt tccgcacgcc
     2221 cacccgctgc gccaacgcgc aagcctcgaa ccacgctgta cgacccgcgg tgaccagctc
     2281 aggtgccacc gcgtcgtcaa gcaattcggc ggcctcccgg tgcatctcga gcacgctgag
     2341 catcggttcg cggttgtgtt cgaagccctc gaacggcccc atccggtcag ccatacgagc
     2401 cgaagtgcgg taggcgtgac cggtcatgag cgaggtaatc gcagcggcca ccgaccgacc
     2461 ctcatcgctg tcgtagggca gtccgagagc catgagcagc gcaccgaggt tggcatagcc
     2521 caggccgagt tgacggaagg cccgggtggt ctcgccaatg gcctcggtcg gatagtccgc
     2581 gttgccgacc agaatctcct gggcggtgaa caccacctcg acggcatggc agaagccctc
     2641 cacgtcgaac ccaccgatga ctccggtgtc gtcgtctgac gaaccgagga aggtcagcaa
     2701 gttgaggctg gccagattgc aggccgaatc gtcgaggtgc acatattccg agcatggatt
     2761 actggcggtg atccggccgg tgttggaggc cgtgtgccaa cggttgatcg tggtgtcgaa
     2821 ctggatgccg ggatcggcgc actcccaggc agcctcggac atctgtcgga acaggtcacg
     2881 ggcaccgatc gtgtcgagca ccgaaccgtc cgtgacggcc ttgaggtccc agacggcgtc
     2941 ggcctcgacg gccatcatga actcgtcagt cacccggacc gaattgttgg cgttctggta
     3001 catgatcgaa tgactgtcag cgccgtcgaa cccgacgtcg aacccggcct gttccaggac
     3061 acggaccttg cgctcctcgc gggccttgca ccagacgaac tcctcaacgt cagggtgagc
     3121 cacgtcgaga acgaccattt tcgcggcccg gcgggttgtg cctccgctct tgatggttcc
     3181 ggccgaggca tcggcaccac gcatgaagct gaccggcccg ctggcctggc ctccgccccg
     3241 cagggcctct ctggaggatc ggatggcact taggttgatg ccggcgcccg aaccgccctt
     3301 gaagatcgtg ccttcctcca cgtaccagtt gagaatggac gacatctggt catcgaccga
     3361 gaggatgaaa caggcggatg cctgttgcgg tacttcgggg acgccgatgt tgaaccagac
     3421 cggcgagttg aaggcagccc tctgggtgat caccaggtgg cgcaactcgt cggcgaacgc
     3481 cgcagcttcg tcggcgtcga cgaagtaccc atctcgcagg ccccagtcgg caatggtgcc
     3541 ggccacccgg tcggcgacct gacgcagaga ggattcccgc tccggggcat cgagcgcccc
     3601 ccggaagtac ttctgggcga ggatgttcgt ggcgttgacc gaccagtccg tggggacctc
     3661 cacgtcatcc tgttcgaagg ccaccgatcc atcacggtgg tcgatcaggc gggaggtccg
     3721 aacctcccac tcaatgtcgt cgtagggatc caccccgtcg cgtgtgaatc gacggcggat
     3781 ccccaggatc ccccg
//
LOCUS       DASCMR010000097         2682 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000500586, whole genome shotgun sequence.
ACCESSION   DASCMR010000097 DASCMR010000000
VERSION     DASCMR010000097.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2682)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2682)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2682
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000500586"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(554..1420)
                     /locus_tag="QGG16_02505"
     CDS             complement(554..1420)
                     /locus_tag="QGG16_02505"
                     /inference="COORDINATES: protein motif:HMM:NF013706.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HJP24178.1"
                     /translation="MATDGSGSRETRRIMLDGSVVPVTVDGKELVTSDGRRISEADAM
                     HLPPSEPSKILCVHLNHVSRVEEFQVSLPAAPTYFQKPTSSLNAHRGEVVRPERCRWL
                     NYEGEIVIVMGRLCRNVSPDEAGDFIAGYSIGNDYGLHDFRDTDAGSMLRVKGSDTMC
                     PVGPGLVEGWDFRGKGIRTLVNGEVAQDGNTDEMTWDMHYLVADLARTITLLPGDMIF
                     SGTPANSRPVQPGDVVTVEVEGIGALTNTIVTGPVPIRDDCGAQPTESEEVLSTALGG
                     DWEFRGIRSPER"
     gene            1512..2321
                     /locus_tag="QGG16_02510"
     CDS             1512..2321
                     /locus_tag="QGG16_02510"
                     /inference="COORDINATES: protein motif:HMM:NF018066.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetate decarboxylase family protein"
                     /protein_id="HJP24179.1"
                     /translation="MANLQGFTFPRSATGLSSLVPSPPWHYSGDMLTIEYRTDPAAVA
                     ELLPEPLTPVDDDPGAVAIIWADWQSCSDDFNEVVDPDRLQYKECFVVVRCTYEGQTY
                     SRCVYIWVDKDYAMLRGHVQGYPKKLGDIWVTRPVTVGKAGPRLEPGGHFGATCSAYG
                     RRLIEAEFTITGPSDHAGFVNALPMIHHRYFPAIEADGTDSLHELVTMQGYDAEVSPA
                     FTGDVDLRVFESPVEELNRLAPKEMIAGYWRSVSASWNGGTTLADLRPERE"
     gene            2333..>2682
                     /locus_tag="QGG16_02515"
     CDS             2333..>2682
                     /locus_tag="QGG16_02515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24180.1"
                     /translation="METKVARHPWTPDSDDGHVDLSSHDTWVAGTPYSTFQRMRDEDP
                     VAWVDEADGSGFWAVTRYDDVVDLNRRWGDFTSYQGIRLEEMDAEETEARRTLMELDP
                     PDHTRLRRLVNRGFT"
BASE COUNT          521 a          880 c          779 g          502 t
ORIGIN      
        1 cttcgagccc gggatatcca cgaaccccac aacgtcggag aagtccatcg ccattcccac
       61 gcggatcggg tcacccgacg gtgcatcggc gcaatccgaa aggtccgccg ccaagaccgc
      121 gtccacatct agacccgaca tcgccgctgc tgagccgtct cctgatgcag cggtagtcgc
      181 aggggcagct gttgttgccg gggcagttgt tgttgccggg gcagctgttg tctgtggctc
      241 cgacgcctcg tcactactgc tcccgcagga cgcagctgtg actgccaaga ctgttagcaa
      301 agccatcgtg aatttcgttt tcatatcggg tcacccctcc ggatggaact caattagaga
      361 ccagttagta cttcagaatc cttgcatcta aatcattcgg gtaaatcatt cgggtaaatc
      421 attcgggagt aaacgacggt caaccgagcg gcctactgat gctcctgacc tgtcgcgtcg
      481 agcgggtttg caacgacggc gccatattta catacaaaat ctaaatgtgc actagccagt
      541 cgttgccacc acttcagcgc tctggagagc ggataccacg gaactcccag tcgccaccga
      601 gggcggtcga taggacctct tcggactcgg tgggctgggc accacagtcg tcacggatgg
      661 gcactggacc ggtcacgatg gtgttggtaa gcgccccgat gccctcaacc tccacggtga
      721 ccacgtcgcc gggctgcacg ggccgggagt tggccggcgt gcccgagaag atcatgtccc
      781 ctgggagcag ggtgattgtg cgggccaggt cggccaccaa gtagtgcatg tcccacgtca
      841 tctcgtcggt gttgccgtcc tgggccacct cgccattgac cagggtgcgg atgcccttgc
      901 cccggaagtc ccagccctcg accaggcccg gaccgaccgg gcacatggtg tccgagccct
      961 tgacccgcaa catcgagcca gcatcggtgt cacggaagtc atgcaggccg tagtcgttgc
     1021 cgatgctgta cccagcgatg aagtcgcccg cctcgtcggg gctgacgttg cgacacagtc
     1081 gacccatgac gatgacgatc tcaccctcgt agttgagcca acggcatcgc tcgggtcgca
     1141 ccacctcgcc acgatgtgcg ttcaacgagg acgtcggctt ttggaagtaa gtgggcgccg
     1201 ccggcaatga aacctggaac tcctcgaccc ggctgacgtg attgaggtga acgcagagga
     1261 tcttggatgg ctcgctagga ggcaggtgca tggcgtcagc ctccgagatt cggcgaccgt
     1321 cgctggtcac caactctttg ccatccactg tcactgggac caccgacccg tccagcatga
     1381 ttcgccgggt ctctcgcgat ccgcttccgt ccgtggccac ccgcagctcc caatcggtca
     1441 atcccgcgct attggcggga gcagcatctt tgcatggaag tcgttaggga ccaaatgata
     1501 cgctcatcat catggcaaac ctccaaggct ttacgttccc ccgctcggcc accggcctct
     1561 cctcactggt cccctcgcct ccgtggcact actcgggcga catgctcacc atcgagtacc
     1621 gcaccgaccc agcggccgtg gctgaactac ttcccgagcc gttgacaccg gttgacgacg
     1681 acccgggcgc ggtggccatc atctgggccg actggcagtc ctgctccgac gacttcaatg
     1741 aagtcgttga tcccgaccga ctccagtaca aggagtgctt cgtcgtcgtc cgctgcacct
     1801 acgagggcca gacgtacagt cgctgcgtct atatctgggt cgacaaggac tacgcaatgt
     1861 tgcgtggcca cgtgcagggc taccccaaga agttgggcga catctgggtc acccgaccag
     1921 tcacggtagg caaggccgga cctcgacttg aacctggcgg ccacttcggc gccacctgct
     1981 cggcctacgg gcgccgactt atcgaagccg aattcacaat cactggcccc agcgaccacg
     2041 ccggcttcgt gaacgctttg ccaatgatcc accaccgata tttcccggcc atcgaggctg
     2101 acggcaccga ttcgctgcac gaactggtca ccatgcaggg ctacgacgct gaagtcagtc
     2161 cggcattcac cggcgacgtc gatctccggg tattcgaatc tccagtcgag gaactcaacc
     2221 gcctcgctcc caaggaaatg atcgccggat actggcgcag cgtgagcgct tcgtggaacg
     2281 gaggcaccac tcttgccgat ctccgcccag aaagggaata gtgaccggca acatggagac
     2341 gaaggtggcc cgtcacccct ggacaccgga ctccgacgac ggccacgttg acctgtcgtc
     2401 acatgacacc tgggtggccg gcacgccgta ctccaccttc cagcgaatgc gcgatgagga
     2461 tccggtggca tgggtcgacg aggctgacgg ctccggcttc tgggccgtga ctcgttacga
     2521 cgacgtggtc gacctgaacc gacggtgggg cgacttcacc tcctaccagg gcatccgtct
     2581 cgaagaaatg gatgctgagg agaccgaggc tcggcgcacc ctcatggagc tagacccacc
     2641 cgaccacacc aggttgcgcc ggctcgtcaa ccggggcttc ac
//
LOCUS       DASCMR010000098         5593 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000501026, whole genome shotgun sequence.
ACCESSION   DASCMR010000098 DASCMR010000000
VERSION     DASCMR010000098.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5593)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5593)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5593
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000501026"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..397)
                     /locus_tag="QGG16_02520"
     CDS             complement(<1..397)
                     /locus_tag="QGG16_02520"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HJP24181.1"
                     /translation="MVEHEHLDVLIVGAGISGLGGAVHLKDRCPNSTFAILEGRPDIG
                     GTWDLFRYPGVRSDSDMHTLGFRFKPWKHEKSIADGPVILDYLRETVAENDLARYIRF
                     GHQVADAQWSSIDARWTVTATRTDPTGGAT"
     gene            522..1115
                     /locus_tag="QGG16_02525"
     CDS             522..1115
                     /locus_tag="QGG16_02525"
                     /inference="COORDINATES: protein motif:HMM:NF012655.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HJP24182.1"
                     /translation="MTPLMAEPTTISGTQRQILEAVLSCLAEGGIAGASMRAVAAEAG
                     VSLGLLNYHFAGKQALIAEAVQLACDRLLSDSLLSLKGVVGADDRVRAFIRGAAADEF
                     LSPEYLRLRLVIWAAARLYPDIGVVDLLVYQEYVDRMEELIGEARPGLSAENVHQRAD
                     DVSINQNGLWLHWARFRNRESLERGLRRCEDIALGAG"
     gene            1116..2036
                     /gene="cysD"
                     /locus_tag="QGG16_02530"
     CDS             1116..2036
                     /gene="cysD"
                     /locus_tag="QGG16_02530"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA];
                     GO_process: GO:0019419 - sulfate reduction [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HJP24183.1"
                     /translation="MVPSTSLRHRTHLEQLEAEAIHVMREVVAQFERPVMLYSIGKDS
                     SVLLHVARKAFAPGPIPFPLLHVDTTWKFREMIEFRDRTAVELGLDLIVHSNPEGVAA
                     GINPFDHGSRNYTDVMKTQGLRQALDAGGFDAAFGGARRDEEKSRAKERVFSFRDGNH
                     RWDPKNQRPELWNLYNGRVDRGESIRVFPISNWTELDVWQYIHLEGIEIVPLYRAADR
                     PVVERDGTLIMVDDDRFRFTDGEQPHVRSVRFRTLGCYPLSGAVESTATTLPEIIQEM
                     LLATRSEREGRVIDHDQSGSMEEKKREGYF"
     gene            2036..3955
                     /gene="cysN"
                     /locus_tag="QGG16_02535"
     CDS             2036..3955
                     /gene="cysN"
                     /locus_tag="QGG16_02535"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: protein motif:HMM:NF004035.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysN"
                     /protein_id="HJP24184.1"
                     /translation="MSHASDLIATDIEAYLAEHERKDLLRLLTCGSVDDGKSTLIGRL
                     LHDSKMIYEDQLAGLEADSTTIGSAGDHLDLALLMDGLKAEREQGITIDVAYRYFSTA
                     RRKFIVADTPGHEQYTRNMATGASTCQLAVILVDARHGVLDQTRRHSYIASLLGIRNV
                     VVAVNKMDLVDWSSDVFEAICAEYQGFAAGLEFADQYFLPMSALLGDNVVGPGDHLDW
                     FDGPPLMEYLETVDVDAAVDVDRLRLPVQLVVRPDLDFRGFAGTVASGVVRPGDPIVA
                     LPSGIPSTIGRIVTFDGDLNEAGPGDAVTVTLTDEIDVSRGDLLVGVEHPPIRAHDVD
                     AMVVWMADAEMQPGRQYLLQSINGLSNVSVSSIEHRVDVNSLERVPAETLGLNDIARC
                     GLTSDRALLFDPYTMNRQTGSFVLVDRMNNATVAAGMMLGQSSIWNRSPDAGLIRHRS
                     EITPAERVARLGQRSCTVLLTGLTAAGKSTIAAALERRLFDRGRTTMRLDGENIRLGI
                     SRDLGFGARDRSENLRRVAEVALLANRQGLIVIAALVAPEADVRARARELIGEHRFVE
                     VFVDTPIEVCRQRDPNGQYEAADRGEIADYPGVSSTYEQPTDMDLRLDASVQGVDECV
                     DAILTVLEERGVLDG"
     gene            3948..4568
                     /gene="cysC"
                     /locus_tag="QGG16_02540"
     CDS             3948..4568
                     /gene="cysC"
                     /locus_tag="QGG16_02540"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: protein motif:HMM:NF003013.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004020 - adenylylsulfate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HJP24185.1"
                     /translation="MAELSNENPASGNITRAEGHVDDVARSAVTGHSGRTVWFTGLSG
                     SGKSTLAFAVEEALIERGVLAYVLDGDNVRMGLNRDLGFSPDDRTENIRRIGEVCRLF
                     QDAGLVVLTAFISPYRSDRNAVRALHPAGSFLEVHVDTPIEVCEERDVKGLYAKARAG
                     EIPDFSGISAPYEAPVDPDLRIDTSQPLADCVEMVLDALDTEGFDG"
     gene            4565..>5593
                     /locus_tag="QGG16_02545"
     CDS             4565..>5593
                     /locus_tag="QGG16_02545"
                     /inference="COORDINATES: protein motif:HMM:NF012927.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-methylproline demethylase"
                     /protein_id="HJP24186.1"
                     /translation="MTEPLLEPFDLAGLRLRNRIFSSSHSPGYNVDGTPSDRYVRYHE
                     EKAAGGLGLTMIGGSSNVSRDSASLWGQLSFATDAIVDPLADMVERVHAHGTAIMCQL
                     THMGRRNVSNDGDWLPTIAPSPVREPMHRFWPKEAEPSDLERVVGDFTAATRRAVDAG
                     LDGIELTATSHLLDQFWSPLVNRRTDGYGGSLDNRLRFTFEVLEAVRSAADGHLLVGL
                     RMLGTEDQPGGLDEEACCEIAVRLAGSGMLDFLNVAGPSLATDNGLSKAIPPAGTPLA
                     PYLPVAAAVRDAVDLPLLHATRITDLATARHAIESGAVDLVGMTRAHFADPHLVVKLE
                     RGEADRIRT"
BASE COUNT         1008 a         1734 c         1788 g         1063 t
ORIGIN      
        1 cagtggcacc acccgtgggg tcggtcctgg tggccgtcac cgtccaacgg gcgtcgatgc
       61 ttgaccactg ggcgtcggct acctgatggc caaagcggat gtatctggct agatcgttct
      121 cagccaccgt ctcacgcaga tagtcgagaa tgaccggacc gtcggcaatc gatttctcgt
      181 gtttccacgg cttgaatcta aagccgaggg tgtgcatgtc actgtcggat cggacgccgg
      241 gatacctgaa caggtcccat gtgccgccga tatcggggcg cccttccaga atggcgaatg
      301 tcgagtttgg acagcgatct tttaggtgga cggcaccgcc cagtccggag atgccagctc
      361 ccacgatcag gacgtcgagg tgctcgtgtt ccaccatggg atggacaata ggaaagctgt
      421 gggacgggtg gggaaccggg cgcggcaaca gatgccagac cagaggatgg ctgcgcagat
      481 ttgaagacta gactggacga tcgttcagtt cgtcgaacga gatgactccc cttatggcag
      541 aaccgacgac tatcagcggc actcaaaggc aaatactcga ggctgtcctg tcctgcctcg
      601 ctgaaggtgg tattgctgga gcaagcatgc gggccgtagc cgctgaggcc ggtgtttcgc
      661 tcggcctact gaactatcac tttgccggca agcaggccct catagcggag gccgtacagc
      721 tggcctgtga tcgcctgctg agcgattccc tgttgtcgct caaaggcgta gtgggcgctg
      781 atgacagagt ccgtgctttc atccggggag cggctgctga cgagtttttg tcaccggagt
      841 accttcgcct ccgcttagtg atctgggccg cggcgcgcct ctatcccgac ataggcgtag
      901 tggacttgct cgtctaccag gagtatgtgg accggatgga agagctcatc ggggaggccc
      961 gtcccggcct cagtgccgag aatgtccacc agcgggctga tgacgtgtcc attaaccaga
     1021 acggactgtg gcttcactgg gctcggttcc ggaaccggga gtccttggaa cgtgggttgc
     1081 gacgttgcga ggacatcgcc ctcggtgcag gctgaatggt gccctcgacc tcgttgcgac
     1141 atcgcaccca tctcgaacaa ctggaggccg aggccattca cgtaatgcgt gaggtggtgg
     1201 cccagtttga gcggccggta atgctctatt cgatcggcaa ggactcctcg gtcctgttgc
     1261 acgtagcccg caaggccttt gcgccgggac ctattccgtt cccgctgctt cacgtagaca
     1321 ccacgtggaa gtttcgggag atgatcgagt tccgggaccg cacggccgtc gagctaggcc
     1381 tcgatctcat cgtccattcg aacccggagg gtgtggcggc cggcatcaac ccgttcgacc
     1441 acgggtcacg caactacacc gatgtcatga agacccaggg tctgcgccag gccctcgacg
     1501 ctggcgggtt cgacgctgcg ttcggtgggg cacgccgcga cgaggagaag tcccgggcca
     1561 aggagcgggt atttagcttc cgggatggca accaccggtg ggaccccaag aaccagcgtc
     1621 ccgaactctg gaatctttac aacggacggg tcgaccgggg cgagagcatc cgggtgtttc
     1681 cgatcagcaa ctggaccgag ctagatgtct ggcagtacat ccacctggaa ggcatcgaga
     1741 tcgttcccct gtaccgcgcg gcggatcgac cggtcgttga gcgagacggc acgctaatca
     1801 tggttgacga cgaccgcttc cgattcaccg atggtgagca gccgcatgtg cggtcggtgc
     1861 ggttccgcac gttgggctgc tacccgctgt ccggtgccgt cgagtcgacg gccaccacgc
     1921 tgcccgagat aattcaggag atgctcctag ccacccgttc cgaacgtgag gggcgagtga
     1981 tcgaccacga tcagtcggga tccatggagg agaagaagcg ggaggggtat ttctgatgtc
     2041 ccacgcttcg gaccttatcg ccaccgacat cgaggcctat ctggctgaac acgaacgcaa
     2101 ggacctcctg cgcctactga cgtgcggcag tgtcgacgac ggaaagtcga cgctcatcgg
     2161 tcgtctgctt cacgactcca agatgatcta cgaggatcag ctggcaggct tggaggccga
     2221 ctcgacgacg atcgggtcag ccggtgacca cctcgacctg gcgcttctca tggatgggct
     2281 caaggccgaa cgcgagcagg gcatcaccat cgacgtggcc taccgctact tctcgacggc
     2341 ccgccgcaag ttcattgtgg ctgacacgcc gggccacgag cagtacaccc gcaacatggc
     2401 tacgggagcg tcgacctgcc agttggctgt gatccttgtg gacgcccgcc acggagtgct
     2461 tgaccagacg cggcgccata gctacatcgc gagcctgctg ggtatccgaa acgtggtggt
     2521 ggccgtcaac aagatggacc tggtcgactg gtcatcagac gtattcgagg cgatctgtgc
     2581 cgagtaccaa gggttcgcag ccggtttgga gttcgccgat cagtacttct tgcccatgtc
     2641 ggccttattg ggtgacaacg tggtgggccc gggcgatcac ctcgactggt tcgatgggcc
     2701 gccgctcatg gagtacctag agaccgtcga cgtcgatgcc gccgtcgacg tcgaccgtct
     2761 tcggctgccc gtgcagctgg tagttcggcc cgatctcgac ttccgggggt ttgccgggac
     2821 ggtggcgtcc ggtgttgttc ggcccggcga tcccatcgtg gcgctcccct cagggattcc
     2881 gtcgaccatc gggcgcatcg tgaccttcga cggcgaccta aacgaggccg gaccaggcga
     2941 cgccgtcacc gtgacgttga ccgatgaaat cgacgtcagt aggggtgacc tactggttgg
     3001 ggttgagcat ccgccgatcc gggcccatga cgtggacgcc atggtcgtct ggatggccga
     3061 cgctgagatg cagccgggcc gccagtacct gctccagtcg atcaacgggc tgagcaacgt
     3121 gtcggtgtca tctatagagc atcgggtcga tgtgaacagc cttgaacgcg tcccggctga
     3181 gaccctggga ttgaacgaca tcgcgaggtg tggtctcacc tcggatcggg cactcctgtt
     3241 cgatccgtac accatgaacc gccagacggg atcgtttgtc ctcgtcgacc ggatgaacaa
     3301 cgccacggtg gccgccggaa tgatgctcgg ccagtcatcg atctggaatc gcagtccgga
     3361 cgccggtctc attcgtcacc gctccgagat cacgcccgca gagcgggtag cccgcctcgg
     3421 acagcgctcg tgcaccgtcc ttctgaccgg tctgacagcg gccggcaagt cgaccatcgc
     3481 tgcggccctg gaacgccgcc tgtttgaccg tggccgaacg accatgcgtc ttgacggtga
     3541 gaatattcgc cttggcatca gccgggacct cggcttcgga gcccgggacc gctctgagaa
     3601 cctgcgtcga gtggctgagg tggccctgtt ggccaaccgt cagggactca tagtcatcgc
     3661 cgcccttgta gcacccgagg ccgacgtccg tgcccgtgcc cgtgaactca tcggtgaaca
     3721 ccgcttcgtg gaggtattcg tcgacacccc aatcgaggtc tgtcgtcagc gcgatccgaa
     3781 cggccagtac gaagcagccg accgcggcga gatcgccgac tacccggggg tgtcatcgac
     3841 ctacgagcaa cccaccgaca tggatctccg actcgatgcc tccgtccagg gtgttgacga
     3901 gtgcgtggac gccattctga cggtccttga ggagcggggt gtgctggatg gctgagctgt
     3961 cgaacgagaa cccagcgtcg ggcaacatca cccgggccga gggacacgtc gatgatgtcg
     4021 cccggtcggc ggtgaccggc cattctggcc gaaccgtctg gttcaccggc ctgtctggtt
     4081 cgggcaagtc gaccctggcc ttcgccgttg aggaggcact catcgagcgg ggcgtattgg
     4141 cctacgtgtt ggacggcgac aacgtccgca tgggtttgaa tcgtgacctt gggttttctc
     4201 ccgacgaccg aaccgagaac atccgccgca tcggcgaagt gtgccggctc ttccaggacg
     4261 ctggcctggt ggtcctcacc gcattcatct cgccataccg atccgaccgg aatgccgtgc
     4321 gggccctcca tccggctgga tcgttcctgg aggtacatgt ggacacgccg atcgaagttt
     4381 gcgaggagcg cgacgtaaag ggcttgtacg caaaggcccg ggccggtgag atccctgatt
     4441 tcagcgggat ttcagccccg tatgaggcgc ccgtcgaccc cgacctacgg atcgacacca
     4501 gccagccgct ggccgactgt gtcgaaatgg tgttggatgc gctggacacc gagggtttcg
     4561 acgggtgacc gaaccactgc tcgagccgtt tgatctggcg gggctacgac tccgcaaccg
     4621 gatcttttct agtagccact cgcccgggta caacgttgac ggcacgccca gtgaccgtta
     4681 cgtccgttac cacgaggaga aggcggccgg cgggctaggc ctgaccatga tcggcggctc
     4741 gtccaacgtg tcgcgtgact cagcatcgct gtgggggcag ttgagtttcg ccaccgacgc
     4801 catcgtcgat ccactagcgg acatggtgga acgggtacac gcacacggga cggccatcat
     4861 gtgccagctc acccacatgg gtcgccgcaa cgtttctaac gacggagact ggttgccgac
     4921 catcgccccg tcaccggtcc gcgaacccat gcaccggttt tggcccaagg aggccgagcc
     4981 gtcagacctg gagcgggtgg tgggcgactt caccgcggcc acccgtcgag cggtcgacgc
     5041 cggcctcgat ggaatcgagc taacggccac cagccatcta ctggaccagt tctggtcccc
     5101 gttagtcaac cgtcgcacag acggctacgg cggttcgctg gataaccgcc tccgattcac
     5161 ctttgaggtg ctcgaggcgg tacggagcgc tgcggacgga cacctcctgg tcgggctgcg
     5221 gatgctaggc accgaggacc agcccggcgg cctcgacgaa gaggcgtgct gcgagattgc
     5281 cgttcgtctt gcaggatccg ggatgctcga cttcctcaac gtggcagggc cctcgctggc
     5341 caccgacaac ggcctctcga aggccatccc gccggccggg acgccgctag ccccatactt
     5401 gccggtggcc gctgctgttc gtgacgctgt tgacctacct ctcctgcacg ccacccgaat
     5461 caccgacctg gccaccgccc gacatgccat cgagtccgga gccgtcgact tggtagggat
     5521 gacccgggcc cacttcgctg atccgcacct tgtggtcaag ttggagcggg gggaggccga
     5581 tcgcattcga act
//
LOCUS       DASCMR010000099         3592 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000504938, whole genome shotgun sequence.
ACCESSION   DASCMR010000099 DASCMR010000000
VERSION     DASCMR010000099.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3592)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3592)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3592
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000504938"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..517
                     /locus_tag="QGG16_02550"
     CDS             <1..517
                     /locus_tag="QGG16_02550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HJP24187.1"
                     /translation="DAATDRWPDLWSPGRSDLCFATTNRQGALLELVDRCDAVVVIGS
                     TNSSNTRALVQLATEAGCPRVVWINRAEELPDDLSGTVGVTAGASAPEEVVDEVIRSL
                     APTSGVETVRHTDEDEYFPPPRNLRDLLHAVRGFAAVGFSAPAPTVHLDDRVIDASDA
                     LAALDRLRPVS"
     gene            complement(510..1304)
                     /locus_tag="QGG16_02555"
     CDS             complement(510..1304)
                     /locus_tag="QGG16_02555"
                     /inference="COORDINATES: protein motif:HMM:NF013702.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HJP24188.1"
                     /translation="MTDQSGDPTENPTGETGNSDLGRKMSLVDGVAYRVCWSALWLLC
                     KVWFRFRVVGKANLPSEEAYILTPVHRSYLDTPVGGMVTARRQRFLGKESLWRNRFAG
                     RFLTIVGGFPVERGTADRAALRACQEVLERGEPMVMFPEGTRQHGPVVRADLMRAGPA
                     FVAVRAGVPLVPMGIAGTDYAMPGGSPMVRPVRVVMVVGEPIRPPVVEGRVPRRAVAD
                     LTEELRVGMQACFDEAQRLAGRPALPDPDPPGGPVSEGPGSEEPVS"
     gene            complement(1301..2056)
                     /gene="cmk"
                     /locus_tag="QGG16_02560"
                     /pseudo
     CDS             complement(1301..2056)
                     /gene="cmk"
                     /locus_tag="QGG16_02560"
                     /inference="COORDINATES: protein motif:HMM:NF014300.3"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
     gene            complement(1956..3254)
                     /gene="aroA"
                     /locus_tag="QGG16_02565"
     CDS             complement(1956..3254)
                     /gene="aroA"
                     /locus_tag="QGG16_02565"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: protein motif:HMM:NF012497.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003866 - 3-phosphoshikimate
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HJP24189.1"
                     /translation="MEPGGPLRGRTRVPGDKSISHRVLMLAALADGESTIHGLSDGGD
                     VACTRAIVEALGARVDAEEDPDGRQVLRIGGGRLGPAQSDLDVGNSGTGMRLLAGMLA
                     GLGFASTLDGDASIRRRPMDRVLEPLRAMGASVTGSGDGCALAPLVIDGGGLRGIEYR
                     LPMASAQVKGCVLFAGLSADGPTTVIEDQPSRAHTEELMAATGIDVERTHDNGLDRVT
                     VLPGRPTPFVHDVAGDPSQAAFWAVGASILPGSEVVIENVYAGPARSGFAAVLARMGA
                     DLFHDPVTSDLTVRAPSGGVLSATTVRADEVPGLVDEVPVLAVAAACADGETVFEGVG
                     ELRVKESDRLATIESELGRMGVDVRAEGDRLMVRGRAGGQLRGTSVDAHNDHRIAMAC
                     AVAALVADGSTTIDGWGAVATSYPTFSDHRVALLAGGIGA"
     gene            complement(3302..>3592)
                     /locus_tag="QGG16_02570"
     CDS             complement(3302..>3592)
                     /locus_tag="QGG16_02570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24190.1"
                     /translation="QRLETARTARISLPTGAPRPSELVEVRVPVLDQPGELASLTLLA
                     TDLDVNIYDLEIAHSAEGDRGVVLLIVEATQSERLCGGLMAKGYRPTTAPLA"
BASE COUNT          605 a         1346 c         1112 g          529 t
ORIGIN      
        1 cgatgccgcg accgatcgct ggccggacct ctggtcaccg ggccgcagcg acctctgctt
       61 cgccaccacc aatcgccagg gcgccctcct cgaactcgtg gaccggtgcg acgccgtcgt
      121 ggtgatcggc tcaaccaaca gctccaacac ccgtgcgctc gtccaactgg ccaccgaggc
      181 cggctgtccc cgcgtggtgt ggatcaatcg ggccgaggag cttcccgatg acctctccgg
      241 cactgttggg gtgaccgccg gggcatcagc gcctgaagag gtagtcgacg aagtgatccg
      301 ttcgttggcc ccgaccagcg gcgtcgagac ggtacgccat accgacgagg acgaatactt
      361 ccccccaccc cgcaacctgc gggacctcct ccatgcggta cgggggttcg ccgccgtggg
      421 cttctccgca ccggcgccga ctgttcacct cgacgaccgg gtgatcgatg cgtcggacgc
      481 gttggccgct ctggatcggc tccgaccggt cagctgacgg gctcttccga tccagggccc
      541 tccgagacgg gccccccggg cggatcgggg tcggggagcg ccgggcgacc agccagacgc
      601 tgggcctcgt cgaagcaggc ctgcatcccg actcgtagtt cctccgtcag atcggccacc
      661 gcacgtcgtg gcacccgacc ttcgacgacc ggtggacgga tcggctctcc aaccaccatc
      721 accactctga ccggtcggac catcggcgac ccacccggca tggcgtagtc ggtgccggcg
      781 attcccatgg gcacgagggg caccccagcc cggacggcca cgaaggccgg tccggcgcgc
      841 atgaggtcgg ccctcaccac cgggccgtgc tggcgcgtcc cctcggggaa catcaccatg
      901 ggttcacctc gctcgaggac ttcctgacac gcacgcagag cggcccggtc cgctgtgccc
      961 cgctcgaccg ggaagccccc gacaatggtc aggaaacggc cggcgaaccg gttccgccac
     1021 aacgactcct tgcctaggaa tcgctgtcgc cgggccgtca ccatcccgcc gaccggcgta
     1081 tcgaggtacg accggtggac cggagtgagg atgtacgcct cctcggatgg caggttcgcc
     1141 ttaccaacca cccggaaccg gaaccagacc ttgcacagca accagagagc tgaccagcag
     1201 acccggtagg ccacgccgtc aaccaacgac atcttccggc cgaggtcgga gttccccgtc
     1261 tcaccggtcg gattttccgt cgggtctcct gactggtcgg tcaccggagc atctcgacga
     1321 tggcgtccac agcgccgtcc accgtcagtt ccgaggtgtc caggacccgg gctccgtcgg
     1381 cggtaaccag cggactggca tcccggctgg aatccgcttc gtcgcggcgc cggatatcgg
     1441 ctgccaccga gtcgacattg acgcccgggt cctcagcagc gcggcggcga gcccgaacct
     1501 ccggcgaggc ggtcaggtac accttcaact cggcgtccgg aaacaccacc gaaccgatgt
     1561 cacgcctcta cattacccct ccgccccgtt cgagcaccca ggcccgttgg cgggccacca
     1621 tctcaagacg aacctcggga ttggcggcca cggcactcac cgctccggtc acctccgggc
     1681 cccgaatcgc cgtcgacgca tcctcaccgt cgaccgtgca gtgggaccgg gtcacagcga
     1741 gtgtcacgtt ccgggccacg tcggccacct gaccggcatc ggtcgggtcg atccctgctc
     1801 ggagcacggc gtgggccaca cctcggtaca tggccccggt gtccaggtaa tggaggccga
     1861 gccgatctgc cacggctcgg gccacggtgg acttcccgga ccccgccgga ccgtcgatgg
     1921 cgatcacccg aggtaccccg gacccggcca ccggttcagg ccccgatccc gccggccaac
     1981 agggcgaccc ggtggtcgga gaacgtcgga taactggtgg ccacggcgcc ccagccgtca
     2041 atggtggtcg acccatcagc caccagggcg gccaccgcac acgccatggc gatccggtgg
     2101 tcattatggg cgtccaccga agtgcctcgt agctggccac cagctcgccc acgaaccatc
     2161 aggcggtcac cctcagcccg gacatcaaca cccatccggc ccaactcgga ttcgatggtg
     2221 gccagacggt cgctctcttt gacccgtagc tcgcctaccc cctcgaacac tgtctcgccg
     2281 tcggcgcacg ccgccgccac agccagcacc ggaacctcgt cgaccagtcc gggcacctca
     2341 tcagcccgca ccgttgtagc cgagagcacg ccacccgatg gagcacgcac cgtcaggtcg
     2401 ctggtcaccg gatcatggaa cagatcagca cccatgcggg ccagcaccgc cgcgaagccc
     2461 gaccgagccg gaccggcgta tacgttctcg atgaccacct cggacccagg gaggatcgac
     2521 gccccgacgg cccagaaggc ggcctgagag ggatcgccgg ccacatcatg gacgaagggg
     2581 gtcggccgac ccggtaacac ggtgacccgg tcaagcccat tgtcgtgggt ccgctcgacg
     2641 tcgatgcccg tcgccgccat gagctcctcg gtgtgggcac gacttggttg atcctcgatc
     2701 acagtggtcg gcccatcggc ggacaggccg gcgaacagta cgcatccctt cacctgggcg
     2761 ctggccatcg gcaaccggta ctcaatgcct ctcaggcctc ccccgtcaat gaccaacggt
     2821 gcgagagcac acccgtcccc actcccggtc accgacgccc ccatggcccg caacggctcc
     2881 agcacccggt ccatgggtcg ccgtcggatc gacgcatcgc catccagcgt cgacgcaaac
     2941 cccaacccgg ccagcattcc ggccaacagg cgcatgcctg tcccggagtt gcccacgtca
     3001 aggtcgctct gagcgggacc gagcctgccg ccaccgatac gaaggacctg acgtccgtcc
     3061 ggatcctcct cggcgtcgac ccgggcgccg agggcttcga caatggcccg tgtgcaggca
     3121 acgtcaccgc cgtcactgag gccatggatg gtcgactccc catcggccag ggctgccaac
     3181 atcagcaccc ggtgggagat ggacttgtcg cccggcaccc gggttcgccc ccggagcggg
     3241 cctccgggct ccatgatcat tggacctccc accatggtgg cgccgccacc cgtaggggca
     3301 ttcatgccag gggggccgta gttggtcggt accccttggc catcaggcca ccgcacaacc
     3361 gttcagactg ggttgcctca acgatcagga ggaccacgcc acggtcgccc tcggccgagt
     3421 gggcgatctc aaggtcgtag atgttcacgt cgaggtcggt ggccaacaac gtgagcgacg
     3481 ccagctctcc cggctggtcg agcaccggta cacggacctc caccagttcg gacggacggg
     3541 gtgccccggt cgggaggctg attcgggccg tgcgggcggt ctccagccgt tg
//
LOCUS       DASCMR010000100         3479 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000514803, whole genome shotgun sequence.
ACCESSION   DASCMR010000100 DASCMR010000000
VERSION     DASCMR010000100.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3479)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3479)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3479
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000514803"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..197
                     /locus_tag="QGG16_02575"
     CDS             <1..197
                     /locus_tag="QGG16_02575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoglyceromutase"
                     /protein_id="HJP24191.1"
                     /translation="RALCKELDGISDEDITDLNIPTGTPLRYDLDDVLRPLEAMPVLE
                     RSLDPEAARAAAEAVARQAG"
     gene            415..2649
                     /locus_tag="QGG16_02580"
     CDS             415..2649
                     /locus_tag="QGG16_02580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heterodisulfide reductase-related iron-sulfur
                     binding cluster"
                     /protein_id="HJP24192.1"
                     /translation="MTDTSAPDETTRRFRPNHAVIGLGVLVALFTAASGVASLVNEFH
                     DDSPITREVFANIPGPLKLAFYSVIPMLIVYGAVLFSYRVQNWQRGAPDDRSTKPANA
                     KRRFGDFRSGVYMQTLLREPAAGVMHALIYFPFLILLAVTTVLEINHQVPEGLKFLHG
                     DVYRAYTAVGDIAGVLYLIGVTWAVLRRYGPRRFRPYRIRIKSKPEHAAVLLIFLAIG
                     VTGFGAEAFRIALQDTAPGGHGADPETWSVVGYPLAMAIGEAEWLVDDVAGWHQGWWI
                     AHVASFMAFLALLPITMIRHMFTSPLNMYLKDRSRPKGAMKPMPNLMETELESFGAST
                     IEDFTWKQLLDTDSCTMCGRCTSVCPAHATGKPLDPREIVLKTGEVMAATGQTAVSPP
                     IGTDAEVTVPANWMFDRITNDELWSCTSCRACDEICPVNIEILDKILDMRRYLSLMES
                     DFPSELGAAYRSMENSGNPWGLSQSERADWVGDLEGIEVLDGGDPFEAEYLYWVGCAG
                     SFDDKNKKVSRAMATLMQRAGVSFSILGPAEMCTGDPARRSGNEYIFQMLAMQNVETL
                     DGMGVKKIITQCPHCFNTLANEYPQIGGHYEVVHHSQFLEWLIADGKLDMSDARLDER
                     VVYHDSCYLGRHNDVYSAPRNVIGSLAGIDLVEANRQGTKGMCCGAGGGRMFMEEHIG
                     KNINVERSQELLATGATRIATACPFCFIMIDDGVKGEGIDESDVKVGDIALHLLEALD
                     AGSE"
     gene            complement(2698..3264)
                     /gene="dcd"
                     /locus_tag="QGG16_02585"
     CDS             complement(2698..3264)
                     /gene="dcd"
                     /locus_tag="QGG16_02585"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009394 - 2'-deoxyribonucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HJP24193.1"
                     /translation="MILSDRTLREEIAAGRIVVEPFDDSCVQPSSIDLHLDHRFLVFR
                     NHTMGHIDVREDLTELTEQVEADEDDPFILHPGEFVLGSTSERVTVPDDLVARLEGKS
                     SLGRLGLLIHSTAGYVDAGWDGQLTLELSNVASLPITLYPGMKIGQISFVRMTTAADR
                     PYGSSELGSKYRGQEGPRPSRYWENFNR"
     gene            complement(3277..>3479)
                     /locus_tag="QGG16_02590"
     CDS             complement(3277..>3479)
                     /locus_tag="QGG16_02590"
                     /inference="COORDINATES: protein motif:HMM:NF012703.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="arginase family protein"
                     /protein_id="HJP24194.1"
                     /translation="NIEAGIEGFGIDQVTQLLRSVRGKNVIGGDVVCLMPTVDSPNAI
                     TSYRSMAVMFEILSLIADRAAG"
BASE COUNT          643 a         1151 c         1088 g          597 t
ORIGIN      
        1 tccgagccct gtgcaaggaa ctggacggca tctccgacga ggacatcacc gatctgaaca
       61 tcccgacggg cacgccactg cgctacgacc tggacgacgt cctccggccg ctggaggcca
      121 tgcctgtcct ggaacgatca ctggatcccg aggccgcccg ggccgccgcc gaggccgtgg
      181 cccgtcaggc cggctgaact ggcccctcga actggcccag aaaacgagcc gacacgcaac
      241 gggccggggt cctgctgatc tgtgggccgg gccgaaaggt catccgacga tcaccggctg
      301 gtccgacccg tttgcaaccg tcccgtttcc aaccggattg ggccgcccta ccagagttcg
      361 cggaggccag cggaagcgac cgtgataacc cgcgacagat agtctccggt cgccatgact
      421 gacacttctg cacccgacga gaccacccgg cggttccgcc ccaaccacgc cgtcatcggg
      481 ctgggcgtcc tggtcgccct gttcaccgcg gcatccggcg ttgcctcact ggtcaacgag
      541 ttccacgacg actccccgat cacccgcgaa gtcttcgcca acattccggg accgttgaag
      601 ttggccttct actccgtcat cccgatgctg atcgtctacg gggccgtcct gttctcctac
      661 cgagtccaga actggcagcg gggcgccccc gacgaccggt ccacgaagcc ggccaacgcc
      721 aagcggcgat tcggtgattt ccggtccggc gtctacatgc agaccctgct tcgggagccc
      781 gcagcaggcg tcatgcacgc cctcatctac ttcccgttcc tgatcctgct ggccgtgacc
      841 acggtgctgg aaatcaacca ccaggtcccg gagggcctca agttcctgca cggcgacgtg
      901 taccgggcct acaccgcggt gggcgacatc gccggtgtgc tctacctcat tggcgtgacg
      961 tgggcggtgc tgcggcgcta cggaccccgc cggttccggc cctatcgcat ccgcatcaag
     1021 tccaagccgg agcacgccgc ggtgctgctc atcttcctgg ccatcggtgt caccggcttc
     1081 ggcgccgagg cgttccgcat cgccctgcag gacaccgccc ccggcgggca cggtgccgat
     1141 cccgagacgt ggtcggtggt cggctaccca ttggccatgg ccatcggcga ggccgagtgg
     1201 ctagtcgacg acgtggccgg gtggcaccag ggctggtgga tcgcccacgt ggcctcgttc
     1261 atggccttcc tggccctgct gcccatcacg atgatccgtc acatgttcac gtcgccgttg
     1321 aacatgtacc tgaaggaccg gtcccgcccc aagggcgcca tgaaaccgat gcccaacctc
     1381 atggagaccg agttggagag cttcggtgca tcgaccatcg aggacttcac ctggaagcag
     1441 ctactggaca ccgactcgtg caccatgtgc ggccgctgca ccagcgtctg cccggcgcat
     1501 gccaccggca agccgctgga ccctcgagag atcgtgctca aaaccggcga ggtcatggca
     1561 gctaccggcc agacggcagt gtctcccccc atcgggaccg atgccgaggt caccgttccg
     1621 gccaactgga tgttcgaccg catcaccaac gatgagctct ggtcgtgtac gtcgtgtcgg
     1681 gcgtgtgacg agatctgccc ggtcaacatc gaaatcctgg acaaaatcct ggacatgcgt
     1741 cgctacctgt cgcttatgga gtctgacttc cctagcgagt tgggagcggc ctaccggtca
     1801 atggagaact cgggcaaccc gtggggcctg tcccagagcg agcgggctga ctgggtgggc
     1861 gacctggagg gcatcgaagt gctcgacggc ggcgacccct tcgaggccga gtacctctac
     1921 tgggtgggtt gcgccggatc gttcgacgac aagaacaaga aggtctcacg ggcgatggcc
     1981 acgctcatgc agcgggccgg tgtgtcgttc tcaatcctcg gtccggccga gatgtgcacc
     2041 ggcgacccgg cccgacgatc aggcaacgag tacatctttc agatgctggc catgcagaac
     2101 gtcgagacgc tcgacggcat gggcgtcaag aagatcatca cccagtgccc gcactgcttc
     2161 aacacgctgg ccaacgagta cccgcagata ggcgggcact acgaggtggt gcaccacagc
     2221 caattccttg aatggctgat cgccgacgga aagctggata tgagcgatgc ccgactcgac
     2281 gagcgagtcg tgtaccacga ctcctgctac ctgggtcgcc acaacgacgt ctactcagcg
     2341 ccccgcaacg tgatcggaag cctggccggc atcgatctgg tggaagccaa ccgccagggc
     2401 accaagggga tgtgctgcgg tgcgggtggc ggccgcatgt tcatggagga acacatcggc
     2461 aagaacatca acgtcgaacg ctcacaggaa ctactggcca ccggcgcgac acgcatcgcc
     2521 acagcgtgtc cgttctgctt catcatgatc gacgacggcg tgaagggtga aggcatcgac
     2581 gagtccgacg tgaaggtggg cgacatcgcc ctacacctcc tcgaagcact cgacgccggc
     2641 tccgagtagc gggttcccca acggcaagct ccctcgtcac gagcgcccgc ccgcgaatca
     2701 gcggttgaag ttttcccagt agcgactagg tcgcgggcct tcctggcccc ggtacttcga
     2761 cccgagctcg cttgacccat agggtcgatc ggccgccgtg gtcatccgga cgaacgagat
     2821 ttgtccaatc ttcatgcccg gatagagggt gatggggagg ctggccacgt tggacagctc
     2881 aagggtgagc tgtccgtccc agccggcgtc cacgtaaccg gccgtcgagt ggatgagcag
     2941 ccctagtcgt ccgaggctcg acttgccctc cagacgggcc accagatcat cggggacggt
     3001 gacgcgttcc gaagtagagc cgagcacgaa ctcacccggg tggaggatga acggatcgtc
     3061 ctcgtcggcc tcaacctgct cggtgagctc agtgaggtcc tcgcgaacgt cgatgtggcc
     3121 catggtgtga ttgcggaaca cgaggaaccg gtgatcgagg tgtaggtcga tcgacgacgg
     3181 ctgtacgcag gagtcgtcga acggctcaac cacgatgcgg cccgcggcga tctcctcacg
     3241 gagggttcgg tcggagagga tcatgcggcg ctgatgctac ccagccgccc ggtcggcaat
     3301 gagcgagagg atctcaaaca tcacggccat cgaccggtaa ctggtgatgg cgttgggtga
     3361 gtcgacggtc ggcatgaggc acaccacgtc gccaccaatc acgttctttc cccgtaccga
     3421 ccgtaggagt tgagtgactt ggtcgatgcc aaagccctcg atgccggcct cgatgttgg
//
LOCUS       DASCMR010000101         2723 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000516009, whole genome shotgun sequence.
ACCESSION   DASCMR010000101 DASCMR010000000
VERSION     DASCMR010000101.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2723)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2723)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2723
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000516009"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..637)
                     /locus_tag="QGG16_02595"
     CDS             complement(<1..637)
                     /locus_tag="QGG16_02595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HJP24195.1"
                     /translation="MDTTSADDDSTMTVPTSPHAGPCTHHDHPRPPVSGVTLHWCDEQ
                     AEIHRIVVGDYENNVFVLRCRQTGQSVLIDAANEHDKLLELCRALNVQSVLETHGHWD
                     HIQAVPAVRAAGYRVAVTADDAAMLPSYDDLLEDETVLEVGRLRLHTICTPGHTPGSI
                     CFRLEGSPILFSGDTLFPGGPGNTTFEGGDFSTIIGSIDRRLFAPLPPETVV"
     gene            830..1945
                     /locus_tag="QGG16_02600"
     CDS             830..1945
                     /locus_tag="QGG16_02600"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP24196.1"
                     /translation="MNFAFSEEQEQLREFVRQFLENYSPETAVRELMETEVGYDAETW
                     SMMAEQLGLQSLVIPEEYGGQGFGYVELIVVLEEMGRALLCAPFFSTVVLAANTLIHA
                     GDEAAASALLPGIASGETIATLAFTEESGRWDEAGITMEASASDDAWTLSGSKMYVLD
                     GHIADLVLVAARTTNGVSLFHVAGDADGLTRTALATMDMTRKQARLDFDGVSATLIGA
                     EGAGWPVLERVLDLAAVALAAEQVGGAQICLDTAVQYAKDRVQFGRPIGSFQAIKHKC
                     ADMLLEVESAKSAAYYAGWCAAELNDELPSVASLAKAYCSEAYFHTTAENIQIHGGIG
                     FTWEHPAHLYFKRAKSSELLFGDPTYHRELLAQRIGI"
     gene            2041..2520
                     /locus_tag="QGG16_02605"
     CDS             2041..2520
                     /locus_tag="QGG16_02605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24197.1"
                     /translation="MTWFFLALGALLVVGIALIAVGSAVGRLSGTLRPAVLEIDDAAD
                     WIAERLPSEAAGQLSLDDVIAVVGWYLEVFDEAGLATEHGQELGDAAVDERPEVGNRT
                     AQLDGILEHVVARGLERSEPLDAVSVAMVAELLGTYLRELGAIGSPATPPGENPAQD"
     gene            2597..>2723
                     /locus_tag="QGG16_02610"
     CDS             2597..>2723
                     /locus_tag="QGG16_02610"
                     /inference="COORDINATES: protein motif:HMM:NF013530.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HJP24198.1"
                     /translation="MIDRSAPLFVAGHRGLVGSAIVRRLKDEGFTDLRTVGRDDLD"
BASE COUNT          452 a          854 c          931 g          486 t
ORIGIN      
        1 tgacgactgt ttcgggggga aggggagcaa acagccgtcg gtcaatggac ccgatgatgg
       61 tggagaagtc gccaccctcg aacgtggtat tcccgggacc cccgggaaac agggtgtcgc
      121 cgctgaacag aatcggtgaa ccttcgagac ggaaacagat ggaccccggg gtgtggcccg
      181 gcgtgcagat ggtgtgcagg cgaaggcgac ccacctcaag caccgtctcg tcctcgagaa
      241 ggtcgtcgta gctggggagc atcgccgcgt cgtcggctgt cacggccacc cggtaacccg
      301 cggcgcgcac ggcgggtacg gcctggatgt ggtcccagtg accgtgggtc tcaagtaccg
      361 actgcacgtt gagcgcccgg cagagttcaa ggagcttgtc gtgctcgttg gcggcgtcga
      421 tcaggaccga ctggccggtc tggcggcacc tcaacacgaa cacgttgttc tcgtagtcac
      481 cgaccacgat ccggtggatc tcggcctgct cgtcgcacca atggagggtc accccggaca
      541 ctggcggtcg gggatggtcg tggtgggtgc acggcccggc gtgcggtgac gtgggcaccg
      601 tcatggtgga gtcgtcatcg gcggaggttg tgtccatggt gagatcatga cactgagagt
      661 cctgtgacgg gcggccagtc ggcccgatgt cgtaccggtg ggggccgact ggtagaacga
      721 tgccatcgaa acggtccatc gggccgtcga tccagtcacg taacgccagt cattggccac
      781 atgccgctga ccacaaacca ccggccagca acaaacaggg agcatccaca tgaacttcgc
      841 attcagcgag gaacaggaac agctgcggga gtttgtccgc cagtttctcg agaactactc
      901 gccggagact gccgtccgtg agctcatgga gactgaggtc ggctacgacg ccgagacctg
      961 gtcgatgatg gccgagcagc tcggactgca gagcctcgtc atccccgaag agtacggcgg
     1021 tcagggcttc ggctacgtcg agctcatcgt ggtgctcgag gagatgggtc gggccctact
     1081 gtgcgccccg ttcttctcca ccgtggtgct ggctgccaac acgctcatcc acgccggtga
     1141 cgaggctgcg gcttcggctc tgctgcccgg tatcgcctcg ggtgagacca tcgccacgct
     1201 ggccttcacc gaggagagcg gccgttggga cgaggcgggt atcaccatgg aggcttcggc
     1261 cagtgatgac gcctggaccc tctcgggctc caagatgtac gtcctggatg gtcacatcgc
     1321 tgacctggtg ctggtggcgg cccgtaccac caacggtgtg tcgctgttcc acgtggccgg
     1381 tgacgccgat ggcctgaccc gcaccgcact ggccaccatg gacatgaccc gtaagcaggc
     1441 ccgcctcgac ttcgacggcg tgtcggccac cctgatcggt gccgaggggg ccggctggcc
     1501 ggtgctcgag cgggtactgg acctggctgc ggtggctctg gcggccgagc aggtcggtgg
     1561 cgcccagatc tgtctggaca ccgccgttca gtacgccaag gaccgcgtcc agttcggtcg
     1621 gcccatcggt tcgtttcagg ccatcaagca caagtgcgcc gacatgctgc tcgaagtgga
     1681 gtcggcgaag tcggccgcct actacgccgg ttggtgtgca gcagagttga acgacgagct
     1741 tccgtcggtg gcctcgttgg ctaaggcgta ctgctcagag gcctacttcc acacgacggc
     1801 tgagaacatc cagatccacg gcggcatcgg tttcacgtgg gagcacccgg cgcatttgta
     1861 cttcaagcgg gccaagagtt ccgagttgct gttcggcgac ccgacctatc accgggagtt
     1921 gctcgcccag cgaatcggaa tctgaatcac ggccctgatc cggggctaac agtccccgcg
     1981 tcctcatccc ggtgacggtc ctggcgccac cggcgtcggt cgtgctggca tgatccaacc
     2041 gtgacctggt tcttcctcgc cctcggcgcg ctccttgtcg tggggatcgc cctgatcgcc
     2101 gtgggttccg ctgtgggtcg actcagcggc acgttgcgcc ccgcagtgct ggagatcgac
     2161 gacgcggcgg actggatcgc cgagcggctc ccctccgagg cggccgggca gctcagcctc
     2221 gacgacgtga tcgccgtggt gggttggtac ctcgaggtgt tcgacgaggc cggtctggcc
     2281 accgagcatg gtcaggaact gggcgatgcg gcagtcgacg agcgtcctga agtcgggaac
     2341 cggaccgccc aactcgacgg gattctggaa cacgtggtgg cccgagggct ggaacgtagc
     2401 gagccgctgg acgccgtatc ggtggccatg gtggccgagt tgttgggcac ctacctccga
     2461 gagttgggcg ccatcggttc gccggccacg ccccccggcg agaacccggc tcaggactag
     2521 cgtcggccca tgaccatgcc cgtcgagttc gtcgaccacg ttgacggtgt cgaccgatga
     2581 ccgagccggt tcgcggatga tcgaccggtc agcgcccctg ttcgtcgctg gacaccgcgg
     2641 cctcgtcggc tcagcgatcg tccggcggtt gaaggacgag ggattcactg atctgcgaac
     2701 cgtcggccgt gacgacctgg acc
//
LOCUS       DASCMR010000102         1892 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000524984, whole genome shotgun sequence.
ACCESSION   DASCMR010000102 DASCMR010000000
VERSION     DASCMR010000102.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1892)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1892)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1892
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000524984"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..426
                     /locus_tag="QGG16_02615"
     CDS             <1..426
                     /locus_tag="QGG16_02615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HJP24199.1"
                     /translation="QAPWVERFVLEGQNSRLTAAALETMAIVAYKQPVSRAQVSAIRG
                     VDVDGVMRTLQQRGYIDEISRDPGPGNAVLFGTTREFLERMGIDTVDDLPPLGEFVPG
                     PEVVEALERGLRSDPALETPQPSLDGGPSDGSASAPPEG"
     gene            430..1212
                     /locus_tag="QGG16_02620"
     CDS             430..1212
                     /locus_tag="QGG16_02620"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020376823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HJP24200.1"
                     /translation="MAGSASAPTSGEDGSDRHEGERLQKVLARVGVGSRRTCEDLIAA
                     GRITVDGVVATLGRRVDPETALIEVDGAPIGVRPGLVHYLLNKPAGVVTTADDPQGRP
                     TVVGLVPDEPRVFPVGRLDADTEGLLLLTNDGELTHRLTHPSYGVEKEYVVEVQGVPT
                     RAVLRRLREGIDLEDGLTAPARAALLDASLVRLTIHEGRNRQVRRMCEAVGHPVLRLV
                     RTRIGPIVDRSLAPGAWRPLTGDEIRALGVAVATDPEVSPQN"
     gene            1257..>1892
                     /locus_tag="QGG16_02625"
     CDS             1257..>1892
                     /locus_tag="QGG16_02625"
                     /inference="COORDINATES: protein motif:HMM:NF014234.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004665 - prephenate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0008977 - prephenate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006571 - tyrosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase/arogenate dehydrogenase
                     family protein"
                     /protein_id="HJP24201.1"
                     /translation="MAAPDPATGTSGRATVVGIGLIGGSIGMALRARGWHVSGVDLDE
                     ATLAAAVDMGALDRVGWDVDAEVTFVATPVGQLATAVTEALAVAPTGLVTDVGSVKAP
                     VVDAVADARYIGGHPMAGSEQEGVDGADPEMFVNATWVLTPTAATNGDALARVRSVVA
                     SLGAEIITLPPDRHDSLVAIVSHVPHLTAAALMGIASARSTEHAAVLRLAAG"
BASE COUNT          275 a          614 c          684 g          319 t
ORIGIN      
        1 caggcgccgt gggtggagcg gtttgtcctg gagggccaga acagtcggct gacggcggcc
       61 gccctcgaga cgatggccat tgtcgcctac aagcagccgg tgtcgcgggc ccaggtttcg
      121 gccatccgtg gtgtggacgt cgacggcgtg atgcggacac tccagcaacg gggctacatc
      181 gatgagatct cacgggaccc gggtcctgga aacgccgtgc tgttcggcac caccagagag
      241 ttcctggagc ggatgggcat cgatactgtc gacgacctgc cgcccctggg ggagttcgtc
      301 cccggtcccg aggtggtcga agcgctcgaa cgtggactgc gttccgatcc agcgttggag
      361 accccccagc cttcactcga tgggggccct tctgatgggt ccgcgtcggc gccgccggag
      421 ggctgaacgg tggccgggtc ggcctctgct ccgacctctg gcgaggacgg gagtgaccga
      481 catgagggcg agcgtctcca gaaggtgctg gcccgtgtcg gcgtaggtag ccgccggacg
      541 tgcgaggacc tcatcgccgc cgggaggatc accgtggatg gtgtggtggc gaccctggga
      601 cgtcgggtcg acccggagac agccctcatc gaggtagacg gcgcaccgat tggtgtccgc
      661 cccggtctcg tccactacct cctgaacaag cccgccgggg tggtgaccac ggctgatgac
      721 ccgcaggggc gacccaccgt cgtcgggctg gtgcccgacg aaccccgggt gtttccggtc
      781 gggcgcctcg acgccgatac cgaggggctt ctcctcctga ccaatgacgg tgagctcaca
      841 catcggctca cacacccgtc gtacggcgtg gaaaaggagt atgtagtcga ggttcagggc
      901 gtaccgacga gagccgtgct ccgtcgcctg cgtgagggaa tcgacctgga agatgggctg
      961 actgctccgg cccgagccgc gttgctcgat gcgtcgctgg tgaggctcac cattcacgag
     1021 ggccgcaacc gtcaggtgcg acggatgtgc gaagcggttg gacatccggt gctccggctc
     1081 gtccggaccc gtattggtcc gattgtcgac cggtcattgg cgccgggggc atggcggccg
     1141 ttgacgggcg acgagatccg ggccctcggg gtggcggtgg cgaccgatcc tgaggtgtca
     1201 ccgcagaact gaatcctctc cgagggctga catcggcccc ggtagcatcg gcgtccatgg
     1261 cggctcccga tcctgcaact ggtacgtccg gtcgtgccac ggtcgtgggt atcggcctca
     1321 tcgggggatc gatcggcatg gccctacggg cccgggggtg gcacgtctcg ggcgtggacc
     1381 tcgacgaggc gacattggcc gccgctgtgg acatgggtgc gttggatcgg gtcggctggg
     1441 acgtcgacgc tgaggtgacc ttcgtggcca cccctgtcgg tcagctggcc accgcggtga
     1501 ccgaggccct cgccgtcgct cccaccggtc tggtgaccga cgtgggcagc gtgaaggcac
     1561 ctgtagtcga cgcggtagcc gacgctcgct acatcggcgg ccacccgatg gctggctccg
     1621 agcaggaggg cgtcgacggc gccgaccccg agatgttcgt gaatgccacc tgggtgctga
     1681 ccccgaccgc ggcgaccaac ggagacgccc tggcacgggt ccggtccgtg gtcgcgtcgt
     1741 taggcgccga gatcatcacc ctgccgcccg atcggcacga ctcgctggtg gccatcgtgt
     1801 cccacgtgcc ccacctcacg gccgccgcgt tgatgggcat cgcctcggct agatcgactg
     1861 agcacgccgc cgtgctgcgt ctggccgctg gg
//
LOCUS       DASCMR010000103         5220 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000530675, whole genome shotgun sequence.
ACCESSION   DASCMR010000103 DASCMR010000000
VERSION     DASCMR010000103.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5220)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5220)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5220
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000530675"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="QGG16_02630"
     CDS             <1..264
                     /locus_tag="QGG16_02630"
                     /inference="COORDINATES: protein motif:HMM:NF015735.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HJP24202.1"
                     /translation="VIHALDRAGAGDLRARTRSEHLSYVTQFDLAFGGPMLDDDGEMC
                     GSLIVVQAEDRAAAEAFAAGDPYAKAGLFEQVTITAMKPLLGN"
     gene            complement(331..1122)
                     /locus_tag="QGG16_02635"
     CDS             complement(331..1122)
                     /locus_tag="QGG16_02635"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJP24203.1"
                     /translation="MPFAMVNGQNIHYQDSGEPNSPAIILSHGFTMGHEMWEHQVTPL
                     VEAGWRVIAHDERGWGQTTFTEPFDYWDLAADVLGLMDHLGISEAVLAGMSQGGFLSL
                     RAALAAPERVRALVLVDTEAGVFSEEGRAGFQALFDAALTLGLSGDMGDALQMVLFGP
                     DFADARYWRGKWTAKPPSQWIAAKECLFERDSIVDRIGEITCPSITFHGDVDMGIDIA
                     QGRELAEGLGGPSTFVVVPGAGHSANLEKPEVVNPALLEFLASLD"
     gene            1234..2298
                     /locus_tag="QGG16_02640"
     CDS             1234..2298
                     /locus_tag="QGG16_02640"
                     /inference="COORDINATES: protein motif:HMM:NF012927.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alkene reductase"
                     /protein_id="HJP24204.1"
                     /translation="MDSLLAPAIFGEIELANRVVMAPMTRSRATVDGDATDLMAAHYG
                     VRATAGLIVTEGIAPSEVGKGYCRTPVLDGPHRLDGWRRITDAVHAGGGRIVAQAMHC
                     GRVAHAANKALGVETVAPSAIQAAGTMYTDAEGMMPFDEPRALTAAEVRCIVDEYRRF
                     AALSMEAGFDGVEVHATSGYLPAQFLCTGTNRRTDAYGGSLEGRIRFPVEILEAVSEE
                     IGAGRTGLRICPGNPFNDLVDDRPEDVEETFRAFLMALQPLRLSWLHVIRRHEGRLDN
                     LALARELHDGAVIANDSYDGPSADAAIASGKCDAVSFGRHYLATPDLVTRFGAGDQPD
                     PFDHRTLYTPGPAGYTELSG"
     gene            2365..2859
                     /locus_tag="QGG16_02645"
     CDS             2365..2859
                     /locus_tag="QGG16_02645"
                     /inference="COORDINATES: protein motif:HMM:NF024854.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HJP24205.1"
                     /translation="MNAATLGLLLTRLGRLNEQFLTDHHRRHGTTPAEAAVLLMLANT
                     TDEAVSPTVIADWIVQTSGGLTATLKRLEDRGWIERHPDPDDGRGRLVTLSESGRDAN
                     DAIFTDLVDRYSLVFVDTDTDSGLDAVRDLMRGFERLTGVTSSAWWTHPTDVSLTTTT
                     GSPR"
     gene            2856..3692
                     /locus_tag="QGG16_02650"
     CDS             2856..3692
                     /locus_tag="QGG16_02650"
                     /inference="COORDINATES: protein motif:HMM:NF014698.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HJP24206.1"
                     /translation="MTHIATEVLNLRPVSGRIGVEVVDADLDLLVKNQAARADLRRAL
                     LDHHVVVLRGLYPTPEEHIAIASAFGTPIAPEAHLPTHPDHPLVCRFDSAVGYKADKW
                     HTDGTFRDVIPSVAVLTMRTSPATGGDTVWANCCAAYEDLSNGMKILLDGRKALHDQG
                     PDAKAVHPVVVAHPDTGLPILFVNDIFARGIMNLPPEESNAILPFLIRHVSRPEFTYR
                     HSWSEGDVVIWDNRSTQHYALFDFAGQRVVERVHVSGGVMEAHRLEPDERRSPPATEG
                     PW"
     gene            3689..>5220
                     /locus_tag="QGG16_02655"
     CDS             3689..>5220
                     /locus_tag="QGG16_02655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24207.1"
                     /translation="MSVGYRNPYLADSENPIAHGRCDQQDCTELAAALPPEGADGEIL
                     TESDRQFTWLGPGHFGGLISGLYPDGKRTIWSNGRECIAKLDHDTLEVLARFDLSHER
                     PDEPSSTQADWEAGVAGLDADIDGDVDAPVVHAADLASRFMTGLDGIYSLLDNEHTLF
                     LGRKTGAVAYAETDPTDRSSPLAEKDRWDKPPEVEGFFVGINMTPDGRLVLSTDHGWL
                     VSLARDFSDHVAVQIPGAAEHAAEHCARMEIDRGNTGYGWVRTSLCCDDAGGVYVSSV
                     DHTHKVIWTGERFSFDAADGAWSAEYRNGTGRGSGTTPSLMGFGSDEDRFLVIGDGDD
                     VVNITLFWRDEIPDDWEQLPNAPSRRIAGLGAAHMGDPSRVEIQTEQSITVSGYGAMT
                     VNNEPGSRPDWLPARGARLLCFFLGHHKRFTPFGMHKYQWDPEAQTLREAWVTTEISS
                     PNSVPYVSQGSDTVYTCGTRNGKWTIEAVDWSTGESRGYWATGDSRFNTLGGGVHVDG
                     DGR"
BASE COUNT          965 a         1694 c         1645 g          916 t
ORIGIN      
        1 gtcattcatg cccttgatcg agccggtgcc ggtgacctgc gggcccggac ccgttccgaa
       61 cacctcagtt acgtcaccca gttcgatctg gcattcggtg ggccgatgtt ggacgatgac
      121 ggagaaatgt gtggatctct catcgtggtg caggccgagg atcgggcggc cgccgaggcg
      181 ttcgccgctg gggaccccta cgccaaggca gggctattcg agcaggtaac cattaccgcc
      241 atgaagcccc tcctggggaa ctgagtcttc cgaccacgtt cgccgaatat cgggctggtg
      301 aggagtgggc cggcccatcg acgcgctgag tcagtccagg ctggccagga actccagtag
      361 ggccgggttc acgacctcgg gtttctcgag gttggcgcta tgtccggcgc ccgggacgac
      421 tacaaacgtt gatggaccac ctagtccctc agcgagttcc cgaccttgag cgatgtcgat
      481 gcccatgtcg acgtcgccgt gaaacgtgat gctgggacac gtgatctccc cgatgcggtc
      541 gacgatcgag tcacgttcga acaagcactc cttggcggca atccactggc tgggtggctt
      601 ggccgtccac ttcccacgcc agtagcgggc atcggcgaaa tccggaccga agaggaccat
      661 ctggagggcg tcgcccatat cgccgctcaa gccaagagtc agtgcggcat cgaagagggc
      721 ttggaagcct gctcggcctt cttcggagaa gacacctgcc tcggtgtcga ccaacaccag
      781 ggcacggacg cgctcggggg cggcaagggc ggcccgcagc gacaggaagc caccctggga
      841 catgccggcc agcacggcct cagagatgcc cagatggtcc atgaggccca acacgtcggc
      901 ggctaaatcc cagtagtcga acggttcagt gaacgtggtt tggccccagc cccgctcgtc
      961 gtgggcaatg acccgccagc cggcttcaac caagggggtg acctggtgct cccacatttc
     1021 atggcccatg gtgaagccat ggctcaagat gatggccggc gagttcggtt cacccgaatc
     1081 ctgatagtgg atgttctggc cgttgaccat tgcgaatggc atggatcctc ccgcgttgtc
     1141 cggatcggtt cgctggcagc ggaccgaatc atgtcctcca tttacggtag ccacctggcc
     1201 gacaaggggt ttgagggacc ctagattcag gggatggatt ccctgctggc ccccgccata
     1261 ttcggtgaaa tcgaactggc caaccgggtg gtcatggccc ccatgacccg ctcgcgggcc
     1321 accgtcgacg gcgatgccac cgacctgatg gccgcccact acggggtccg ggccacagcg
     1381 gggttgatcg tcaccgaggg gatcgctcca agcgaggtgg gcaagggcta ctgccggacc
     1441 ccggtgcttg acggaccgca ccgcctcgac ggttggcgcc ggatcaccga cgccgtccac
     1501 gctgggggcg gccggatcgt ggcacaggcc atgcactgtg gccgggtggc ccacgcggcc
     1561 aacaaggcac ttggcgtcga aacggtggcg ccgtcggcca ttcaggcggc cgggaccatg
     1621 tacaccgatg ccgaggggat gatgcccttc gatgagccac gtgcgctcac cgccgccgag
     1681 gtgcgttgca ttgtcgatga gtaccgtcgg ttcgctgcgc tatcaatgga ggctggcttc
     1741 gacggggtgg aggtgcacgc caccagtggc tacctcccgg cccagtttct gtgcacgggc
     1801 accaaccgcc ggacagacgc ctacggcggg tcgctcgaag ggcggatccg gttcccggtc
     1861 gagattcttg aggcggtgtc cgaagagatc ggtgcgggac ggaccggcct acgaatctgt
     1921 cctggcaacc cgttcaacga cctggtggat gaccgtcccg aggatgtcga ggagacgttc
     1981 cgggcgtttc tcatggccct ccagcctctc cggctctcct ggctgcacgt gatccgccga
     2041 cacgaggggc gcctcgacaa cctggcgttg gcccgggagc tacacgacgg cgcggtcatc
     2101 gccaacgact cctacgacgg tccgtcagcc gatgcggcga tcgcctcggg gaagtgcgac
     2161 gccgtatcgt tcggtcgcca ctatctggcc accccggacc tagtgacccg cttcggcgcc
     2221 ggtgaccagc cagacccgtt cgatcaccgg acgctgtata cgcctgggcc tgccgggtac
     2281 acggaacttt caggatgatc gtacgtaagg gcaagtcagg agatcaatct tgctaccaag
     2341 gtaaatgctt tctagggtgc tcgtatgaac gcagcgaccc tcgggcttct cctgacccgg
     2401 ctcggacgtc ttaacgaaca gttcctgact gaccaccacc gtcgccacgg cacaacgccc
     2461 gcagaggcag cggtgctact gatgctggcc aacacgaccg atgaggcggt tagcccgacg
     2521 gtcatcgccg actggatcgt tcagacctcc ggtggcctca cggccaccct caaacgactc
     2581 gaggatcgag gctggatcga gagacatccc gaccccgacg atggacgagg acgtctggtg
     2641 accctttccg agagcggacg ggacgccaac gacgcgatat tcaccgacct agttgaccgc
     2701 tacagcttgg tgttcgtcga taccgacacc gacagcggtt tggacgctgt tcgcgatctc
     2761 atgcgcggct tcgaacgcct aaccggcgtc acttccagcg cctggtggac ccacccgacc
     2821 gacgtatccc tcaccacgac caccgggagc cctcgatgac ccacatcgct accgaagttc
     2881 tgaacctccg gcccgtgtca ggacggatcg gcgtcgaggt ggtcgacgcc gacttggact
     2941 tgctggtcaa gaaccaggcc gcccgggctg acctacgtcg ggcactactg gaccaccacg
     3001 tggtggtcct tcgaggcctc tacccgactc cagaagagca catcgccatc gcctcggcgt
     3061 tcggtacccc gatagccccc gaggctcacc tgcccacgca tccagaccac cctttggtct
     3121 gccgattcga cagcgccgtg ggatacaagg ccgacaagtg gcataccgac ggcacatttc
     3181 gcgacgtcat tcccagcgtg gccgtgctca ccatgcgtac ttcgccggcg acaggtggag
     3241 acaccgtgtg ggccaactgc tgtgcagcct acgaggacct ctcgaacggc atgaagatcc
     3301 ttctcgatgg gcgcaaggcc ctgcacgacc aaggccccga cgccaaggcc gtccatccgg
     3361 tagtggtggc ccacccagac accggtctgc caatcctgtt cgtcaacgac atattcgcgc
     3421 gggggatcat gaatctgcct cctgaggaga gcaatgcaat cctgccgttt ctgatccgtc
     3481 acgtaagccg tccggagttc acttaccggc acagctggtc ggagggcgac gtggtcatct
     3541 gggacaaccg cagcacccag cactacgccc tgttcgactt cgctggtcag cgggttgtcg
     3601 agcgggtgca tgtgtccggt ggcgtcatgg aagcacaccg gctcgaaccc gacgagcgcc
     3661 gcagcccgcc ggcgaccgag ggaccctggt gagcgtcggc taccgcaacc cgtacctggc
     3721 ggatagcgag aacccgatcg cccacggacg atgtgaccag caggattgca cagaactggc
     3781 cgcggcgttg cctcccgaag gcgctgacgg cgagatcctg actgaatccg atcgccagtt
     3841 cacttggcta gggccgggcc acttcggggg tctgatctcg ggcctgtacc ccgacgggaa
     3901 gcgcaccatc tggagcaacg gacgcgaatg cattgccaaa ctcgaccacg acacactcga
     3961 ggtgttagcc cggttcgacc tctcccatga aagacccgac gagccatcca gcacgcaggc
     4021 cgactgggag gctggggttg ccggtctcga tgctgacatt gacggggacg tcgatgcccc
     4081 ggtcgttcat gccgctgacc tggcctcacg gttcatgacc ggcttagacg ggatctactc
     4141 cctactggat aacgaacaca ccctcttcct gggtcgcaag actggtgcgg ttgcgtacgc
     4201 cgagacggac ccaactgacc gcagttcccc actggccgag aaggaccgtt gggacaaacc
     4261 gccggaggtc gaggggttct tcgtgggaat aaacatgacc cccgacggtc gccttgtcct
     4321 gtcgactgac catgggtggc tggtcagcct ggcccgggat ttctcagacc acgtggccgt
     4381 tcagatcccc ggtgccgcgg agcacgccgc cgaacactgc gcccgcatgg agatcgaccg
     4441 gggcaatacc ggctacggct gggtccgtac gagtctgtgc tgtgacgacg ccggcggggt
     4501 ctacgtgagt tctgtcgacc acacccacaa ggtgatctgg accggcgaac ggttctcgtt
     4561 tgatgcggct gacggggcat ggagcgctga ataccgaaac ggcactggtc gcggttcagg
     4621 gactacgccg tcgctcatgg gcttcggttc cgacgaggat cggttcctcg tcattggcga
     4681 cggtgacgac gtagtcaaca tcacactgtt ttggcgagac gagatccccg atgactggga
     4741 gcagctgccc aacgcaccgt cgagacggat cgccgggctg ggcgccgccc acatgggtga
     4801 tccgtctcgt gtagagattc agacagaaca gtccatcacc gtgtccggct acggcgccat
     4861 gactgtcaac aacgagcccg gatcgcgccc cgactggctg ccggcccgtg gtgcccgcct
     4921 gctgtgcttc ttcctaggtc atcacaaacg atttaccccg tttggaatgc acaagtacca
     4981 gtgggaccct gaggcccaga cgttgcggga ggcctgggtg accaccgaga tcagctcgcc
     5041 caactcggtg ccctacgtca gccagggttc cgacaccgtc tacacgtgtg gcacccgtaa
     5101 tggaaagtgg accatcgagg ccgtcgactg gtcgaccggc gagtcacgcg gctactgggc
     5161 gaccggtgat tcacgattca acaccctcgg gggcggagtg cacgtcgacg gggacggccg
//
LOCUS       DASCMR010000104         2971 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000535606, whole genome shotgun sequence.
ACCESSION   DASCMR010000104 DASCMR010000000
VERSION     DASCMR010000104.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2971)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2971)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2971
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000535606"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            56..499
                     /locus_tag="QGG16_02660"
     CDS             56..499
                     /locus_tag="QGG16_02660"
                     /inference="COORDINATES: protein motif:HMM:NF013331.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="globin"
                     /protein_id="HJP24208.1"
                     /translation="MTSQSVPMGRQKPWVRIGADSTEIVADTLFELVGPAWLDDLAGR
                     FYDGVAADPVLRPLYPDDLAGPAARLAGFLRQYWGGPADYSVERGHPRLRMRHAPFVI
                     ASVQRDAWLACMSTAVAGGGLTRSAESAVMEYFLNAAQHLVNAPD"
     gene            701..1021
                     /locus_tag="QGG16_02665"
     CDS             701..1021
                     /locus_tag="QGG16_02665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012229432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0030527 - structural constituent of
                     chromatin [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HJP24209.1"
                     /translation="MNKSDVIAAMADRAGTSNKDAGACLDAFFDVVADAVAAGGDKVS
                     IPGWISFEQVHRAARMARNPQTGEPVHVAARNACKVSVGSKLKAAANSGGGAAEAAPE
                     PSSW"
     gene            1152..1586
                     /gene="fabZ"
                     /locus_tag="QGG16_02670"
     CDS             1152..1586
                     /gene="fabZ"
                     /locus_tag="QGG16_02670"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HJP24210.1"
                     /translation="MSDILLPPEAVIPHRDPFLLLTEVTEVTSGERAVGYWDLTGDEP
                     FFAGHFPDRPTLPGVLMCESIAQLGAYALLSRPDFVGRLALFGGLDGVRFRRQVVPGE
                     RLDLEVELGRVSARAGKGTGRASVDGEEACRCELMFVFVGTD"
     gene            complement(1626..2798)
                     /locus_tag="QGG16_02675"
     CDS             complement(1626..2798)
                     /locus_tag="QGG16_02675"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HJP24211.1"
                     /translation="MTRRRVAVTGLGVVSTCGVGTDAFWNGLCGPAPEGDRLVPDFDP
                     SPWFENPKEVRRSDRCTQFAIAASDMALEQAGELTADPTRRGVFIGTGIGGIQTLEDQ
                     ILVMNEKGSRRVSPFLIPMMMPNAAPAAVSMKHGFQGPAENTCTACAAGTHALANAAR
                     LIAYGRCDVVLAGGSEAPFVDAAVAGFTNMTAFSSVGISRPFDAERDGFVMGEGAGVV
                     VLEDWETAEARGATILAEILGGASTADAHHITAPSPGGVGAINCMRLALEEAGVDAAD
                     VVHINAHGTSTPLNDMAEAFAMQEVFGDNGPQITSTKGITGHALGAAGAIEAVAVILA
                     LQKGLIPPTSGYATPDPEMPAINIVAGEPAPWTPGISMSNSFGFGGHNGSLVIGPA"
     gene            complement(2798..2959)
                     /locus_tag="QGG16_02680"
     CDS             complement(2798..2959)
                     /locus_tag="QGG16_02680"
                     /inference="COORDINATES: protein motif:HMM:NF002148.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000035 - acyl binding [Evidence IEA];
                     GO_function: GO:0000036 - acyl carrier activity [Evidence
                     IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HJP24212.1"
                     /translation="MEASFAEDLDADSLDLVELVMALEEEFGVNVEEEELEDITTIGG
                     AYQLITGKL"
BASE COUNT          510 a          894 c         1006 g          561 t
ORIGIN      
        1 ggacttccga gccgccctcg acgccggttg actccttgtt agcgaccaac tgaacatgac
       61 cagtcagagc gttcccatgg ggcgacaaaa gccttgggtg cggatcggag ccgacagcac
      121 agagatcgtg gccgacacac tcttcgaact ggtggggcca gcgtggttag acgacctagc
      181 cggccgattt tatgatggag tggcggcgga ccccgtacta cgacccctgt atcccgacga
      241 cctggccggc ccggctgctc ggctcgccgg cttcctacgc cagtattggg gtggccccgc
      301 cgactacagc gtcgagcggg gacaccctcg actgcggatg cgtcacgctc cctttgtcat
      361 cgcctcggtc caacgggacg cctggctggc ctgcatgtcg accgcggtcg ccggcggagg
      421 tctcacccgg tccgctgaat cggcagtgat ggagtacttc ctgaacgcgg cccagcactt
      481 ggtgaacgct ccagattgac tttgtcgcgt ctctacagag gccggaggac cgtctgaaaa
      541 ggctcgttgt cattcccgac ggacccacag ctcggaggca gatccttgga acgaaaggcc
      601 ttcaggatcg gaaatgcttg acattgggtg ctgaaagtag tcggatgtca tttgaccacg
      661 aggtgggcag acccatcccg agacccaaag gagatggtcg atgaataaga gcgatgtaat
      721 cgcagcaatg gcggaccggg ctgggacgtc caacaaggac gcaggtgcgt gtctggatgc
      781 cttcttcgat gtggtggctg atgcggtggc tgccggtggt gacaaggtgt cgattcccgg
      841 ctggatttcg tttgagcagg tccatcgggc ggctcggatg gcccgcaacc cgcagaccgg
      901 cgagcctgtt cacgtggcgg cccgtaacgc ctgcaaggtg tctgtcggct cgaagttgaa
      961 ggctgctgcc aacagcggtg gtggagcggc cgaggcggcg cccgaacctt cctcctggtg
     1021 agcactgcgg gtcgcctaat gcgactcgac atcatctgag aagttggccg aggccggggt
     1081 ggcgacaccc cggcctcgtg catttcggcc cactgacaga ttctcgacca tgtccggaag
     1141 gaacctccaa cgtgtccgac atcttgctgc cacctgaggc ggtcatccca caccgtgatc
     1201 cgttcctctt gttgaccgag gtcaccgagg tgacctcggg ggagcgggcc gtcggttact
     1261 gggacctgac cggtgatgag cctttctttg ctggacattt ccctgatcgg ccgacgcttc
     1321 ccggcgtttt gatgtgtgaa tcgatcgcac agttgggggc ttatgcccta ctaagccgcc
     1381 cggactttgt cggtcgtctg gctcttttcg gtggtcttga cggggttcgg ttccggcggc
     1441 aggtggtacc gggagagcga ttggacctgg aggtggagct gggtcgggtg tcagccaggg
     1501 ccggcaaggg cacaggacgg gcgtctgtgg acggtgagga ggcgtgccgg tgtgagctga
     1561 tgttcgtctt cgtgggtact gactgaccaa cgcatgggtc tctggctggc tgaccggggc
     1621 cgggactaag cggggccgat aaccagactg ccattgtggc cgccgaaccc aaacgagttg
     1681 gacatggaga tgccgggtgt ccaaggtgcg ggttcaccgg cgacgatgtt gatcgccggc
     1741 atttctggat cgggcgtggc gtagcccgat gttggtggga tcaggccctt ctgcagggcc
     1801 aggatcaccg caacggcctc aatggcgccg gcggccccta gagcgtgacc ggtgatcccc
     1861 ttggtggagg tgatctgcgg gccgttatcg ccgaacacct cttgcatggc gaaggcctcg
     1921 gccatgtcgt tcagcggggt cgacgtgccg tgggcattga tgtggaccac atcggcggca
     1981 tccactccgg cctcttcgag ggccagacgc atgcagttga tggctcccac accgccaggt
     2041 gacggggcgg tgatgtggtg ggcgtcggcc gtgctagcgc cgcccaggat ctcggccaga
     2101 atggtcgccc cgcgagcctc ggcggtctcc cagtcttcca gcacgaccac gccagcgcct
     2161 tcgcccatga cgaagccgtc gcgctccgcg tcgaacggtc gggaaatccc gaccgacgag
     2221 aaggccgtca tattggtgaa gccggccacg gctgcatcca cgaatggggc ctcgcttcca
     2281 ccggctagga ccacgtcaca acgtccgtag gcgattagac gggcggcatt ggccaaggcg
     2341 tgtgtaccgg cggcgcacgc cgtgcaggtg ttctcggcgg ggccctgaaa gccgtgcttc
     2401 atcgacacgg cggccggggc ggcattgggc atcatcatgg ggatgaggaa cggagatacc
     2461 cgtcgagagc ccttttcgtt catcacgagg atctggtcct cgagggtttg gatgccaccg
     2521 atgccggtac cgatgaacac accacgacgg gtcggatcgg cggtcagttc accggcttgc
     2581 tctagggcca tgtcagacgc agcgatggcg aactgcgtac agcggtcact gcgacggacc
     2641 tccttagggt tctcgaacca cggggaggga tcgaagtcgg ggaccaggcg gtcgccttcc
     2701 ggggccggac cacacaggcc gttccagaac gcgtctgtgc cgacgccgca cgtggagacc
     2761 acgcccaggc cggtgacggc cacccgacga cgggtcatca gagcttgccg gtgatgagct
     2821 ggtaggcgcc cccgatggtg gtgatgtcct ccagttcctc ctcctcgacg ttgacgccaa
     2881 actcctcctc aagggccatg accaactcga cgaggtcgag gctgtcggca tcgaggtcct
     2941 cggcgaacga agcctccatg gtgacctggt c
//
LOCUS       DASCMR010000105         2676 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000536203, whole genome shotgun sequence.
ACCESSION   DASCMR010000105 DASCMR010000000
VERSION     DASCMR010000105.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2676)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2676)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2676
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000536203"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..190
                     /locus_tag="QGG16_02685"
     CDS             <1..190
                     /locus_tag="QGG16_02685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24213.1"
                     /translation="GTRNGKWTIEAVDWSTGESRGYWATGDSRFNTLGGGVHVDGDGR
                     IIFGSIFGKTRILASPRD"
     gene            276..1226
                     /locus_tag="QGG16_02690"
     CDS             276..1226
                     /locus_tag="QGG16_02690"
                     /inference="COORDINATES: protein motif:HMM:NF019474.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJP24214.1"
                     /translation="MSIRSRLLRPTMRWFVLGSDNSLEKLRTGLERFGRFTRRNVADW
                     SEVAVGGLPSIRVTPRSEPSNIHILYLHGGAYNLGSPSSHLGLVSQIVMRLGATATVV
                     DYRLAPEHPYPAAIEDCITAYRALLEEVNPSSLVVAGDSAGGGAALATMIALRDAGDP
                     LPACLYLMSPWTDLTRSGESYQTMSTVDPLVPPGGIDSHLGLMDDLVDGYRGAEDASH
                     PGISPLFADLGELPPILVQVGSDELLLSDSTVLAERAEAAGVDVELDVADGMWHVWQF
                     LAPWLPEARWALDKAATYIRKRAMVDGRSGGTLVTRSPDH"
     gene            1303..>2676
                     /locus_tag="QGG16_02695"
     CDS             1303..>2676
                     /locus_tag="QGG16_02695"
                     /inference="COORDINATES: protein motif:HMM:NF013434.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJP24215.1"
                     /translation="MERALDRRAEALGTLDGGTFDVIVVGGGINGAVSALALAAHGLS
                     VALVERNDFGSGTSQESSCMVWGGFKYLESRDLKLVAGLCDSRNRLASAYPTRLVETR
                     FMAALDRGAPFPPWFAALGAVAYWGLGRLATQPPRHRSAATIERLEPSVDTSMVRGGI
                     EYSDYLLVDNDARFVSELAIGSTRHGATIANRVEVLDAEPGVGGWQIAMRDRVSGRDL
                     EATARVVVNAGGPDVPVVGELLGAVTEHRLVFSKGIHLVVPRITDSGRILAFFDDDER
                     LFYVLPMGERSVIGTTDTPVNDPQVTVTAEDRAFLLEQINARIDRGTPLGEADVIAER
                     CGVRALVVPPGGSAEGRDWTELSREHAVEVDATLGVVSVLGGKLSDCLNVGEEVVEAA
                     AACGLSGRRPVRRWYGEPGRTARRRYDERAADLQLAPGVIADLWRRQGMRAFAALDLI
                     ATDRSLGE"
BASE COUNT          440 a          814 c          892 g          530 t
ORIGIN      
        1 tggcacccgt aatggaaagt ggaccatcga ggccgtcgac tggtcgaccg gcgagtcacg
       61 cggctactgg gcgaccggtg attcacgatt caacaccctc gggggcggag tgcacgtcga
      121 cggggacggc cgaatcatct tcggctccat cttcggtaag actcggatac tcgccagtcc
      181 tcgagactga ttgcggcccc cctggctgaa gatcggggcc agaacgcccc tgggttagcg
      241 tgacttcgtc gccagccccg gccacggagg acctcatgag tattcgatcc aggctcctgc
      301 ggcccaccat gcggtggttc gtcctagggt ccgacaactc tctggagaaa cttcgcaccg
      361 gactcgagcg gttcggacga ttcaccaggc gcaacgtggc cgactggtcg gaggtcgccg
      421 tcggggggct cccctccatc cgggtcacgc cccggtctga gccgtcgaac atccacatcc
      481 tctacctgca cggcggggcc tacaacctgg gttcaccgtc tagtcacctc ggcctggtct
      541 cccagatcgt catgcgcctc ggggcgacgg ccaccgtggt cgattatcga ctggcccctg
      601 aacaccccta cccggcagcg atcgaggact gcatcactgc ttatcgggcc cttctcgaag
      661 aggtcaaccc atcctcgttg gtagtggcgg gtgactcggc cggtggtggt gccgccctgg
      721 ccaccatgat tgcacttcga gatgccggcg acccactacc ggcttgtctc tacctcatgt
      781 caccgtggac cgacctcacg cgctcagggg agagctacca gacaatgagc acggttgatc
      841 cgctcgtgcc gcctggaggc atcgattcgc atcttgggct gatggacgat ctggtcgatg
      901 gttaccgggg tgctgaggac gcgagccatc cgggaatctc gccgctgttc gccgatctgg
      961 gcgaactgcc gccgatcctc gtgcaggtgg ggagcgacga gttgctgtta tcagactcaa
     1021 cggtgctggc cgagcgggcc gaggcagccg gggtggatgt tgaactggac gttgccgatg
     1081 gcatgtggca cgtctggcag ttcctggccc cgtggctgcc tgaggcgcgt tgggcgctcg
     1141 acaaggctgc gacctacatt cggaaacggg ccatggttga tggccggtcc ggtggcactt
     1201 tggtgacccg gtcgccggat cattaagcag ccacttcggc cggtcttcgg acagatgccc
     1261 cgtcggtgtc gattgccgga cggaagcggt tacaactaac ccgtggaacg agcactagat
     1321 cgtcgcgccg aggcgctcgg caccctggat ggcggcacgt ttgacgtcat cgtcgtgggc
     1381 ggtggcatca acggcgccgt ctctgccctc gctctggcgg cccacggact aagcgtcgcc
     1441 ctggtggaac gaaacgactt cggttcaggc accagtcagg agtcgtcgtg catggtgtgg
     1501 ggcggtttca agtacctgga gagccgcgac ctgaagttgg tggccggcct gtgcgactcc
     1561 cggaatcgac ttgcaagtgc ctacccaacg cgtctcgtcg agacccggtt catggcagcc
     1621 ctggaccgtg gggcaccctt tccaccctgg ttcgctgcac ttggtgcggt ggcgtattgg
     1681 ggtcttggac gcctagccac tcagccgccc cgccaccgat cggcggccac tattgaacgc
     1741 cttgagccat cagtggatac ctcaatggtt cgaggcggca ttgagtactc cgactacctc
     1801 ttagtggaca atgacgcccg gttcgtgtcc gaactggcaa tcgggtcaac gcgacatggg
     1861 gccaccattg ccaaccgagt cgaggtgctg gacgctgaac cgggagtggg tggttggcag
     1921 atcgccatgc gtgaccgggt ttctggccgt gacctagagg ccaccgcccg ggtggtggtc
     1981 aatgctggcg gacccgatgt gcccgtagtc ggtgagctct tgggagcggt caccgagcac
     2041 cgtctggtct tctccaaggg catccacctg gtggtgcccc ggatcaccga ctcgggtcgg
     2101 attctggcct tctttgacga tgacgagcgg ctcttctacg tgctgcccat gggggagcga
     2161 tccgttatcg gtaccaccga cactcccgtc aatgacccgc aggtaaccgt taccgccgaa
     2221 gatcgggcgt tcctgttgga gcagatcaat gcccgtattg atcgggggac gccattaggg
     2281 gaagccgacg tgattgccga acggtgtgga gttcgggctc ttgtggttcc gccgggcggt
     2341 tctgccgagg gacgagactg gacggaactg tcacgggaac acgccgtgga ggtggacgcg
     2401 acccttggcg tggtttcggt actgggaggg aagctctcag attgcctcaa tgtaggtgag
     2461 gaggtagtgg aggccgccgc tgcctgtggt ttatcgggtc gcagaccggt gcggcggtgg
     2521 tatggcgagc caggcagaac ggctcgtcgt cgttatgacg aacgggccgc tgacctccag
     2581 ttggccccgg gcgtgatcgc cgacctgtgg cgtcggcagg ggatgcgagc gtttgctgcc
     2641 ctcgacctga ttgctaccga tcgatcccta ggtgaa
//
LOCUS       DASCMR010000106         2889 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000540615, whole genome shotgun sequence.
ACCESSION   DASCMR010000106 DASCMR010000000
VERSION     DASCMR010000106.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2889)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2889)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2889
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000540615"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(85..822)
                     /gene="rnc"
                     /locus_tag="QGG16_02700"
     CDS             complement(85..822)
                     /gene="rnc"
                     /locus_tag="QGG16_02700"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR02191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HJP24216.1"
                     /translation="MAIGHEFTDPGLLVDALTHRSWCAEHDGVSNERLEFLGDAVLGL
                     VIAERTFGDQPELPEGQLAKIRASVVSAPALAETARGISLGGALRLGRGELTSGGADK
                     ESILADALEAVIGAVHLDAGLDAARTLIDRLFADLLDRSAEEPGGHDHKTRLQELVAR
                     RSEPAPRYEVTDDGPDHEKRFHAAVVAAGKRHGPASGTSKKRAEQAAALLACIAIESL
                     ESSSPALVPVGAPPAPPSRPVISQESP"
     gene            complement(866..1156)
                     /locus_tag="QGG16_02705"
     CDS             complement(866..1156)
                     /locus_tag="QGG16_02705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000035 - acyl binding [Evidence IEA];
                     GO_function: GO:0000036 - acyl carrier activity [Evidence
                     IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HJP24217.1"
                     /translation="MPAETHVEGAPVGRDEVLELVRDRLADILEIEPTEIAEGASFAD
                     DLDADSLALIELVEAIEEEFSERSVGFRIEDDDLEDLRTVRDAVDYVVSRLG"
     gene            complement(1355..2329)
                     /gene="plsX"
                     /locus_tag="QGG16_02710"
     CDS             complement(1355..2329)
                     /gene="plsX"
                     /locus_tag="QGG16_02710"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: protein motif:HMM:TIGR00182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HJP24218.1"
                     /translation="MLPIAVDAMGGDHAPSEIVAGARTAADDGIPIVLVGRPGELGDT
                     GDLEVIEASEVIAMDAEPGSSVRRMKDSSLVRAAEAVRDGRASAMVSAGNTGATMASA
                     LLRMGRIKGVARPAIATLIPTPGFTPTVMLDSGANAECQPEWLVQFGQMGAVFAHHRL
                     GIAEPRVALLSIGEEPGKGSPFVKEAYAALEAATLRGAEFIGNVEGRDLMTDAVDVIV
                     TDGFTGNVALKTAEGALKALLTALFTAMAGRPEALEAADVLAPELDDLYREFHPDTYG
                     GAMLLGVKGVCIISHGSTNAVAMRNAIGVASEMVRADVVGHITTAVAS"
     gene            complement(2382..2561)
                     /gene="rpmF"
                     /locus_tag="QGG16_02715"
     CDS             complement(2382..2561)
                     /gene="rpmF"
                     /locus_tag="QGG16_02715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HJP24219.1"
                     /translation="MAVPKKKTSKAKGRSRKAAAWTLGRSSRSSCPRCSAIKRPHRIC
                     GNCGWYAGRQAVDVD"
BASE COUNT          481 a          942 c          988 g          478 t
ORIGIN      
        1 ccacggtctt cagcttgcgt cccgagatct ctcgatcgag ggcgtagcgg atggtctcca
       61 cctcgggtag ttcggtttca atgctcacgg ggactcctgg gagatcacgg gacgagacgg
      121 gggcgcaggg ggtgcaccca cgggaacgag ggcgggactg gatgactcga gggactcgat
      181 ggcaatgcag gccagcaggg cggcagcctg ttcggcacgc ttcttggagg ttccgctggc
      241 cggaccatga cgcttcccgg ccgccacaac cgctgcgtgg aaacgcttct cgtggtcagg
      301 gccgtcgtcg gtcacctcgt aacgcggcgc cggttcggat cgacgggcga cgagttcctg
      361 gagacgagtc ttgtggtcgt ggccgccggg ctcctcggcc gatcgatcga gcaggtcggc
      421 gaagaggcga tcgatgagcg tccgggcggc gtccagacca gcgtccaggt gaacggctcc
      481 aatcacggcc tcgagggcgt cggccaggat cgactccttg tcggcgccgc cgctggtcag
      541 ctcgccccgg cccagacgca gggcgccacc gaggctgatg ccgcgggccg tctcggccag
      601 tgccggagcg ctcactaccg aagctcggat cttggccagt tgaccctcgg gaagttccgg
      661 ttggtcaccg aaggtgcgtt cggcgatcac cagaccgagg accgcgtcgc cgaggaattc
      721 cagacgttcg ttggacaccc cgtcatgctc cgcgcaccat gaccgatggg tcagggcgtc
      781 gaccagtagc ccgggatcgg tgaactcgtg tccgatggcc acgaccagag cggacgagtc
      841 gggctgctgt gggaccgggg aggggtcagc cgaggcggga aacgacatag tcgacggcat
      901 cgcggaccgt acgaaggtcc tcgaggtcgt cgtcctcgat ccgaaagccg actgagcgct
      961 cgctgaactc ctcttcgatg gcctccacga gttcgatgag ggcgagcgaa tcggcatcca
     1021 ggtcgtcggc gaacgacgca ccctcggcga tctcggtcgg ctcgatttcc aggatgtcag
     1081 ccagacgatc ccgaaccagt tcgagaacct cgtcgcgccc gaccggggcg ccctccacat
     1141 gggtttctgc aggcacgtcg actcctgtcg atattggccg gttccgggtc tccggagttg
     1201 ttcgccgggc cgtcaaacgg cctaccggac ggtgaacaag cctaccggaa tcaacatcct
     1261 gttcgggagt acccgttagt ggctaaaagg tatctaaagc gcaatatcag ggcgtttggc
     1321 cgggttctgt cggatgggtc gcaaccccag ggcctcaaga tgcgactgcg gtagtgatgt
     1381 ggccgaccac gtcggctcgc accatctccg atgccacgcc gatggcattt cgcatggcca
     1441 cggcattggt tgagccgtgg ctgatgatgc acacgccctt cacccctagg agcatggcgc
     1501 cgccgtaggt gtcggggtgg aactcccggt acaggtcatc tagctcgggg gccagcacgt
     1561 cggcggcttc gagggcctct ggtcgaccgg ccatggccgt gaaaagagcc gtcaagaggg
     1621 ccttcaacgc gccctccgca gtcttcaatg ccacgttccc ggtgaacccg tcggtcacga
     1681 tcacgtcgac cgcgtcggtc atgaggtcac ggccctcgac attgccgatg aactcggcgc
     1741 cccgaagcgt ggcggcctca agggcggcgt acgcctcctt gacgaacggg ctgccctttc
     1801 cgggctcctc tccgatggag agcagcgcca cccggggttc agcgataccc aaccggtgat
     1861 gggcaaacac cgcgcccatc tggccgaact ggaccaacca ttcgggttgg cattcggcgt
     1921 tggcgcccga gtcgagcatg acggtcggcg tgaagccggg agtggggatc aacgtggcga
     1981 tggccggccg ggccacgccc ttgatgcgac ccatccgaag cagggcgctg gccatcgtgg
     2041 cgcccgtgtt cccggcactc accatggccg aggcccgccc gtcgcgtacc gcctcggcgg
     2101 cacggaccag cgacgagtcc ttcatccgtc gaacgctgga cccgggctcg gcgtccatgg
     2161 cgatgacctc ggaggcctcg atcacctcca ggtccccagt gtcacccagt tctccgggtc
     2221 gtcccacaag gacaatggga atgccgtcgt ctgcggcagt gcgcgcgccg gccacaatct
     2281 ctgacggggc gtgatcgccc cccatggcgt caacggcgat gggaagcatg actggggttg
     2341 cgactcggcg gctcagtcgg gacgagtcac tggaacgtcg atcagtcgac gtcgacggct
     2401 tggcggccgg cgtaccaacc gcagttcccg cagatgcggt gcggacgctt gatggcgctg
     2461 caacgcgggc aggaactccg tgaggagcgg cccagagtcc aggcagccgc cttgcggctc
     2521 cggcccttgg ccttggaagt cttcttcttg gggacggcca tcgtcggttc ctcagaggcg
     2581 tcaaacgtcg ggggcggtgc acccgactgc ggtcgatcgg ccggaggcgg tgccccgccc
     2641 cgggcgaccc gatgaggtta gcgggaccgt tgccgaaccg gaacggcgac ctgaccgtca
     2701 ggggatgacc cgtgactcag tgttcgggcg tcaggagtcg gcatcccccg gagaccggag
     2761 ggcatcgagg gccgcccacc ggggatcggc gactggcgcc gcgtcgaggt cgtcgccctc
     2821 agcctcacca ctcccgaagg tcgcagccgg aaatcgttcg ggatccggac cggcacagtc
     2881 ctccgaaca
//
LOCUS       DASCMR010000107         1895 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000542519, whole genome shotgun sequence.
ACCESSION   DASCMR010000107 DASCMR010000000
VERSION     DASCMR010000107.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1895)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1895)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1895
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000542519"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(209..898)
                     /locus_tag="QGG16_02720"
     CDS             complement(209..898)
                     /locus_tag="QGG16_02720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HJP24220.1"
                     /translation="MLPVLGVDADDTLWENEERFHEVEQRFRDLVTPWADSETADAAL
                     LATERTNIARHGYGIKGFVLSMVLTAVEISDAAIDARSLAGIVGWGHEMLAHPIELLD
                     GVPEALDALGSTHRLLLITKGDLGDQLSKVRRSGLADRFWRVEVVPEKDPQTYRDVLD
                     RHGVDPAEFTMVGNSVKSDVLPVLAIGGRAIHVPHTTTWVFEEPNPDELAGVEFPIVE
                     RLGDVSRLIAG"
     gene            1006..1671
                     /locus_tag="QGG16_02725"
     CDS             1006..1671
                     /locus_tag="QGG16_02725"
                     /inference="COORDINATES: protein motif:HMM:NF023430.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3499 family protein"
                     /protein_id="HJP24221.1"
                     /translation="MRDLCMRSACLGPADVLVVMDVSNLTFTIHDLDEVDGPGAVVLC
                     ATHIDRLRAPVGWELIDARGVGTVIPLPGRSMTTDEAADMAGDRSSEVLRPVADVEPI
                     RPGVRSEAAVHPLEKARQAITEADEPVAELIPDTEETPLLARAFLGVDRHPATGSATP
                     ADAGGQPGEEPLNHEDPFAGHQWDQSDEWDTEMAASTAPETGSPASPQMTGQLTFGGD
                     PVA"
BASE COUNT          304 a          570 c          682 g          339 t
ORIGIN      
        1 tctacctgtc ggtggtgcgc gacgggcccc gggtggtgga cgtggccgat gtgatggccc
       61 gggtagccgc cgacggcgcg tacgtgtttc cggggagggt ctgacttccg ggagtgggct
      121 tgagggttgc gaggaagact taagacgcgg gccgtgagtt ggaatccgaa accgagtctg
      181 ttctcggact cgggtgttcg ggccgggttt agccggctat gagtctggac acgtctccga
      241 gccgctccac gatggggaac tccacgccgg ccagttcgtc agggttgggt tcctcgaaca
      301 cccaggtggt ggtgtggggc acgtggatag cccgtccgcc gatggctagg acgggcagca
      361 catctgactt caccgagttg ccgaccatgg tgaactcggc ggggtcgaca ccgtggcggt
      421 ccagcacgtc tcggtacgtc tgtgggtcct tctcggggac cacttcgact cgccagaacc
      481 ggtcagccaa accactgcgt cggactttgc tcagttggtc gcccaggtcg cccttggtga
      541 tgaggagcag tcggtgggta gagcccagcg cgtcgagggc ctcgggcacc ccgtcgagta
      601 gttcgattgg atgggccagc atctcgtgac cccagccgac gatgccggcc agtgaacggg
      661 cgtcgatcgc agcgtcggag atctcgacag cggtgagcac catcgacagg acgaaacctt
      721 tgatgccata gccgtggcgg gcaatgttgg tccgctcggt ggccaggagg gcggcatcgg
      781 ccgtctcact gtcggcccac ggggtcacga ggtcgcggaa gcgttgctcc acctcgtgga
      841 agcgttcctc attttcccac agggtgtcat cggcatcgac gccgagtacg ggcagcatcc
      901 ggcgagccta gggctcatgg ctgttccgcc gaagggcttg agggccgggt gggggtccgg
      961 gggtgtcccc gtcgagaagc aggtccggaa gtacctttga gccccatgcg ggatctgtgt
     1021 atgcgttcgg cctgcctggg cccggctgac gtcctggtgg tgatggacgt ttctaatctg
     1081 accttcacca tccacgatct cgacgaggtg gatggaccgg gtgccgtggt gctgtgtgcg
     1141 acccacatag accgtctccg ggcgccagtc ggatgggaac tgatcgatgc ccgtggggtc
     1201 ggcacggtga ttccgctgcc ggggcgctcc atgacgaccg acgaggcagc cgacatggcg
     1261 ggcgacaggt ccagcgaggt tcttcgtccg gtagccgacg tggagcccat tcgccctggt
     1321 gttcgatcgg aggcggcggt tcatcccctc gagaaggccc gacaggcgat taccgaggcc
     1381 gacgaacccg tcgccgagtt gattcccgac acggaggaga ccccgctcct agctagggct
     1441 ttcctcggcg tcgaccggca tcctgcgaca ggtagcgcga cacccgccga tgccggcggt
     1501 cagccgggag aagaaccact gaaccatgag gaccccttcg ccggtcacca gtgggaccag
     1561 agcgacgagt gggacacgga gatggctgcg tcgaccgctc ctgagaccgg ttcgccggcg
     1621 agtccgcaga tgacgggcca gctcacgttc ggtggcgacc cggtcgcctg atccgggcta
     1681 agtcagcctg gctgtctggg catctgagtc agctagcgga cgaccgcttc ggcgcaagct
     1741 gcaggtcccc ggttcggggc tgacagttgc cgctgggtag gttcgcgccc ggctccggga
     1801 ccgcccggac aaccatgtga accgggagcg atcatgactg aggtgaccga agcagaggtc
     1861 cgggagatgg cgcggcagct ggtggccgac gtgcc
//
LOCUS       DASCMR010000108         3462 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000546223, whole genome shotgun sequence.
ACCESSION   DASCMR010000108 DASCMR010000000
VERSION     DASCMR010000108.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3462)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3462)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3462
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000546223"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..2734
                     /gene="mfd"
                     /locus_tag="QGG16_02730"
     CDS             <1..2734
                     /gene="mfd"
                     /locus_tag="QGG16_02730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003690 - double-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HJP24222.1"
                     /translation="ELFDGMESWLPWLSGDERVLFDLVDDDALVVAVEPRRLRDRIAD
                     LQAEEAELAATLATTWGADDTVFPRLHTDWDRLLAHTGAPVWTMDAVPDGPGVETVQA
                     SGWGRDVAVAVIAEDSEGPAGRLRRLLAEGHRVVVAADGEGSADQLARRLLDAEIEVF
                     RPGAHLEGEDLRFPTGASLVVAPVERGFVLPGSRLALVTEGELTGRRRTRRRTRPRRR
                     SAIRVFEDLAPGDYVVHEHHGVARFGGLTTRSMGGVERDYLLLEYRGDDRLYLPTDQI
                     DAIRPHTGGEVPTLSRMGGSDWQKTRARVRSEVAEIAEELVVLYQQRVTAEGHAFAED
                     TPWQRELEQAFPFQETPDQLRAIDEVKADMERPVPMDRLVCGDVGFGKTEVAVRAVFK
                     AVQDGRQAAVLVPTTLLAQQHGQTFRDRFAPYPVRVEVLSRFLTTAEARTVSEGLADG
                     SIDVVIGTHRLLSADVRFARLGLLVVDEEQRFGVSHKEAIKTFRANVDVLTLTATPIP
                     RTLEMSLTGIRDLSLLDTPPADRQPILTYVGDYDERPIAEAIRRELLREGQVFFVHNR
                     VYDIDQVAGGVRDLVPEARVAVAHGQMDETSLESVVFDFWEGRYDVLVCTTIIESGID
                     MPTVNTLVVDRADLLGLGQLHQLRGRVGRAGQRAYAYLFTPPDRSLSEQAHERLRTIG
                     ETTELGSGFRIAMRDLEIRGAGNLLGTGQTGHIAAVGYDLYCQMVTEAVAELAGTASV
                     PQAEIRVELPVDAHLPEDYVSRSDLRLEAYRKLANAGTEPDPAAVDAVQAEWEDRYGP
                     IPQPVKALLAVARLRTACVARGITEVMVGKGPGLGGPEHIARCAPVVLPLSRQARLAR
                     LYRDARYKEEQQQVFLPLKKPSSGDLASVLTEILEDVVPLFEAGVATGVGTATT"
     gene            2839..>3462
                     /locus_tag="QGG16_02735"
     CDS             2839..>3462
                     /locus_tag="QGG16_02735"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012846.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HJP24223.1"
                     /translation="MLLVAACGSSVEAIRVGETTLDREGVAALVAEATGGPVDVEAVN
                     AEAAANVVDRYVRYEALSDLLAEYDVAVDAEARTAARDRLIAAGVDAGDPSLPRFIGW
                     QSALDVVEEAGGGIRAAYEANAHLLGHDLCTSHILVSYEDDARAVMHLLESGEDFAAL
                     AGSVSQDPGSGQAGGSLGCVGLGRFVPTFERAALGALAAGETLVGPVP"
BASE COUNT          519 a         1150 c         1212 g          581 t
ORIGIN      
        1 cgagctgttc gacggaatgg agtcctggtt gccgtggttg tccggtgacg agcgggtcct
       61 gttcgacctc gtcgacgatg acgcactggt ggtggccgtc gaacctcggc ggctaagaga
      121 tcgcattgct gacctccagg cggaggaggc ggagctggcc gccacgctgg ccaccacgtg
      181 gggtgccgac gacacggtct tcccccggct gcataccgac tgggatcgcc tactggccca
      241 taccggcgcc ccggtctgga ccatggacgc cgtaccggac gggcccggcg tggagaccgt
      301 tcaggcttcc ggttggggcc gtgatgtcgc agtggccgtg attgccgaag actccgaggg
      361 gccggctgga cggcttcgac gcctgctggc cgaaggccac cgggtggtgg tggctgccga
      421 cggggagggg agcgccgacc agttggcgcg ccggctcctc gacgccgaga tcgaggtctt
      481 tcgtccgggt gcccacctgg agggagaaga cctccggttc ccgaccggcg catcgctggt
      541 cgtggcgccc gtcgagcggg gcttcgtcct gccgggctcc cggctggcgc tcgtcaccga
      601 gggcgagctc accggccgcc gacggaccag gcgacggacc cggcctcgcc gacggtcggc
      661 catccgggtg tttgaggatc tggcacctgg tgactacgtc gtccatgagc accacggggt
      721 ggcccgcttc ggcggtctga ctacccggtc gatgggcggc gtcgaacgcg actacctgct
      781 gctcgagtac cggggcgacg accggctcta tctcccaacc gaccagatcg acgccattcg
      841 cccccacacg ggcggcgaag tcccgaccct gagccgcatg ggtgggtcgg actggcagaa
      901 aacccgggcc cgggtgcggt ccgaggtggc cgagatcgcc gaggaactgg tggtgctcta
      961 ccagcagcgg gtgaccgccg agggccacgc cttcgctgag gacaccccgt ggcagcgaga
     1021 gctcgaacag gccttcccat ttcaggagac gcccgaccag ttgcgagcta tcgatgaggt
     1081 caaggccgat atggagcggc cggtgcccat ggatcgcctg gtgtgcggtg acgtcggctt
     1141 cggcaagacc gaggtggcgg tgcgcgccgt gttcaaggcc gtgcaggacg gtcgtcaggc
     1201 cgctgtgctg gtcccgacca ccttgttggc ccagcagcac ggccagacgt tccgggaccg
     1261 cttcgccccg tacccggtac gcgtcgaggt gttgagccgc ttcctgacca ccgctgaagc
     1321 caggacggtg tcggaggggt tggccgacgg atcgatcgac gtggtgatcg gcacccaccg
     1381 cctgttgtcg gccgacgtcc ggttcgcccg cctcggcctg ctcgtcgttg atgaggagca
     1441 gcggtttggc gtcagccaca aggaggcgat caagacgttc cgggccaacg tcgacgttct
     1501 gaccctgacc gccaccccga ttccccgaac gttggagatg tcgcttaccg gcatccgcga
     1561 cctcagcctg ctcgacaccc cacccgcgga tcgccaaccc atcctcacct acgtgggcga
     1621 ctacgacgaa cgtccgatcg ccgaggcgat tcggcgcgag ttgttgcgcg aggggcaggt
     1681 gttcttcgtc cacaaccggg tctacgacat cgaccaggtg gccggtgggg tacgcgatct
     1741 agtgcccgag gcgcgggtcg ccgtggccca cggacagatg gacgagacca gcctggagtc
     1801 ggtggtattc gacttctggg agggtcgcta cgacgttctg gtttgcacca ccatcatcga
     1861 gtcgggcatc gacatgccga cggtcaacac cctggtcgtg gaccgggccg accttctggg
     1921 tctgggccag ctccaccagc tgcggggccg ggtcggccgt gcaggacaac gggcctacgc
     1981 ctacctcttc actccgccgg acaggtcgct cagcgaacag gcccatgaac ggctccgcac
     2041 catcggcgaa accactgagc tgggttcggg cttccggatc gccatgcgcg acctcgagat
     2101 ccggggggcc ggcaacctgc tgggcaccgg gcagaccggg cacattgcgg cggtgggcta
     2161 tgacctctac tgccagatgg ttaccgaggc ggtggctgag ctggctggaa cggcatcggt
     2221 gccgcaggcc gagatccgtg tcgagttgcc ggtcgacgcc cacctgccgg aggactacgt
     2281 gtcccgaagc gacctacgac tcgaggccta ccgcaagctt gccaacgccg gaaccgagcc
     2341 tgatccggct gccgtcgacg ccgtgcaggc cgagtgggaa gaccgctatg ggccgattcc
     2401 tcagccggtg aaggcgctcc tggcggtggc ccgcctccgt acggcatgcg tggcccgtgg
     2461 cattaccgaa gtcatggttg gcaagggccc cggtctcggc gggcccgaac acattgcccg
     2521 ctgtgccccg gtggtcctcc ccttgagtcg ccaggcccgc ctggcccgcc tgtatcgcga
     2581 cgcccggtac aaggaagagc agcagcaggt cttcctgccg ctgaagaagc ccagctccgg
     2641 cgacctcgcg tcggtgctaa ccgagattct ggaagacgtc gtgccactgt ttgaggctgg
     2701 cgtggcgacg ggtgtcggca ccgccacgac ctgaggatcg cgtagcctgc acgacctgtg
     2761 cgtcccttga acgaggtccc cgcgaagaga cgagtcggct cgaccgccag tgcgctggtc
     2821 gccctcaccc tgcccatcat gctgctggtc gcagcctgtg gttcctcggt cgaggcgatc
     2881 cgggtcggcg agaccacgtt ggatcgggag ggagtggccg cccttgtggc cgaggccacc
     2941 ggaggcccgg tggatgtcga agccgtcaat gccgaggcgg cggccaacgt cgtcgaccgg
     3001 tacgtccgtt acgaggcgct gtccgacctt ttggccgaat acgacgtggc ggtcgatgcc
     3061 gaggcgcgca ctgctgcccg ggatcgcctg atcgctgccg gcgtggatgc cggagacccc
     3121 tcgttgccgc gcttcatcgg gtggcagtcc gccctcgacg tggtggagga ggccggaggc
     3181 ggcatccggg ccgcctacga ggccaacgcc cacctgctgg gccacgacct gtgcaccagt
     3241 cacattctcg tctcttacga ggacgatgcc cgggccgtca tgcatctcct tgagtccggg
     3301 gaggacttcg cggcattggc cggatcggtc tcccaggatc cgggatcggg acaggccggc
     3361 ggatcgctgg gttgtgtcgg actcggtcgt ttcgttccca catttgaacg ggccgctctc
     3421 ggagccctag ctgccggtga gactctggtg ggtccggtac cc
//
LOCUS       DASCMR010000109         2929 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000546984, whole genome shotgun sequence.
ACCESSION   DASCMR010000109 DASCMR010000000
VERSION     DASCMR010000109.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2929)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2929)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2929
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000546984"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..554
                     /locus_tag="QGG16_02740"
     CDS             <1..554
                     /locus_tag="QGG16_02740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24224.1"
                     /translation="ETTFRPGRPTTERYRSLALINFRSFEVEVSFDFATGDRGTLVAH
                     GDQGGGYALYVVDDQLMLAWNGYGSMAEVDGGLLTTGAASVVLAVEALGDLKLDVELR
                     VDGEVVGGARDLPVLTAMAPFQGIDVGIDRKSPVSWAIRQRFGTFAWTGSLDGVTYRP
                     GEEAPDAGARWLDVLREAGTKFE"
     gene            592..1209
                     /locus_tag="QGG16_02745"
     CDS             592..1209
                     /locus_tag="QGG16_02745"
                     /inference="COORDINATES: protein motif:HMM:NF013053.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HJP24225.1"
                     /translation="MDLQDLVDPAHTALCVVECQNGVVGEASNMPAVADAVAASGLLP
                     RLAVLAGAARSAGVRVVHCTFHAHPDLWGGNRNSRLFAAGRRAEVQQYVGTEAVEPAA
                     EIGFVEGVDVIVPRFHGLSPVAGTGLAPMLGNEGVTTVVVVGVSLNVAIPNAVFDLVN
                     EGFQVVVPADGSVATMPGYGEQVLEHTLAYISTLTDVATLVEAWL"
     gene            complement(1241..2512)
                     /locus_tag="QGG16_02750"
     CDS             complement(1241..2512)
                     /locus_tag="QGG16_02750"
                     /inference="COORDINATES: protein motif:HMM:NF013109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HJP24226.1"
                     /translation="MSDDQTADRAESLAEPPSRPVPADLLAGLSVAMVLVPQSMAYAE
                     LAGLPSHLGLFASALPPILAAFFASSPYLQTGPVALTSLLTFGALAGLAEVGTPDYVA
                     MAALLALLVGVSRLLLGVFRLGVVTYLMRDPVVTGFTSAAAILILASQLPKALGAAAP
                     TGGVLWRAGWSLGHVGQWEVASVVIAATTVLLVLAGRQVIHRLFPGALLAVVGGVVIS
                     RIVDYAGPVVGQVPTGLPDLSLDLPWGSTGTLLVGGVLIALVGYAEPASIARVFAEED
                     GHRWSADREFVSQGVANVAAAVSGAFPVGGSFSRSSLNRLTGAQTRWSGLVTGAAVLA
                     FLPFADVLAPLPRATLGGVVIAAVVGLVRPVALVSMVRRSPAAALVAWVTFFATLALA
                     PRVEQGVLVGILLSLAVGLRTRRAARRPEVR"
     gene            2536..>2929
                     /locus_tag="QGG16_02755"
     CDS             2536..>2929
                     /locus_tag="QGG16_02755"
                     /inference="COORDINATES: protein motif:HMM:NF012514.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HJP24227.1"
                     /translation="MGRGGSEQGSAGPHRDEIPTDDVPIRSAATVVLLDDRPDLHVLA
                     LRRTDASTFVAGYTLFPGGAVDDGDHDARWGDLSSGAVGALPGMDDPLSYRIAVVRET
                     IEEIGVAVGIANEAVAADLVARRHDLESG"
BASE COUNT          477 a          962 c         1075 g          415 t
ORIGIN      
        1 tcgagacgac cttccggccg ggcagaccga cgacggagcg gtaccggtcc ctcgccctca
       61 tcaacttccg atccttcgag gtcgaagtgt cgtttgactt tgcgacgggc gaccggggca
      121 cgttggtggc ccacggtgac cagggcggcg ggtacgccct ctacgtggtc gacgaccagc
      181 tgatgttggc gtggaacggc tacggctcga tggctgaagt agacggggga ttgctcacta
      241 ctggagcggc ctccgtggtg ctggccgtgg aggcattggg cgacctgaag ctcgacgttg
      301 agttgcgggt cgacggcgag gtagtgggtg gtgcccgtga cctcccggta ctgaccgcca
      361 tggccccctt ccagggcatc gacgtgggca tcgaccggaa gtcgccggtc tcgtgggcca
      421 tccggcaacg attcggaacc tttgcctgga cgggctcgct cgacggcgtg acctaccgtc
      481 ccggagagga ggcacccgat gcgggtgccc gctggctgga cgtccttcgc gaggccggca
      541 ccaagttcga atagcccggc gaggccggag aagggaagat cggtcatggg catggatctt
      601 caggacctgg tggatcccgc acacaccgcc ctgtgcgtgg tcgagtgcca gaacggtgtg
      661 gtgggcgagg cgtcaaacat gcccgcggtg gctgatgcgg tggctgcctc cgggctcctg
      721 ccccgtctgg cggtcctggc cggtgctgcc cgatcggcgg gggtacgagt cgtgcactgc
      781 accttccacg cccaccccga cctgtggggt ggcaaccgga actcccgcct gttcgccgct
      841 ggtcgtcggg ccgaggtgca gcagtacgtg ggcaccgagg cggtcgagcc ggctgctgag
      901 atcggtttcg tcgagggggt cgacgtcatc gtgccccggt tccacgggct gtcgccggtg
      961 gccggcaccg ggttggcacc catgctcgga aacgagggcg tgacgaccgt ggtggtggtt
     1021 ggagtgagcc tcaacgtggc catccccaac gcggtgttcg acctggtcaa cgagggcttc
     1081 caggtggtgg tcccggccga cgggtcagtg gccacgatgc ccggctacgg cgaacaggta
     1141 ctggagcaca cattggccta catctcgacg ctgaccgacg tggccaccct cgtcgaggcg
     1201 tggttgtagc cggggctgga ggttgtttcc cgggttttgg ttatcggacc tcaggtcgtc
     1261 tggccgcccg gcgggtccgt aggcccacgg cgagcgagag caggatcccc accagcacgc
     1321 cctgttcaac tcgaggggcc aacgccaacg tggcgaagaa ggtgacccac gccaccaggg
     1381 cagcggccgg tgatcgacgg accatggaga cgagggccac cgggcggacg agccccacca
     1441 ccgcggcgat caccacccca ccgagggtgg cccggggtag cggagcgagc acgtcggcga
     1501 acggcaggaa ggccagcacg gcggccccgg tgaccagacc cgaccacctc gtctgggccc
     1561 cagtcaggcg gttcagcgac gagcggctga acgatccgcc caccgggaag gcgccggaca
     1621 ccgctgcagc cacgttggcc acgccctgac tcacgaactc ccgatcggcg ctccaccgat
     1681 gtccatcctc ctcggcgaac acccgggcaa tggacgccgg ctcggcgtag ccgactagcg
     1741 cgatgagcac gccgccgaca aggagggtgc cggtggatcc ccaaggaagg tccagcgaga
     1801 ggtcgggcag cccggtcggc acctggccga ccaccggccc ggcgtagtcg acgatccggc
     1861 tgatcaccac tcctccgacg acggccagca gggcgccggg gaacaggcgg tggatgacct
     1921 gccgaccggc cagtaccagc agcacggtgg tcgcggcgat caccaccgag gcaacctccc
     1981 actggccgac gtggcccaac gaccagccgg cccgccacag cacgccgccg gtgggggcgg
     2041 ccgccccgag tgcctttggg agctgcgagg cgaggataag gatggcggcc gccgaggtga
     2101 acccggtgac gacgggatca cgcatgaggt acgtcaccac cccgagtcgg aatactccga
     2161 ggagtagccg cgataccccg accagcaggg cgagcagggc ggccatggcc acgtagtcgg
     2221 gagtgccgac ctcggccaga ccggccaggg caccgaaggt caagaggcta gtcagggcca
     2281 ccggaccggt ctgcaggtac ggcgacgagg cgaagaaggc agccaggatg ggcggcagag
     2341 ccgaggcgaa caggccgaga tgggatggca ggccggccag ttctgcgtac gccatggact
     2401 gggggaccag caccatggcc acgctcagtc cggccagcag gtcggccggc acgggcctcg
     2461 acggtggttc ggccagtgat tcggcccggt cggcggtctg gtcgtcggac atcggtccga
     2521 ccctaggatc ggcgggtggg ccgcggagga tcggagcagg ggtcagccgg cccgcaccgc
     2581 gacgagatcc ccaccgatga cgtgccgatc cgatcggcgg ccaccgtggt gctgctcgac
     2641 gaccgccccg acctgcacgt gctcgcgctg cgtcgcaccg acgcctctac gttcgtggcc
     2701 gggtacacgt tgttccccgg gggagcggtg gacgacggcg accacgacgc ccggtggggg
     2761 gacctgtcct cgggtgctgt gggagcactt ccaggcatgg acgatcccct ctcgtaccgg
     2821 atcgccgtgg tgcgggagac gatcgaggag atcggggttg ccgtcggcat cgccaacgag
     2881 gcagtggccg ccgatctggt ggcccgccgc cacgacctgg agtcgggtg
//
LOCUS       DASCMR010000110         2839 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000548321, whole genome shotgun sequence.
ACCESSION   DASCMR010000110 DASCMR010000000
VERSION     DASCMR010000110.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2839)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2839)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2839
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000548321"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..358
                     /locus_tag="QGG16_02760"
     CDS             <1..358
                     /locus_tag="QGG16_02760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24228.1"
                     /translation="GMGEVRRLRVEALPMDPIFAHESEQRVADLLDFYEIAWDYEPRT
                     FVLETAPDGNPRTAFTPDFYLPDHDLYLEVTTLRQSLVTRKNRKVRLLRERHPGIHIR
                     ILYRRDLERLLVTHAA"
     gene            complement(610..1410)
                     /locus_tag="QGG16_02765"
     CDS             complement(610..1410)
                     /locus_tag="QGG16_02765"
                     /inference="COORDINATES: protein motif:HMM:NF004855.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HJP24229.1"
                     /translation="MSKPDLRNNPAFKSEKPIPYDIPTFDDVEAERQHRKERLAAAFR
                     IFGKYGFSEGVAGHVTVRDPEHTDCFWVNPFGTPFSHIRVSDLLLVSHTGEIMHGEFA
                     VNQAAFAIHSGLHMARPDVIAAAHSHSLYGKAWASLGRPLDAITQDACIFYGDHVVFD
                     DYTGVVNDPEEGKRIAYALGDRSAAILRNHGLLTVGQSVEAATWLFVTMERSCQAQLL
                     AEAAGTPVIMDDETAAMTHRQVAGNFASWFSAQPLFAQILREQPDLLD"
     gene            complement(1521..2609)
                     /gene="aroC"
                     /locus_tag="QGG16_02770"
     CDS             complement(1521..2609)
                     /gene="aroC"
                     /locus_tag="QGG16_02770"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HJP24230.1"
                     /translation="MGNTFGTLFRISTWGESHGAGIGVVVDGCPPRLPLTADDLQHDL
                     DRRRPGQSRLTTQRAEADRVEILSGIFEGRTTGGPIAVLVRNDDARSGAYDHLKDLYR
                     PSHADFTYDAKYGNRDWRGGGRSSARETIGRVAAGAIARRLLAEVAGIEVLGWVSRVH
                     DVVADVDAGSVTLHAVEAEPTRCPDPLASTAMTEAIDAARHDGDSLGGIVTCVARGVP
                     AGLGTPVFDRLEADLAKGMLSLPASKGFDVGAGFDAVSMTGREHNDAFVPGPDGPVTA
                     TNRSGGVQGGISTGDDVVFRVAFKPTATIASAQDTVTVDNEAVSLEAKGRHDPCVLPR
                     AVPMVEAMALLVLADHWLRQQAVNVLPS"
BASE COUNT          483 a          893 c          951 g          512 t
ORIGIN      
        1 cggcatgggc gaagttcgaa gacttcgggt cgaagcgctt ccaatggatc ccattttcgc
       61 ccacgagtct gagcagcggg tggccgatct gctggacttc tacgagattg cttgggacta
      121 cgagccccgc accttcgtat tggagaccgc ccccgacggc aacccccgca cggcattcac
      181 ccccgacttc tacctgcccg atcacgacct ctacctagag gtcactactc tccgccagtc
      241 gctggtgacc cgcaagaacc gcaaggtccg tctactccga gaacgtcacc ctgggattca
      301 catccgaatc ctctatcgcc gagacctcga acgcctcctg gttacccacg ccgcctgatc
      361 gcccggatcg gccggccgac tacgggggcc caccggccct tgatcgatag cgccccagac
      421 gcggagacct ctttccgacg tgggactaca caatcgcctt ggtgttcccg ccggtgaacg
      481 agggtgctgc attggtcgtc cactagctat gaccggcgtg gacacctatc tcattgccca
      541 acccattgtg agcgactggt cctgagggcc ggccctgagg cgcatatctg ccttggatcc
      601 ggtgcggcgt cagtccagga ggtcgggctg ttcacgcagg atctgggcga acaacggctg
      661 ggcactgaac cagctggcga agttgcctgc cacctgccgg tgggtcatcg ctgcggtctc
      721 gtcatccatg atgaccggcg taccggctgc ctcggccagc aactgggcct gacaggagcg
      781 ttccatggtg acgaagagcc aggtcgccgc ctccacggac tgaccaactg tcaagagccc
      841 gtgattcctc aggatggctg cactccggtc tccgagggcg taggcgatgc gtttgccttc
      901 ctcggggtcg ttgacgactc cggtgtagtc gtcgaacaca acgtggtcgc cgtagaagat
      961 gcaggcgtct tgagtgatgg cgtctagcgg tcgaccaagc gaggcccaag ccttgccgta
     1021 cagcgaatgg gagtgggccg ctgcgatcac atcggggcgg gccatgtgga ggccggaatg
     1081 gatggcgaac gctgcctggt tgacggcgaa ttcgccgtgc atgatctcgc cggtgtgact
     1141 caccaggagg aggtccgaga ctcggatgtg gctaaacggt gttccaaacg ggttaaccca
     1201 gaaacagtcg gtgtgttcgg ggtcgcgcac ggtgacatgg ccggccactc cttcgctgaa
     1261 cccgtatttg ccgaagattc ggaaggcggc agccaggcgc tctttgcggt gttggcgctc
     1321 ggcctcgacg tcatcgaacg tcgggatgtc gtagggaatg ggcttttcgg atttgaatgc
     1381 cgggttgttt cgcagatcag gcttactcac gtcgggcgcc tccgctaagc gatcagggtt
     1441 tacatcaagt gtagataacg actcgctcgt cggccggatc gggtcgagtg gcaacggtca
     1501 gcaacgcgtc gcgttccacc tcaggagggg aggacgttga cggcctgctg gcgtagccag
     1561 tggtcggcca gtacgaggag tgccatggct tcgaccatgg gaacagcacg cggtagcacg
     1621 cacgggtcgt gacgaccctt ggcctccagg gagaccgcct cgttgtcaac agtaacggtg
     1681 tcctgcgccg aggcaatggt ggccgtgggt ttgaaggcca cccggaacac cacgtcgtcg
     1741 ccggtactga taccgccctg gacgccaccg gaccggttgg tggcggtaac cggcccgtcg
     1801 ggaccgggca cgaaggcgtc attgtgctct cggcccgtca tggacacagc gtcgaagccg
     1861 gcgcccacgt cgaatccctt ggatgccggg agcgacagca tgcctttagc caggtcggcc
     1921 tcgagacggt cgaacacggg tgtgccgagg ccggctggca cgcctctggc cacacaggtc
     1981 actatgccgc ctagcgagtc gccgtcgtgg cgggctgcat cgatggcttc ggtcatggcg
     2041 gtcgaggcga gcgggtccgg acagcgggtg ggctcggcct ccacggcatg gagggtcact
     2101 gagccggcat ccacgtcggc caccacgtcg tggacccgag acacccagcc gagcacctca
     2161 atgccggcca cctcggccag caggcgccgg gcaatggctc cggctgccac acggccaatg
     2221 gtctcgcggg cgctggaacg tccgccgccg cgccagtcac ggttgccgta cttcgcgtcg
     2281 taggtgaagt cggcgtgcga ggggcggtac aggtccttga ggtggtcgta ggccccggag
     2341 cgggcatcgt cgttgcggac cagcacggca atggggcctc cggtggttcg gccttcaaat
     2401 atgcctgaca ggatttccac gcgatcggcc tctgcccgct gagtggtgag gcggctttgg
     2461 ccgggccggc gacggtcaag gtcgtgctgc aggtcgtccg cggtcaaggg gaggcggggc
     2521 ggacagccgt cgaccaccac accgatcccg gcgccatggc tctcgcccca cgtgctgatg
     2581 cggaacagag ttccgaaggt gtttcccacg ggaatcgagc ataggggcgg accccatggc
     2641 gcttcgtgtc cattcggacc ggttgccagc ccgctcccgg gtggtccgcg ccggctggct
     2701 accatcgccg gccgtgggag acctcgacgg aagactcaac ctggccaccg cttgggaggc
     2761 aattgccgac gaggtcggtg atcagccggc ccattcagcg gccggcgtac ggagttcgtg
     2821 gacagagttc gatgatcgg
//
LOCUS       DASCMR010000111         1925 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000552818, whole genome shotgun sequence.
ACCESSION   DASCMR010000111 DASCMR010000000
VERSION     DASCMR010000111.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1925)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1925)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1925
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000552818"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1092)
                     /locus_tag="QGG16_02775"
     CDS             complement(<1..1092)
                     /locus_tag="QGG16_02775"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJP24231.1"
                     /translation="MTDLTDTVRVPFAVKALIFTFFLSAFATVGQITIIGKQVYDLTG
                     SELHLGLLGLAEFLPVAVLAPFAGAAADRFDRRIVFGVAIAGEVVASLLLFLYARTDP
                     TSVTPIFAIVLFFGLCRTFASPTGRALAIDLSPPEVVARVVALKTVGYQGGLIIGPIA
                     FGFAFVADESLPYLLSTIALIAVVGIVVFVPSSGVRRLASTGSRQAIHDAFEGLRFIR
                     RSPILLGAMGLDLFAVLFGGAVALLPAIAEERLGVGAVGLGWLRAGVGIGAGVVAVTL
                     SVRPLQHRLGRILLFVVALFGLGTIGLGLTRSFALAFTAIVLLSAADAVSMFIRLTLV
                     PLATPEDMRGRVLAVENVFIGASNELGAAE"
     gene            complement(1089..>1925)
                     /locus_tag="QGG16_02780"
     CDS             complement(1089..>1925)
                     /locus_tag="QGG16_02780"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HJP24232.1"
                     /translation="HEVLHGRGLALLRGFPVERRSVDELGLMFWGIGLRLGRAVSQSV
                     MGERLGHVVNVTDVDPHARAYRNRSELAPHSDPGDILSFLCIRPALDGGVSRFVSSLA
                     VFDEIRRSRPDLLDRLARGYRYHRFGEQGPDDAPITPHRVPVFSACDGLVSGRYVPEY
                     VQIAADEDPSIQLDDVDHEALDLLHTTTNQADLVLDFTMAAGEAVVANNYTVFHARTA
                     FTDSPEHRRHLLRLWLAAEPPRPVVPGTEQYPDGPGISPQPGQTPSFASRYDEPSQPG
                     RQ"
BASE COUNT          372 a          628 c          660 g          265 t
ORIGIN      
        1 ctcggcggca cccagttcgt ttgacgcccc gatgaacacg ttctcgacgg ccagcacacg
       61 gccccgcatg tcctccgggg tggcgagggg caccaacgtc agccggataa acatcgacac
      121 agcgtcggcc gccgatagca gcacgatggc ggtgaacgcc agggcgaagc tgcgggtcag
      181 gcccagccca atggtgccca ggccgaacag ggcaactacg aacagcagaa ttcgaccaag
      241 ccggtgttgt agcggtcgta ccgagagagt cacggccacc acgccggccc cgatgcccac
      301 gccggctcgc agccaaccca gtcccacggc acccaccccg aggcgctctt cggcgatcgc
      361 tgggagtagt gcgaccgccc caccgaacag cacggcgaac aggtccagac ccattgcccc
      421 cagcaagatg gggctgcgcc ggatgaaccg caggccctcg aaggcgtcgt ggatggcctg
      481 ccgggacccg gtgctggcca gacgtcgtac ccccgacgac gggacgaaga cgacgatgcc
      541 gacgacggcg atcaaggcga tggtcgacaa caggtagggg agtgattcgt cagcaacaaa
      601 ggcgaagccg aaggcgatcg gtccgatgat caggccgccc tgatagccga cggtcttaag
      661 ggccaccacg cgggccacca cctccggtgg actcaggtca atggccagcg cccggccggt
      721 cggtgaggcg aaggtccgac aaagtccgaa gaacaggacg atggcgaaga tcggcgtgac
      781 ggaggtcgga tcggttcgtg cgtagaggaa cagcagcagc gacgccacta cttcgccagc
      841 gatggcgacg ccgaacacga tccgacgatc gaaccggtca gctgccgcac cggcgaacgg
      901 tgccagtaca gccaccggca ggaactcggc caagcccagc aggccgaggt ggagttcact
      961 gcccgtcagg tcatagacct gcttgccgat gatggtgatc tggccgaccg ttgcgaaggc
     1021 gctgaggaag aacgtgaaga tcaacgcctt aacggcgaac ggcacccgaa cggtgtcggt
     1081 taggtcggtc actgtcggcc tggctggctg ggctcgtcgt accggctggc gaacgacggg
     1141 gtctgtcccg gctgcggcga gatacccggc ccgtcggggt actgctcggt cccgggcacc
     1201 accgggcggg gtggttcagc ggccagccac agtcgcagca ggtggcggcg gtgctccggc
     1261 gaatcggtaa acgccgtgcg ggcatggaag accgtgtagt tgttggccac cacggcctcg
     1321 ccggccgcca tggtgaaatc cagtaccagg tcggcctggt tggtggtggt gtgcagcagg
     1381 tcgagggctt cgtggtcgac atcgtccaac tggatcgacg ggtcctcgtc agcggcgatc
     1441 tgcacgtatt cgggcacgta ccggccactc accagcccgt cgcacgcgct gaacaccggc
     1501 acgcggtgcg gggtaatggg cgcgtcgtcc gggccctgtt cgccgaagcg gtgatagcgg
     1561 taaccccggg ccagccgatc caacaggtcg ggccgggagc gtcggatctc gtcgaacacg
     1621 gccagcgagc tcacgaaccg gctcactccg ccgtccagtg ccgggcggat gcagaggaag
     1681 gacagtatgt cgcccgggtc gctgtggggg gccagctcgg agcggtttcg gtaggcacgg
     1741 gcatgtggat ccacgtcggt cacgttcacg acatgaccca ggcgttcgcc catgacgctc
     1801 tgggagacgg ccctcccgag gcgcaacccg atgccccaga acatcaggcc caactcgtcc
     1861 accgatcgac gctccaccgg gaatccccgc aacagggcaa ggccccgtcc gtggaggact
     1921 tcgtg
//
LOCUS       DASCMR010000112         2270 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000553456, whole genome shotgun sequence.
ACCESSION   DASCMR010000112 DASCMR010000000
VERSION     DASCMR010000112.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2270)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2270)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2270
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000553456"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..883
                     /gene="manB"
                     /locus_tag="QGG16_02785"
     CDS             <1..883
                     /gene="manB"
                     /locus_tag="QGG16_02785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442410.1"
                     /note="converts mannose-6-phosphate to
                     mannose-1-phosphate; the resulting product is then
                     converted to GDP-mannose by ManC which is then used in the
                     synthesis of mannose-containing glycoconjugates that are
                     important for mediating entry into host cells; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HJP24233.1"
                     /translation="HVRSFADLSALRPLHLVVDTANGMGGLVVPAVLDGLPFTVDHLY
                     PELDGTFPNHPADPIQPENLRDLQARVLATGADLGLAFDGDADRVFLVDEQARPISGS
                     TTTALVARGVLRREPGATILHNLICSKAVPEVVAEEGGVALRTRVGHSLIKQAMATEG
                     AAFAGEHSGHYYFRDNFRADSGIIAVLVVLEALSTHGGPMSDLVAPLERYGASGERNT
                     EVDDPKEVIERVAAHYRTEAPEADQDRLDGLTVDFGDWWFNLRPSNTEPLLRLNVEAA
                     NAEACAVRVDEVQSLFT"
     gene            981..1217
                     /locus_tag="QGG16_02790"
     CDS             981..1217
                     /locus_tag="QGG16_02790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trm112 family protein"
                     /protein_id="HJP24234.1"
                     /translation="MTLDPKLLEILACPEDKGPLLWFADEDALYNPRLQRRYAVRDGI
                     PVMLVDEAEQVDDAEHDRLTALAAAEGIQPTFGD"
     gene            1284..>2270
                     /gene="manA"
                     /locus_tag="QGG16_02795"
     CDS             1284..>2270
                     /gene="manA"
                     /locus_tag="QGG16_02795"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: protein motif:HMM:TIGR00218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004476 - mannose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-6-phosphate isomerase, class I"
                     /protein_id="HJP24235.1"
                     /translation="MDLLDGVIRSYDWGSTTALADLRGIAPSGVPEAELWFGAHPSGP
                     STFRGDGRDVTADEMPFLVKVLAVERPLSLQAHPDQQAAVVGHRREDEAGLATEDPQR
                     CFPDACAKPEMVCAIGRFETLCGFRPVDEAVAAGTALGLPEAVVDAIRRVDWPTVVAA
                     VLASTPDDLADLLSAAHGIATSAPSSEAHRPAAEMVLRLAELHPGDPALLLVPLLRHL
                     VLADGDALFVAPGVLHAHLSGLAIEVMAVSDDVVRAGLTSKHVDPAALVEVLRSDRVD
                     VVESPTGPVHRYAAGQTEDQISEVGAVLWRLAGDGLDVDLSDRRGPELVICTQ"
BASE COUNT          353 a          811 c          745 g          361 t
ORIGIN      
        1 gcatgtccgg tcgttcgccg acctctcggc actacgaccg ctacatctcg tggtcgatac
       61 ggctaacggc atgggaggcc tggtcgttcc ggcggtgttg gacggcctcc cgttcacggt
      121 ggaccacctc tatccggaac tggacgggac cttccccaac catcccgccg atccgatcca
      181 gccggaaaac ctccgcgacc tccaggcccg ggtgctggcc accggcgccg atctgggact
      241 ggccttcgac ggtgacgccg accgggtctt cctggtcgac gaacaggccc gcccgatctc
      301 ggggtcgaca accaccgcac tggtggcccg gggggtccta cggcgtgaac ccggtgcgac
      361 catcctccac aacctcatct gctcgaaggc cgtgcccgaa gtggtcgccg aggagggagg
      421 ggtcgcccta cggacccggg tcggccactc tctcatcaag caggccatgg ccaccgaggg
      481 ggcggccttt gccggcgaac actccgggca ctactacttc cgcgacaact tccgggccga
      541 cagcgggatc attgccgtcc ttgtcgtcct cgaggccctc tccacccacg gcggaccgat
      601 gagcgacctg gtcgcccccc tggagaggta tggggcatct ggcgagcgca acaccgaagt
      661 ggatgaccca aaggaggtca tcgaacgagt ggccgcccac taccgcaccg aggcccccga
      721 ggccgaccag gaccgcctcg acgggttgac cgtcgacttc ggcgactggt ggttcaacct
      781 gcgaccctcc aacaccgaac cgctcctacg tctcaacgtt gaggcggcca acgccgaggc
      841 gtgcgcggtc cgggtcgacg aggtccaaag cctgtttacc tagcggcatc ccggtgaacg
      901 gaacccttcc aacagtcgcc gggcgggtgt caccgctgtc gcgaccaata gcctgaggca
      961 atgatgtctg gcctgacgaa atgacgctcg atccgaagct cctagagatc cttgcctgcc
     1021 cggaggacaa gggcccgctg ctctggttcg ccgacgagga cgcgttgtac aacccccgac
     1081 tgcagcgccg gtacgcggta cgggacggca tcccggtgat gctggtcgac gaggccgaac
     1141 aggtcgacga cgccgagcac gaccggctca ccgctctggc ggccgccgag ggcatccagc
     1201 cgaccttcgg ggactgacct ccccggtcac gacctggccc cgtctgcacg ccctcttctc
     1261 tacggcctgt ccggaagcga cccatggacc tgctcgacgg tgtgatccgg tcctacgact
     1321 ggggatccac caccgcgctg gccgacctgc gcggcatcgc tcccagtggc gtaccggagg
     1381 ccgagttgtg gttcggcgcc cacccgtctg gcccctcgac cttccgcggc gacggtcgcg
     1441 acgtgacggc ggacgagatg ccgttcctgg tcaaggtgct ggccgtggag cggccgctct
     1501 ctctccaggc ccatcccgac caacaggcgg ccgtggtcgg acaccggcga gaggacgaag
     1561 ccggactggc gaccgaagat cctcagcggt gctttcccga cgcctgtgcc aaaccggaga
     1621 tggtgtgtgc aatcgggcgg ttcgagaccc tctgcgggtt ccggccggtc gacgaggcgg
     1681 tggccgcggg gacggcgctg gggctaccgg aagcggtcgt cgacgccatc cggcgggtcg
     1741 actggccaac cgtggtggct gccgtcctgg cgtccacgcc cgatgaccta gcggaccttc
     1801 tctcggccgc ccacgggatc gcaaccagcg cgccgtccag tgaggcgcac cgccctgccg
     1861 ccgagatggt tctgcggctg gccgaactgc atccgggaga ccccgcgctg ttgctcgtcc
     1921 cgctgctacg tcatctggtg ctagccgacg gtgatgccct gttcgtggct cccggtgtcc
     1981 tgcacgccca cctctcggga ctggctatcg aggtcatggc cgtctccgac gacgtggtcc
     2041 gggccgggct aaccagcaag cacgtggacc cggccgctct cgtcgaagtg ctccgctccg
     2101 accgggtcga cgtcgtggag tcaccgaccg gcccggtcca ccggtacgca gccggccaga
     2161 cggaggacca gatcagcgag gtcggcgccg ttttatggcg gctggccggc gatgggctcg
     2221 acgtcgacct gtccgaccgt cgtggccccg aactggtgat ctgcacgcag
//
LOCUS       DASCMR010000113         1731 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000556806, whole genome shotgun sequence.
ACCESSION   DASCMR010000113 DASCMR010000000
VERSION     DASCMR010000113.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1731)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1731)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1731
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000556806"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            198..1484
                     /gene="aceA"
                     /locus_tag="QGG16_02800"
     CDS             198..1484
                     /gene="aceA"
                     /locus_tag="QGG16_02800"
                     /EC_number="4.1.3.1"
                     /inference="COORDINATES: protein motif:HMM:NF011645.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004451 - isocitrate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase"
                     /protein_id="HJP24236.1"
                     /translation="MRNTFDDQVAALERDWNENPRWKDTVRDYTAADVVRLRGSFLPE
                     CSIARHGAEVLWEKMHNTDYVHALGAMTGGQAIQYVKGGLPALYLSGWQVAGDANLAG
                     QVYPDQSLYPANSVPAVVERLNNALRRADQIEWSENKGEMLRDWMVPIVADAEAGFGG
                     ALNVYELMKRMLRAGAAGVHFEDQLASEKKCGHMGGKVLIPTQQHVRTLTAARLAADV
                     LGVPSVLIARTDALAANLITSDVDDRDKPFLNGERTAEGFFGTEPGMATPISRALAYA
                     PYSDLIWCETGTPDLDQAKEFADAVHAEFPGKMLAYNCSPSFNWKSALDDDTIAKFQS
                     ELGKMGYKFQFITLAGWHALNASAFELAKGYTESDMTAYVALQQAEFGMEDDGYTATR
                     HQREVGAGYFDDVATVISGGTASTLALEGSTEEEQF"
BASE COUNT          313 a          578 c          544 g          296 t
ORIGIN      
        1 gggctgtctt cgaggaggtg gccttgtcct ctgaattcat cgagttcctc accctgcccg
       61 cctacgagct cctcgactga cataccgctc ccttaccggc cggcccctta cagacaggcg
      121 cctcccgaca gccccttacc caaatcccga tcggatcccg gcgcccgccg agggtcctcc
      181 atgaaagcga gttagagatg cgaaacacct tcgacgacca ggtcgcagcc ctggagaggg
      241 actggaacga gaacccgcgc tggaaggaca ccgtccgcga ctacacggcg gccgatgtcg
      301 tccgtctgcg tggatcgttc cttcctgagt gctcgattgc ccgtcacggc gccgaggtgc
      361 tgtgggagaa gatgcacaac acggactacg tgcatgcact gggggccatg accggtggtc
      421 aggccatcca gtacgtcaag ggtggccttc cggcgttgta cctgtcgggc tggcaggtcg
      481 ccggtgacgc caacctggct ggtcaggtgt acccggacca gagcctctac ccggccaact
      541 cggtaccagc cgtcgtcgag cgcctcaaca acgccctgcg tcgcgccgac cagatcgaat
      601 ggtccgaaaa caagggcgag atgctgcggg actggatggt tccaatcgtg gccgatgccg
      661 aagccggctt cggtggcgcc ctgaacgtct acgagctcat gaagcggatg cttcgagccg
      721 gagcggcagg cgtgcacttc gaggaccagt tggcctctga gaagaagtgt ggccacatgg
      781 gtgggaaggt gctgatcccg acccagcaac acgtgcgaac cctgaccgcg gcgcgactgg
      841 cggccgacgt gctcggcgtt ccttccgtcc tcatcgcccg gaccgacgcc ctggctgcca
      901 acctcatcac cagcgacgtc gacgatcgcg acaagccgtt cctgaacggt gaacggaccg
      961 ccgagggatt ctttggcacc gagccgggga tggccacgcc gatttcccgt gcgttggcct
     1021 atgccccgta cagcgacctc atctggtgtg agaccggtac accggatctt gaccaggcca
     1081 aggagttcgc cgatgccgtg catgccgagt tccccgggaa gatgctggcc tacaactgct
     1141 cgccttcctt caactggaag tcagcactgg acgacgacac gatcgccaag ttccagagcg
     1201 agctcggaaa gatgggctat aagttccagt tcatcacctt ggctggctgg cacgccctga
     1261 acgcctcggc gttcgagctg gccaagggct acacggagtc ggacatgacc gcctatgtcg
     1321 ccctacagca ggccgaattc ggcatggagg acgacggcta cacggccact cgccaccagc
     1381 gagaagtcgg tgccggctac ttcgacgatg tggccaccgt gatctccggt ggcaccgcgt
     1441 cgacactggc cctcgagggt tccaccgagg aagagcagtt ctaggacctt tactgggcat
     1501 ctggcagcgc ccctcgcggg cgtagccacc gacgcgcggt acggccccgg ctctggtcgg
     1561 ggtcgtaccg cgtccggagc ccgaccccct agcgtcacac cgtgcccggt caaccccctc
     1621 tcagcgtcac cgttctggtg gccatcaccg ccgtggccct cctggcaggt gcggtgccag
     1681 cgggtgccgt cggaaatggg agcggcggct caactgaggc gaggatcgtg a
//
LOCUS       DASCMR010000114         3695 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000562817, whole genome shotgun sequence.
ACCESSION   DASCMR010000114 DASCMR010000000
VERSION     DASCMR010000114.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3695)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3695)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3695
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000562817"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1153
                     /locus_tag="QGG16_02805"
     CDS             <1..1153
                     /locus_tag="QGG16_02805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HJP24237.1"
                     /translation="PEMIAMRDDTTIDRVRVLSPLTDESPTGVSAASYGMSLATNKAI
                     EIGEAVGVIAAQSIGEPGTQLTMRTFHTGGVAGKDLAGGLPRVVELFEAREPKGKATL
                     ARISGVVRIAEDEGRGREITVVADDGTEDVHLLQGLARLEVADGAEVRAGDAIVEGPR
                     DPKELLEIKGVRETQQYLVEEVQRVYRDQGVSIHDKHIELIVRQMTRRVKINDPGESD
                     FLPGEQVDQRLFAETNRLLVAESRRPAEGRPELMGITKASLATESWLSAASFQETTRV
                     LTEAAIECRSDKLIGLKENIIIGKLVPAGTGMEEYRRVATHAPDYKPMDFYSSADEEQ
                     DLAEWLAGQAGPGEDAFAGAYEADVIDLAGAMDAPAGADSSGEATPVAD"
     gene            1380..1751
                     /gene="rpsL"
                     /locus_tag="QGG16_02810"
     CDS             1380..1751
                     /gene="rpsL"
                     /locus_tag="QGG16_02810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020488528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HJP24238.1"
                     /translation="MPTIQQLVRKGRQSKRRKEATPALKGAPQRRGVCTRVYTTTPKK
                     PNSALRKVARVRLTSGSEITAYIPGEGHNLQEHSIVLVRGGRVKDLPGVRYKVVRGTL
                     DTSGVSQRRQARSRYGAKKEG"
     gene            1754..2224
                     /gene="rpsG"
                     /locus_tag="QGG16_02815"
     CDS             1754..2224
                     /gene="rpsG"
                     /locus_tag="QGG16_02815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013054923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HJP24239.1"
                     /translation="MPRKGPAIRRELTPDPVYRSTVVTQLVNKVLQRGKRSTAERIVY
                     SALSTVESKTGSEPVGTLKRAIDNVRPQLEVRSRRVGGATYQVPVEVRPRRANTLAVR
                     WLVNYSRDRRERTMAERLANEIMDASNGLGSSVKRREDLHKMADANKAFAHYRW"
     gene            2396..>3695
                     /gene="fusA"
                     /locus_tag="QGG16_02820"
     CDS             2396..>3695
                     /gene="fusA"
                     /locus_tag="QGG16_02820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018003270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HJP24240.1"
                     /translation="MATRHPLQKTRNIGIMAHIDAGKTTTTERILYYTGVNYKIGEVH
                     DGAATMDWMEQEQERGITITSAATSCFWDDHRINIIDTPGHVDFTVEVERSLRVLDGA
                     VAVFDGVAGVEPQTETVWRQADKYNVPRMCFINKMDRTGADFYFVLDTIRDRLGCNAA
                     VIQLPIGAEGDFAGIIDLIEMNALIWQGEDLGASWDVVDIPEDMTELAEQYRAELIDA
                     LSEFDENILEKFVGEEEITSQDVRSAVRSGTLSGDCVPILTGSAFKNKGVQPLLDAVV
                     KFLPSPVDLPPVEGVHPRSGDTLDREASDDAPFSALAFKIMTDPHVGKLIYFRAYSGV
                     LDKGSAVLNTRTGNKERLGRVLEMHANDREDRDEVRTGDIVAGIGLKNTRTGDTLCAP
                     DHPIVLEQLEFPAPVIHVAVEPRSKADQDKMSKALFSLSEE"
BASE COUNT          671 a         1241 c         1190 g          593 t
ORIGIN      
        1 gccggagatg atcgccatgc gcgatgacac caccattgac cgggtgcggg tgctgtcacc
       61 gctcaccgac gagtcgccca ccggcgtctc ggcggccagc tacggcatgt cgttggccac
      121 caacaaggcc atcgagatcg gtgaggcggt tggcgtgatc gccgcccagt cgatcgggga
      181 gcccggcacc cagctgacca tgcgtacctt ccacaccggt ggtgtggccg gcaaggacct
      241 cgctggcggt cttccccgag tcgtcgagct cttcgaggct cgcgagccca agggtaaggc
      301 caccctggcc cgcatctccg gtgttgtccg tatcgccgag gacgagggtc gtggtcgtga
      361 gatcaccgtg gtcgccgatg acggcactga ggacgtccat ctgctccagg gcctggctcg
      421 tctcgaggtc gccgacggcg ccgaggtgcg ggccggtgac gccattgtcg agggcccccg
      481 ggatcccaag gaactcctcg agatcaaggg tgtccgggag acccagcagt acctcgtgga
      541 agaggtccag cgggtgtacc gagaccaggg cgtgtcgatc cacgacaagc acatcgagct
      601 catcgtgcgt cagatgaccc gtcgggtgaa gatcaacgat cccggcgagt cggacttctt
      661 gcccggcgag caggtcgacc agcggttgtt tgccgagacg aatcgcctct tggtggccga
      721 gagccgtcgt cccgccgaag ggcgtccgga gctcatgggc atcaccaagg cctcgctcgc
      781 caccgagtcg tggctctcgg cggcctcctt ccaggagacc acccgggtgc tcaccgaggc
      841 ggccatcgag tgccggagcg acaagctcat cggcctcaag gagaacatca tcatcggcaa
      901 gttggtgcct gcgggtactg gtatggagga gtaccgacgg gtagccaccc acgcgccgga
      961 ctacaagccc atggacttct actcgtcagc cgacgaggag caggatctcg ccgagtggtt
     1021 ggccggacag gccggccctg gggaggatgc cttcgccggt gcctacgagg ccgacgtgat
     1081 cgacctggct ggcgccatgg atgcgccggc cggtgcggat tccagtgggg aggccactcc
     1141 tgtagccgac tgaccggccg ccggaccgac cctgccggga ggcggggtcg atttgtgtcg
     1201 tcggtctggc cggtggtcga cgtttggacc cggcagggac cgcccgtaga ctcgtccgtt
     1261 ggccggtgcc gcgacccggt tctgggtgtg cggtgtaccc cagagacaac ctgagttcga
     1321 gttcgagttc gagatttcca tcagaattgg cccctttcgg gccgacacga ggagcacaag
     1381 tgcccaccat ccagcagctg gtccgcaagg gccgccaatc caagcgccgc aaggaagcca
     1441 cgccggcgct gaaaggcgcg ccccagcgac gcggcgtgtg cacccgggtg tacaccacga
     1501 cgccgaagaa gccgaactcc gccctccgca aggtggctcg tgttcgtctc accagtggga
     1561 gcgagatcac ggcctacatc cccggcgagg gccacaacct ccaggagcac tccattgtgc
     1621 tggtgcgtgg tggacgtgtg aaggatctcc ccggtgtccg ctacaaggtg gtgcgtggaa
     1681 cgctcgacac ctcgggtgtc agccagcgcc gtcaggcccg tagccgttac ggcgccaaga
     1741 aggaaggctg accgtgccgc gtaaaggccc cgccattcgt cgtgagttga ccccggaccc
     1801 tgtctaccgg tccaccgttg tcacccagct cgtcaacaag gtgctgcagc gcggtaagcg
     1861 ctccaccgcc gagcgcatcg tctacagcgc cctgtccacc gtcgagtcca agaccggctc
     1921 ggagccggtc ggcacgctga agcgggccat cgacaacgtc cgcccccagc tcgaggtgcg
     1981 tagccgccgg gtcggtggcg ccacctacca ggttccggtc gaggtacgtc cccgtcgtgc
     2041 taacacgctt gccgttcgct ggctggtgaa ctactcacgg gatcgccgcg agcggacgat
     2101 ggccgagcga ctggccaacg agatcatgga tgcctccaac ggcctcggct cgtcggtgaa
     2161 gcgtcgcgaa gatctgcaca agatggccga cgccaacaaa gcgttcgccc attaccgctg
     2221 gtaggcggtt acccgaccac ccccccccac ctagaccggc ccggggcgcg caccagatgc
     2281 gtactcactg gccgtcgccg tggcgctccg gcgtctgacg gtgaaccacc tcgggtcccg
     2341 acccgggacc tgaccgaaca cgtccaccga gacagacgag acaccgagca ctgagatggc
     2401 gacgcgacac cccctccaga aaacccgcaa catcgggatc atggcccata tcgacgcggg
     2461 taagaccacg acgaccgagc ggatcctgta ctacaccggc gtgaactaca agatcggcga
     2521 ggtccacgac ggcgctgcga ccatggactg gatggagcag gaacaggagc ggggaatcac
     2581 catcacctcg gctgccacca gctgcttctg ggacgaccac cggattaaca tcatcgacac
     2641 gccgggccac gtggacttca ccgtcgaggt ggaacgttcc ctacgcgtgc tcgacggagc
     2701 ggtcgccgtg ttcgacggcg tcgccggcgt ggagccccag accgagacgg tgtggcgcca
     2761 ggccgacaaa tacaacgtcc ctcgcatgtg tttcatcaac aagatggacc gcaccggtgc
     2821 tgacttctac ttcgtgctgg acaccatccg tgatcgcctg ggctgtaacg cggcggtcat
     2881 ccaactgccc atcggtgccg agggtgactt cgccggcatt atcgacctca tcgagatgaa
     2941 cgctctcatc tggcagggtg aggacctcgg cgcatcctgg gacgtcgtgg acatccccga
     3001 ggacatgacc gaactggccg agcagtaccg ggccgagttg atcgacgcac tgtccgagtt
     3061 cgacgagaac atcctcgaga agttcgtcgg cgaggaggag atcacctccc aggacgttcg
     3121 cagtgcggtc cgctccggca ccctgtccgg cgactgcgtg ccgatcctca ccgggtcggc
     3181 cttcaagaac aagggcgtgc agccactgct ggacgccgtc gtcaagttcc tgccgtcgcc
     3241 ggtcgatctt ccgccggtcg aaggcgtgca cccgcgctcg ggcgacaccc tcgatcgtga
     3301 ggcatcggac gacgctccgt tctctgcgct ggccttcaag atcatgaccg acccgcacgt
     3361 cggcaagctc atctattttc gggcctacag cggcgtgctc gacaagggtt cagcggtgct
     3421 caacacccgg accggcaaca aggagcgcct tggtcgcgtg ctcgagatgc acgccaacga
     3481 ccgcgaggat cgcgacgagg ttcggactgg cgacatcgtg gctggcatcg gcctcaagaa
     3541 cacccgtacc ggcgacacgc tgtgcgcccc cgaccacccc attgtcctgg agcagttgga
     3601 gttcccggcg ccggttatcc acgtagccgt cgagccccgc tccaaggcag accaggacaa
     3661 gatgagcaag gccctcttct ccctgtccga ggagg
//
LOCUS       DASCMR010000115         1662 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000566336, whole genome shotgun sequence.
ACCESSION   DASCMR010000115 DASCMR010000000
VERSION     DASCMR010000115.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1662)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1662)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1662
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000566336"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..935
                     /locus_tag="QGG16_02825"
     CDS             <1..935
                     /locus_tag="QGG16_02825"
                     /inference="COORDINATES: protein motif:HMM:NF013799.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HJP24241.1"
                     /translation="PVMTSLLGGPITTVAPSTTAAALTSISTGVPPGEHGIVGYRMAV
                     GDAEVGTHDEVLNSLRWTTARGDARRRHDPRAFQPCALFGNQWPLVVTRGAFLESGFT
                     AAHLSDTRLVGYGDRLGLVDSVLDAFAGGEAFVYAYWDDIDRTAHEFGLVEHYDDELM
                     ACDAMVAELLDRLPADTAVVVTADHGQIHVGDRILELPVEVSGLIDGQSGEPRFRWLH
                     ARAGAAADLAAAAAEAFGEVAWVRSVDQVVADGWLGPVVTNPARRRLGDVAVVPHEPV
                     AIMDPAEHTSIHLIGRHGSLTSDEVFVPALCAVT"
     gene            1018..1539
                     /locus_tag="QGG16_02830"
     CDS             1018..1539
                     /locus_tag="QGG16_02830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0061136 - regulation of proteasomal protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proteasome activator"
                     /protein_id="HJP24242.1"
                     /translation="MSERDGEDSLGSVEPEVMSDPSDGSAAEGALDDEIDESIEHPAK
                     VMRVGTMMRQLLEEVRLATLDEPSRDRLREIYATSVAELGTALSPDLREELGRLALPF
                     AEDAAPSVDELRIAQAQLVGWLEGLIQGIQATLFAQQMAAQQQLAGMRRGELEPGAPD
                     EKPGPDVRPGTYL"
BASE COUNT          249 a          529 c          584 g          300 t
ORIGIN      
        1 cgcccgttat gacgtcgctg ctcggcggtc cgatcacgac ggtggcgccg tccaccacgg
       61 ccgccgccct gacgtcgatc tccaccgggg taccgcctgg tgaacacggc atcgttggct
      121 accggatggc cgtcggtgac gccgaggtgg gcacccacga cgaggttctc aactctctcc
      181 gctggacgac agcccgtggc gacgcccgtc gccgacacga cccgagggcc ttccagccgt
      241 gcgccctatt cggcaaccag tggcctctgg tggtgacccg cggggccttc ctcgaatcgg
      301 gcttcactgc cgcgcacctc tccgatactc ggctggtggg ctacggcgac cgtttgggcc
      361 tcgtcgactc ggtgctggat gccttcgctg ggggagaggc cttcgtctac gcctactggg
      421 atgacattga ccgcacggcc cacgagttcg gacttgtcga gcactacgac gacgaactca
      481 tggcctgtga cgccatggtt gccgaactgt tggatcgtct cccggccgat accgctgtgg
      541 tggtgaccgc cgatcacggt caaatccacg ttggtgaccg gatcttggag ttgccggtgg
      601 aggtgagcgg cctcatcgat ggtcagagcg gggagccccg cttccggtgg ttgcatgccc
      661 gggcaggcgc ggccgctgat ctggcggccg cggctgccga ggcgttcgga gaggtggcgt
      721 gggttcgcag cgtggaccag gtggtggccg acggttggtt agggccggtg gttaccaacc
      781 cggcgcgtcg acgtctgggc gacgtcgccg tagttcccca cgagccggtg gccattatgg
      841 atccggccga gcacacctct atccatctca ttggccgcca cggctcgttg acctctgatg
      901 aggtgttcgt ccccgcgctc tgcgcggtca cctaaggcat ttcgcccgtt gacggccact
      961 gtcagtagtg ggcgatgcgg cctagagtcc ggagcgatgg acggcggcca cgaggagatg
     1021 agcgagagag acggcgaaga ttcgctgggg tccgtcgagc ccgaggtcat gagcgacccg
     1081 tccgatggtt cggctgccga gggtgcgctc gacgacgaga tcgacgagtc gatcgagcat
     1141 ccggccaagg tgatgcgagt gggcacgatg atgcgccagc tgctcgaaga ggtccgccta
     1201 gccacgctcg acgagcccag ccgggatcgt ctccgggaga tctacgccac gtcggtggcc
     1261 gagttgggaa ccgccctgtc gccagacttg cgtgaggaac tgggccgtct agctctgccg
     1321 tttgccgagg atgcagcccc cagcgtcgac gagcttcgga tcgcgcaggc ccagttggtg
     1381 ggttggctcg aaggcctcat tcagggcatt caagccacgc tgttcgccca gcagatggcc
     1441 gcccagcagc agttggctgg gatgcgccgc ggcgagttgg aacccggtgc gccggacgag
     1501 aaaccgggcc ccgacgtgcg tccggggacc tacctgtgag cctcatgggg gagccacgcg
     1561 cggagtgcgc gcccagtggg tagcggcttt acccatctcc atgtccacac cgagttttcg
     1621 atgttggacg gggcggctcg ggtcggcgac ctggttgacg cc
//
LOCUS       DASCMR010000116         3320 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000566700, whole genome shotgun sequence.
ACCESSION   DASCMR010000116 DASCMR010000000
VERSION     DASCMR010000116.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3320)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3320)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3320
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000566700"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..424
                     /locus_tag="QGG16_02835"
     CDS             <1..424
                     /locus_tag="QGG16_02835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24243.1"
                     /translation="RVVGFDPVADLAVLAPVNHGKMPLPLALGEAVAGTVGAMLVHES
                     TGPRLVPAGIARRIRATGADIYGREADGRDALILAATVVVGHSGAAVVDGAGRVVGIT
                     FSRARGGSPVAYAVQSNALQILLERVRSSPEPAGPCVN"
     gene            complement(589..825)
                     /locus_tag="QGG16_02840"
     CDS             complement(589..825)
                     /locus_tag="QGG16_02840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HJP24244.1"
                     /translation="MKVWIDQDLCTGDGLCEEIAPDVFALLDDGLAYVKDGDKILSDP
                     GGAEAVVPVPAGQEEATIESAEECPGECIYIEVD"
     gene            1028..2818
                     /gene="arc"
                     /locus_tag="QGG16_02845"
     CDS             1028..2818
                     /gene="arc"
                     /locus_tag="QGG16_02845"
                     /EC_number="5.6.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000502 - proteasome complex [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0010498 - proteasomal protein catabolic
                     process [Evidence IEA];
                     GO_process: GO:0019941 - modification-dependent protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proteasome ATPase"
                     /protein_id="HJP24245.1"
                     /translation="MDEIKVESADDDPGNTGSGVPVDPAACKSEGSEREGLEREVAEL
                     RRRLVDSPRQIHLLESEARDASRELARANARNQKLTATIEAARERITILRDEVEKLSQ
                     PPSAYGTVLQLNDDGSADVHSSGRKMRVGIHPELVDGLHPGQEVVLNDSMSIVMARTH
                     DSTGEVVTVKEVMAGGQRAVVVGRGDEERVAELADELLGSGLRSGDSVMMDPRSGLLL
                     ETLPRPEVEDLVLEEVPDVSYEDVGGLDRQIEQIVDAVELPFLHQDLFAEYDLPAPKG
                     ILLYGPPGCGKTLIAKAVANSLAVKVSEVSGDEEARSYFLNIKGPELLNKYVGETERQ
                     IRLVFQRAREKSEQGWPVIVFFDEMESLFRTRGTGISSDIESTIVPQLLAEIDGVETL
                     RNVIVIGASNREDLIDPAILRPGRLDVKIKIERPDATAAAAIFSRYLVGDLPIDEGLI
                     ETVGGGDRNKAAMAMIDETVAEMYSDEEQNRFLEVTYQNGDKEVLHFRDFSSGAMVEN
                     IVRRAKKLAIKRQLAGGPRGIRTEDMVQSVRQEFTEHEDLPNTTNPDDWAKISGKKGE
                     RIVYVRTLVSKKTDESGGRAIEGVGTGQYL"
     gene            2856..>3320
                     /locus_tag="QGG16_02850"
     CDS             2856..>3320
                     /locus_tag="QGG16_02850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010498 - proteasomal protein catabolic
                     process [Evidence IEA];
                     GO_process: GO:0019941 - modification-dependent protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proteasome accessory factor PafA2 family
                     protein"
                     /protein_id="HJP24246.1"
                     /translation="MPVPKTLGIETEYGIVHRGVADPNPISASSLLINAYLSQRAEPG
                     SGPGSPRVGWDFVDESPAVDLRGFTPLDAMAPEIETHLVNAVLTNGARYYVDHAHPEL
                     STPECADALSIVLQDRAADHILIESMDAANAVLPDGQELVVYKNNSDGKGNSY"
BASE COUNT          607 a         1030 c         1110 g          573 t
ORIGIN      
        1 ccgagtggtt ggcttcgatc cggtggccga cctcgccgtc ctggctcccg tgaatcacgg
       61 gaagatgccc ctcccccttg cgctgggcga ggcggttgct gggacagtgg gcgccatgct
      121 ggtccacgag tcgacgggcc cgcggcttgt tcctgcaggt attgcccgac ggatccgagc
      181 gacaggggct gacatctatg gtcgagaggc cgacgggcgc gacgccctca ttctcgcagc
      241 gacggtcgtc gtagggcatt ccggcgccgc cgtggtagac ggtgccgggc gggtggtcgg
      301 catcaccttt tctcgggccc gtggtgggtc accggtggcc tacgccgtcc agtccaacgc
      361 gttgcaaatc cttcttgagc gggtccggtc gagcccggag ccggccgggc catgcgtcaa
      421 ctagcccgat tccgaacctg ggtacaggga tccaggtcct agatcgccct aaggagctag
      481 atcgccccaa ggaaagggac gctggccagg gagatcactc tgagtgcagg aaatgcgggg
      541 ctcacgggcc ggaggcagtc cgccggcctg ccatcacggg aaccggtgtc agtcgacctc
      601 gatgtagatg cactctccgg ggcactcttc ggccgactcg atggtggcct cttcctgccc
      661 ggcgggcacg ggcaccacgg cctcggcacc tcccgggtcg ctgaggattt tgtccccgtc
      721 cttcacgtag gccaggccgt cgtccaggag ggcaaatacg tcaggggcga tttcctcgca
      781 caggccatcg ccggtgcaca gatcttggtc gatccagacc ttcatcgtcg gtgaggttcc
      841 tctctgtgga cacggtcgac cgtgccgaag tgctggggcc aggccggggg gaccgacctc
      901 atcccacgtg gcgaagacca ccgggactga cgagagtgta cctacccccc gggcgtcgta
      961 atgcaccctt ctggccgggg tgaccgctgg cactggccgc tccggaggcc ggggctaggg
     1021 tcgcctcgtg gacgagatca aggtggagtc agccgacgac gacccgggga atacgggaag
     1081 tggtgttccc gtggaccctg cggcctgcaa gagcgagggt tcggaacgag agggcctgga
     1141 acgcgaggtc gccgagctcc gtcgccgtct ggtcgactcg ccccgccaga tccacctcct
     1201 ggagtcggaa gcccgtgacg ccagccgcga gctggcccgt gccaatgctc ggaaccagaa
     1261 gttgacggcc accatcgagg cggcgagaga gcgaatcacc atattgcgcg acgaggtcga
     1321 gaagctctcc cagccgccgt cggcctacgg gacggtgctg cagttaaatg acgacggttc
     1381 ggctgatgtg cactccagcg gccggaagat gcgcgtcggc atccaccctg aactggttga
     1441 cggcctccac ccgggccagg aggttgttct caacgactcc atgagcatcg tcatggcccg
     1501 aacgcacgac agcaccggcg aggtggtgac cgtcaaggag gtcatggccg gaggtcagcg
     1561 ggccgtggtg gtcggtcggg gtgacgagga acgtgtggca gagctagccg acgagctgct
     1621 cgggagtggc ctccgtagcg gtgattcggt gatgatggac ccgcgttctg gactcctcct
     1681 ggagaccctt cctaggcccg aagtcgagga cctggtactc gaggaggtcc cagacgtctc
     1741 ctacgaggac gtcggcggac tggatcgcca gatcgaacag atcgtggacg ccgtggagct
     1801 gccgtttctg catcaggacc ttttcgccga gtacgacctg ccggcaccca agggaatatt
     1861 gctgtacggg cctccgggct gcggaaagac gctcattgcc aaggcggtgg ccaactctct
     1921 ggccgtcaag gtctccgagg tgtccggcga tgaggaagcc cggagctact tcctgaacat
     1981 caagggtccg gagctgttga acaaatacgt cggcgagacc gaacgccaga tccgtctggt
     2041 cttccagcgg gctcgggaga agtccgagca gggctggcca gtcattgtgt tctttgatga
     2101 gatggaatcc ctctttcgca cgcggggaac cggtatcagc tcggatatcg agtcgaccat
     2161 cgtgccccag ttgcttgccg agatcgacgg tgtggagacg ctccgcaacg tgatcgtgat
     2221 cggagcgtcg aaccgagagg atctcattga cccagccatt ctgcggcccg gccggctcga
     2281 cgtgaagatc aagatcgagc gtccggacgc tacggctgct gcggccatct tctcccgcta
     2341 cctagtgggt gacctgccca tcgacgaggg cctgatcgag acggtcggtg gcggcgaccg
     2401 caataaggcg gctatggcca tgatcgacga gactgtggcc gagatgtaca gcgacgagga
     2461 acagaaccgc ttcctcgagg tgacgtacca gaacggcgac aaggaggtcc ttcacttccg
     2521 ggacttctcc tcgggggcca tggtggagaa catcgttcgc cgggccaaga aattggccat
     2581 caagcgccag ttggccgggg gaccgagagg cattaggacc gaggacatgg tgcagtcagt
     2641 tcgtcaggag ttcacggagc acgaggacct accgaacacc accaaccccg acgactgggc
     2701 caagatttct ggcaagaagg gggagcggat cgtatacgtg cggaccctgg tctccaagaa
     2761 gaccgacgag tccggtggtc gggccatcga aggcgtcggc accgggcagt acctctaggg
     2821 cctacgccct ggaccaggtt gccgaccgct ggaccatgcc tgttcccaag acgctcggca
     2881 tcgagacgga gtacggcatt gtccaccgcg gtgtggctga ccccaatccg atcagtgcct
     2941 cctctctact catcaacgcc tacctgagtc agcgggccga gccggggagc ggcccggggt
     3001 ccccccgggt gggatgggac ttcgtcgacg agtcgcctgc cgtggacctc cgtggtttca
     3061 ctccgttgga cgccatggcg cccgagattg agacccatct cgtcaacgcg gtcctcacaa
     3121 acggtgcccg ctactacgtg gatcacgccc accctgagtt gagcacaccc gagtgcgccg
     3181 acgcgctctc gatcgtgctc caagatcggg cggcagacca catccttatt gagtcaatgg
     3241 acgccgccaa cgccgtgctt ccggacggcc aggaattggt ggtgtacaag aacaactcgg
     3301 atggcaaggg caacagctac
//
LOCUS       DASCMR010000117         4175 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000574479, whole genome shotgun sequence.
ACCESSION   DASCMR010000117 DASCMR010000000
VERSION     DASCMR010000117.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4175)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4175)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4175
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000574479"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(174..1220)
                     /gene="ribD"
                     /locus_tag="QGG16_02855"
     CDS             complement(174..1220)
                     /gene="ribD"
                     /locus_tag="QGG16_02855"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012229402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HJP24247.1"
                     /translation="MVEQADDLTPGTSGDGPAMDAAIAAAATARYRTSPNPWVGSVVL
                     VDGLIVGTGATEPPGGAHAERSAMDAATLANGGSIVGSTLVTTLEPCHHEGRTGPCTE
                     AIVAAGVARVVVAIEDPDPQVAGRGIAHLRDAGLDVVVGIRAVEVAEQLAPYLHHRRT
                     GRPQVVLKMAITLDGRIAAPDGSSRWITGPEARADVHRMRAESDAVCVGSGTVRADDP
                     RLDVRDWPEADAMGSTDPRRIVLGAIPDGARVLPAEEHHGDLGVLLDRLGDEGVLQLL
                     VEGGAEVAGRFHREGLVDRVVAYVAPALLGGDDGRPLLAGAGVATMAEAWRGRFTDVR
                     RLGDDLRIELVPDA"
     gene            complement(1213..1761)
                     /locus_tag="QGG16_02860"
     CDS             complement(1213..1761)
                     /locus_tag="QGG16_02860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015799081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030151 - molybdenum ion binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MogA/MoaB family molybdenum cofactor
                     biosynthesis protein"
                     /protein_id="HJP24248.1"
                     /translation="MDAHDHGPAGETPADPVLVVKVLTVSDGVVHGVREDRSGAALVA
                     LCDDQGWHVAETAVTADGVDEVAGALQRLAEGFHGLIVTTGGTGFGPRDLTPEGTLAV
                     LGRQAPGLAEAMRLVSPLGRLSRGVAGTLGTALVVNTPGSARGCVECLEAVADVVPHA
                     VRLLVDNADPHPSGEGSGGGHG"
     gene            1830..2651
                     /locus_tag="QGG16_02865"
     CDS             1830..2651
                     /locus_tag="QGG16_02865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HJP24249.1"
                     /translation="MARPMDIDALAGYEIDEFAHGGTTRTVLRTGSGPAVIVMAEMPG
                     ITPRVADFGRRVAAIGCTAVLPSLFGTPGRRATPGYILRSLAGGCVSREFTAFLRRRT
                     SPVTDWLRALAAFEHGRCGGPGVGAVGMCFTGGFALGMMVDRRMLAPVLSQPSLPLPI
                     GGRRRRSLGISNRDLEIVRERVRGDRGDDAGVCVLGLRFSEDSMAPAERFERLAEEFG
                     DGFIGVEIDSSPGNEHRISKRAHSVLTDELVDEPGHPTRDALDAVLEHLRVGLLA"
     gene            complement(2640..3827)
                     /locus_tag="QGG16_02870"
     CDS             complement(2640..3827)
                     /locus_tag="QGG16_02870"
                     /inference="COORDINATES: protein motif:HMM:NF013362.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HJP24250.1"
                     /translation="MGDARGLAIEVLGRIEHDGAYANLALRAALDRSDLERRDRAFVT
                     DMVYGTTRMRRACDHLVDRFLHDEIQPEVRTVLRLGAWQLAFGGVPAHAAVSATVAVA
                     PRRVRGLCNAVLRRVADEQRAGAPPWPSPAVALSCPEKVLDRLVTDLGEADAMAAMES
                     MNRPAPAVVRDDGYYQDRASQLVVEAVLAPDLGDREASGAGTPVGERILDLCAAPGGK
                     ATALAASGGRVVACDLRERRLGLVADNARRLERDLLLVAADGRATPFRSGSFDRVLVD
                     APCSGLGVLRRRADARWQEGRFTDVAISELADLQVELLNGAVDLVASGGLLAYSVCTL
                     TAAETSGVDRRIRAAHPTLVPEPVGEPWRPHGDDGGGGLLMPQDLDSEGMAVFMYRVG
                     SGQ"
     gene            complement(3820..>4175)
                     /locus_tag="QGG16_02875"
     CDS             complement(3820..>4175)
                     /locus_tag="QGG16_02875"
                     /inference="COORDINATES: protein motif:HMM:NF014908.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24251.1"
                     /translation="LEASEPQQGEPTWAHKIGSGDLWLDWSRSATELDRMVRVGGAHT
                     TFRGERFKVHSAVPCDGPANGPSPGTLVGDMVATGSGGLRLVEVQPANRARMTFGAWV
                     TGARPTDGEGFASDG"
BASE COUNT          659 a         1505 c         1382 g          629 t
ORIGIN      
        1 atggttgccc ggtagtcgac cgaggaattt cgttggaccc ccaggtcggc accctcgaac
       61 aggtcgagag tggacttttc aagggaaccc ttgggaagga cgagtttcag cacgacacga
      121 acctacccgt cgggaccgcc gccgccgccg gggatttcag ctcccgaacg ggttcaagcg
      181 tcgggtacca gctcgatgcg aaggtcgtca ccgagacgcc ggacgtcggt gaaccggccg
      241 cgccacgcct cagccatggt ggccactccg gcaccagcca acagaggccg gccgtcatcg
      301 cctcccagca gggccggggc cacgtaggcc accacacggt cgaccagtcc ctcgcggtgg
      361 aaccgtccgg ccacttcggc gccgccttcc accagcaact gcagcacacc ctcgtcaccc
      421 agccggtcga gcaggacgcc caggtccccg tggtgttcct ctgcgggtag tacccgcgcg
      481 ccatcgggaa tagcgcccaa cacgatgcgg cggggatcgg tcgaacccat cgcatcggcc
      541 tcaggccagt cccggacgtc gaggcgggga tcatcagctc gcacagttcc cgatcccaca
      601 cagaccgcgt cgctttccgc ccgcatccgg tgcacgtcgg cacgggcctc aggaccggtg
      661 atccaccggc tcgacccgtc gggggcggcg atgcgtccgt ccagtgtgat ggccatcttc
      721 aagacgacct gcgggcgacc ggtcctccgg tggtggaggt acggcgccaa ctgttcggcg
      781 acttctacgg cacgaatgcc gacgaccacg tccagaccgg catctcgtag gtgggcgatg
      841 ccccggccgg ccacctgcgg gtccgggtcc tcgatggcca ccacaacacg ggcaactccg
      901 gcggcaacga tggcctcggt acatggtccc gttcgacctt cgtggtggca cggctccaac
      961 gtggtcacca acgtggagcc gacgatcgat ccgccgttgg ccagcgtcgc ggcatccatg
     1021 gccgagcgtt cggcgtgtgc gccgccgggc ggttcggtgg cacccgtgcc gacgatcagg
     1081 ccgtcgacca ggaccacgga acccacccag ggattcggcg acgtccggta gcgagcggtc
     1141 gccgccgcgg caatggccgc gtccatggcc ggcccgtcgc ccgacgttcc gggggtcagg
     1201 tcgtcggcct gttcaaccat gaccgccacc ggatccttcg ccggagggat gcgggtcggc
     1261 attgtcgacc aacaggcgga cggcgtgggg aaccacatcg gccaccgcct ccaggcattc
     1321 gacgcagcct cgcgccgaac ccggggtgtt gacgaccagt gcggtgccca gcgtgcctgc
     1381 gacaccgcgc gataggcggc ccagtggact gaccaggcgc atcgcttcgg ccagaccagg
     1441 agcctgacgg cccaggactg cgagcgttcc ctctggggtg aggtcgcgcg ggccgaaccc
     1501 tgtgcctccg gtggtcacga tcaggccgtg gaagccttca gccagccgct gtagcgcccc
     1561 tgccacctca tcgacgccgt cggccgtcac cgcggtctcg gccacgtgcc acccctgatc
     1621 gtcgcagaga gcgacgaggg cggctccgga gcggtcttcg cgaaccccgt gcaccacacc
     1681 gtccgagacg gtcaggacct tgacaaccag taccggatca gcgggcgtct cgccggccgg
     1741 cccgtgatcg tgtgcgtcca tccccggacg ataccggagg ccccgtcgac gccccgatcc
     1801 ggcccggtgt ccgggagtac cctcagccga tggctcgacc gatggacatc gatgcactgg
     1861 ccgggtacga gattgacgag ttcgcccacg gtgggaccac ccggaccgtg ctgcggaccg
     1921 gcagtgggcc ggcggtcatc gtcatggccg agatgcccgg catcactccc cgggtagccg
     1981 acttcgggcg acgggtggcc gccatcggct gcacggccgt ccttccttcg ttgttcggaa
     2041 cgccgggacg tcgggccacc cccggctaca tccttcgatc gctggctggc ggatgcgttt
     2101 cacgggagtt cacggccttc ctgagacgcc gcacctcgcc ggtgaccgac tggctgcggg
     2161 cgctggccgc cttcgagcac ggccgttgtg gcggcccggg cgttggcgcg gtcggcatgt
     2221 gcttcaccgg aggattcgca ctcgggatga tggtcgaccg gcggatgctg gccccggtgc
     2281 tcagccaacc cagcctgccg ctgcctattg gtggtcggcg acgacgatcg ttgggcatat
     2341 cgaaccggga tctggagatc gtgcgggagc gggtgcgtgg cgaccgaggg gacgacgctg
     2401 gtgtctgtgt tctgggcctc cggttcagcg aggattccat ggcccctgcc gagcgcttcg
     2461 agcggctggc cgaggagttc ggcgacggct tcattggcgt ggagatcgac tcgtcaccgg
     2521 gcaacgagca ccggatctcc aagcgggccc actcggtgtt gaccgacgaa ctggtcgacg
     2581 agccgggtca cccgacgcgc gacgcactcg atgcggtgct cgaacacctc agggtcgggc
     2641 tactggcctg acccgacccg gtacatgaag accgccatcc cctcgctgtc caggtcctga
     2701 ggcattagaa gccctccacc accatcgtcg ccatggggtc gccacggctc ccccaccggc
     2761 tcgggaacca gcgtcgggtg ggcggcccgg atccgacgat cgaccccgga ggtctcggca
     2821 gccgtcagag tgcacacgct gtaagccagc aggccccctg atgccacgag gtcgacggca
     2881 ccgttcagta gttccacctg caggtcggcc aactcgctga tcgcgacatc ggtgaaccgg
     2941 ccctcctgcc agcgggcatc agcccggcgt cgcaggaccc cgaggcccga acacggggcg
     3001 tccaccagaa cccggtcgaa cgaacccgat cggaaaggcg tcgctcgacc gtcggctgcg
     3061 accagcaata ggtcacgctc cagccggcgg gcgttgtcgg ccacgagccc gaggcgtcgt
     3121 tcccgaaggt cgcaggccac cacccggcca cccgacgcgg ccagcgccgt ggccttccct
     3181 ccaggtgccg cgcagaggtc caggatccgt tcaccgacag gtgttccggc tcccgacgct
     3241 tccctgtcac cgaggtccgg ggccagtacc gcctcgacca ccagctggga ggctcgatcc
     3301 tggtagtagc cgtcgtcacg caccacggcg ggtgccggac gattcatgga ttccatggcc
     3361 gccatcgcgt cggcctcgcc aaggtcggtc accagccggt ccaacacctt ttcggggcaa
     3421 ctcagggcca cagccggcga cggccagggc ggtgctcctg cccgttgttc gtcggcgact
     3481 cgacgcagca cggcgttgca caggccgcgc acccgtcggg gtgccacggc gacggtggcc
     3541 gagaccgcgg cgtgtgccgg aaccccaccg aaggccagtt gccaagcacc cagacgaagc
     3601 accgtgcgga cctcgggctg gatctcgtca tggaggaacc tgtccaccag gtggtcgcag
     3661 gcccgtcgca tccgggtcgt gccgtacacc atgtcggtga cgaacgcccg gtcccgtcgc
     3721 tccaggtcgg accggtccag cgcggcccgt agcgccaggt tggcgtacgc cccatcatgt
     3781 tcgatgcgtc ccagcacctc gatggccaac cctcgggcat cacccatcag aagcgaaccc
     3841 ctcgccatcg gtcgggcggg caccggtcac ccacgcaccg aatgtcattc gggcccgatt
     3901 ggccggttgg acctcgacca ggcgcaggcc accggatcct gttgccacca tgtctcccac
     3961 cagcgttccg ggggaaggac cgttggcggg cccatcacac ggaacggccg agtgcacctt
     4021 gaaccgttcg ccccggaatg tggtgtgagc gccgcccacc cggaccatcc ggtccaattc
     4081 ggtggccgaa cgggaccagt ccaaccacag gtcaccgctc ccgatcttgt gggcccacgt
     4141 gggttctccc tgctggggct cggaggcctc gaggc
//
LOCUS       DASCMR010000118         1552 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000579419, whole genome shotgun sequence.
ACCESSION   DASCMR010000118 DASCMR010000000
VERSION     DASCMR010000118.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1552)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1552)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1552
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000579419"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(11..856)
                     /locus_tag="QGG16_02880"
     CDS             complement(11..856)
                     /locus_tag="QGG16_02880"
                     /inference="COORDINATES: protein motif:HMM:NF014703.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HJP24252.1"
                     /translation="MPILHAILLGLVQGLTEFLPVSSSGHLELVPWLLGWEDFGGDGR
                     LEDAFEVALHVGTLAGAVFYLRADVVRYLRAALTWIRSGVGTVPVGDARTACLLAVTA
                     VPTGILGVLVAFMIDDLGDRMWLVATCLIVFGLVLWATDRRGATAGEATSRGMADLSF
                     RNAIVLGVAQGLAFQPGVSRSGVTLSVARSLRVERTEAARLVFLMSLPVIAGAGLLSA
                     VDVTVPAGWWPPFLAGMAAAAVSGWFAVHGLLRLLARIGLGGFAAYRVAVGLGILALL
                     ATGVR"
     gene            complement(874..>1552)
                     /locus_tag="QGG16_02885"
     CDS             complement(874..>1552)
                     /locus_tag="QGG16_02885"
                     /inference="COORDINATES: protein motif:HMM:NF039907.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="metallopeptidase TldD-related protein"
                     /protein_id="HJP24253.1"
                     /translation="KPASGRIAVVLDPWVSAQFLGIVAGTLNGESVQKGRSLFADRLG
                     DEVASPLLTLVDDPTDPAATSATATDGEGLATRRNVLVSGGRLERFVHNSETARRAGT
                     ASTGSAVRSYSSTPGVGVRAVSIRGGDRTPAELVAGIDDGVLVQGVSGLHSGVNPVSG
                     DFSTGAEGLRIRGGELAEPIREFTIASTIQKMLTDLVAIGDDVQWLPMRAAGVTLVFG
                     ELTVSGV"
BASE COUNT          312 a          562 c          482 g          196 t
ORIGIN      
        1 cgccagtcga ctagcggacg ccggtagcca acagggccag aattccgagg cctaccgcca
       61 cgcgataggc ggcgaaccct ccgagtccga tccgggccag caggcgcagt aggccatgga
      121 cggcaaacca gccacttacc gcggcggccg ccatcccagc gagaaacggg ggccaccaac
      181 cggcgggcac cgtcacgtca acggccgaca gcaggcccgc cccggctatg accggcaggc
      241 tcatcaggaa gaccagtcgg gcggcctcgg tgcgttccac ccgcagcgac cgagcaacgc
      301 tcagggtcac ccccgaacga gacactccag gttggaaagc taaaccctga gccactccca
      361 gaacgatggc gttgcggaag gagaggtcag ccatgccccg gctcgtcgcc tcaccggcgg
      421 tcgccccacg gcggtcggtg gcccacaaca caagtccgaa cacgatcagg caggtggcca
      481 ccaaccacat ccggtccccg aggtcgtcga tcatgaacgc caccagcaca ccaaggatcc
      541 ccgtgggcac cgcagtcaca gccagcaggc aggccgtccg ggcatccccg acgggaacgg
      601 tgccgacacc ggaccgaatc caggtcagag cggcccgcag gtaccggacc acgtcagccc
      661 gcaggtaaaa caccgctccg gcaagggtgc ccacgtggag ggcaacctcg aaggcatcct
      721 ccaagcgacc atcgccaccg aagtcctccc aacccaatag ccatggcacg agttctaggt
      781 ggccgctgga cgagacgggc aggaactcgg tcaggccctg caccaggccc aacaggatgg
      841 cgtgcaggat cggcatggtc tgcgggctgg gccctacacc cccgagactg tcagctcgcc
      901 gaaaaccagt gtgactccgg ccgcccgcat gggcagccac tgaacgtcgt caccaatggc
      961 caccaggtcg gtgagcatct tctggatggt cgaggcaatg gtgaactcac ggatcggttc
     1021 ggccagttcg ccaccccgga tccgaaggcc ctcggcgccc gttgagaagt cgccactgac
     1081 cgggtttacc cctgagtgca gcccgctgac gccctggact aagacaccgt catcgatccc
     1141 ggccaccaac tcagccggcg ttcggtcccc gccccgaatg gacacggccc gaaccccgac
     1201 gcccggcgtt gacgagtagc tacggaccgc cgaaccggtg gacgcggtgc cggcccgacg
     1261 ggccgtctcg ctgttgtgca cgaatcgttc gagacgacca ccggaaacca gcacgtttcg
     1321 gcgcgtagcc aagccttctc cgtcggtcgc cgtggctgag gtggccgccg ggtccgtggg
     1381 atcgtcgacc agggtgagca gcggcgaggc cacctcatcc cctaggcggt cagcaaacag
     1441 ggaccgtccc ttctgaaccg actcgccgtt gagggtgccg gccacgatcc ccagaaactg
     1501 ggcgctcacc catgggtcga gtaccacggc gatccgccct gatgcaggct tg
//
LOCUS       DASCMR010000119         4060 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000580471, whole genome shotgun sequence.
ACCESSION   DASCMR010000119 DASCMR010000000
VERSION     DASCMR010000119.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4060)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4060)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4060
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000580471"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..595)
                     /locus_tag="QGG16_02890"
     CDS             complement(<1..595)
                     /locus_tag="QGG16_02890"
                     /inference="COORDINATES: protein motif:HMM:NF039484.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24254.1"
                     /translation="MPRGLAAGLLIAAAVPPWGWWPAAFIGLALLDRLVADRPLSSRF
                     RRGLLVGAAWAFPSTVWMLDLTPVGWLAAGLLHAGWLGLAAAAVPPGRWRRLGLVGTV
                     TLAELVRWSVPFGGAPLASIALGQAGGPLAPVVRIAGPLLLVALTVAVGMGLSVLFDG
                     RRADGASAATGAVVVAVLAVAAVLSAVAPTGRPVGTLD"
     gene            complement(632..1231)
                     /locus_tag="QGG16_02895"
     CDS             complement(632..1231)
                     /locus_tag="QGG16_02895"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HJP24255.1"
                     /translation="MSPATTPARDAADSRPGSGTEHPDELGLLDDETSVHLSVERTFC
                     FADLSGFTRLTEEKGPHESVEILEEFRAMSRRVAAWRGVRVAKWLGDGVMLVGTEPTP
                     TIAWAGHLIDHFATARKINLRVGLATGEALLFEGDDYIGKPVNLAAKLCAVAAPGEIL
                     ASCEVADLPSWIRVESVDDLNIRGAGTFGGIQRLAVVAH"
     gene            complement(1336..2799)
                     /gene="hemG"
                     /locus_tag="QGG16_02900"
     CDS             complement(1336..2799)
                     /gene="hemG"
                     /locus_tag="QGG16_02900"
                     /EC_number="1.3.3.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR00562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004729 - oxygen-dependent
                     protoporphyrinogen oxidase activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase"
                     /protein_id="HJP24256.1"
                     /translation="MPERRVPARQILVIGGGITGLTAGYRLAVDHPEIDVTVLEASDR
                     PGGYLRTGPLDDPMLDGLPIDAGADAFLVRVPWALDLCVELGIDNELVSPSARKASLW
                     LDDALWPIPSPNVLGVPLDPRTVAPGLLAPADLERLAGDGVPDVPIGGTLDGARGTSG
                     DLSVGAVIRACVGDRVFERLVDPMLGGINAGRADDLSCAVMAPQLLAPARSTEGLLAG
                     LRRTAAAPAAPVFNSPAAGMERIVEALVAVLEDRLRTGSPVTRLDRAPDGDTSDRQVA
                     GWVATTASGTYRADAVVLAVPAHVAATLVAPHSSDAGQFLAGWRHASVALATFAFDRA
                     DLEVPADQSGFLVGRATNQGPSPLMTACSFAGSKWAHLDHPERTVLRVSCGRIDDKRP
                     AGLTDDELIAALRADLATTLGVEAPPTAIRLERFPDSLVQFPVGHIDRITALDSLLDD
                     ATPGLLVTGTVRNGVGIPACIRSGTEAAEAAVAAATR"
     gene            complement(2815..3858)
                     /gene="hemE"
                     /locus_tag="QGG16_02905"
     CDS             complement(2815..3858)
                     /gene="hemE"
                     /locus_tag="QGG16_02905"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: protein motif:HMM:NF013381.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HJP24257.1"
                     /translation="MDDPSLRTSPFLAACRAEPHDHTPVWFMRQAGRSLPEYRAVRGT
                     GSILDAIADPELSAEITMQPVRRYGVDAAILYSDIVVPAHAVGFGVDVKPGLGPVVDR
                     PFERAADLQRLRPLEPEIDTPYVLETVRQVVTEADVPLIGFAGAPFTVASYLIEGEPS
                     RTYGKTKALMLGDPGLWHDLMERLADMAITSLRSQIDAGVSAIQLFDSWAGALSPPVY
                     ERCVLPYSRRVFEGVVDTGVPRIHFGVGTGEILPLMADAGSDVVGVDWRVPLDEARRR
                     LGPDAILQGNLDPAVCLGPLEVIEAEVADVLARNGGHPGHVFNLGHGVLPEIDPAVLE
                     RVVAQVHAFPLGA"
     gene            complement(3868..>4060)
                     /locus_tag="QGG16_02910"
     CDS             complement(3868..>4060)
                     /locus_tag="QGG16_02910"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24258.1"
                     /translation="LVLDPTASDLADRKVLADGSSHRDKHGLSDICEAARVSALARLA
                     LPEATRARRLLTSAAETPR"
BASE COUNT          697 a         1346 c         1442 g          575 t
ORIGIN      
        1 cgtcaagggt gcccaccggt cggccggtcg gagccacggc ggacaggacg gctgctacgg
       61 ccagcacggc gacgaccacg gccccggtgg ctgccgaggc accgtcggcc cgacgcccgt
      121 caaacagcac cgacaggccc atgccgacgg ccactgtgag cgccaccagc agcagcgggc
      181 cggcgattcg gactaccggt gccagcggac caccggcctg tccgagcgcg atgctggcca
      241 acggggcacc gccgaacggc acactccacc gaacgagttc ggcgagggtc actgtgccga
      301 caaggccaag gcgtcgccat ctcccgggtg ggacggcggc ggcggccagg cccagccatc
      361 cggcgtgaag caggccggcg gccagccagc cgaccggggt caggtccagc atccagaccg
      421 ttgacgggaa ggcccaggct gctcctacca gcaggccccg acggaacctc gatgagagcg
      481 gccggtcggc caccagacga tccagaaggg ccagccctat aaaggcggcc ggccaccatc
      541 cccacggggg gaccgccgcg gcgatcagca gcccagcggc cagcccccgg ggcacccaga
      601 cttcacgatc aaccgtcaat gagtagtcac gtcagtgggc cacgacggcc aggcgctgga
      661 tgcccccgaa ggtgcccgca ccacggatat tgaggtcgtc gaccgactca acgcggatcc
      721 acgacggtag gtcggctacc tcgcagcttg ccaggatctc gcccggtgct gccaccgcgc
      781 agagtttggc tgccaagttc accggcttac cgatgtagtc gtcgccttcg aacaacaggg
      841 cctcgccggt ggccagcccg acccgcaggt tgatcttgcg ggcggtggcg aagtggtcga
      901 tcagatgtcc agcccaggca atggtcggcg ttggttcggt gccgaccagc atcacgccgt
      961 cgcccaacca cttggccacc cgtacgcccc gccatgccgc cactcgacgg gacatcgcac
     1021 gaaactcctc gaggatctcg acagattcgt ggggcccctt ctcctcggtt aggcgggtaa
     1081 agccgctgag gtcggcgaag cagaacgtcc gctcgactga caggtgcacg gaggtctcgt
     1141 catcgaggag gccgagttcg tctgggtgtt cggtgccgct gccagggcgg gagtcggcag
     1201 cgtcgcgtgc gggggtggtc gccggggaca tccctccatc gaaccacgcc ggaggccccg
     1261 gaccacggcg gtttggagga aatcccggtc cgggcacaca gtcgccgtcc gcgagcctgc
     1321 ccagaggccc ggatttcatc tggttgctgc ggctaccgct gcctcggcgg cctcggtgcc
     1381 cgaccggatg cacgccggaa tgcccacccc gttgcggacg gttccagtca ccaataggcc
     1441 gggcgttgcg tcgtccagca ggctgtcgag ggcggtgatc cggtcgatgt gacccaccgg
     1501 gaattgcacg agcgagtcgg ggaaacgttc gaggcggatg gcggtgggtg gcgcctcgac
     1561 gcccagggtg gtggccaggt cggcccgcag cgcggcgatt agttcatcat cggtcagccc
     1621 ggcgggacgc ttgtcgtcga tccgaccgca cgacacccgc agcacggtgc gttccgggtg
     1681 gtcgagatgg gcccacttgg atccggcgaa cgagcaggcg gtcatgagtg ggctcggtcc
     1741 ctggttggtg gcccgaccaa cgaggaagcc gctctggtcg gcgggaacct cgaggtcggc
     1801 ccggtcgaag gcgaaggtgg ccaacgccac cgaggcgtgg cgccagccgg caaggaactg
     1861 accggcgtcg ctgctatggg gagccacaag cgtggcggcc acgtgggccg ggacggcgag
     1921 gaccacggcg tcggcgcgat aggtcccaga cgcggtggtg gctacccagc ccgcgacctg
     1981 tcgatcagaa gtgtcgccgt caggtgcacg atccaggcgg gtgaccggag atccggtgcg
     2041 gaggcgatcc tcgaggacgg ccaccagggc ctcgacgatt cgttccatcc cggccgccgg
     2101 tgagttgaag accggagcgg caggagcggc cgcggtccgc cgtagaccgg ccagtaggcc
     2161 ctcggtggat cgggcaggag ccagcagttg gggcgccatg acggcgcaac tcaggtcgtc
     2221 ggcccgtccg gcgttgatcc cgccgagcat cggatccacg agccgttcga acacccggtc
     2281 accgacacac gcccggatga ccgccccgac gctgagatcg ccgctcgttc cacgggcgcc
     2341 gtcaagggtg ccgccgatag gcacgtcggg cacgccgtcg ccggccagcc gttctaggtc
     2401 ggctggtgcc agcagcccgg gggcgaccgt tcgagggtcg agtggcacgc ctagaacgtt
     2461 gggtgacggg atgggccaca gggcgtcgtc caaccacaac gaggcctttc gggccgacgg
     2521 agagaccagc tcgttatcga tgccgagctc cacgcacagg tccagggccc acggcacccg
     2581 aaccaggaac gcatcggcgc cggcatcgat cggcagcccg tccagcatcg ggtcgtctag
     2641 aggcccagta cgcaggtaac caccgggccg gtctgatgcc tcgagcaccg tgacgtcgat
     2701 ctcagggtgg tcgacggcta gtcggtatcc ggcggtcagg ccggtgatgc cgccaccgat
     2761 caccaatatc tgacgtgcag gtacccgtcg ctcaggcatc cggctgacca ttgatcaggc
     2821 cccgagtgga aaggcgtgga cctgagcaac gacccgttcc aggacggcag ggtcgatctc
     2881 gggaagcacg ccgtggccga ggttgaacac gtgcccgggg tgaccaccgt tgcgggccag
     2941 gacgtcggcc acctcggctt cgatgacctc gaggggaccg agacagaccg cggggtcgag
     3001 gttgccctgg aggatggcgt ccggcccgag tcgacgacgt gcctcgtcca gcggcacccg
     3061 ccagtccaca ccgaccacgt cggagccggc gtcggccatc aggggaagga tctcaccggt
     3121 tcccacgccg aagtggatgc ggggcacgcc ggtgtcgacc accccttcga acacccgtcg
     3181 gctgtacggc aggacgcatc gttcgtagac cggtgggctg agcgctccgg cccaactgtc
     3241 aaacagctgg atggccgaca ccccggcgtc gatctgggac cgcaacgacg taatggccat
     3301 gtcggccaga cgttccatga ggtcgtgcca taggcccgga tcaccgagca tcagggcctt
     3361 ggtcttccca taggtgcggg acggttcacc ctcgatcaga taggaggcca cggtgaatgg
     3421 cgccccggcg aagccgatta gcggtacgtc ggcctcggtt accacctgtc ggaccgtttc
     3481 aagcacgtac ggggtatcga tctcgggttc cagcgggcgg agacgttgga ggtcggcggc
     3541 ccgctcgaag ggtcggtcta ctactggccc gaggccgggc ttcacgtcga caccgaagcc
     3601 gacggcgtgg gccgggacga cgatgtcgga gtagaggatg gccgcgtcga cgccgtagcg
     3661 tcggaccggc tgcatggtga tctcggcgga tagctccgga tcggcaatgg cgtccagaat
     3721 gctgcccgtc ccccgaacgg cccgatattc ggggagcgac cggccggctt ggcgcatgaa
     3781 ccagacagga gtgtggtcgt gtggttcggc ccgacacgcg gccaagaagg ggctggttct
     3841 gagggaggga tcgtccacgg atcgacgcta ccggggagtt tcggcggcac tggtcaggag
     3901 tcgccgtgcc cgggtggctt caggcaaggc gaggcgggcc agagcggaga cccgggctgc
     3961 ctcacagata tcggacaggc catgcttatc ccgatgcgaa gatccgtcgg ccagcacttt
     4021 gcggtcggcc aggtcgctgg ccgtggggtc caagaccaga
//
LOCUS       DASCMR010000120         5183 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000585330, whole genome shotgun sequence.
ACCESSION   DASCMR010000120 DASCMR010000000
VERSION     DASCMR010000120.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5183)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5183)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5183
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000585330"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..984)
                     /locus_tag="QGG16_02915"
     CDS             complement(<1..984)
                     /locus_tag="QGG16_02915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate synthase"
                     /protein_id="HJP24259.1"
                     /translation="MCGIIAILRRPPSRDVPTAESILTLLVDATALLGGPDGPQMADR
                     VTTAAGQIAEADRLLGGLPGLLALDRDAGLAGRITAALADLPDQIAGMEAVLERRVTT
                     PDGSDSSDGVEVANAALVALRDAVWGVTRDRLGTHVGVGSLRSPRIAPSDAGLGVLLS
                     IQQALSAIDRLEVRGRDSAGIQVTVWNHDLAADDPEVAGRTVDGLHRTGSVRVLDGGG
                     LAFVVKAAAEIGELGDNTAVLRASLAADGLLARALVAPGVEGSILGHTRWASVGLISE
                     SNAHPVDSVRADGVAVPLVTAVLNGDVDNHADLMVSEGLSVAPEITTDAKVI"
     gene            complement(1104..2534)
                     /locus_tag="QGG16_02920"
     CDS             complement(1104..2534)
                     /locus_tag="QGG16_02920"
                     /inference="COORDINATES: protein motif:HMM:NF014877.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24260.1"
                     /translation="MTGRSVHPPSSGPAASGQVLRFGTDGVRARAGSVLDEPAVRALG
                     RAAAAHLGADCVVIGRDTRESGPALALALAEGLVDGGLDVTSLGVVPTPTVAHECQID
                     GVAGAVVSASHNPWFDNGIKLFAAGGRKLDDRVQSAIQEAWDACPRLDGPRVAPDWDD
                     PSEETAAGRRWVEALIRWAIYEGSLDGREVARQQVDERPLAGRSLVVDCANGATSAFA
                     ADILRRLGAEVGVIHASPDGRNINEGCGSTHPDDLRAAVLQTGADAGLAFDGDGDRVI
                     AVSDDGTLLDGDDLLAVCGIDLHDRGLLTGDTMAVTVMANLGLRRALADHGIAVHETA
                     VGDRYVLEALEANGWVLGGEQSGHVIFRSMATTGDGLLTGIQALVAAGRAGRTLGGRV
                     ADLMVRAPQVLHAVPVSADGVTVVASMADEVTEAAAQLGSAGRVLVRPSGTEPVVRVM
                     VEAFDAAEAAAVADRLVESVRRADRY"
     gene            complement(2591..2983)
                     /gene="rpsI"
                     /locus_tag="QGG16_02925"
     CDS             complement(2591..2983)
                     /gene="rpsI"
                     /locus_tag="QGG16_02925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HJP24261.1"
                     /translation="MPSPLIQSTGRRKESVARVRLRPGNGTVTVNGRTAEDYFPSESH
                     RLVFTEPLRVTATEGAYDIDATLHGGGIAGQAGAMRLGIARALEALEPERRPALKEAG
                     LLTRDDRKKESKKYGLHKARKAPQYSKR"
     gene            complement(3010..3462)
                     /gene="rplM"
                     /locus_tag="QGG16_02930"
     CDS             complement(3010..3462)
                     /gene="rplM"
                     /locus_tag="QGG16_02930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HJP24262.1"
                     /translation="MSTYTPRASEIERVWHVVDAEGMILGRMASEVASILRGKHKPTF
                     TPHIDTGDHVVIINAEKVVLTGAKNTDKNVYDHSGYPGGLRTRAYGTFLAEKPEEAVR
                     RTIRGMIPKNRLGRQQLTKLKVYRGADHPHEAQQPQPLAIDHARARTA"
     gene            complement(3703..4476)
                     /gene="truA"
                     /locus_tag="QGG16_02935"
     CDS             complement(3703..4476)
                     /gene="truA"
                     /locus_tag="QGG16_02935"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HJP24263.1"
                     /translation="MRARATVAYDGAPFHGFAANAGVPTVAGLLVDVLSRVLRTEVTL
                     TCAGRTDRGVHAVGQVVGFDLSERSDAELETLRDIVNRRIGPSVVLTSIQRAADDFDA
                     RFSATGRTYRYRILDRLEPDPLLVTRVWHVAEPLDVAAMEAASADLVGLHDFTSFCLQ
                     QAPRPDGSMPTMMRRVTAASWRRLPDGPSGADLLEFEVSASAFCQRMVRTIVGTLVDI
                     GRGELAVDVIPAVLAAEDRRTAADSAPAQGFVFWSVTYG"
     gene            complement(4567..4920)
                     /gene="rplQ"
                     /locus_tag="QGG16_02940"
     CDS             complement(4567..4920)
                     /gene="rplQ"
                     /locus_tag="QGG16_02940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012229033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HJP24264.1"
                     /translation="MPATPKKGRRFGGSSAHQKSMMANLVASLIAAEGITTTEAKAKA
                     LRPIAEKMITKARKGGVHNHRQVVSFLRDREMAAKLFDEIGPRYVDRPGGYTRILKVG
                     PRHGDNAPMARIELV"
     gene            complement(4925..>5183)
                     /locus_tag="QGG16_02945"
     CDS             complement(4925..>5183)
                     /locus_tag="QGG16_02945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha
                     C-terminal domain-containing protein"
                     /protein_id="HJP24265.1"
                     /translation="EARGLELGEPEEVGGGSPDLDLLIEDLDLSERPRNCLKRAQVDT
                     VGQLLEKTEDDLLAVTNFGQKSLDEVIEKLDERGLTLRVRD"
BASE COUNT          887 a         1779 c         1707 g          810 t
ORIGIN      
        1 tatcaccttg gcgtcggtgg ttatctccgg agccacgctg agaccctcgg acaccatcaa
       61 gtcggcgtgg ttgtcgacat caccgttgag caccgcggtg accagcggga ctgccacccc
      121 atcggcccga acagaatcca ccgggtgggc gttggactcg gagatcaggc ccacgctggc
      181 ccaccgggtg tggcccagga tcgacccctc caccccgggg gcgaccagag cccgggccag
      241 aaggccgtcg gcagccaacg acgcacgtag gaccgccgtg ttgtcgccca gctcgcctat
      301 ctcggctgcc gccttgacca cgaaggccag accaccgccg tccagcaccc ggacactgcc
      361 cgtgcggtgg agaccgtcga ccgttcggcc ggccacctcc gggtcgtcag cagccagatc
      421 gtgattccag accgtcacct ggataccggc tgaatcccgg cccctgacct cgaggcggtc
      481 gatggccgac agggcctgtt ggatcgagag gaggacaccc agcccggcgt cgctcggtgc
      541 gatgcgaggc gaacggagtg atcccactcc gacgtgggta ccgagcctgt cccgggtcac
      601 gccccagacg gcatcccgca gtgctaccag ggcggcattg gccacttcga ctccgtcgga
      661 tgaatccgat ccgtctggag tggtcacccg acgctccagc accgcttcca tcccagcgat
      721 ctgatccgga agatcagcca gtgccgcggt gatccgcccg gccagaccag catcccgatc
      781 gagggccagg agcccgggga ggcctcccag cagacgatcg gcctcggcga tctgaccagc
      841 ggccgtggtc acccggtcag ccatctgcgg gccgtcaggc ccaccgagca gcgcggtggc
      901 gtcgacgagc agcgtcagga tcgactcggc ggtgggaacg tcccgggagg gcggccttcg
      961 gaggatcgcg attatgccgc acatgtgttg atcaccctcc tgttgctcga tgcctgtcgt
     1021 tgtttggtcg tcgccggccg ttcgttgtcg gcacaagatc gcaggccggc ccggtttaca
     1081 ggcactctag gaatcgtacg gggttagtac cggtcggccc ggcggacgct ctcgacaaga
     1141 cgatcggcca ccgctgcggc ctcggccgcg tcaaaagcct cgaccatgac ccgaaccacc
     1201 ggttcggtcc ccgaagggcg cactagcacg cggcccgccg agcccaactg ggcggcggcc
     1261 tcggtcacct cgtcagccat cgatgccacc accgtgacac catcggctga caccggaaca
     1321 gcgtgcagca cctggggggc gcgcaccatc aggtcagcca cccggccacc gagagttcgg
     1381 ccggcacggc ccgccgccac cagggcctgg atgcccgtca ataggccatc gccggtggtg
     1441 gccatggacc ggaagatcac gtggccggac tgctcaccac ctaggaccca gccattggcc
     1501 tccaaggcct cgaggacgta gcggtcgccg acggccgtct cgtgcacggc gatgccgtgg
     1561 tcggccaacg ctcggcgcag gcccaggttg gccatgacgg tgacggccat ggtgtcgccg
     1621 gtcagcagcc cacgatcgtg gaggtcgata ccgcacacag ccagtaggtc atcaccgtcg
     1681 agcagggtcc cgtcgtcgct cacggcaatc acacggtcgc cgtcgccatc gaaggcgagg
     1741 ccggcgtcag cccccgtctg gagcacggcg gcccgaaggt cgtccggatg cgtcgagcca
     1801 cacccttcgt tgatgttgcg gccatcaggc gaggcgtgta tcacgcccac ctcggcaccc
     1861 agtcgacgca ggatgtcggc cgcgaacgct gaggtggcac cgttggcgca gtccacgact
     1921 agggatcgtc cggccagggg tcgctcgtca acctgctgcc tggcgacctc ccgcccatcg
     1981 agagacccct catagatcgc ccatctgatc aaggcttcga cccaacgacg accagcggcg
     2041 gtctcctcgg aggggtcgtc ccagtcgggc gccaccctcg gaccatcgag ccgggggcag
     2101 gcgtcccacg cctcctggat cgccgactgc acccggtcat cgagctttcg gcccccagcg
     2161 gcgaacaact tgatcccgtt gtcgaaccac gggttgtgcg acgccgagac caccgcgcca
     2221 gccaccccgt cgatctggca ctcgtgtgcg acagtaggtg tggggacaac cccgagggag
     2281 gtgacgtcga gaccaccgtc caccaggcct tcggccagtg caagggcaag agcaggaccc
     2341 gactcacggg tgtcgcggcc gatgaccaca caatccgctc ccagatgggc cgccgcggca
     2401 cgccccaggg cccgtaccgc cggctcatcg agaacggaac cggcccgggc gcggacgccg
     2461 tcagtaccga atcgcagcac ctgtcctgaa gctgccggtc ctgaggaagg cggatgcact
     2521 gagcgtccgg tcatgtcggc agcgtaggag ccagccgggg accagtcccc gacccccccc
     2581 acgccgtcga tcagcgcttg gagtactgcg gagccttgcg ggccttgtgg agtccgtact
     2641 tcttggactc cttcttgcga tcgtcgcggg tcagcaggcc agcctccttg agggccggac
     2701 gacgctcggg ctctagggcc tctagtgcac gggcgatgcc gaggcgcatg gcccccgctt
     2761 gaccagcgat gccgccgccg tgcagggtgg cgtcgatgtc gtaggcgccc tccgtggcgg
     2821 tgaccctcag cggctcggtg aacaccagac ggtggctctc cgacgggaag tagtcctcgg
     2881 ccgtacgacc gttgacggtg accgtgccgt tgcccgggcg caggcgcaca cgagcgaccg
     2941 actccttgcg gcgaccagtg gattggatga gggggctggg catcaggtgc tcctgtcagg
     3001 gccggccgct caggccgtgc gggcccgtgc gtgatcgatg gccagcggct ggggctgctg
     3061 tgcctcgtgg ggatgatcgg cgccgcggta caccttcagc ttggtgagct gctggcggcc
     3121 caggcggttc ttgggaatca tcccccggat ggtccggcgg acagcctctt cgggcttctc
     3181 ggccaggaag gtgccgtagg cccgggtacg cagaccgccc gggtaacccg agtggtcgta
     3241 aacgttcttg tcggtgttct tggcgcccgt cagcacgact ttttcggcgt tgatgatcac
     3301 cacgtggtca ccggtgtcga tgtggggcgt gaaggtcggc ttgtgcttgc cgcgtaggat
     3361 cgacgcgacc tcggacgcca tacgaccgag gatcatgccc tcggcgtcga cgacgtgcca
     3421 gacgcgctcg atttcgctgg ccctgggggt gtaggtggac acggttgacc gcctgtactt
     3481 gatcggagac tggttgggaa ggctgctgga agcctcaagg aggattccta gaggacgcgg
     3541 cacgaccggg ggtcaaggct agggccggcc caggaccccg gcaacccgtc gacctgggat
     3601 gggacgcgtg ccacagcggg cccaaaaccg ggattcggaa accactatca gcgccacggc
     3661 tcattcctgg ccgtttaacc gatccggtgc ccgcagaaaa cgtcagccgt aggtaaccga
     3721 ccagaagaca aagccctgcg ccggagcgga atccgccgca gtacgtcgat cctcggcagc
     3781 cagcacggcg gggattacgt caacggccag ctcaccgcgg ccgatatcca ccaatgttcc
     3841 aacaatggtt cggaccatcc gctggcagaa ggccgacgcg gacacctcga actccaacag
     3901 gtccgctccc gacggaccat cgggcaacct ccgccacgag gctgcggtca ccctccgcat
     3961 catggtgggc atcgacccgt ccggtcgagg agcctgctga aggcagaacg acgtgaagtc
     4021 gtgcaggccc accaggtcgg ccgatgcagc ctccatggcg gccacgtcga gaggctcggc
     4081 cacgtgccaa acccgggtga ccagcagcgg atcgggttcc aggcgatcca ggatccggta
     4141 ccggtaggtc cgaccggtag ccgagaaccg ggcgtcgaaa tcatcggcgg cccgctgaat
     4201 ggaggtcagg accacggagg gtccgatccg ccggttcacg atgtcgcgca gcgtctcgag
     4261 ctcggcgtcc gaacgctccg acagatcgaa acccactacc tggcccacgg cgtgcacgcc
     4321 gcggtccgtg cggccagcac acgtcagggt cacctcggtc cgtaggacgc gtgacaacac
     4381 gtcgaccagc aagccggcga cggtgggtac gcctgcattg gcggcgaacc cgtggaatgg
     4441 ggccccgtca taggcgacgg tcgccctagc cctcattaca ggaccctcat tacaggaccc
     4501 tcattaactg gtcctcccac cccggtccga acatgctgga gcgggatgtg ccctaaaggg
     4561 gctgggtcag acgagctcga tgcgagccat cggcgcgttg tcaccatggc gggggccgac
     4621 cttgaggatc cgcgtgtaac cacccggacg gtcgacgtag cggggaccaa tctcgtcgaa
     4681 gagcttggcg gccatctcac gatctcggag gaacgagacc acctgacggt ggttgtggac
     4741 accgccctta cgggccttgg tgatcatctt ctcggcgatg gggcgcagag ccttggcctt
     4801 ggcctccgta gtcgtgatgc cctcagcggc aatcagcgac gccacgaggt tggccatcat
     4861 cgacttctgg tgagccgagc tgccaccgaa gcgacggccc ttcttggggg ttgccggcat
     4921 gacgtcagtc ccggacccgc agcgtcaggc cgcgctcgtc aagcttttcg attacctcgt
     4981 cgagcgactt ctggccgaag ttggtgacgg ccagcaggtc gtcctccgtc ttctcgagca
     5041 actggcccac agtgtcgacc tgggcgcgct tgaggcagtt acggggacgc tccgacaggt
     5101 cgagatcctc gatcagcagg tcgaggtccg gtgaaccacc gcccacctcc tcgggctcac
     5161 ccaactcgag accacgggcc tcg
//
LOCUS       DASCMR010000121         3203 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000587483, whole genome shotgun sequence.
ACCESSION   DASCMR010000121 DASCMR010000000
VERSION     DASCMR010000121.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3203)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3203)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3203
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000587483"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..416
                     /locus_tag="QGG16_02950"
     CDS             <1..416
                     /locus_tag="QGG16_02950"
                     /inference="COORDINATES: protein motif:HMM:NF012488.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HJP24266.1"
                     /translation="LQYGTPSWEALAGIEAAADFLLDVGLDVIAASEAERFARLIGGL
                     HAIDGVRVVGPQDVADRAPTLMFEVAGQTPVAVSERLATDRVAVWDGHNYAVEAMGPL
                     GLDVEAGAVRAGISIYTTDDDVDRLLAAVIDLAAT"
     gene            484..1326
                     /locus_tag="QGG16_02955"
     CDS             484..1326
                     /locus_tag="QGG16_02955"
                     /inference="COORDINATES: protein motif:HMM:NF024950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJP24267.1"
                     /translation="MPPIEDWHRLLDGRVAVVTGGGAGIGGAISRLFAQHGALVEIVE
                     INPDRAALVVEDIEAVGGVARAHVVDVRCDAEVEDLRGEVLGEHGRIDVLVNNVGDHR
                     PLVRFHESDPESWSAMYAVNLEHLFRVTRAFLAPMIDGGGGSIVNVHSVEGMRGFPGE
                     PVYAAMKAAAAHFTTSLATGYGHRGIRVNGIGPDLTQTPQVDYLAPDGPSGAGDHLWE
                     SWAPVGRLGWPVDQARVALFLASDLSAFVTGHNVPVDGGTLAGGGWFFSPEARRFVNR
                     PTGL"
     gene            1323..2597
                     /locus_tag="QGG16_02960"
     CDS             1323..2597
                     /locus_tag="QGG16_02960"
                     /inference="COORDINATES: protein motif:HMM:NF014564.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HJP24268.1"
                     /translation="MSIGRVEVRDEMAEGGEEEPSIVRPLHGVRILAVEQMAALPFAT
                     QLMARLGAEVVKVEHPSTGDSARGSLPAVHDPEGRPVGATFLRNNLNKRSVAIDLKQP
                     EGVDLVLRMSRNFDVFGENFRAGTADRLGIGYQAVRAVHPATVYLSVSGFGQDPASPY
                     RDMGAYASIVEGMSGIYEFKRAPGRAPTANPVGALGDISSALFGAVGVLAALRQRDRT
                     GLGQHVDVAMLDATVAMTDIVANFFSMGVEREWGSGVGIVDTFAASDGHFVLQCVREH
                     HFAVLCAEIGRPELADDERLATRAGWQDHMDGILRPAIEAWSTGRTTVEAVTALSGAG
                     MACGPSLTPSQVVADPHLAVRNMLIETLPGDAEAPVLVPGNPVKLSEVPEADDTRVPW
                     LGEHTDDVLGSELGLDDTELDDLRARGVIGAV"
     gene            2677..>3203
                     /gene="selD"
                     /locus_tag="QGG16_02965"
     CDS             2677..>3203
                     /gene="selD"
                     /locus_tag="QGG16_02965"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004756 - selenide, water dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0001887 - selenium compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_except=(pos:2722..2724,aa:Sec)
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HJP24269.1"
                     /translation="MVENRRLTQFSHGAGUGCKLAPGELAHVVRRLAPVNHPDLLVGS
                     ATGDDAAVWRLDDQRALVVTTDFITPVVDDARMWGRVAAANAVSDVYAMGRRPLLALN
                     LVGWNSEELSTDLLGDVLLGAQDVADAGGFVIAGSHTVDDPEPKFGLAVVGEADPNRL
                     LTNAGFRPGDVLVLT"
BASE COUNT          499 a          994 c         1136 g          574 t
ORIGIN      
        1 gtctccagta cggcacgccc tcatgggagg cgctggctgg catcgaggcc gcagcggact
       61 ttcttctgga cgtcggtctc gacgtcatcg ctgcgtccga ggcggaacgg ttcgctcgtc
      121 tgatcggtgg cctgcacgcc atcgacggcg tccgggtggt cggaccacag gatgtggcgg
      181 accgggcacc cacgctcatg ttcgaggtgg ccggccagac gccggtagcg gtttctgaac
      241 ggctggcgac agaccgtgtc gccgtctggg acggccacaa ctacgccgtg gaggcgatgg
      301 ggccgcttgg actggacgtc gaggcgggcg ccgtgcgggc cggcatcagc atctacacca
      361 ccgatgacga cgtggaccgc ctgctggctg cagtgatcga cctcgccgcg acatgacccc
      421 tgacaccgag gcatcgtgac ggacggcagg gagtcggcta cctccagcca ggatccgtcg
      481 agggtgccgc ccatcgagga ctggcaccgt ttactggatg gtcgggtcgc tgtcgtcacc
      541 ggaggtggag caggcatcgg tggtgccatc tcgaggctgt tcgcccagca tggagccctc
      601 gtcgagatcg tcgagatcaa ccccgaccgg gcggctctgg tcgtcgagga cattgaggct
      661 gtcgggggag tggcccgggc ccacgtggtt gacgtccggt gcgacgctga ggtagaggac
      721 ctccgtggcg aggtgctcgg cgaacacggg cggatcgacg tgctggtcaa caacgtaggc
      781 gaccatcggc cgctggtccg gttccacgag tccgatccgg agtcctggtc ggccatgtac
      841 gccgtgaacc ttgagcactt gtttcgggtc acccgggcat tccttgcgcc catgattgat
      901 ggtggtggcg ggtcgatcgt gaacgtgcac tccgtggagg gcatgcgggg attccccggc
      961 gagcccgtct acgcagccat gaaggccgcg gcggcccatt tcacgacctc gctggctacc
     1021 gggtacggcc accgagggat ccgggtgaac ggcatcggcc ctgacctcac ccagacaccc
     1081 caggtcgact acctggcccc cgacggaccg tcgggggcgg gcgaccacct atgggagtcg
     1141 tgggcaccgg ttgggcgcct gggatggccc gtggaccagg ctcgggttgc cctctttctg
     1201 gccagcgacc tgtcggcgtt cgtgaccgga cacaacgtgc ccgtggatgg cgggaccctg
     1261 gccggtggcg gttggttctt ctcgcctgag gcccgccgct tcgttaatcg accgactggc
     1321 ctgtgagcat cgggagagtg gaagtacgag acgagatggc ggaagggggt gaggaggagc
     1381 cgtccattgt tcgcccattg cacggcgtcc ggatcctggc ggtggagcag atggctgctc
     1441 tgccgttcgc cacacagctg atggcccgcc taggtgccga ggtggtcaag gttgagcacc
     1501 cgtcgactgg ggatagcgcc cgtggttcgc tcccggccgt acacgatccc gagggtcgcc
     1561 cggtgggcgc caccttcctt cgcaacaacc tcaacaagcg gagcgtggcc attgacctaa
     1621 agcaacccga gggcgtcgat ctggtgttac ggatgtcccg caacttcgat gtgttcggtg
     1681 agaacttccg ggccggaacg gccgaccgac taggcatcgg ctatcaggcc gtacgggcag
     1741 tgcaccctgc gacggtgtac ctatcagtgt cggggttcgg acaggaccct gcgtcgccgt
     1801 atcgagacat gggcgcctac gcttcgatcg tcgaggggat gtcggggatc tacgagttca
     1861 agcgtgcgcc gggacgggcc ccgaccgcca accccgttgg ggcgttgggt gacatcagct
     1921 cagcgttgtt cggcgcggtc ggcgtgcttg ccgcgttgcg ccagcgggac cgcaccggtc
     1981 tcggccagca cgtggatgtg gccatgctgg atgcgacggt ggccatgacc gacatcgtgg
     2041 ccaacttctt ctcaatgggt gtcgagcgcg agtggggaag cggcgttggc atcgtcgaca
     2101 cgtttgcggc gtccgatggc cacttcgtcc tgcagtgcgt gcgtgaacac cacttcgccg
     2161 tactgtgtgc tgagattggt aggcctgaat tggccgatga cgagcgactg gccacccggg
     2221 ccggttggca ggatcacatg gacggaatcc tgcggccggc catcgaggca tggtcgaccg
     2281 gtcgcaccac cgtcgaggcc gtcactgcgc tctctggtgc cgggatggcg tgcggaccgt
     2341 ccctgactcc gagccaggtg gtagccgatc cgcacctggc ggtccgcaac atgctgatcg
     2401 aaactctccc cggagatgcc gaggcgccgg tcctggtgcc cggcaaccca gtcaagctct
     2461 ccgaggtacc tgaggccgat gacacccggg tcccgtggct gggcgaacac actgacgacg
     2521 tgctgggtag tgagttgggc ctggacgaca ccgaactgga cgaccttcga gcgcggggcg
     2581 tcatcggcgc tgtctgagtg gcgacctact gtggcgagat gccatcggat accggtggcg
     2641 ttagatcacg aaacaggtac gggagggggt gaacccatgg tggagaatcg ccggctgacc
     2701 cagttcagcc atggcgctgg ttgaggctgc aagctcgccc ccggtgagct ggcgcacgtc
     2761 gtgcgccgtt tggcacccgt taaccatcct gacctgctcg ttggtagcgc caccggcgat
     2821 gatgccgcgg tgtggcgtct cgacgaccag cgcgctctgg tggtgaccac cgacttcatc
     2881 accccggtcg tcgatgacgc acggatgtgg ggtcgcgtgg cggcagccaa tgcggtctcc
     2941 gatgtgtatg ccatgggtcg ccgtccgctg ctggcgctca accttgtggg gtggaacagc
     3001 gaggagctgt cgactgacct gttgggtgac gtcctgctcg gagcgcagga cgtggccgac
     3061 gcgggcgggt tcgtgatcgc cgggagccac acggtcgacg acccggagcc caaattcggc
     3121 ctggctgtcg tcggtgaagc cgatcccaac cgactgctca ccaacgctgg cttccggccc
     3181 ggcgacgtcc tggttctgac caa
//
LOCUS       DASCMR010000122         2195 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000591832, whole genome shotgun sequence.
ACCESSION   DASCMR010000122 DASCMR010000000
VERSION     DASCMR010000122.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2195)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2195)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2195
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000591832"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(21..989)
                     /locus_tag="QGG16_02970"
     CDS             complement(21..989)
                     /locus_tag="QGG16_02970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HJP24270.1"
                     /translation="MGISKIWVFGEATEAGATASTLELLTKARTLADSVEVVLAGDGS
                     TVAGQLGAHGATAVHTVDDADGALPGARVASAIAGALEAGNGPDVLLATTSYDGRDVA
                     GRLSAKVDRPVLTNVVDLIANGDRLVGSEPVFGGTTDVLTGFTDTGLAIFLVRPKSFV
                     AEESGGAPAAVSDLAVGELGGTGAAVVKERFVEETSGPKLDEAAVVVSGGRGLGEAEK
                     YEMIETLAKLVKGAPGASRAVVDAGWVPYSYQVGQTGKVVKPTVYVACGISGATQHLV
                     GMKGSANIIAINKDEEAPIFGVADLGIVGDVHKVLPKLIEALQARG"
     gene            complement(999..1778)
                     /locus_tag="QGG16_02975"
     CDS             complement(999..1778)
                     /locus_tag="QGG16_02975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HJP24271.1"
                     /translation="MIVVVCVKQIPDPADPGVLDPETRTLKRDVKLILDESDSYGVEM
                     GLQLVDAAGGGEVRLVSMAPNNEVSGLRTALAMGAESAVLVSDEALAGSDALSTAKVL
                     AAAIARCEPDLILTATESSDGYTGTVPVQIAELMGLPSVTFGKEIEVADGVATVKRQT
                     EAGFDQVECPLPAVVSVTAGVVEPRYPSFKGIMAAKNKPVDELDLAGLGIDPATVGWA
                     GARQEITTITEAPAREAGEVIVDEGDAHERILAFLDDLKVL"
BASE COUNT          381 a          779 c          667 g          368 t
ORIGIN      
        1 ctgggccaga gcccagcggg tcaacctcgg gcctgcaggg cctcgatcag cttgggcagc
       61 accttgtgca catcgcccac gatgccgagg tcggcgacgc cgaagatcgg cgcctcctcg
      121 tccttgttga tggcgatgat gttcgctgag cccttcatgc cgaccaggtg ctgcgtggct
      181 ccggagattc cacacgccac gtagaccgtc ggcttcacga ccttgccggt ctgaccgacc
      241 tggtacgaat acgggaccca cccggcatcc accacggcac gtgatgcacc cggggcaccc
      301 tttaccagct tggccagagt ctcgatcatc tcgtacttct cggcctcgcc cagcccacgg
      361 ccaccggaga ccaccacggc cgcctcgtcc agcttcggac ccgatgtctc ctctacaaag
      421 cgctccttga cgacggcggc accggtgcca ccgagttcgc cgactgcgag gtccgacacc
      481 gcggcgggcg cgccgccgga ctcctcagcg acgaacgact tgggtcgcac caggaatatg
      541 gccagtccgg tgtcggtgaa accggtcagt acgtcggtgg tgccgccgaa cacgggctcg
      601 ctacccacca gacggtcacc gttggcgatc aggtcgacaa cgttggtcag caccgggcgg
      661 tccaccttgg ccgacaggcg gccggccacg tcacggccgt cgtaggaggt ggtggccagt
      721 agcacgtcgg ggccgttccc ggcctccagc gcaccggcga tggccgaggc gacacgtgca
      781 cctggcagcg caccgtcggc atcatccacg gtgtggacag cggtggcgcc gtgcgcaccg
      841 agctggccag ccactgtcga accgtcgccc gccaaaacca cctcgacgga gtcggccagc
      901 gtgcgggcct tggtcagcag ttccaacgtc gatgcggtgg ctccagcctc cgtggcctca
      961 ccgaataccc agatctttga gattcccatg atcgcctcct acagaacttt gaggtcatcc
     1021 aggaacgcca ggatgcgttc gtgggcgtca ccctcgtcga cgatgacctc gccggcctcc
     1081 cgcgcgggag cttcggtgat ggtcgtgatc tcctggcggg cgccagccca gcccacggtg
     1141 gccgggtcaa tgcccaggcc agccaaatcg agctcgtcga ccggcttatt tttggctgcc
     1201 atgatcccct tgaacgaggg gtagcggggc tcaacgacac cggcggtaac cgaaaccacg
     1261 gcgggaagcg ggcactcaac ctgatcgaaa ccggcctcgg tctgacgctt cacagtggcc
     1321 acaccgtcgg cgacctcaat ctccttgcca aaggtgaccg acggaaggcc catcaactcg
     1381 gcgatctgca cgggcacggt gcctgtgtag ccgtcgctgg actcggtggc cgtcaggatc
     1441 aggtcgggct cacagcgggc aatcgccgca gccagcacct tggccgtcga gagcgcatcg
     1501 gaacccgcta gggcctcgtc gctgaccagc acggcgctct cggcgcccat agccagggcg
     1561 gtccgcagac cgcttacctc attgttgggg gccatggaga cgagcctcac ctcgccgccg
     1621 cccgcggcgt ccaccaactg caggcccatc tcgacgccat aggagtccga ctcatccagg
     1681 atgagtttga cgtctcgctt cagggttctg gtttcaggat ccagcacacc tgggtctgcc
     1741 ggatcgggga tctgcttgac acatacgacg acgatcatgg gcccgagtct gccttacgac
     1801 gaaggaaacg ggaccaaccg cggctgggga tttcgcaacg gtcgtcggtc accagcggac
     1861 ccacctccga gcgggtctcg gaggcgccgt agggtcatca ccgtgagcga caacgaacca
     1921 tcagcatcca gccctcccca accgctctcc aaccaacgga ggcatggttt ccgccacgcc
     1981 tcgaccgttg acctggcagc ccctctctcg agcctcatcg atctcgtttt cctgcccctc
     2041 atgggcgcca acgccgcgac ggtctcgtga tgcggtaccc catcacccat cttctcgaga
     2101 catgccgctt cccgacgagc ggagtcaggt gccgaccatg aagttgctgc tgatcgtcaa
     2161 cccgtcggcg tcgtcggtca cggctcggac ccgga
//
LOCUS       DASCMR010000123         1667 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000592385, whole genome shotgun sequence.
ACCESSION   DASCMR010000123 DASCMR010000000
VERSION     DASCMR010000123.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1667)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1667)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1667
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000592385"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..308)
                     /locus_tag="QGG16_02980"
     CDS             complement(<1..308)
                     /locus_tag="QGG16_02980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24272.1"
                     /translation="MTLAKRGLLRAMVAVGMVATITAAVGIPARTTYGAQVSVDEPQY
                     LMTAISLGEDFDLDVSDEIDEERYLPFHQIGLNTQTIDLNDQGQRISPHDPLLPAMLA
                     L"
     gene            complement(317..>1667)
                     /locus_tag="QGG16_02985"
     CDS             complement(317..>1667)
                     /locus_tag="QGG16_02985"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006826 - iron ion transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HJP24273.1"
                     /translation="RRMWRVLLPLPLAYPTFVGAAAFLRTLNPGGLANDLLQAVGINH
                     TFELRGLFGAWLVLTLFTYPYVYLPVAARLRSLPGSLEESARLLGDSGFSTFRRVVLP
                     QTASAITSGALLVGLYTISDFGAVQLMRYDTLTRAIWTTRLADQPTSFALSAILLVLA
                     VVVVGGERLGSRRLSERPPARASTSRLFTTPLDRWRLPGLALVVGTIGLALVAPAAAL
                     ADWGISGLVRDATGGRSLAINASDIVGPAWNTVWVSVVAACVAVVAVLPTAVLLARYH
                     SRVGPITGNVIISTFAMPGLLIALAMFFWTLRSSWAAEHLRGTLIVLVFAYMVRFGAQ
                     ALGAAQIAVAAVPDRLHDSARVLGAGSFRRLATVDAPLVTPGLVAGGGLVLLSTMKEL
                     PITLLVAPFDFPTLTTKIFQSFEDAFVAEAGLLAMVLVILSGALTWFLVVRRADHLD"
BASE COUNT          373 a          473 c          563 g          258 t
ORIGIN      
        1 agggccaaca tcgctggcag gagggggtca tgggggctga tccgttgacc ctgatcgttg
       61 aggtcgatgg tctgagtgtt aaggccaatc tgatggaagg gtaggtatcg ctcttcgtcg
      121 atctcgtcgg acacatccag atcgaagtct tcgcccaagc tgatggcggt catcaggtac
      181 tggggttcgt ccacactgac ctgagctcca taggtggtcc gcgccgggat gcctacggcg
      241 gcggtaatgg tggccaccat gcctacggcc accattgccc ggaggagacc tcttttcgcc
      301 aaggtcatga cccgtgtcag tcgaggtgat cagcccggcg gaccaccaag aaccaggtga
      361 gagcaccaga cagaatcact aagaccattg ccagcaggcc agcctcggcc acgaaggcgt
      421 cttcgaacga ctggaagatc ttggtggtca gtgtggggaa gtcaaacggt gccaccagaa
      481 gggtgattgg caactccttc atggtcgata gcagcactag gccaccgccg gcgactagcc
      541 cgggggtcac aagcggagcg tccactgtgg ccagacggcg gaaagaccca gcgccaagca
      601 cccttgctga atcgtgcaga cggtcaggca cggcggctac tgctatttga gcagcgccga
      661 gggcttgggc cccgaagcgg accatgtagg cgaacaccag cacgatcagg gtgccgcgga
      721 ggtgctcggc tgcccaactg ctacgaaggg tccagaagaa catggccaga gcgatgagca
      781 gaccgggcat agcaaaggtc gagatgatca cgttgccggt gatcgggcca acccgagagt
      841 ggtaacgagc cagcagtacc gcagtgggca ggacggcaac aacggccacg cacgcggcca
      901 ccacgcttac ccaaacagtg ttccaggccg ggccgacgat atctgaggcg ttgatagcca
      961 gagaacggcc gccggttgcg tctcgcacca gacctgagat tccccagtcg gccagagctg
     1021 cagccggagc aaccaaagcg agaccgatcg tgccgacgac cagagccagc ccaggcagcc
     1081 gccaacgatc tagtggcgtg gtaaagagtc ggctggtgga ggcgcgcgcc ggtggtcgct
     1141 cactgagccg gcggctaccg aggcgctcac cgccgaccac gaccacggca agaacaagca
     1201 ggatggccga aagggcgaac gatgtgggct ggtctgccag acgggtcgtc cagatcgcac
     1261 gggtcaaggt gtcgtagcgc atgagctgga cggctccgaa gtcactgatg gtgtaaaggc
     1321 cgaccagtag tgcccctgaa gtgatggcgg acgcagtctg aggaagaacg actcgacgga
     1381 aggtgctgaa cccggagtcg ccaagaagtc gggcactttc ttctagcgat cccggaaggc
     1441 tgcgaagtcg tgcggcaact gggaggtaga cgtatgggta cgtgaacagg gtgagaacta
     1501 gccaggcgcc gaacagcccg cgtagttcga acgtatggtt gataccaact gcttgcagga
     1561 ggtcgttggc cagtccgcct ggattgaggg tgcggagaaa tgccgccgcc ccgacgaatg
     1621 tcggataggc cagcggcagg ggtagtagca cccgccacat gcggcga
//
LOCUS       DASCMR010000124         1773 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000592527, whole genome shotgun sequence.
ACCESSION   DASCMR010000124 DASCMR010000000
VERSION     DASCMR010000124.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1773)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1773)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1773
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000592527"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            451..>1773
                     /locus_tag="QGG16_02990"
     CDS             451..>1773
                     /locus_tag="QGG16_02990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24274.1"
                     /translation="MSPETLSPDLLPDGVVTDGAYVDPRGPIFLAFQESLDRTSRFSG
                     LDSFCRMGSADPIDAPTAVEAGITAESIVIAQIDTRLNELVKVGFGVPVGDPGAMVAA
                     FLDVVNEACGGIHGRSLELRTIGVSALGGGDLDIDTLREAACLEAVEIHEAVVVLAAT
                     PIPGTAASCLTRRHRVSHLAVRGISDLDLLQGQGLLHSIEVGDRTGLSLALGAAIDRG
                     LLVGATIGVVVPDSPQRSDDLMAAVDHALAEVDMTSNRYQIGCEGATTCQVGLDTAVA
                     AMIADGVDVVIPLVDMTSLPWLILEMLEQQMPRPQFVLSGLDGQGLDAVASRIAEFGG
                     PTAGAYYDGALVVDGSATGAQRLDDAERRPFDRLCVEAWAEVEGVAVPTVESAADDVH
                     RTVVEACSLVRWVARAVEAAGPDPSRLALQVALAGVGPIDVPDMRPTTV"
BASE COUNT          295 a          607 c          551 g          320 t
ORIGIN      
        1 gcgaccaaca gcccgccccc cgggcaccga tcaaggcatc ctgggtggac accccggcaa
       61 tacccccagc gatggccatg caaaggtccg acggtgttgg gtttcacccg aatactgtcc
      121 agcggtgccc tccgggcacc caccctgcct atgcgccacc gtctccccac caccctcgcg
      181 ctcgccgccg ccctcgtggc gaccctcccc gcctgcacga ccaatgaccc cacgaccgag
      241 ccggcgacga cctcgccgac tgccgtcatc acggtcactc catcaaccac gtccgctccc
      301 gcctcgacga cgagcgctcc agggtccgag accacccctc ccaccagcac gacattgatt
      361 gcacccgtcg agtcgacgac ttcggtagcc acgtcctcga ccgttacgga gcgggttgaa
      421 gacagggatc ccgagagcgg cgacaatgag ttgtctccag agacactctc gccagatctc
      481 ctacccgacg gggtggttac cgatggtgca tacgtcgacc cccgcggacc gatctttctc
      541 gcctttcagg agtctctcga ccggaccagt cggttctccg gactggactc cttctgtcgg
      601 atgggctccg ctgatccgat agacgctcct actgctgtgg aggcgggaat cactgccgaa
      661 tcgatcgtca tcgcccagat cgacacccgc ctcaacgagt tagtcaaggt gggcttcggc
      721 gtgccggtgg gcgatcccgg cgccatggtg gctgcgttcc tggatgtcgt gaacgaggca
      781 tgcggcggaa tccacggtcg atcactcgag cttcgaacca ttggcgtgtc ggcgctgggg
      841 ggtggcgatc tcgacatcga caccctgcgt gaggctgcct gtctggaagc tgtcgagatt
      901 cacgaagcag tcgtggtcct ggccgccacc cccatacctg gaaccgccgc aagctgtctc
      961 actcgccgcc accgggtctc ccatctcgcc gtacgcggca tctccgacct ggacttgctc
     1021 caagggcagg gtctgctcca ctccatcgag gtcggtgacc gaactggtct gagcctcgcc
     1081 ctgggggctg ccatagaccg cggactccta gttggtgcga ccattggggt ggtcgtacca
     1141 gattcacctc aacggtctga cgacctcatg gccgcggtcg atcatgcact ggccgaggtc
     1201 gacatgactt ccaaccggta tcagatcgga tgcgaagggg ccaccacatg ccaggtgggc
     1261 ctagacactg cagtcgccgc catgattgct gacggcgtgg acgtggtcat cccgctagtc
     1321 gacatgacgt cactgccgtg gctgatcctg gagatgctgg aacagcaaat gccccgccca
     1381 cagtttgtcc tgtcgggtct ggacggacag ggcctggatg cggtggcatc acggatcgcc
     1441 gagttcggcg gaccgaccgc tggcgcctac tacgacggcg ccctggtggt cgacgggtcg
     1501 gcgaccggtg cacagcgact tgatgatgct gaacggcgac cgttcgatcg tctctgcgtc
     1561 gaggcttggg cggaggtcga gggcgtagcg gtgcctaccg tcgaaagtgc cgcggatgac
     1621 gtccaccgga cggtggtgga ggcatgcagc ctcgtgcgtt gggtggctcg ggctgtcgaa
     1681 gcggccgggc ccgatccgtc ccggctagct ctgcaggtcg cgctggccgg cgtgggaccg
     1741 atcgacgtgc ctgatatgcg tcccaccacg gtc
//
LOCUS       DASCMR010000125        10279 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000594962, whole genome shotgun sequence.
ACCESSION   DASCMR010000125 DASCMR010000000
VERSION     DASCMR010000125.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 10279)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10279)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10279
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000594962"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..214
                     /locus_tag="QGG16_02995"
     CDS             <1..214
                     /locus_tag="QGG16_02995"
                     /inference="COORDINATES: protein motif:HMM:NF012760.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016742 - hydroxymethyl-, formyl- and
                     related transferase activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="formyltransferase family protein"
                     /protein_id="HJP24275.1"
                     /translation="EVDAGPILAQQEVPVCPDDDEVSLHERIEVVERRLYVDTLRAVL
                     DGDISLESVQSRSASASEPATKGATS"
     gene            211..1797
                     /gene="purH"
                     /locus_tag="QGG16_03000"
     CDS             211..1797
                     /gene="purH"
                     /locus_tag="QGG16_03000"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HJP24276.1"
                     /translation="MSPATKPSPRRALLSVYDKVGIVDLARGLVDLGWELVSSGGTAS
                     LLAGEGIPVIEVAEITGVTEMLGGRVKTLHPMVHGGILADRSDPSHVRDLRERGITPI
                     DLVVGNLYSFSSDPHIELIDIGGPTMVRAAAKNHAHVGVVVDPADYDGLLAELRADGS
                     LSDATRHQLAREAFAHTAAYDAAIVQWFDGPDSGRPDADGSGASDPDPLKPSMHLALE
                     RVQDLRYGENPHQVGARYRTVGSSGWWDTAVVHGGKAMSYLNLLDTEAAWRLVHALGD
                     PGVTAGADEPTAVVIKHANPCGAAVGVDIAEAYVAAHECDPVSAFGGIVAVNRPVTLA
                     MAESLSTVFTEVVVAPDYESDALAHLQQKANLRILEAEPPTWPELDVRVIDGGLLVQT
                     ADRLVAEPSQWQVVTEREPTVGEWADLVFAWRVAARVNSNSIVLAKGLRAVGIGAGQQ
                     NRRDAGRIAADKAAGRAAGGACASDAFFPFRDGLDAAAEAGASAVVQPGGSIRDDEVI
                     AAANEQGMAMVFTGERHFRH"
     gene            1845..2696
                     /locus_tag="QGG16_03005"
     CDS             1845..2696
                     /locus_tag="QGG16_03005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004488 - methylenetetrahydrofolate
                     dehydrogenase (NADP+) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetrahydrofolate dehydrogenase/cyclohydrolase
                     catalytic domain-containing protein"
                     /protein_id="HJP24277.1"
                     /translation="MSAQLLEGGPVAKAVLDDVRIRVDALKAAGITPGLGTILVGDDG
                     ASAGYVRKKHETCELVGIASHHIQVVAGDPPAALDEAVANFNEDPTVHGYIIQHPVAD
                     GFDFNAALLAMDPAKDADGLHPTNLGRLVLQEDGPVPCTPAGIQALFVHYDIEISGKH
                     VVVIGRGPTLGRPLSLLLTTKAPGANAAVTVVHSAVPDLADLTREADIVVAALGVPSF
                     VQPEMVKPGAVVVSGGISWEGKKLLADVDESVGEVASWITPRLGGVGPTTVAMLLRNT
                     VEAAERA"
     gene            2808..4004
                     /gene="icd"
                     /locus_tag="QGG16_03010"
     CDS             2808..4004
                     /gene="icd"
                     /locus_tag="QGG16_03010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015799269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HJP24278.1"
                     /translation="MADKITMGVDGALQVPTDPIIPFIEGDGTGIDIWPAARLVLDAA
                     AAKHGHTVEWKEVLAGEKAYNETGDWLPQETVDIFSEYLIGIKGPLTTPIGGGFRSLN
                     VALRQILDLYVCLRPVRWFRGVPSPVKHPELVDMVIFRENTEDIYAGLEVEAMTPDAL
                     KLRELLEDAFGWRIREDSGIGIKPISKTGSQRLQRAALQYAVDRGLPRVHWVHKGNIM
                     KFTEGAFQKWGYELVREEFSDVAVGWDDCDGDPGDRVLVQDSIADIALQQVLTRPAEF
                     DVIATMNLNGDYLSDALAAQVGGIGIAPGGNANYVTGHGIFEATHGTAPKYAGQDKVN
                     PSSVLLSGVLMFEHIGWQDAADDIVRAVESAVTDKVVTYDFARLMDGATEVKCSEFAS
                     AVVDRL"
     gene            4025..5884
                     /locus_tag="QGG16_03015"
     CDS             4025..5884
                     /locus_tag="QGG16_03015"
                     /inference="COORDINATES: protein motif:HMM:NF012869.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJP24279.1"
                     /translation="MPESVVRRGGRLIWRSLRLHPWSHAAAIMGANVFALAVVGFTVV
                     IGRITDEVIVPGLDDDGVSRRSLLVAVAVVVAVGVVRALSIMVRRWFNMLATVSTQRT
                     WREAVTDRFLDVPLAFHRARPAGQLLAHADADVEVATSMLKPLAFSLSVIVLAVASLV
                     SLLVVHPWFALVAVVMFPTLTLLNRRFTRKVEAPAAAGQEAVGVLSGIAHESLDGVLI
                     VKTLGREAAEVDRFSDAANDLRNHRLAVGRLRSRYAPLYYSLPQIGIIVLLLVGVWLV
                     DSGSVTIGEVVRAMSLFSILTLPMEILGFLFQEMPRSVVAMDRIDGVLAEAIEPRPEA
                     STGSARHDAGPVVVEFEAVAFTHPDGLEVLRDLDLRLEPGESVALVGATGSGKSTVVA
                     LLAGLVPPSSGEVRIGAKATTTLGPEGVAVSVATVLQETFLFADTVRANLTLGRDVGD
                     EELAAALDVAAATDFVAGLTEGLDTVVGERGVTLSGGQRQRLAIARALLRRPAVLVLD
                     DATSAIDPVVEAGILNTLRRPTDHESDRLVAGSPLARPTLLVVAHRLATIRLADRVLF
                     LDGGRIATSGTHEELLEVEGYAALARAYELAGGVSVATGSVGPTGSRPIGEPR"
     gene            5881..7665
                     /locus_tag="QGG16_03020"
     CDS             5881..7665
                     /locus_tag="QGG16_03020"
                     /inference="COORDINATES: protein motif:HMM:NF012869.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJP24280.1"
                     /translation="MSDADPRRIEGVSALSVLRRGMAASPELRVGLPQTVAMAMSVAG
                     GKLLVPLLIQAVMDLSITNDGIHMGRAVALCVGATVLVVASIQLGKVTYFRLVRTAEN
                     VLLGLRVRTFEHLHRLSLAEHTTSRKGVLTARVTSDVETLTQFAQWGAIAWIIDSVQI
                     VTVLIIMAVYSWQLTVVVLVLHLPLLPILRWMQSRQLVAYEDLRTRVSDTLGIVSESV
                     HGVEVVRAYGHRESMRGRVRAAIDSQFDQQMKAARYFSLILPLSDVFGVTAIAAVIGA
                     GVWWGDAWGVSSGQLVAFIFLCNLLVAPISELGEVLDQTQTALAGWWKILDVLDTEVD
                     LIDPSTPLPLPVGALAVRAEAVEFRYRTGGPVLHGIDVDLAAGASVAVVGETGSGKTT
                     FARLLTRLADPTGGRMRVGGVDLRDASPEDRRRSIRMVPQDGFLFDTSVAQNIRYGRV
                     GATDADVIDAVEALGLTAWVSGLVDGIDTRVGERGEGLSVGERQLVALARAQLADPGL
                     LVLDEATSAVDPETETTLERAMERLAAGRTTVSVAHRLSTAERSDLVLVFDDGRIVES
                     GPHTELVERGGVYAGLYASWLGGTRQLS"
     gene            7665..8447
                     /locus_tag="QGG16_03025"
     CDS             7665..8447
                     /locus_tag="QGG16_03025"
                     /inference="COORDINATES: protein motif:HMM:NF014625.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HJP24281.1"
                     /translation="MVAPLDPVAGRRATDWDDVVARLPEIDPWPPDGPIVLVAPHPDD
                     ELLAAGATLAAASDAGTEIRVLAATDGELSHPHLSDAGRRDLVERRLAETAAAYVAAG
                     IEPTRTRLSLPDFGAHGDADAWGAALAAGLVPLLDGASVCLAPWPSDGHPDHDVCGRV
                     AAIVAADAGVKLISFPVWSWNWDDPSGPQIPFPQAARFDLDSDLLDRKRAGIDAYASQ
                     IRSEDGRRPVLPAEFLAHFTRPAEVFLLPPDWLPDGCSGPGT"
     gene            8588..9577
                     /locus_tag="QGG16_03030"
     CDS             8588..9577
                     /locus_tag="QGG16_03030"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016615 - malate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006108 - malate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HJP24282.1"
                     /translation="MSATPIRVAVTGAAGQIGYSLVFRIASGALLGSDQPVILQMLEI
                     PPAMGALDGVAMELDDCAFPLLAGMVLSDDPGTAFEGADVALLVGSRPRSAGMERQDL
                     LEANGAIFTVQGRALNDHASDDLKVLVVGNPANTNCLIAMNSAPDVPDERFTAMMRLD
                     HNRAMTQVAQRASVPVADVSRMTIWGNHSATQYPDLFHCEVGGRSAATVIDDQAWLEG
                     EFIPTVQQRGAAIIAARGASSAASAANAAINHVHDWVLGTGEGDWVSMGVPSDGSYGV
                     PEGLLCGLPVTCIDGRWSVVQGLELNEFSRARIDASVAELESEREMVRGLGLV"
     gene            complement(9594..9941)
                     /locus_tag="QGG16_03035"
     CDS             complement(9594..9941)
                     /locus_tag="QGG16_03035"
                     /inference="COORDINATES: protein motif:HMM:NF014132.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 sterol-binding domain-containing protein"
                     /protein_id="HJP24283.1"
                     /translation="MAEPLTDAWIEALADAARGRTVSTGITLVLEYRVVDGPAWHLTV
                     AHGEIRVDAGPAEAPDVSFQAERATALAMADGSLDPLRAVIDGDLLLHGDPRTLVANR
                     DVLDDLGDLFASC"
     gene            10036..>10279
                     /locus_tag="QGG16_03040"
     CDS             10036..>10279
                     /locus_tag="QGG16_03040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24284.1"
                     /translation="MTEQREVGRGQKTYDFGTVRGRWLRLENAEDVLDLMDRETGAEG
                     VVAVIRDAGATFLGPIFDELTGVVCTGGTIRSHIGII"
BASE COUNT         1571 a         3263 c         3581 g         1864 t
ORIGIN      
        1 cgaggtggac gccggtccga ttctcgccca gcaggaggtg cccgtctgtc ccgacgacga
       61 cgaggtctcg ctgcatgaac gcatcgaggt ggtcgagcgt cgcctgtacg tcgacaccct
      121 gcgggcggtc ctcgatggcg atatctcgct cgaatcggtc cagtctcgat ccgcatccgc
      181 ctctgagccc gcaactaaag gagccacctc gtgagccccg ccaccaagcc cagtccccgt
      241 cgtgccctgc tctctgtcta cgacaaggtg ggcatcgtgg acctggcccg tggcctggtg
      301 gatctggggt gggaactggt gtccagtggc gggacggcat cacttctggc cggcgagggc
      361 attccagtga tcgaggtggc tgagatcacc ggggtgacag agatgctggg tgggcgtgtc
      421 aagactctcc acccgatggt ccacggaggg atcctggctg accgatccga cccgtcccac
      481 gtgcgcgacc tgcgagagcg gggcatcacc cccatcgacc tggtggtggg gaacctctac
      541 tcgttctcgt cggatccgca catcgaactg atcgatatcg gtgggccgac catggtccgt
      601 gccgcggcca agaaccacgc ccacgtcggc gtggtcgtgg acccggccga ctacgacggt
      661 ctgttggctg aactgcgggc tgacgggtcg ctatcggatg cgacccgcca ccagctggcc
      721 cgggaggcgt ttgctcacac tgcggcttac gacgccgcga tcgtccagtg gttcgacgga
      781 ccggattcgg gcaggcccga cgcggacggg tctggtgcca gtgatcccga tccgctcaag
      841 ccgtcgatgc atctggcgct ggagcgcgtt caggacctcc gctacggcga gaacccccac
      901 caggtggggg cccggtaccg cacagtcggt tcgtcgggat ggtgggatac cgcggtggtg
      961 cacggcggca aggccatgtc gtatctgaac ctgttggaca ctgaggcggc gtggcgtctg
     1021 gtccacgccc tgggtgatcc tggtgtgaca gcgggtgccg acgagccgac ggcggtggtc
     1081 atcaagcatg ccaacccgtg cggggcggcg gtcggtgttg acatcgccga ggcctacgtg
     1141 gcggcccacg agtgcgaccc ggtctcggcg ttcggcggga ttgtggccgt caaccgaccg
     1201 gtgaccttgg ccatggccga gtcgctgtcg acggtgttca ccgaggtggt ggtggcacca
     1261 gactatgaat ccgatgccct agcccacctc cagcagaagg ccaacctacg gatccttgag
     1321 gccgagccgc ccacctggcc ggaactcgac gtacgggtca tcgacggagg tctgctggtc
     1381 cagactgctg accggctggt cgccgagccg tcccagtggc aggtggtgac cgagcgagaa
     1441 cccacagttg gggagtgggc cgatctggtc ttcgcttggc gggtagctgc ccgggtcaac
     1501 tccaactcca tcgtgctggc taagggcctt cgggcggtgg gtatcggcgc cggccagcag
     1561 aaccgccgcg atgccggacg gatcgccgcg gacaaggcag ccgggcgggc cgctggtggc
     1621 gcatgcgcca gtgacgcctt tttcccgttt cgtgatggcc tggacgcggc ggccgaggcg
     1681 ggggccagcg cggtggtcca gcccggcggg tcgatacgtg acgatgaggt gatcgcggcg
     1741 gcgaacgaac agggtatggc catggtcttc accggggaac ggcactttcg ccactgatcg
     1801 gcgccaggca aagggccggg cgggcgccga tagcgttccc gcccatgagt gcacaacttc
     1861 tcgaaggagg accggtcgct aaggctgtcc tcgacgacgt ccgtatccgg gtcgacgctc
     1921 tgaaggccgc cgggattacc ccgggcctgg gcaccatcct cgttggggac gacggggcga
     1981 gcgccggcta cgtccgcaag aagcacgaga cctgcgagtt ggtgggcatc gcgtcccacc
     2041 acatccaggt ggtggccggc gaccctccgg cggccctcga cgaggcggtg gcaaatttca
     2101 acgaggatcc gacggtccac ggctacatca tccagcatcc ggtggccgac ggtttcgact
     2161 tcaacgccgc cctgttggcc atggatccgg ccaaggacgc cgacggcctg caccccacca
     2221 atctgggtcg cctcgtcctc caggaggacg gccccgtgcc gtgcaccccg gcgggcattc
     2281 aggccctgtt cgtccactac gacatcgaga tcagcgggaa gcatgtggtg gttatcgggc
     2341 gtggcccgac tcttggtcga cccctgtctc tgctcctgac caccaaggca ccgggggcca
     2401 acgccgcagt gaccgtggtg cactcggcgg tgcccgacct ggccgatctg acccgtgagg
     2461 ccgacatcgt ggtggccgcc ctaggcgtgc cgtcctttgt ccagcccgag atggtcaaac
     2521 ccggtgcggt cgtggtgagt ggcgggatct cctgggaagg aaagaagctt ttggccgacg
     2581 tcgacgagtc ggtcggcgag gtcgcctcgt ggatcacgcc gcgccttggt ggcgtggggc
     2641 cgaccactgt ggccatgctc cttcgcaaca ctgtcgaggc cgccgaacgc gcctgaggct
     2701 caggccgagc cggttcggtt cggcaccaag cgcgaccccg tctgacgcat cgaccgccgt
     2761 ccggaccaga cgggtccctc ggggcctcga atcggtaggg tcaaaccatg gcagacaaga
     2821 tcaccatggg tgtcgacggc gctttgcagg tgcccaccga tccgatcatt ccgttcatcg
     2881 aaggcgacgg caccggcatc gacatttggc cggcggcccg ccttgtattg gacgccgccg
     2941 cggctaagca cggccacacc gtggagtgga aggaggtcct cgccggtgag aaggcctaca
     3001 acgagaccgg tgactggctt ccccaggaga cggtcgacat cttttccgag tacctgatcg
     3061 gcatcaaggg cccgctgacc acgccgatcg gcggtggatt tcgcagtctg aacgtggccc
     3121 ttcgccagat tcttgaccta tatgtgtgcc tccgcccggt gcgttggttc cggggtgtcc
     3181 catcgccggt gaagcaccct gaactggtcg acatggtcat attccgtgaa aacacggagg
     3241 acatctacgc cggccttgag gtcgaggcca tgacgcccga cgccctcaag ttgcgcgagc
     3301 ttctcgagga cgccttcggg tggcggatcc gtgaggattc aggcatcggt atcaagccga
     3361 tctccaagac cggttcgcag cgccttcagc gggcggccct gcagtacgcg gtggatcgcg
     3421 ggcttccccg ggtccactgg gtacacaagg gcaacattat gaaattcacc gagggcgctt
     3481 tccagaagtg gggctacgaa ctggtccgcg aggagttctc tgacgtggcg gtgggctggg
     3541 acgactgtga cggcgacccg ggcgatcggg tcctcgtgca ggattccatt gccgacatag
     3601 ccctccagca ggtgctgacc cgaccggcag agttcgacgt gatcgccacc atgaacctca
     3661 acggcgacta tctgtctgat gccttggccg cgcaggtcgg gggaatcggc attgccccgg
     3721 gtggcaacgc caactacgtc accgggcacg gcatcttcga ggccacccac ggcacggcgc
     3781 ccaagtacgc cggacaggac aaggtcaacc cgtcatcggt gcttctgtcg ggcgtgctca
     3841 tgttcgaaca catcgggtgg caggatgcgg ccgatgacat cgttcgagcc gtggagtcgg
     3901 cagtgaccga caaggtcgtg acctacgact tcgcccgcct gatggacggt gcgaccgagg
     3961 tgaagtgctc ggagttcgcc tcggccgtcg tcgaccggct ctgagtacgc gacccgggca
     4021 cctcgtgccc gagagtgtgg tgcgtcgcgg aggacggctg atctggcggt cactgcgtct
     4081 gcatccgtgg tcccatgcgg cggccatcat gggggccaac gtgttcgccc tagccgtggt
     4141 gggcttcacg gtggtgatcg gtcggatcac cgacgaggtg atcgtccctg ggctagatga
     4201 cgatggtgtg tcgcgacgct cgctgctggt cgctgtggcc gtggtggtag ctgtcggggt
     4261 ggtcagggcc ctgtcgatca tggttcgccg ctggttcaac atgctggcca ccgtgagtac
     4321 ccagcgcacg tggcgtgagg cggtcaccga ccggttcctg gatgtgcccc tggccttcca
     4381 ccgggctcgg cccgctggcc agttgctggc ccacgccgat gccgacgtgg aggtagcgac
     4441 ctcgatgctc aagccgttgg ccttctcgtt gtcggtgatc gtgctggctg tggcatccct
     4501 cgtcagcctc ctggttgttc acccgtggtt cgctttggtg gccgtggtga tgtttcccac
     4561 gttgactctt ctgaatcggc gattcacccg gaaggtggag gctccggccg ccgccggaca
     4621 ggaggccgtt ggcgtcttgt caggcattgc ccacgagagc ttggatggcg ttctgatcgt
     4681 caagacgttg ggtcgggagg ccgccgaggt ggaccgattc tccgatgcgg ccaatgacct
     4741 ccggaaccac cgtctggcgg ttggcaggct ccgctcgaga tacgcccccc tctactattc
     4801 gctgccccag atcgggatca tcgtcctgct gctggtgggg gtgtggttgg tcgacagcgg
     4861 ctcggtgacc attggcgagg tggtccgggc catgtcgttg ttcagcatcc tgaccctgcc
     4921 catggagatc ctggggttcc tgttccagga gatgccccgg tccgtggtgg ctatggatcg
     4981 gatcgacggg gtgctggccg aggcgatcga gccccggccc gaggccagca cgggttccgc
     5041 ccgacatgac gcaggaccgg ttgtcgtcga gttcgaggcc gtggccttca cccatcccga
     5101 cggtctcgag gtgctccgtg acctcgacct gcgactagag cccggcgagt cggtggccct
     5161 cgtcggcgcc acgggctcgg gaaagagcac ggtggtggct ctgctggccg gcctggtacc
     5221 cccaagtagc ggcgaggtcc gcattggagc taaggcgacc accacactgg gtcccgaggg
     5281 ggtggccgtc tcggtggcca ccgtcctcca ggagacattc ctgttcgctg acacggttcg
     5341 ggcgaacctg acgctgggtc gcgatgtagg cgacgaggag ttggctgctg ccctggacgt
     5401 cgcggcggcc actgatttcg tggccggcct taccgaggga ctggacaccg tggtcggtga
     5461 gcggggagtg accctgtctg gtggccagcg gcaacgtctg gctattgccc gggccctgct
     5521 ccgacgcccc gccgtgctgg tgctggacga tgccacgtcg gccatcgacc cggtggtcga
     5581 ggcggggatc ctgaacacac tgcgtcgccc caccgatcac gagtcggatc ggctagtggc
     5641 gggctcccca ctggcgcgtc ccaccctcct agtggtggcc catcgtctgg ccaccattcg
     5701 gttggccgac cgggtgctgt tcctcgacgg cggtcggatc gctacttcgg gaacccacga
     5761 ggaactcctc gaggtggagg gctatgcggc tctggctagg gcctacgaac tagcgggcgg
     5821 ggtttcggtg gcgactggtt cggtgggccc gactgggtct agaccgatcg gggagccccg
     5881 gtgagcgacg ctgatccccg tcgcatcgag ggggtgagtg ccctatcggt gctgcgccgc
     5941 ggcatggcgg cctcgcccga actgcgggtg ggccttcccc agacggtggc catggcgatg
     6001 tcagtggccg gaggaaaact tctggtaccg ctgctcattc aggccgtgat ggacctgtcg
     6061 atcaccaacg acggcataca catgggtcga gcggtggcgc tctgtgttgg ggccacggtg
     6121 ctggtggtgg ccagcattca gttggggaag gtgacctact ttcgtctcgt ccgcaccgcc
     6181 gagaacgtcc tgctgggcct ccgggtccgc acgtttgaac acctccaccg gttgagcctg
     6241 gccgagcaca cgacatcacg gaagggtgtg ctcaccgccc gggtgaccag cgacgtggag
     6301 acgctcaccc agttcgccca gtggggggcc attgcctgga ttatcgactc ggtccagata
     6361 gtcaccgtgc tgatcatcat ggcggtctac tcgtggcagc tgactgtggt ggtcctggtg
     6421 ctgcaccttc cgctgctgcc catcctgcgg tggatgcagt cccgtcaact ggtggcgtac
     6481 gaggatcttc ggacccgggt atcagacacc cttgggatcg tttctgagtc ggtccacggg
     6541 gtcgaggtgg ttcgggccta cggccatcgc gagtccatgc ggggtcgggt tcgagcggcc
     6601 attgactccc agttcgacca gcagatgaag gccgcccggt acttctcgct gatcctgccg
     6661 ttgagcgacg tattcggggt gacggctatt gccgcggtta tcggcgccgg cgtgtggtgg
     6721 ggcgatgcgt ggggtgtgag ctcaggccag ttggtggctt tcatcttcct gtgcaacctg
     6781 ctggtggcgc caatcagcga gcttggagaa gtgctcgacc agacccagac ggcgttggcc
     6841 ggctggtgga agatcctcga tgtgcttgac accgaggtgg acctgatcga tccgtccaca
     6901 ccactgccgc tgcccgttgg ggcactggcc gtgcgggccg aggcagtcga gttccgctac
     6961 cggaccggtg gtccggtgct ccacgggatc gacgtcgatc tggccgccgg cgcgtcggtg
     7021 gccgtggtgg gcgagaccgg atcaggaaag accaccttcg cccgcctgct gacccgtctg
     7081 gccgacccca ccggaggccg gatgcgcgtc ggtggggtgg acctccggga cgcttcgccg
     7141 gaggatcgcc gtcgctctat tcggatggtt cctcaggacg gcttcttgtt cgacacgtcg
     7201 gtcgcccaga acatccggta cggacgggtg ggcgccaccg atgccgacgt gatcgacgcg
     7261 gtcgaggccc tcggactgac cgcttgggtg tccggtctgg tggacgggat cgacacccgg
     7321 gtgggtgaac ggggcgaggg gttgtcggtc ggtgagcgcc agttggtggc cctggcgagg
     7381 gcgcagctag ccgaccccgg cctgctggtg ctcgacgagg cgacctcggc ggtggatccg
     7441 gagaccgaga cgacgttgga gcgggccatg gagcggctgg ccgccgggcg aaccacggtc
     7501 agtgtggccc accggttgtc gaccgccgag cgttctgatt tggtactggt gttcgatgat
     7561 ggtcggatcg tcgagtccgg accccacacc gaactggtgg agcggggtgg ggtctacgcc
     7621 ggcctgtacg cctcatggct gggcggcacc cggcaactgt cctgatggtg gcaccgctcg
     7681 atccggtggc cggtcgcagg gccaccgact gggacgacgt ggtggctcgc ctgccggaaa
     7741 ttgacccctg gccaccggac ggtccgatcg tgctggtggc cccccatccc gacgacgagt
     7801 tgctggccgc tggcgccacg ctggctgcgg cgtccgacgc cggtacagag atccgggtgc
     7861 tggccgctac cgacggcgag ctgtcccatc cgcatctgtc cgatgccggt cggcgcgacc
     7921 tagtggagcg acgtctagcc gaaactgcag cggcctacgt ggccgcgggg atcgagccca
     7981 cccgaacgag gctgtcgcta cccgacttcg gtgcccacgg ggatgctgac gcctggggcg
     8041 ccgccctcgc tgcaggtcta gtaccgctgc tggatggagc ctccgtctgt ctggcgccgt
     8101 ggcctagcga cggccatccg gatcacgacg tgtgcgggcg ggtggctgcc atcgtggccg
     8161 ccgacgccgg cgtaaaactg atttcgtttc cggtctggtc atggaactgg gacgatccca
     8221 gtggcccgca gattccgttc ccgcaggctg cccggttcga cctcgacagt gacctgctgg
     8281 acaggaagcg ggccggcatc gacgcctacg ccagccagat ccgatcggag gacggacgcc
     8341 gaccggtgct gccggcggag tttctggccc acttcacccg ccccgccgag gtcttccttc
     8401 tcccgcccga ttggctgcct gacggctgct ccggccctgg aacctgagcc ctctgtcacc
     8461 cgggcgcggt ggggaccgct cgggaaccga tcggtagcct cgggtgtgac ctcctgcgag
     8521 caggccccgc ttgcattcca gtaaccagta gtcccagaaa cccgtctccc cgaaatagga
     8581 gcccaccatg agtgccacac ccattcgcgt cgccgtcacc ggtgccgccg gtcagattgg
     8641 ctacagcctc gtcttccgca tcgccagtgg tgcgctccta ggttcagacc agccggtcat
     8701 cctccagatg ctggagatcc caccggccat gggtgcgctc gacggcgtag ccatggaact
     8761 cgacgactgc gccttcccgt tgctggccgg catggtcctg agcgatgacc cgggtaccgc
     8821 cttcgagggt gccgacgtgg cactgctggt cggctcccgc ccccggagtg cgggcatgga
     8881 acgccaggat ctactcgagg ccaatggggc catcttcacc gtgcaaggtc gggcactgaa
     8941 cgatcacgca tccgacgacc tgaaggttct ggtggtcggt aacccggcca acaccaactg
     9001 cctcatcgcc atgaatagcg cgccggacgt tcccgatgaa cgcttcaccg ccatgatgcg
     9061 tctggaccac aatcgggcca tgacccaggt agctcagagg gcgagcgttc cagtggccga
     9121 cgtgtcccga atgacgatct ggggtaatca ctcggccacc cagtatccgg acctgttcca
     9181 ctgcgaagtg ggcggccggt cggcggcgac cgtcatcgac gaccaggctt ggctagaggg
     9241 cgagttcatt cccactgtgc agcaacgcgg ggcagccatc atcgctgccc ggggcgcatc
     9301 gagcgcagcg tcggcggcca acgcggccat caaccacgta cacgattggg tgttgggcac
     9361 cggtgaaggt gactgggtga gtatgggtgt gccatccgac ggcagctacg gcgtgcccga
     9421 ggggctgcta tgtggcctgc ccgtcacgtg catagatggc cgctggtcgg tggtgcaggg
     9481 tctagaactt aacgagttct cccgtgcccg gatcgacgct tcggtggctg agctggagtc
     9541 cgagcgcgag atggtccggg gcctcggctt ggtctaggtc gaagactgcc gtttcaacag
     9601 ctggcgaaca ggtcgccgag gtcgtcgagc acatcgcggt tggcgaccag tgtgcgtgga
     9661 tcaccgtgta ggagcagatc gccgtcgatt accgcacgga gcgggtccag agatccgtcg
     9721 gccatggcca gggcagtggc ccgttcggcc tgaaacgaca catcgggtgc ttcggccggg
     9781 ccggcatcca cccggatctc gccgtgggcc accgtcaggt gccacgcggg gccgtcaacc
     9841 acccggtact ccaagaccag ggtgataccg gtggacaccg tccgtccgcg ggccgcgtcg
     9901 gccagtgcct caatccatgc atcggtgagc ggttcggcca tctgtcagag cctaggagcg
     9961 ggccacagcc tgatgggagg gtaagggtcg gcctggtgtc ggtggtcggg tcgtcacgga
    10021 tacggtcccg tcccaatgac ggagcagcgg gaagtcggcc ggggacagaa gacctacgac
    10081 ttcggaaccg tgcgcggtcg gtggcttcgc ctcgagaacg ccgaggacgt tctggacctt
    10141 atggaccgtg agacgggggc ggagggcgtg gtggccgtga tccgcgatgc tggggccacc
    10201 ttcctgggcc ccatcttcga cgagttgacc ggcgtggtgt gcacgggcgg gaccatccgg
    10261 agccatatcg ggatcatca
//
LOCUS       DASCMR010000126         2940 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000609949, whole genome shotgun sequence.
ACCESSION   DASCMR010000126 DASCMR010000000
VERSION     DASCMR010000126.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2940)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2940)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2940
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000609949"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1090)
                     /locus_tag="QGG16_03045"
     CDS             complement(<1..1090)
                     /locus_tag="QGG16_03045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24285.1"
                     /translation="MNGTENQTTTSTGRFHRLTSIFVSTSERLSGQMRSLTTKMIAVT
                     AIIVVAGTTALAPAAQAWSDEDVAVAVIFDGTSYGSMKDVSVAADGSLIACGHLRGST
                     DLDPDPINVAPINPGGSNQAGVVVKFDPAGNYEWHGVIRTPNGSVNSCVLGDDGSAYA
                     TGYFRSHAWVVSSSQTVTTGMGNNNDNAFVAKFAPDGTGEWIRSPKRKGGNPGDGARS
                     YGYGIDVDAAGNVYVTGQFRKHVDLNLDAGVTEYHNAGSKYDTYFIKLDTDGNTLWSH
                     SWGGVNDTVGRAVVVDNAGDIVVGGWTNPIAMDLDPDPVDVVSVGGTSGNDSNKQMWL
                     SKFKNDGDLSWGHSFGSGKKDMIYGLTVD"
     gene            complement(1267..2415)
                     /locus_tag="QGG16_03050"
     CDS             complement(1267..2415)
                     /locus_tag="QGG16_03050"
                     /inference="COORDINATES: protein motif:HMM:NF016497.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 43 protein"
                     /protein_id="HJP24286.1"
                     /translation="MRSLATKFITVTAIVVAGVTVVTPAAHAGSNNDDVMAPSNSVVE
                     PNIFDIEAFLTNDFDGLSGDTRDSLSKTIDHDAVIDLEVVSMPGVSSAGSLTDFEAAD
                     PEIVADGVDIYLYSTNTFVFGNPLNLPVRKLEFPEWKHHGDAMPKLGSWAEKGNTWAP
                     GVHEVDGRWVVYYTARVAGTTDDPAFPAGEQCIGVAVADEPTGPFVDSSDVPFICQHD
                     LGGSIDASPFTDVDGTMWLTWKSDSNAPHVGGVSRLYSQQLTVDGLGLVGSPTVLLVA
                     DRTWEQPLIENPDFVRRSDGTLMLTYSAGWWANSSYSTGMALCESPAGGCVKAGQWLT
                     TGDGLVGPGGASFLTIGGSQFVAFHAWHDGSVFNEGGFRSLAYTAIDL"
BASE COUNT          533 a          900 c          938 g          569 t
ORIGIN      
        1 cgtcgacggt gaggccgtag atcatgtcct tcttgcctga gccgaaggag tgtccccagg
       61 agaggtcgcc gtcgttcttg aacttcgaca gccacatctg cttgttggag tcgtttcccg
      121 acgtaccgcc gacagatacc acgtcgacgg gatccgggtc gaggtccatc gctatcgggt
      181 tggtccagcc accgacgacg atgtcgccgg cgttgtcgac gaccaccgca cggccgaccg
      241 tgtcgttgac gccgccccag gaatgggacc acagggtgtt gccgtccgtg tcgagcttga
      301 tgaagtaggt gtcgtacttg cttccggcgt tgtggtattc cgtgacgccg gcgtcgaggt
      361 tcaggtcgac gtgcttcctg aactgcccgg tgacgtagac gttgcctgcc gcgtcgacgt
      421 cgatgccgta gccgtagctg cgggcgccat cgccggggtt gccgcccttc ctcttcggcg
      481 aacggatcca ctcgccggtt ccgtcggggg cgaacttggc cacgaaggcg ttgtcgttgt
      541 tgttgcccat gccggtggtg accgtctggc tgctgctcac aacccacgca tgggaccgga
      601 agtaccctgt ggcgtacgcg ctgccgtcgt cgccgaggac gcagctgttg accgaaccgt
      661 tgggcgtgcg gatgacaccg tgccactcgt agttgccggc cgggtcgaac ttgacgacca
      721 cgcccgcctg gttcgagccg cccgggttga tgggggccac gttgatcggg tcggggtcca
      781 ggtcggtgga accacggagg tggccgcagg cgatgaggct gccatcagcg gcgacggaga
      841 cgtctttcat gctgccgtag ctggtgccgt cgaagatgac tgccacggca acgtcttcgt
      901 cggaccacgc ctgggcggca ggtgccaacg ctgtggttcc tgctacgacg atgatcgccg
      961 tcacggcgat catcttggtg gtcaaagaac gcatctgtcc tgacaaccgc tcggaagtcg
     1021 aaacgaagat gctggtcagg cggtggaaac gcccggtaga ggtggtggtc tggttctcgg
     1081 ttccgttcat gtatatgaag gtacggatga ggccttttcc ggtatccagg ccattcgtgt
     1141 gtccgtgacc cccatacatg aggggtcgcc cctaaacgac aaaaggcggc acctccacca
     1201 caactcgtcg ttgttcgccg cgcgcctagg tcaagtgagc gcgtaacgcc ttactgcttc
     1261 cgtggcctac aggtctatgg cggtatacgc cagggaacga aagccgccct cgttgaagac
     1321 ggaaccgtca tgccatgcat ggaacgcaac gaactggctg ccgccgatgg tgaggaacga
     1381 agccccacca ggcccgacca ggccgtcgcc ggtggtcaac cactggcctg ccttgacgca
     1441 gccacccgca ggtgactcac acagggccat cccggtcgaa tacgagctat tggcccacca
     1501 tccggccgaa tacgtgagca tcagcgttcc gtcggagcgc cggacgaagt ccgggttctc
     1561 gatgagcggc tgctcccacg tccggtcggc gaccaggagc acggtcggcg aaccgaccag
     1621 gcccaggccg tcaacggtga gctgctggga gtacaggcgt gagacgccac cgacatgcgg
     1681 ggcgttcgaa tctgacttcc aggtcaacca catggtgccg tccacatcgg taaatggcga
     1741 cgcgtcgatg ctgcctccca ggtcgtgctg gcagatgaac gggacatcgg acgagtcgac
     1801 gaacgggccc gtgggctcgt cggcgaccgc aactccgatg cactgctcgc cagcgggaaa
     1861 cgccggatcg tcagtggttc cagccacccg ggccgtgtag tacacgaccc acctgccatc
     1921 gacctcgtgg acaccaggtg cccacgtgtt gcccttctcg gcccatgagc cgagcttcgg
     1981 cattgcgtcg ccgtggtgct tccactcggg aaactccaac ttgcgaaccg gcaggttcaa
     2041 cggattgccg aatacgaacg tattcgtcga atacaggtag atgtccacac cgtcggcgac
     2101 gatctcgggg tcggcagctt cgaagtccgt cagggagccc gcagatgaga cgcctggcat
     2161 gctgacaacc tcgagatcga tgacggcgtc gtggtcgatg gtcttcgaca gtgagtctcg
     2221 ggtgtcgccg gagaggccgt cgaagtcgtt ggtcaggaag gcttcgatgt cgaatatgtt
     2281 gggctcgacg acgctgttcg acggggccat gacgtcgtca ttgttcgacc ccgcatgggc
     2341 agctggcgtg accacagtga cgcctgcgac gacgattgcc gtcacggtga tgaacttggt
     2401 ggccagggac cgcatcggca ctaccgacca tccgctggtg gcagcaaaag tgctgttcag
     2461 acagcgaaaa cgcctgtttg gtgtactcct cctgttcatg tacatgaagg tacgaacgag
     2521 gctttttggc gtacccagac cgtctgtgtg tccttgaccc ccatacctga ggggtcgccc
     2581 ctaaacgaca aaaacggccc cgaagggccg tcatctcagt ttgttcgccg cacccctaga
     2641 tcaagtgagc gagtaacgcc ttgtcgttgt tggggctcaa aggaaacccg acgggaactg
     2701 tgccgtgatc gtcacgcttg actaaccgcc gtcgacagct ggccgaagaa gctcgaccga
     2761 cgccctcgtc ggaaggtcgg ccgacgtgat tctggacgcg tcagggccct ctgataccca
     2821 gcctgagatc acccgtaacc agatgttctg gccggctgcc gccagctttg acggcgacta
     2881 cctgtgggtc ggtgagcgga agctttgggt cgcttagtcc gcttcaatcc caccgggtag
//
LOCUS       DASCMR010000127         1578 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000613762, whole genome shotgun sequence.
ACCESSION   DASCMR010000127 DASCMR010000000
VERSION     DASCMR010000127.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1578)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1578)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1578
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000613762"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..745)
                     /locus_tag="QGG16_03055"
     CDS             complement(<1..745)
                     /locus_tag="QGG16_03055"
                     /inference="COORDINATES: protein motif:HMM:NF012673.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase"
                     /protein_id="HJP24287.1"
                     /translation="MDHSSDKPADAGVEEIAVDPTMVLSALHDSVDVVVAALAEHEDW
                     GPSGRRGGQYASDVVADQAVHDLLDPRGYGVLSEESGLREPDLDGMPVVVVDPLDGST
                     NASRGLPWFATSLCAVDGNGPLAAVVVDLISGTRYDAVRGWGARRDGESIRRTDAPVL
                     SEAIIGLSGLPPRHLGWGQFRAMGAAALDLCAVADGRLDGYMDCSVDAHGVWDYLGAL
                     LVCAEAGVEVVDAHGRDLCLLDPDARRTPV"
     gene            878..1459
                     /locus_tag="QGG16_03060"
     CDS             878..1459
                     /locus_tag="QGG16_03060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24288.1"
                     /translation="MAVVDIAGFVADLKDHAADHGFHVHDERHFVETYSMHQAFEVDL
                     HPEAACGGPLDLRLSLDIEVRTLLAFEDEVMSIPEDQDPSDDLIINLVFSWALPPLDH
                     GPDLLVLATELAGLGGPDLPTQVSAVDSFEAVTDAPQRSLGVTARLETPLAALMRGGE
                     ADWLCDALERSRAISEYLLDRAPAWLGDGFEGF"
BASE COUNT          271 a          569 c          481 g          257 t
ORIGIN      
        1 ccaccggggt ccgtcgggca tcgggatcca acaaacacag gtcccggcca tgggcgtcga
       61 ccacctccac gccggcctca gcgcagacca gcagagcgcc caggtagtcc cacacgccgt
      121 gggcgtcgac cgagcagtcc atgtaaccat cgagacgtcc gtcagccacc gcgcacaaat
      181 cgagcgctgc cgcgcccatg gcccgaaact gaccccagcc gaggtggcgg ggcggaagac
      241 ccgacagccc gataatcgct tcgctcagca ccggggcgtc ggtccgccgg atcgactcgc
      301 cgtcgcgtct ggctccccac ccccgcacag cgtcgtaccg ggtaccggag atcaggtcga
      361 ccacgaccgc ggccaatggt ccgtttccat cgaccgcgca gaggctggtg gcgaaccagg
      421 gcaacccccg tgaggcattg gtggaaccat ccaacgggtc cacgaccacc accggcatgc
      481 cgtcgagatc aggctcccgt aggcccgact cctcgctcag caccccgtaa ccccggggat
      541 ccagcaggtc atggaccgcc tggtcggcca ctacgtcact ggcgtattgg ccgccgcgtc
      601 gacccgacgg accccagtcc tcgtgttcgg caagcgcggc aaccacgacg tcgactgagt
      661 cgtggagagc gctcaggacc atcgtcggat cgacggctat ctcctccacc ccggcatccg
      721 ctggtttgtc tgacgagtgg tccacccggc cagtctgcca aacccccatg gctcgcatgt
      781 cggggtggct ctacgctgtc ccgacacgcc ccccacggac ccgtggggta ggcccgagat
      841 tcagagaccc gagacccgga cagcggagag gaaccacgtg gccgtcgtcg atatcgcagg
      901 ctttgttgcc gatctcaagg accacgcggc cgaccacgga tttcacgtcc acgacgagcg
      961 ccactttgtc gagacctact ccatgcacca ggccttcgag gtcgacctgc atcctgaggc
     1021 agcgtgcggc ggacctctcg atcttcgcct ttcgctggac atcgaggtcc ggacacttct
     1081 ggccttcgag gacgaggtca tgtccatccc cgaggatcag gaccccagtg atgacctgat
     1141 tatcaacctg gtgttcagtt gggcattgcc gccgttggac cacggccccg acctcctcgt
     1201 gctggctacc gagttggctg gcctgggagg gcccgacctg ccgacccagg tgtcggccgt
     1261 cgactccttt gaggctgtga ccgacgcccc tcaacgatcc ctcggcgtga cagcccgact
     1321 ggagacaccg ttagccgccc tcatgcgcgg tggtgaagcc gactggctgt gcgacgccct
     1381 cgagcggtcc cgggcaatca gcgagtacct cttggatcgg gcgccggcgt ggctcggtga
     1441 cggcttcgag gggttctagg gcaatagttc cggggtatgc cctccgatca tctggctgac
     1501 gcccccttag acgcaccttt cgacacaggc gaaaccgatc gcctgctttc caccacccgg
     1561 gcggtgcggc ggcgtctg
//
LOCUS       DASCMR010000128         2160 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000619472, whole genome shotgun sequence.
ACCESSION   DASCMR010000128 DASCMR010000000
VERSION     DASCMR010000128.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2160)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2160)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2160
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000619472"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..568
                     /locus_tag="QGG16_03065"
     CDS             <1..568
                     /locus_tag="QGG16_03065"
                     /inference="COORDINATES: protein motif:HMM:NF015297.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HJP24289.1"
                     /translation="VVPKIESVAAVDAVAAALDAAGHPDLPIVAGLETVAGVVDARTV
                     TTHPRVQWCYFGAEDYIADLGGVRTPGNHEVAVARAQIAQAAHLGGIQAIDMVVTDFG
                     DEDRFRREAIESRSLGFSGKLCIHPSQVPIATEAFRPSADELAWATEIAEAYDAALAA
                     GDASIAVNGKMVDEPVARRARALLAAAD"
     gene            627..1571
                     /locus_tag="QGG16_03070"
     CDS             627..1571
                     /locus_tag="QGG16_03070"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03619 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HJP24290.1"
                     /translation="MASITPEGGALYGIQLPIQTLTRTLADPWEDDATPADLLRVARA
                     AEAAGLDFVGVCDHVAIPDDEYTSGMRTTWYDPVATLAWLGARTESIRLLSVVLIAAY
                     RHPLLTASSFGTLAHLTDERVILGVGAGHVEGEFAALGVDYHRRGKLLDECIDAVRGA
                     YVDTYVSHDGPQYSYRDVGVSPGPASSDLPIWVGGAGSAAWKRTGRRGDGYIPMGASR
                     DQYAEIIDTIRRAADEAGRPDATFDIGIMPGWTYIGDPPDDLPPAWLTGDPEHIAAEL
                     RADRDVGANVFHLKFRGRTIEEYLDQLSAFGEQVRPLL"
     gene            1683..>2160
                     /locus_tag="QGG16_03075"
     CDS             1683..>2160
                     /locus_tag="QGG16_03075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24291.1"
                     /translation="MKVDDDTQKALLLFNRRAEAAEAAKTAERRLAKAVKAKDEAAEA
                     FKRAQNGRDGAEAVSEAESTWREAVDLWQRLRDGEEVPETEATPNNEAPDEETAEEAP
                     SEEAPAEETADDTPDEETAEEAPSEEAPAEETADETPDEETAEEAPSEEAPAEETAD"
BASE COUNT          418 a          774 c          674 g          294 t
ORIGIN      
        1 ggtcgtcccc aaaatcgaat cggtagccgc cgtcgatgcc gtagccgctg ccctcgacgc
       61 tgcaggccac cccgacctcc ccatcgtcgc cgggttggag accgtggccg gagtagtcga
      121 tgcccgcacc gtcaccaccc atccacgggt ccagtggtgc tacttcggcg ccgaggacta
      181 catcgccgac ctaggaggtg tccgtacccc gggcaaccac gaggtggccg tcgctcgtgc
      241 ccagatcgcc caggcggcgc accttggtgg gattcaggcc atcgacatgg tggtgaccga
      301 cttcggagac gaggaccgct tccgtcgcga ggccatcgag tcacgctccc tcggcttcag
      361 cgggaaactc tgcatccacc cttcacaagt gccgatcgcc accgaagcct tccggccgtc
      421 ggccgatgaa ctggcctggg ccaccgagat cgccgaggct tacgacgctg ctctggccgc
      481 cggcgatgcc tccatcgccg tgaacggcaa aatggtcgac gaaccggtgg cccgccgtgc
      541 ccgagccctg ctggccgccg ccgattgacc cacggcccgt cccgaaccgg ccctcgacaa
      601 ccgccaccca ggagaccagc acaccgatgg ccagcatcac acccgagggc ggagccctct
      661 acgggatcca acttcccatc caaaccctta cccggacgct ggccgacccc tgggaagacg
      721 acgccacgcc ggccgacctc ctccgggtgg cccgggccgc cgaggccgcc ggcctcgact
      781 ttgtcggggt gtgtgatcac gtggccatcc ccgacgacga gtacacgtca ggcatgcgaa
      841 ccacctggta tgacccggtg gccacgctcg cttggctggg ggcccggacc gagtccatcc
      901 ggctgctctc ggtcgtgctc atcgccgcct accgccaccc cctcctcacg gccagctcct
      961 tcggcacact ggcccacctc actgacgagc gggtgatcct cggggtcggt gccggtcacg
     1021 tagagggaga gttcgccgcc ctcggcgtcg actaccaccg tcgcggaaag ctcctcgacg
     1081 aatgcatcga cgccgttcgg ggggcatacg tcgacaccta cgtcagccac gatggccccc
     1141 agtactccta ccgcgacgtt ggggtgagcc ctggcccagc atccagcgat ctccccatct
     1201 gggtgggcgg cgcagggtcc gccgcctgga agcgaaccgg tcgacgcgga gacggctaca
     1261 tccccatggg cgcctcgcgc gaccagtacg cggagatcat cgacaccatc cgtcgggccg
     1321 ccgacgaggc cgggcgaccg gatgccacct tcgacatcgg gatcatgccc ggttggacct
     1381 acatcggtga ccctcccgac gatctgccac cggcctggct gaccggcgat cccgaacaca
     1441 ttgccgccga actccgagcc gaccgcgatg tgggcgcgaa cgtcttccac ctcaagttcc
     1501 gtggacgcac catcgaggaa tatctggacc aattgtctgc cttcggtgag caagtccgac
     1561 ccctgctctg aacggacgcc agaggacgtg aatcgtcaag tacccacatc gagggtggga
     1621 ctggcccccg gatcggcgat catggggcag cgaatatttt gagggatgtc catggaggca
     1681 cgatgaaggt cgatgacgac acccagaagg cgctgctgtt gttcaaccgg cgcgctgagg
     1741 ctgccgaggc cgccaagacc gctgagcgac ggctggctaa ggctgtaaag gccaaggacg
     1801 aagctgccga ggcgttcaaa cgcgcccaga acggccgaga cggtgccgag gctgtcagcg
     1861 aggccgagtc gacatggcgc gaggccgtcg acctctggca gcgcctgcgc gacggtgagg
     1921 aggtccccga aacggaggcc acgccgaaca acgaagcccc agacgaagaa actgctgaag
     1981 aggcgcccag cgaagaagcc cccgcggaag aaaccgccga cgacacccca gacgaagaaa
     2041 ctgctgaaga ggcgcccagc gaagaagccc ccgcggaaga aaccgccgac gagaccccag
     2101 acgaagaaac tgctgaagag gcgcccagcg aagaagcccc cgcggaagaa accgccgacg
//
LOCUS       DASCMR010000129        14163 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000619854, whole genome shotgun sequence.
ACCESSION   DASCMR010000129 DASCMR010000000
VERSION     DASCMR010000129.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 14163)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14163)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14163
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000619854"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..282)
                     /locus_tag="QGG16_03080"
     CDS             complement(<1..282)
                     /locus_tag="QGG16_03080"
                     /inference="COORDINATES: protein motif:HMM:NF013225.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HJP24292.1"
                     /translation="MTTDPDAWEPLLDDLHGRRAAARAMGGEDRLARHRDKGGGDRLD
                     ARARIDHLLDDGSFHEIGTLVEPPGDAAPADGIVTGSGTIDGRPVMIGAE"
     gene            complement(302..682)
                     /locus_tag="QGG16_03085"
     CDS             complement(302..682)
                     /locus_tag="QGG16_03085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24293.1"
                     /translation="MVVSLSAVALSVAGLVTGCGDELVSDPRRATTCAGLVEAGRVTA
                     EAVLDLLGDRSLADLVEDNPDEPFAEVDRLLRVEVFAERAEALGCGAAELVRRACTSY
                     QGLSPQARGEAGREFLAPYFAACD"
     gene            complement(724..1326)
                     /locus_tag="QGG16_03090"
     CDS             complement(724..1326)
                     /locus_tag="QGG16_03090"
                     /inference="COORDINATES: protein motif:HMM:NF014997.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HJP24294.1"
                     /translation="MHRLALPCSLAGGVVLVASASGGRDRVGAAVFVMGVVLMFSASS
                     LVHLRRWSIPTWEVLFRIDHGAIFVLIAASATPIGLSALDGRSATLLLWAVWIGAAVG
                     VGVRALPFHPPKGLMNTLFIVLGWVPIVVAPDLIRALSLTELLLVVAEGLLYSGGALM
                     LGARWPDPSPEVFGYHEVWHTLVTIAVALHFVVVGLLVAG"
     gene            complement(1527..1823)
                     /locus_tag="QGG16_03095"
     CDS             complement(1527..1823)
                     /locus_tag="QGG16_03095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24295.1"
                     /translation="MSWAAILTLSGGCYLAKLTGVMAGDRFATVLAPVTTLLPAALFS
                     AIVVLMTVADDSTLVIDARLAGVAVAIVAVIRRAPFAVVVALAMLATAGIRLLN"
     gene            complement(1820..2536)
                     /locus_tag="QGG16_03100"
     CDS             complement(1820..2536)
                     /locus_tag="QGG16_03100"
                     /inference="COORDINATES: protein motif:HMM:NF015549.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HJP24296.1"
                     /translation="MNASAILLWRMPSHRRDGFLLAAACFLIGITFGVFADSSGLGLG
                     QAAALSVFTFTGASQFALLSVVAGGGTAVAAVGGALLIGARNGLYGPSIAPLLQGGRV
                     RRALSAHFVIDETTAMATAQDDPTLAREAFWTTGLWLFAFWNVGTVLGVVAGSALDDP
                     GALGLDAAFPAAFVALLVPHLRTRPGQVTALLGGAIALVATPFAAAGLPMLLAALAVP
                     VGMSLQRRAVRGRTSGGGMS"
     gene            complement(2533..3051)
                     /locus_tag="QGG16_03105"
     CDS             complement(2533..3051)
                     /locus_tag="QGG16_03105"
                     /inference="COORDINATES: protein motif:HMM:NF013607.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24297.1"
                     /translation="MTQPTVLFLCTGNAARSVMARAMFAERAPDWRAVGAGTLVLEGL
                     PMSQRTRNALADHGLADPDHRSRQFGADHENVDLVVTMEPSHVAWIRRNYPEVAGRTA
                     SLPRLVRDLPAGDAADLAARVEALALDEVEVADWEEVTDPASGEQVDFDVCAATLSNL
                     VDTLVDRLGPCR"
     gene            complement(3048..3734)
                     /locus_tag="QGG16_03110"
     CDS             complement(3048..3734)
                     /locus_tag="QGG16_03110"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HJP24298.1"
                     /translation="MTASTDDSCRPAGVDLADEIRALVADVNRLAPGVDGLLEARRLV
                     FEARQALEGPVRRRWYEVPVDEIDEDLEARLRTEAGDHSLFRGRRNPLAPPLVVSSES
                     DDDGPFVTGSVRLDRCREGPPERLHGGYLAGLFDDVLSGVPSLVDMGPAVTARLAIRY
                     RSATPLDVDLRFEARVVRHSGRRLVARARCVVPGGDRATAEAEALFVAVPAARSQEGR
                     PGEGSRRGDG"
     gene            complement(3745..4809)
                     /locus_tag="QGG16_03115"
     CDS             complement(3745..4809)
                     /locus_tag="QGG16_03115"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP24299.1"
                     /translation="MDFTLGGDRALFAETLRDILDDVCTADAVRASWNDPSGAVDGLW
                     ATLAETGVLGLAAPVAHGGLGMDEVDQVLLLEELGRAACPDPVVEHSAVAVPLLRDLA
                     STALQEEWLGRAVEGSAVLTAGSPAGDPGRPLVLAGARADLVVLVVDGALHAVPAASV
                     SGQARDSVDGSRRLTEVIVDVSADTLVSADPEAVSALWDRGSWAMAAQAVGVAQRLLD
                     LTVAYVSEREQFGRPVGVNQAVKHHCSNMAIAIEFARPMVQTAAWALSTGRMPEGTVP
                     PGATDGGPSTAASMAKALASEAVDLACRSALQCHGAIGYTIEYDLQLWLKRGWALSAS
                     WGDARRHRRRIADGLGLVSA"
     gene            complement(4820..5989)
                     /locus_tag="QGG16_03120"
     CDS             complement(4820..5989)
                     /locus_tag="QGG16_03120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP24300.1"
                     /translation="MDLDFTSSQMAFRDEVRGWLAENLPAEPLPSLDTPEGFELHREW
                     EGVLHEARWSVVAWPEAHGGRDADLVEWLLFEEEYYRSGAPGRVNTNGISLLGPTLYA
                     FGTAKQQDRFLPRMASGEEIWAQGWSEPDSGSDLASISTKAIRDGEWFVLDGQKTWCS
                     RGAWADWMFCIVRTDPDSERHRGLSYLLVPADAEGLERRPVGRLDGEPAFAELFFDGC
                     RVHESNLLGGEGEGWNVAMATTSSERGLNLRAPGRFLAAADRLADLYRELLETGSSDE
                     GLLDEVVQAWTGAQAYRWQTYRTAAHLSGGGELGAASSMGKVFWSELDVELHSTALRL
                     LGERGELVDAPPGPGLPGADWMSGYLFSLSGPIYAGTNEIQRNIIAERVLGLPRK"
     gene            complement(5995..7113)
                     /locus_tag="QGG16_03125"
     CDS             complement(5995..7113)
                     /locus_tag="QGG16_03125"
                     /EC_number="1.13.12.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016703 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of one atom of oxygen (internal
                     monooxygenases or internal mixed function oxidases)
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HJP24301.1"
                     /translation="MEWPNSDPTPADRRLHTRFCDLVGVRYPIVQTGMGWVAGSRLTA
                     ATAEAGGLGIIAAAPMTYDQMVDAIAEVRAATDEPFGVNLRTDAADVDRRVDYLIAEG
                     VRVASFAQAPGQAIVERLKEAGVVVIPTIGAARHAEKVAEWGVDAVIAQGAEGGGHTG
                     LVPTSILVPQVLDALEGSGVALVAAGGFTDGRGLAAALAWGADAVAMGTRFLLTADSD
                     VPDEVKSVYLATPVTGTVVTRAVDGAPQRVVATEVVARLERSRVLAFPRAALNALRFR
                     RLTSTPLRELLAEGLRMKRSSEMTWSQVAMAANAPMLTRATMVEGRSEVGILPTGQGV
                     GAIAELPTCAELIDRTVAEATAALDRLTGRGADPAVGE"
     gene            complement(7116..7922)
                     /locus_tag="QGG16_03130"
     CDS             complement(7116..7922)
                     /locus_tag="QGG16_03130"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HJP24302.1"
                     /translation="MADLKPDANQPEEATIDEICVVAIAEAFRGDGEILCNPIGTTPI
                     IGGRLARATFEPAMVMTDAVSVLAANPLPVGDDNAERLVEAWMPYRDMFDVVWSGRRH
                     IVMGASQIDAHGNQNLAAIGDWRRPKAQLLGLRGAPGNLVNHATTYWVPNHSTRSFVS
                     SVDVVSGPGYDRVAPLSVAIRAGYEIRRVVSNLAVMDFESSGSGDEPRRMRLRSVHPG
                     VTVDEVVEATGFELAVPDEVPESRLPTGEELHLIREVLDPRGYRKAEFGG"
     gene            complement(7924..8856)
                     /locus_tag="QGG16_03135"
     CDS             complement(7924..8856)
                     /locus_tag="QGG16_03135"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HJP24303.1"
                     /translation="MTPPSQRSYAPSTLPTPDGRPDKRMTEDDVVARLSSGMTIGIGG
                     WGSRRKPMSLVRAIARSELTDLTIVCYGGPEVGILSTLGKVRRAVYGFVSLDSIPLEP
                     HFRQARQQGTIEVTELDEGAFYLGLLAAAHRVPFYPTRAGLGSDMMLMNPDLATVTSP
                     YPDADGVHEDLVAIPAFQLDASLIHMNRADAAGNGQFLGPDLYFDDLFAKAATSTYLS
                     CEKVIATGDLLAEGSLHTLKIPRLFVDGVVESPRGAHFTECPPDYGRDEAFQRAYAAT
                     AKDPEAWRAFVDRWLEAPSHAEYLERLDAEGEGA"
     gene            8954..9760
                     /locus_tag="QGG16_03140"
     CDS             8954..9760
                     /locus_tag="QGG16_03140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJP24304.1"
                     /translation="MAPSPTPPTPSSDPLDFTGRSVVVTGGSRGLGRVIATTFLDAGA
                     DVITCARSAPDEPVTSTDGSREAAFVVADVRDPEQVADVVAATVERSGRVDVLVNNAG
                     GAPPADSATVSPRFNEKIIALNLTAPMTFCQAVHPTMSTQDGGGVIVNISSVSGTRPN
                     PLGVAYGAAKAGLENMTRTLAHEWGPAIRVVAITVGMIVTDEAAAFYGDDEGQAAVAA
                     NLPAGRLGQPDDVADICLALASPLARWVTGTCVEVHGGGEGPAYLGAARA"
     gene            9769..10281
                     /locus_tag="QGG16_03145"
     CDS             9769..10281
                     /locus_tag="QGG16_03145"
                     /inference="COORDINATES: protein motif:HMM:NF013052.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SET domain-containing protein-lysine
                     N-methyltransferase"
                     /protein_id="HJP24305.1"
                     /translation="MAPIRCWRSPKVEVRDGSVAGLGVFALEPIAAGEVVAVKAGHIV
                     DHAEVVRLTAEIGDQSLQIADDLYLSPRTATEVDETSIRINHSCDANVGFRGQVVYVA
                     MRDIAADEELCHDYGTARTDDYRLECGCGTAACRGTVTGDDWRLPAVQARYDGFFIEH
                     VAARIRQSQN"
     gene            10489..11478
                     /locus_tag="QGG16_03150"
     CDS             10489..11478
                     /locus_tag="QGG16_03150"
                     /inference="COORDINATES: protein motif:HMM:NF012955.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HJP24306.1"
                     /translation="MAPEFRYEDAPPYGEVEQLSPLVRRVVARNPSKFTYHGSGTFII
                     GPAPDANPNGNVAIIDPGPADDDHVAALLKAVEGQRVTHLLITHTHPDHSPATAAVQT
                     ATGATSYGFGPHPVEAIRAYDERVRKAIEAGEEPESEDGEGAGDRDFVPDVVTSDGDV
                     IAGEGFTFEALHTPGHISNHLCFALREEATLFAGDHVMGWSTTVVPAPDGDLNDYLAN
                     LRRLLDRPETLYRPTHGPAITDPSRYVAALIDHREMREGQIVDALVAGPRGIESIVAE
                     LYADVDEKLHKAAAAVVYAHLLALSRAGRAVAETDPEDDGGASSDWKADWRLV"
     gene            complement(11480..12256)
                     /locus_tag="QGG16_03155"
     CDS             complement(11480..12256)
                     /locus_tag="QGG16_03155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJP24307.1"
                     /translation="MDAPEYVPGHDLLADRIVVVTAAAGAGIGFAVAKKAVEEGATVV
                     ISDVHERRLDEAADALAELSGDRPVTSLCDVSDENQVQELLDAAVAAHGRIDVMVNNA
                     GLGGDTPLVEMQDDEWERVLDITLTGAMRCTRAAMRIMGEQGHGVIVNNASVLGWRAQ
                     AGQSHYAAAKAGVMALTRCAAIEGVESGIRINCVAPSFATHPFLARTSSEELLAELAA
                     SEAYGRGAEPWEVANVVVFLASDYSSYMTGEVVSVSSQRA"
     gene            complement(12288..13250)
                     /locus_tag="QGG16_03160"
     CDS             complement(12288..13250)
                     /locus_tag="QGG16_03160"
                     /inference="COORDINATES: protein motif:HMM:NF024950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJP24308.1"
                     /translation="MSLDGVAHLAGKNIAVTGAGNGIGRAIALACAAEGANVVVADYG
                     VSIEGSDPSSDVADAVVAEIVSAGGTAIAVAGDVSQMEVGQRIVDTALEAWGSIDGVV
                     CVAGIVRERMLFNMSEDEFDHVVGVHLKGHFTLYKAAAAVMRKQETGGSLVGFTSGAF
                     VASTAQANYSAAKGGIVSLTRSAAFALRKYGVNANCIAPAAMTRMSENVPFEIEAGSP
                     EAIAPLAVWLMSDAARDVTAQIYTCTGKRIAVWNQPAEIRHMWADDGASFSVDEIAEK
                     LPATIGDEEMPMFADLERRMKEMAQAKERAEKQAPGQDAPASQA"
     gene            complement(13366..>14163)
                     /locus_tag="QGG16_03165"
     CDS             complement(13366..>14163)
                     /locus_tag="QGG16_03165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020376783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJP24309.1"
                     /translation="RRREVDRMLDRDGVAALHDLTGRVAVVTGGSRGIGLAVAHAFAA
                     QGARVVVSSRKAEACGEAVASIRAAGGEAIAVPAHVGDLHDLEQLVASTVDAFGGIDV
                     LVNNAANPLAQPIGSITADAYAKSFDVNVRGPLFLFQACLPHLLESDHAAVVNVISAA
                     AFLHTPGGSLYGAAKAALLHFTRSMAAEYAQSGIRVNALAPGPTDTTMVRNTGEAGAA
                     SMARSTRLGRLAGADEMVGAVLYMASDASSFMTGQCMTVDGGLVPAR"
BASE COUNT         2385 a         5019 c         4697 g         2062 t
ORIGIN      
        1 ctcggcgccg atcatcacgg gccggccgtc aatggtcccc gatccggtga cgattccgtc
       61 ggccggagcg gcgtcgcccg ggggttcaac cagcgtgccg atctcgtgga acgagccatc
      121 gtcgagcagg tggtcgatcc gggcccgggc gtcaagtcgg tcaccaccac ccttgtcacg
      181 gtgtcgggcc agacgatcct cgccacccat ggctctggca gccgcacgcc gcccgtggag
      241 gtcgtcgagc aggggctccc aggcgtcggg gtcggtcgtc accaacccag tctcgcccag
      301 atcagtcaca ggccgcgaag tagggggcca ggaactcccg gcccgcctca ccccgggcct
      361 ggggagacag tccctgatag gaggtgcagg cccgccggac gagttccgcc gcaccacaac
      421 ccagtgcctc ggcccgctcg gcgaacacct cgacccggag gaggcggtcc acctcggcga
      481 atggctcgtc ggggttgtcc tccaccaggt cggccagcga ccggtcaccg aggaggtcga
      541 gcaccgcctc agcggtgacc cggccggctt ccaccagccc ggcgcacgtg gtggcccgcc
      601 gggggtcgga gaccagctcg tccccgcagc ccgtcaccag gccagccact gagagggcta
      661 ctgccgagag ggagaccacc acgcgcagcc gcctcgtccg ggcggcccca cggtgcgttc
      721 gggtcatccg gcgacgagga ggcccaccac cacgaagtgg agtgccaccg cgatggtcac
      781 cagcgtgtgc cagacctcgt ggtagccgaa cacctcgggc gacggatcag gccagcgggc
      841 tcccaacatc aatgcgccgc cgctgtacag gagcccctcg gcgaccacca ggagcagttc
      901 ggtgaggctc agggcacgga tcaggtcggg cgccaccacg atgggcaccc agcccaggac
      961 gatgaacaag gtgttcatga ggcccttcgg cggatgaaac ggcagcgctc ggactccgac
     1021 gccgaccgcg gcaccgatcc acaccgccca gaggagcagg gtggccgacc gaccatcgag
     1081 cgcgctcaac ccaatcggtg tggcgctggc cgcgatgaga acgaagatcg ccccgtggtc
     1141 gatgcggaac aggacctccc acgtggggat cgaccagcga cgcaggtgta cgaggctgct
     1201 ggccgagaac atcagcacga cacccatgac gaacaccgcg gcacccaccc ggtcgcgccc
     1261 ccccgaggct gaggccacca gtacgacacc tcccgccaga gagcacggca gggccaatcg
     1321 gtgcatgacc ccgcgccacc ggggtctggg caggagcaat gaccgccgca cggacgccga
     1381 gacaccggag acgtcagcgg cctccaccgg gtccgtctcc ggttccttct ttggtccgcc
     1441 cgtcacattg acgaacgtag accgacggga accacctgtc atggcaagac gccgagcgtc
     1501 gggaatcggt tccggccgcg gtccgatcag ttcaggaggc ggatccccgc ggtggccaac
     1561 atggccagtg ccactacgac cgcgaacggc gcccgacgga tgacggccac gatggccact
     1621 gccacgccgg ccaggcgggc atcgatcacc agggtggaat cgtcggccac cgtcatgagc
     1681 acgacgatgg ccgagaagag ggcagccggc aacagcgtcg tcaccggcgc cagcaccgtg
     1741 gcgaagcggt cccccgccat caccccggtc aacttggcga ggtagcaccc tccagacagg
     1801 gtcaggatgg ccgcccaact cacgacatgc ctccgccgct cgtccggcca cggaccgccc
     1861 gtcgctgcaa cgacattccg acggggacgg ccaacgcggc gaggagcatg ggcagccccg
     1921 ctgcagcgaa cggtgtggcc accagcgcga tggcacctcc caatagggcg gtgacctgac
     1981 ccgggcgagt ccgcagatgc gggaccagca acgccacgaa ggctgctggg aatgctgcgt
     2041 ccagaccgag tgcccccgga tcgtccaacg cactgccggc caccacgccc agcaccgtcc
     2101 cgacattcca gaaggcgaac agccagagac cggtggtcca gaaggcctcc cgggccagcg
     2161 tcgggtcatc ctgcgcggtg gccatggccg tggtctcgtc gataacgaag tgggccgaca
     2221 aggcccggcg gacacgccca ccttgaagca gcggagcgat cgacggtccg tacaggccat
     2281 tacgggcgcc gatcagcagg gcacctccca ccgcggcgac cgccgtccct ccaccggcca
     2341 ccaccgagag gagggcgaac tgcgaagccc cggtgaaggt gaagaccgaa agcgccgcgg
     2401 cctggccgag ccccaggccc gaggagtcgg caaacacgcc gaaagtgatg ccgatcagga
     2461 agcaggccgc agccagcagg aagccgtccc gccggtggga cggcatacgc cacaggagga
     2521 tcgccgaggc gttcaacggc aggggcccag gcgatccacc agggtgtcga cgaggttgct
     2581 gagcgttgcc gcgcagacat cgaagtcgac ctgttcacct gacgcaggat cggtgacctc
     2641 ttcccagtcg gcgacctcca cctcgtccag ggccaacgcc tccacccggg ccgccaagtc
     2701 ggccgcgtcg cccgctggaa ggtcacgaac cagtcggggc aacgatgccg tccgcccagc
     2761 cacctcgggg tagttccggc gaatccaggc cacgtgcgag ggctccatgg tcaccacgag
     2821 gtccacattc tcgtggtcgg cgccgaactg tcgactgcgg tgatcagggt cagccagacc
     2881 atggtcggcc agcgcgttac gggtccgctg gctcatggga agcccctcga gcaccagcgt
     2941 gcccgcaccc acggcccgcc agtcgggggc ccgctcggcg aacatcgccc gggccatgac
     3001 cgaccgggca gcgttgcccg tgcacaggaa caggacggtg ggttgggtca cccgtccccc
     3061 cggcggctgc cctccccagg acgcccttcc tgagagcggg ccgccggcac agccacgaag
     3121 agcgcctcgg cttcggccgt cgcccggtcc ccaccgggga ctacacagcg tgcacgagcc
     3181 accaggcgcc gtccggaatg acgaaccacc cgagcctcga accggaggtc gacgtcgagc
     3241 ggcgtggcgc ttcggtaacg gatagccagt cgggctgtga ccgctggccc catgtcaacg
     3301 agcgatggga cgccgctcag cacgtcatcg aacaggccag ccagataacc accgtggagg
     3361 cgttccggtg gcccctcccg gcatcggtcg agacggaccg agcccgtcac gaaagggccg
     3421 tcatcgtcgg actcgctgga caccaccagc ggcggcgcca aggggttgcg gcgaccccgg
     3481 aagagactgt ggtcgcccgc ctcggtccgc aaccgggctt ccaagtcctc gtcgatctca
     3541 tcgactggaa cctcgtacca gcggcggcgc accggacctt cgagtgcctg tcgggcctcg
     3601 aacaccagcc gacgagcctc caaaaggccg tcgacaccgg gagcgaggcg attcacatcg
     3661 gcgaccagag cgcgtatctc gtcggccagg tcgacaccgg ccggccggca ggaatcatca
     3721 gtcgacgccg tcatcgctgg gccatcatgc cgagaccagt cccagaccgt cggcgatgcg
     3781 acgacggtgg cgacgggcat cgccccacga cgcggacagg gcccatcccc gcttcaacca
     3841 gagctgcagg tcgtattcga tcgtgtagcc gatggctccg tggcactgca gcgccgagcg
     3901 gcaggcgagg tcgacggctt ccgatgccag ggccttggcc atggacgccg ctgtcgacgg
     3961 accgccgtcg gtggcccccg gcggcacagt cccttccggc atccgaccgg tggaaagtgc
     4021 ccaagccgcc gtctggacca tggggcgggc gaactcgatg gcgatagcca tgttcgaaca
     4081 gtggtgcttc acggcctggt tcactccgac cggtcgaccg aactgctccc gttcggacac
     4141 gtaggccacc gtcaggtcga gcagccgctg ggccaccccg acggcctgag ccgccatggc
     4201 ccacgaaccc cggtcccaca gcgcggacac ggcctcggga tcggcggata ccagggtgtc
     4261 ggccgatacg tccacgatga cctcggtcag gcgtcgggag ccatcgacgc tgtcgcgggc
     4321 ctgacccgag accgaggcgg ccggtacagc gtggagcgcc ccgtccacga cgagtaccac
     4381 caggtctgcc cgagcgccag ccagcaccag aggccgccct gggtcgccag ccggcgagcc
     4441 ggcggtgagc accgccgaac cctcgacggc ccggcccagc cactcctcct gcagggcggt
     4501 agatgccagg tcacggagca acggcacggc gaccgccgag tgttcgacca ccgggtccgg
     4561 gcaggccgcc cgacccagtt cctcgagcag gagcacctgg tcgacctcgt ccatccccag
     4621 accaccatgg gctacgggcg cggcgagtcc caggacgcca gtctcggcca atgtcgccca
     4681 gagaccgtcg acggcccccg acgggtcatt ccacgaggcc cgcacggcgt ccgcggtgca
     4741 gacgtcgtcg agaatgtcgc gcagggtctc cgcgaatagc gcccggtccc cgcccagtgt
     4801 gaagtccata gtggtgccgc tacttccgag ggaggccgag cacccgctca gcgatgatgt
     4861 tgcgctggat ctcgttggtg ccggcgtaga tcggacccga caagctgaac aggtaacccg
     4921 acatccagtc ggcccccggc aatccgggtc cgggcggagc gtcgaccagc tcgccgcgct
     4981 caccgagcag gcgcagcgca gtggagtgca actcgacgtc caactcggac cagaagacct
     5041 tgcccatcga cgatgccgca cccagttcac caccgcccga caggtgggcg gctgtgcggt
     5101 acgtctgcca ccggtaggcc tgtgcgccgg tccatgcctg gactacctcg tccagcaggc
     5161 cctcgtcgga agatcctgtc tccaacaact cacggtagag gtcggccaga cggtccgctg
     5221 cggccaggaa ccggccgggc gcccggaggt tcaggccccg ctcgctggac gtggtggcca
     5281 tggcgacgtt ccagccctcg ccctcgccgc ccaggaggtt cgactcgtgc acccggcacc
     5341 cgtcgaagaa cagttcggcg aatgccggct cgccgtcgag acgaccaacc ggacgccgct
     5401 cgaggccctc ggcgtcggct ggcaccaaca ggtacgagag cccgcggtgg cgttcggagt
     5461 cggggtcggt ccgcacgatg cagaacatcc aatcggccca tgcgccacgc gaacaccacg
     5521 tcttctggcc gtccagcacg aaccactcgc cgtcgcggat ggcctttgtg gatatggacg
     5581 ccaggtcgct tcccgagtcg ggttcggacc agccctgggc ccagatctcc tctccagagg
     5641 ccatccgggg aaggaagcgg tcctgttgtt tcgccgtccc gaaggcgtac agggtcggtc
     5701 ccaggaggct gatcccgttg gtgttgaccc ggcccggtgc acccgaccgg tagtactcct
     5761 cttcgaacag cagccactcc acgaggtcgg cgtcccggcc gccgtgcgcc tcgggccagg
     5821 ccaccaccga ccagcgagcc tcgtgcagca cgccttccca ttcacggtgg agctcgaatc
     5881 cctcgggggt gtccagggag ggaagcggct cggcggggag gttctcggct agccagcccc
     5941 gcacctcgtc acggaaagcc atctggctgg atgtgaagtc gaggtccatg gcggtcactc
     6001 ccccacagcc gggtccgctc cccggccggt caaccgatca agggccgctg tggcctcggc
     6061 caccgtgcgg tcgatcaact cggcacacgt cgggagttcg gcaatggcgc ccactccctg
     6121 accggtcggg aggatcccca cctcggagcg accctcgacc atggtggccc gggtcagcat
     6181 cggggcgttg gcggccatgg ccacctggct ccacgtcatc tccgaagatc gcttcatgcg
     6241 cagcccctcg gccagtagct cgcgtagagg ggtggacgtc agtcgtcgaa accggagggc
     6301 gttcagggct gcccggggga aggccagcac gcgggaccgc tccagtcggg ccaccacctc
     6361 ggtggccacc acccgttgcg gcgcaccgtc gacggcccgg gtgaccaccg tgccggtgac
     6421 cggcgtggcc aggtacacgg acttgacctc gtcggggacg tcgctgtcgg cagtgagcag
     6481 gaaacgggtg cccatggcca ccgcgtctgc accccaggcc agggcggcag ccaggccgcg
     6541 cccgtcggtg aacccaccgg cggccaccag ggccacgccg ctgccctcta gggcatcgag
     6601 cacctggggg acgaggatcg aggtgggcac cagaccggta tgtccaccgc cctcggcgcc
     6661 ctgggcaatc accgcgtcca caccccattc ggcgaccttt tcggcgtggc gggccgcgcc
     6721 gatggtcggg atgacgacca ccccggcctc cttgaggcgt tccacgatgg cctgccccgg
     6781 ggcctgggca aacgaggcca cccgcactcc ttcagcgatc aggtaatcga cccgtcgatc
     6841 cacgtcggcg gcgtcggtcc gaaggttcac cccgaacggt tcgtcggtgg cggcacggac
     6901 ctcggcaatg gcgtcgacca tctggtcgta cgtcatgggg gctgcggcga tgatccccag
     6961 cccgccggcc tccgcagtgg ccgccgtcag ccgtgagccg gccacccagc ccatgcccgt
     7021 ctggacgatc ggataccgaa caccaaccag gtcgcagaac cgggtgtgga ggcgccggtc
     7081 agccggcgtg ggatccgagt tcggccactc catggtcaac cgccgaactc ggccttgcgg
     7141 tagccccggg ggtcgagcac ctcacggatg aggtggagtt cctcgccggt cggcagtcga
     7201 ctctcgggga cctcgtcggg cacggccagc tcgaagccgg tggcctcgac cacctcatcg
     7261 accgtcacgc cgggatgcac cgatcgcagc cgcatccggc ggggctcatc gcctgatccg
     7321 ctggattcga agtccatcac ggccaggttg gacaccaccc ggcggatctc gtaaccggcc
     7381 cggatggcta ccgacagggg tgccacccgg tcatagcccg gacccgacac cacgtccacg
     7441 gaggacacga acgatcgggt cgagtggttg ggaacccagt aggtggtggc gtggttgacc
     7501 aggttgcccg gtgcgccacg caggcccagg agttgagcct tgggccgtcg ccagtcgccg
     7561 atggccgcca ggttctggtt gccgtgggca tcgatctggc tggcgcccat gactatgtgg
     7621 cggcgacctg accagaccac gtcgaacatg tcgcggtagg gcatccaggc ctcgaccagg
     7681 cgttcggcgt tgtcgtcacc caccggcaac gggttggcgg ccagcactga cacggcgtcg
     7741 gtcatcacca tggccggttc gaaggtggct ctggccagtc gtccaccgat gatcggcgtg
     7801 gtgccgatcg ggttgcagag gatctcgccg tcaccacgaa aggcctcggc aatggccacc
     7861 acacagatct cgtcgatggt cgcctcttct ggctggttgg cgtcgggctt gaggtcggcc
     7921 atctcaggcc ccctccccct cggcatcgag ccgctcgagg tactcggcgt ggctgggcgc
     7981 ctccaaccag cgatccacga aggcccgcca cgcctcggga tccttggcgg tggccgcgta
     8041 cgcccgctgg aatgcctcgt cgcgcccgta gtcgggtggg cattcggtga agtgggcgcc
     8101 ccggggcgac tcgacgacgc cgtccacgaa gagccggggg atcttgaggg tgtggaggga
     8161 tccctcggcg agcaggtcgc cggttgcgat caccttctcg cacgacaggt aggtggacgt
     8221 cgccgccttg gcgaacaggt catcgaagta gaggtcggga ccgaggaact ggccgtttcc
     8281 ggctgcatcg gcccggttca tgtggatcag ggaggcatcc aactggaagg ccggaatggc
     8341 caccaggtcc tcgtggacac cgtcggcgtc cggatagggc gaggtgacgg tggccagatc
     8401 ggggttcatc agcatcatgt cgctgcccag tccggcccgt gtcggataaa agggcacccg
     8461 atgggcggcc gccaggaggc cgaggtagaa ggctccctcg tccagttccg tgacctcgat
     8521 ggttccctgc tgacgggcct ggcggaagtg tggttccaac ggaatggagt cgagcgacac
     8581 aaagccgtag acggcccgcc ggaccttgcc gagtgtcgag aggatcccta cctcggggcc
     8641 gccgtagcag acgatggtca ggtcggtgag ttcgctgcgg gcgatggccc ggaccagcga
     8701 catgggcttg cggcgtgagc cccagcctcc gatgccgatg gtcataccgc tggacagccg
     8761 ggcgacgacg tcatcctcgg tcatccgctt gtccgggcgc ccgtcggggg tgggaagcgt
     8821 cgagggtgca taagagcgtt ggctgggagg agtcacccgg ccaacggtag gcgagtcggg
     8881 accgccacgg aaaccctgac ggtccgtcag attgtgtgat ccgtcacgac agccggcggt
     8941 tagcgtgcgt tccgtggccc cctcgccgac ccctccgacc ccatcgtcag acccgctgga
     9001 cttcaccggt cggtcggtgg tggtcaccgg tgggtcacgg ggcctgggtc gcgtgatcgc
     9061 caccaccttc ctcgacgccg gagctgacgt catcacctgc gcgaggagtg cgcctgacga
     9121 gcccgtcacc tcgacagacg gatcccggga ggccgctttc gtggtggcag acgtacgcga
     9181 tccggagcag gtggccgatg tagtggccgc gactgtggag cggtcgggac gagtcgatgt
     9241 gctggtcaac aacgctggtg gcgcaccacc ggccgattcg gccaccgtgt caccccgctt
     9301 caacgagaag atcatcgcgc tgaacctcac agcgcccatg acgttctgcc aggccgtgca
     9361 ccccacgatg tcgacccagg acggcggtgg agtgatcgtc aacatctcgt cggtgagtgg
     9421 gacgcgaccc aacccactcg gcgtggccta cggggcggcc aaggccggtc ttgagaacat
     9481 gacccggacg ctggcccatg agtgggggcc ggccatccgg gtggtggcca tcactgtcgg
     9541 gatgatcgtc accgacgaag ccgccgcctt ctacggtgac gacgaggggc aggccgcagt
     9601 ggccgccaac ctccctgccg gtcggctggg ccagccagac gatgtggccg acatctgcct
     9661 cgccctggct tcaccattgg cccggtgggt caccggcacc tgcgtggagg ttcacggcgg
     9721 gggcgagggc ccggcctatc tgggcgcagc gcgcgcctga ccggacccgt ggctcccatc
     9781 cgctgttggc gttcgcccaa ggttgaggtc cgcgacggat cggtggccgg cctcggggtg
     9841 tttgcccttg aaccgattgc cgccggggag gtcgtggccg taaaggccgg ccacatcgtc
     9901 gaccacgctg aggtggttcg cctcactgcc gagatcggcg accagagcct tcagatcgcc
     9961 gacgacctct acctgtcgcc ccgtacagcc accgaggtgg acgagacgtc cattcgaatt
    10021 aaccactcgt gtgacgccaa cgtcggcttc cgtggccagg tggtctacgt ggccatgcgc
    10081 gatatcgcgg ccgacgagga actgtgtcat gactacggca cggcccggac cgacgactac
    10141 cgcctggagt gtggctgcgg gacggcggcg tgtcgaggca ccgtcaccgg cgacgactgg
    10201 cggctccctg ccgtccaggc caggtacgac gggttcttca tagagcacgt ggccgccaga
    10261 atccgccaaa gccagaactg acgacccatt tccctagcgg cccggctctt cgccgatctc
    10321 ggccagggcg tcaccggtcc atacgcggcc gaaatcggcg agtccgggcg cgccacctga
    10381 tcgggttcct gaaccacgcc cgctgaacct cggtttccgg gacgtcaacc aggccaccgg
    10441 ctgggacaga agttcgcgac ggggacgtcc atcgggcagg atgccgccat ggcccctgag
    10501 ttccggtacg aggacgcccc gccctacggg gaggtggagc agctctcgcc gctcgtgcgt
    10561 cgggtggtgg cccgtaaccc gtcgaagttc acctaccacg gatcgggcac gttcatcatt
    10621 gggcccgcac cggacgccaa cccgaacggg aacgtcgcca tcatcgatcc ggggccagcc
    10681 gacgacgacc atgtggcggc cctcctgaag gccgtcgagg gccagcgggt cacccacctg
    10741 ctcattaccc acacccaccc ggaccactcc ccagccaccg ccgccgtgca gacggccacc
    10801 ggggccacct cgtacggttt cggcccccac ccggtggaag ccatccgcgc ttacgacgaa
    10861 cgggtccgaa aggccatcga ggccggcgag gaacccgagt ccgaggatgg agagggcgca
    10921 ggcgaccggg acttcgtgcc cgacgtggtc acctccgacg gcgacgtcat cgccggcgaa
    10981 gggttcactt tcgaggcgct tcacaccccg ggccacatct cgaaccacct gtgcttcgcc
    11041 ctccgggagg aagcgaccct gtttgctggc gatcacgtca tgggttggtc gaccaccgtg
    11101 gtcccggcac ccgacggcga tctgaacgac tacctagcca acctccgtcg gctgctggac
    11161 cgccccgaga ccctctaccg acccacccac ggaccggcca tcactgaccc gagccgttac
    11221 gttgcggcgc tgatcgacca tcgggagatg cgtgagggcc agattgtcga tgccctcgtc
    11281 gccggccccc gggggatcga gtcgatcgtc gccgagctct acgcggatgt ggatgaaaag
    11341 ctccacaagg cggcagcggc cgtggtgtac gcccacctcc tcgccctatc ccgggcaggt
    11401 cgggcagttg ctgagactga tccggaagac gacggtggtg ccagctcgga ctggaaggct
    11461 gactggcgcc tggtctgaat caggcgcgct ggctggagac cgacacgacc tcgccggtca
    11521 tgtaagacga gtagtcgctg gccaggaaga caaccacgtt ggctacctcc cacggctcgg
    11581 cgccccgccc ataggcctcg ctggcggcca gctcggcgag cagttcctcg ctgctcgtcc
    11641 gggccaggaa cgggtgggtg gcaaagctgg gggccacgca gttgatccgg atgcctgact
    11701 cgacgccctc gatggccgcg caccgggtga gggccatcac cccagccttg gcggccgcgt
    11761 agtggctctg gcccgcctgg gcccgccagc ccagcaccga ggcgttgttc acgatcacac
    11821 cgtggccctg ttcacccatg atccgcatgg ccgcccgggt gcagcgcatc gctccggtga
    11881 gggtgatgtc caggacccgt tcccactcgt catcctgcat ctcgaccagc ggggtgtcac
    11941 cgccgagacc ggcgttgttg accatgacgt caatacggcc gtgtgcggcc acggcggcgt
    12001 ccaacagttc ctgcacctgg ttctcgtcac tgacgtcaca caggctggtg accggacggt
    12061 caccggacag ttcggccaac gcatcggccg cctcgtccag gcgccgctcg tggacatcgg
    12121 agatgacgac ggtcgccccc tcctccacgg ccttcttcgc cacggcgaat ccgatcccgg
    12181 cgccggccgc cgcggtgacc acgacgatcc gatcggccaa caggtcatgg ccgggtacat
    12241 actcaggagc atccatggca ggaggctaga tccggcgact ggcgcgatca ggcctgggag
    12301 gccggagcat cctgtccagg ggcctgtttc tcggcccgtt ccttggcctg agccatctcc
    12361 ttcatgcgcc gctccagatc ggcgaacatc ggcatctcct cgtcgccaat ggtggcgggg
    12421 agcttctcgg cgatctcgtc gacgctgaaa gatgcaccat catcagccca catgtggcgg
    12481 atctcggcgg gctgattcca cacggcgatg cgcttaccgg tacaggtgta gatctgggcc
    12541 gtcacgtcac gagctgcgtc cgacatgagc cagacagcca gcggggcaat ggcttcgggg
    12601 ctgccagcct cgatctcgaa cggcacgttt tccgacatgc gggtcatggc cgctggggcg
    12661 atgcagttcg cgttcacgcc gtacttccgg agggcgaagg ccgcactccg agtcagcgag
    12721 acgatgccgc ccttagccgc cgagtagttg gcctgggccg tcgatgccac gaaggctccc
    12781 gacgtgaagc cgacgaggct gcctccggtc tcctgctttc gcatgaccgc cgcggccgcc
    12841 ttgtagagcg tgaagtggcc cttgagatgg acaccgacca cgtggtcgaa ctcatcctcg
    12901 ctcatgttga acagcatccg ctcgcgcacg atgccggcca cgcagaccac cccgtcgatg
    12961 ctgccccagg cctccaacgc cgtatcgacg atccgctggc cgacctccat ctgggaaacg
    13021 tcgcccgcca cagcgatggc cgtgccaccc gccgagacga tctctgccac gacggcatca
    13081 gcgacgtcgc tggacgggtc gctcccctca atagagacgc cgtagtcggc taccaccacg
    13141 tttgcaccct cggcggcaca ggccagggcg atggcccgac cgatcccgtt gccggcaccg
    13201 gtgacggcga tgttctttcc tgcgaggtgg gcgacgccgt ccagtgacat gggtactccg
    13261 agggctcatg gaccatctca ttcctgacgg tccgtcagat tcggtcgcca ccctaccgag
    13321 ggtcggcggc ggtgtgttca gcgggccaac ctcagcgggc acgtctcagc gggcgggcac
    13381 cagtccacca tcgacggtca tgcactgccc ggtcatgaag ctcgatgcgt cggacgccat
    13441 gtagagcacg gcgcccacca tctcgtcggc acctgccaga cggcccagtc gggtcgagcg
    13501 ggccatggac gccgcccccg cctcgccggt gttgcggacc attgtcgtgt cggtcggccc
    13561 gggggccagc gcgttgaccc tgattcccga ctgggcatac tcggcggcca tcgaccgcgt
    13621 gaagtgcagc agtgccgcct tggctgcccc gtacaacgac ccccccggag tgtgcaagaa
    13681 ggcggccgca gagatcacgt tgaccacagc ggcatggtcc gattccagca ggtggggcag
    13741 gcaggcctgg aacaggaaca gcggcccccg gacgttgacg tcgaacgact tggcgtaggc
    13801 gtccgcagtg atcgatccga tgggctgggc caacgggttg gctgcgttgt tgaccagcac
    13861 gtcgatccct ccgaaggcgt ccaccgtgct agcgaccagt tgctccaggt catgaaggtc
    13921 ccctacatgg gcgggtacgg cgatcgcctc acccccggcg gcacggatgg aggccaccgc
    13981 ctcgccacaa gcctcagcct tccggctaga caccaccacc cgggcaccct gggccgcgaa
    14041 ggcatgggcc acggcgagcc cgatgccccg acttcccccc gtcaccacgg ccactcgacc
    14101 cgtcaggtcg tgcagcgctg ccaccccatc ccgatccaac atcctgtcga cctctctcct
    14161 acg
//
LOCUS       DASCMR010000130         1646 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000627796, whole genome shotgun sequence.
ACCESSION   DASCMR010000130 DASCMR010000000
VERSION     DASCMR010000130.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1646)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1646)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1646
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000627796"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..511
                     /locus_tag="QGG16_03170"
     CDS             <1..511
                     /locus_tag="QGG16_03170"
                     /inference="COORDINATES: protein motif:HMM:NF013768.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HrcA family transcriptional regulator"
                     /protein_id="HJP24310.1"
                     /translation="GPSEDPSEATLAIAAAHLSAALIGHSLSAVPDTPVTGDDKVDAV
                     LTVVSRILEARTESADRAFVGGTSRVAAAFGEVERVRQVLDVLERQFIVVTMIRDVID
                     RGMSVAIGTETGIEPLADCSLVVAPYEIDGEAAGSIGVLGPTRMDYSQALATVAVVGR
                     RLGDRLTEG"
     gene            528..>1646
                     /locus_tag="QGG16_03175"
     CDS             528..>1646
                     /locus_tag="QGG16_03175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020376977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HJP24311.1"
                     /translation="MTDRDPYDVLGVPRDATSDEIKKSYRRLAREHHPDANHGGNAGA
                     AEAEFKAVAAAYEVLSDPERRDRFDRFGHTGSAGPGDPFAGFGDIFESFFGNSGFGGS
                     GSPFGGGGFGGGGRRHAGPVSGEDLETVLEVDFEEAVFGSDAEVSVRTAVVCEDCEAT
                     GAAPGSSPETCSGCGGAGQVQRVRQSMLGQMVTSTACPTCSGRGQVIANPCGSCGGEG
                     RSVEERSFTVQVRAGVDHGTTLRLTGRGAVGPRGGPAGDLYVRIQVRPHPIFERHGVD
                     LLHRLHLPMTQAGLGVILDYETLDGVEELAIPRGTPTGEVFRFRGRGVPHLQGRGRGD
                     LVVEVHVDTPTELSEEAEALLRALADERGEVVADADGGL"
BASE COUNT          260 a          506 c          596 g          284 t
ORIGIN      
        1 cggtccgtca gaggatccgt cggaagccac gctggccata gcggcggctc acctgtcagc
       61 ggccctcatc ggccacagcc tgtcggcggt ccccgatacg ccggtgaccg gcgacgacaa
      121 agtcgacgcg gtgctcaccg tggtcagccg aatcctcgaa gcacgcaccg agtcggcaga
      181 tcgggccttt gtgggcggga cgtcccgggt ggccgcggcg ttcggcgaag tcgagcgggt
      241 acgtcaagta ctggacgtat tggaacgcca gttcatcgtg gtgacgatga tccgtgacgt
      301 gattgaccgc ggtatgagcg tggcgatcgg caccgagacg gggatcgaac ctctggccga
      361 ctgttcgctg gtcgtggcgc cctatgagat cgacggtgag gccgccgggt cgatcggcgt
      421 gctcggcccg acccgcatgg actactcgca ggccctcgcc accgtggccg tcgtcggacg
      481 gcgcctcggc gaccgtctca cagaaggctg agcgggagac accggagatg accgaccgcg
      541 atccgtacga cgttttaggt gtcccccggg acgccacgtc cgacgagatc aagaagtcgt
      601 atagacgact ggcccgtgaa caccaccccg acgccaacca cggcggcaat gccggtgcgg
      661 ctgaagcgga attcaaggca gtggccgctg cctacgaggt gctgtccgac cccgaacgtc
      721 gtgaccggtt cgaccgcttc ggacataccg ggtccgcagg ccccggcgat ccgttcgccg
      781 gtttcggcga catcttcgag tccttcttcg gaaactcggg cttcggtgga tccggatccc
      841 cgttcggcgg cggtggcttc ggtggaggag gacgacgtca tgccggcccg gtttccggcg
      901 aggatctgga gacagttctc gaggtcgact tcgaggaggc ggtgttcggt tccgacgccg
      961 aggtctcggt gcggacggcc gtggtctgcg aggactgtga agccaccggt gccgcgcccg
     1021 gctccagtcc tgagacgtgt agtggatgcg gtggtgccgg tcaggtccaa cgggttcgtc
     1081 agtcgatgct gggccagatg gtcaccagta cggcctgtcc gacgtgttcg ggtcgtggac
     1141 aggtcatcgc gaacccgtgc gggagttgcg gcggcgaggg tcggagcgtc gaagagcgct
     1201 ccttcaccgt ccaggttcga gccggcgtcg accacgggac gacccttcgc ctgacgggac
     1261 gcggtgccgt ggggccacgg ggtggaccgg ccggcgatct ctacgttcgg atacaggtgc
     1321 gaccccatcc gatttttgaa cgccacggcg tcgatcttct tcaccggttg catctgccga
     1381 tgacacaggc gggcctaggg gtgatcctgg actatgagac cctggacggc gtcgaggagc
     1441 tggccattcc gcgcgggacg ccgaccggtg aagtgttccg gttcaggggt cggggagttc
     1501 cccacctgca gggacgtggt cgtggtgacc tggtggtcga ggtgcacgtc gacacgccga
     1561 ccgaactcag cgaagaggcc gaggctctcc tgagggctct ggctgacgag cggggcgagg
     1621 tggtagccga cgccgatggg ggcctc
//
LOCUS       DASCMR010000131        10491 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000633998, whole genome shotgun sequence.
ACCESSION   DASCMR010000131 DASCMR010000000
VERSION     DASCMR010000131.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 10491)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10491)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10491
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000633998"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            177..1874
                     /gene="ettA"
                     /locus_tag="QGG16_03180"
     CDS             177..1874
                     /gene="ettA"
                     /locus_tag="QGG16_03180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0045900 - negative regulation of
                     translational elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HJP24312.1"
                     /translation="MSAQFIFTMHRVGRFHPPDRDVLKDISLSFYPGAKIGVLGANGA
                     GKSSLLRIMAGIDDGFTGEARLTDGFTVGLLEQEPMLDASQDVQGNVMDGVGAVADLL
                     TRYEEVLAGWADADADYDKLGADQAELEKKIEAAGAWDLQRTIEIAMDALRLPPGDAA
                     IDSLSGGERRRVALCRLLLSRPDLLLLDEPTNHLDAESVAWLERTLRDYQGTVVAITH
                     DRYFLDNVAGWILELDRGRGIPYEGNYSGWLEQKQARLSSEEKVDSARKRTIERELEW
                     VRMAPKARQSKGKARLSAYDRLVAEAAETETRARELQIDIPANQRLGDQVIEVDHLSK
                     GFDDRLLIDDLSFSLPPAGIVGVIGGNGAGKTTLFRMLTAAADGNAEGATAPDGGAIR
                     IGPTVEIGYVDQSRDSLDAERTVYQEITDDREFIELGRREVNGRAYVSSFNFKGSDQQ
                     KKVGDLSGGERNRVHLAKVLRSGANVLLLDEPTNDLDVDTLRALESGLDAYAGCAVVI
                     SHDRWFLDRVATHVLAFEGDSQVRWFEGNFTEYESYRKKELGLDDQPHRMKYKPLVR"
     gene            1885..2232
                     /locus_tag="QGG16_03185"
     CDS             1885..2232
                     /locus_tag="QGG16_03185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24313.1"
                     /translation="MSRADARTRLLAPDTVRAAALVLCVIGIAGMIVTSIADRIDAAL
                     TFGFVGAVGALTLLLVGVLVPVVEAATSLDEQRAAEVEASVQRLMAAGADEGDLRATV
                     RAAVELGRRSAGD"
     gene            2236..3018
                     /locus_tag="QGG16_03190"
     CDS             2236..3018
                     /locus_tag="QGG16_03190"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HJP24314.1"
                     /translation="MVTPEDHQLAADLATRAGEVLLDIRARMVADGAPAAVLKHEGDQ
                     RSHEFLMEALAEVRPDDAVLSEEGTAHDCHPRRGTTSRTWIIDPVDGTREYSEPPRTD
                     WAVHVALAVDGQPVVGAVALPALGCTLATGQPPAATDLPPISARPRMVVSRSRPPDEA
                     LAVCNALGGVLVEMGSAGAKAMAVVRGEVDCYVHAGGQFEWDNCAPTAVALAAGLHAS
                     RIDGSPLTYDHPDPYLPDLVICRTELADAVLAALATPPAPEA"
     gene            3029..3736
                     /gene="nucS"
                     /locus_tag="QGG16_03195"
     CDS             3029..3736
                     /gene="nucS"
                     /locus_tag="QGG16_03195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease NucS"
                     /protein_id="HJP24315.1"
                     /translation="MHVVIARCTVDYDGRLTAHLPEAVRLLMVKADGCVAVHADGGAY
                     KPLNWMNAPNTLTIDEAGGKAGNAAADQHATAQIWHVRSPKGEHLTITVHEVLAEMDH
                     EMGIDPGLVKDGVEAHLQELLAADPTSIYKGLRLVRREFPTDIGPVDLLCRDTDGGAV
                     AIEVKRRGDIDGVEQLTRYLDFLNRDPMLRPVRGVFVAQEIKPQARVLATDRGIGCVV
                     VDYDELRGIESDEMKLF"
     gene            3756..4997
                     /locus_tag="QGG16_03200"
     CDS             3756..4997
                     /locus_tag="QGG16_03200"
                     /inference="COORDINATES: protein motif:HMM:TIGR02032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045550 - geranylgeranyl reductase
                     activity [Evidence IEA];
                     GO_process: GO:0015995 - chlorophyll biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0030494 - bacteriochlorophyll biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="geranylgeranyl reductase family protein"
                     /protein_id="HJP24316.1"
                     /translation="MTDAPTRTVDVLVVGGGPAGSAAAITAARAGQMVLLVDKASFPR
                     DKCCGDGLTTLALRLGEQLGLDPNPIGGWQPVDDAVIHSPSGRSVRFPLPRDDGRYAA
                     VVPRREYDAALLDLARTAGTEVLEGHAVTGLSLDAGNGLGNRTGATVHVDGLGSVRAT
                     TVVAADGMWSPIRRFLGLSTGDDRGQWHAFRQYVSDVGPAAADLHVWFESDLLPGYAW
                     SFPLPGGRANVGFGILRGGPVAVGDTGQIWGGLMDRPPIRAVLGDHAQPEGRRTAWPI
                     PARVDRAVLVHGPVLFVGDAAAATDALTGEGIGQALLTGILAAEASSAGGSTMEVAAT
                     YRRAVRRNLVADHRMSMALQRVLAHRVGARTAVRLADLTPWTRRNFSRWMFEDYPRAL
                     LATPRRWGRGVLSTSGAYAGH"
     gene            5042..5656
                     /locus_tag="QGG16_03205"
     CDS             5042..5656
                     /locus_tag="QGG16_03205"
                     /inference="COORDINATES: protein motif:HMM:NF013718.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HJP24317.1"
                     /translation="MEPADVGSVDELDGLTDDLTDNPSEPADQHPLGPLGASLDHAVD
                     KAWNRLRGNPTLDRVFYTASELGDFSLIWHLLGTARGVTSRRGSREATRLALALGAES
                     ALVNGAIKSAFRRERPAHDGERPHGLRQPITSSFPSGHASAAFMAATLLSERSRVKPA
                     WYGLAAIVAASRIHVRIHHASDVVVGAGIGLGLGRVIQKVFPLR"
     gene            complement(5696..5881)
                     /locus_tag="QGG16_03210"
     CDS             complement(5696..5881)
                     /locus_tag="QGG16_03210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24318.1"
                     /translation="MAVTETLDNTTIDEIRAIIDRGLGTTQSRELMAASEVADLLLDL
                     RLLLATSDAELEAAPTN"
     gene            complement(5939..6931)
                     /locus_tag="QGG16_03215"
     CDS             complement(5939..6931)
                     /locus_tag="QGG16_03215"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HJP24319.1"
                     /translation="MTGGSRYGMTVPFAGPLAGQADRFRALVEQGYTDAWTAEADGHD
                     GLAPLALASIWAPELRLGTAILPAFTRGPALLAQSAASMASAAPGRFVLGLGTSSNVI
                     VERWNGIGFEAPYARVRDTVRFLRAAFTGEKVTESYESFDIAGFRLGNVPDEAPPIVV
                     AALREGMLRLAGREADGAVVNWLSVDDTTTVTTIVRDAAAAAGRPEPEVAARLFVCPS
                     PDRDAVVVQAKRLIAAYVNVPVYRAFHEWMGRSDVLGEHWERWDAGDRSASLDAMPDS
                     VVDDLLVHGSPDQCRTHIDRYVAAGITTPVLSIVPLAGVDVDDAIRDLAPGRNR"
     gene            complement(6928..7743)
                     /locus_tag="QGG16_03220"
     CDS             complement(6928..7743)
                     /locus_tag="QGG16_03220"
                     /inference="COORDINATES: protein motif:HMM:NF025008.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HJP24320.1"
                     /translation="MSPRSYLSEELVRGDRPGTWVLPLTEDECSSAGRLFGGTGLGAA
                     VRALELDAGRPLVWATGQFISHALPGELLTFEVEMLAEGRATTQARARGHVDGREVIA
                     VVATLGRRDVERSGVWVVPPDALPPMDCPAFPSRSATRSVSANLERRLVRGRTEANEP
                     AMDDGQVAMWVRVPDHLVVDPAFLAVLGDYVPWGGRDAVGGGLGGGQSLDNTLRVVDP
                     VDTDWILVDVRISSLVHGYAHGTVHLWSEDGHLLATASQTCQFRNPRSSREKS"
     gene            7850..8101
                     /locus_tag="QGG16_03225"
     CDS             7850..8101
                     /locus_tag="QGG16_03225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24321.1"
                     /translation="MTKQLRFPAGSTDARSRSVLRHLDEHTRQIGRAGVASARAVLAS
                     CAPTILEGGAGVSGRTRPPLALPLEELADNAESELPAAA"
     gene            complement(8257..8652)
                     /locus_tag="QGG16_03230"
     CDS             complement(8257..8652)
                     /locus_tag="QGG16_03230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 sterol-binding domain-containing protein"
                     /protein_id="HJP24322.1"
                     /translation="MAELSFLSEEWIAALAEGGAALPEQPGVDGVVRFVMTSTPHGKV
                     QFRLVVADGRISEVLVGREGEAEAMVTWKYADAVAQFSGDLDADVAFMTGRCKVENAY
                     ARYVFDLRPVFGSLEWNGLLSDLARRTEF"
     gene            complement(8652..9578)
                     /gene="mca"
                     /locus_tag="QGG16_03235"
     CDS             complement(8652..9578)
                     /gene="mca"
                     /locus_tag="QGG16_03235"
                     /inference="COORDINATES: protein motif:HMM:TIGR03446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010126 - mycothiol metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mycothiol conjugate amidase Mca"
                     /protein_id="HJP24323.1"
                     /translation="MPTFVSVPADAPLRLLTVHAHPDDEASKGAATVAALHAGGVHCV
                     LVCCTGGEAGDVLNPAMDVPEVHADLPAVRDAELARAAEIIGYDEVIMLGYRDSGMKD
                     SDHNARPEAFANADHDEAVGRLVAIIRRVRPQVIVTYPDARGEYDHPDHVQVHDISVP
                     AFHAAGDPERYPEAGPAWQPSKLYYTMWSRARIAGLHAKFLELGIESPYDEGWFERPS
                     SDHLITTQVPISDHWDVRGEALRAHATQIDPTSKFWFGLPDEAARTVHPFDDYRLEAC
                     CVDGQPVEPAEFLTDGPIEDDLFAGVRAEVDA"
     gene            9699..10148
                     /locus_tag="QGG16_03240"
     CDS             9699..10148
                     /locus_tag="QGG16_03240"
                     /inference="COORDINATES: protein motif:HMM:NF014062.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HJP24324.1"
                     /translation="MDPEVWRWIWLGAAALFVMGEIAMTGAFFLLPFGVGATAATIVA
                     FAGASEPWSWLSFVSVSAASFAGLRPMARRMAQGGNPVGVGAGRLVGETGMVTSEPDE
                     AGTRLGTVRIGREDWHVESDDGTPLPTGTAIEVVRIEGTRAVVRPIS"
     gene            10177..>10491
                     /locus_tag="QGG16_03245"
     CDS             10177..>10491
                     /locus_tag="QGG16_03245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HJP24325.1"
                     /translation="MAISVVVLAVVAVVLFAFAAAGIKIVRPYQKGIVEQLGRYKATV
                     DPGLKLIIPVIQSLARVDMREQVIDVPPQEVITKDNVTVTVDAVIYYEPTDAQRLIYN
                     VAN"
BASE COUNT         1778 a         3624 c         3464 g         1625 t
ORIGIN      
        1 ggagatccac ttcagcctcg taggcggcga acgcgtcgaa tggactggtg aggatgacac
       61 caccgaagtc aaatagcacg acctcgatgc cggtcgacag ggatgggggc atcgagcgag
      121 cgtagggacc gactggccac ggggccatgc cgggaccaca gatagcctcg gcgcccatga
      181 gtgcccagtt cattttcacc atgcatcgtg tcggccggtt ccacccgccg gaccgggatg
      241 tcctcaagga catctcgttg tcgttctacc cgggggccaa gatcggcgtc ttgggcgcca
      301 acggtgctgg caagtcatca ctgctgcgga tcatggctgg aatcgacgac ggcttcaccg
      361 gcgaggcccg cctgaccgat ggctttaccg tcgggcttct cgagcaggag ccgatgctcg
      421 acgcgtccca ggacgtgcag gggaacgtca tggacggcgt gggcgcggta gccgacctcc
      481 tcacccgcta tgaggaggtg ctggccggct gggccgacgc cgatgccgac tacgacaagt
      541 tgggcgccga ccaggccgaa ctcgagaaga agatcgaagc agctggcgcc tgggacctgc
      601 aacgcaccat cgagatcgcc atggacgccc tccggcttcc gcccggtgac gcggccatcg
      661 actccctgtc gggcggcgag cgtcggcgtg tcgccctgtg tcgcctcctg ctgtcccgcc
      721 ccgacctgct gttgctggac gagcccacca accaccttga cgccgagtcg gtggcctggc
      781 tggaacgcac cctgcgcgac taccagggca ccgtcgtggc catcacccac gaccggtact
      841 tcctcgacaa cgttgccggc tggatcctcg aactggatcg gggccggggc ataccgtacg
      901 aaggcaacta ctcgggctgg ctcgaacaga agcaggcccg cctgtcgtct gaggagaagg
      961 tcgactcggc ccgcaagagg accatcgagc gggaactgga gtgggtccgg atggccccca
     1021 aggctcgcca gtccaagggt aaggcccgcc tctcggccta tgaccggctg gtggccgagg
     1081 ccgccgagac agagacccgg gcacgcgagc tccagatcga catcccggcc aaccagcgac
     1141 tcggtgatca ggtcatcgag gtcgaccacc tatcgaaggg attcgacgac cgcctcctca
     1201 tagacgacct gtcattctcg cttccgcctg ctggcatcgt cggcgtgatc ggcggcaatg
     1261 gcgccggcaa gacaaccctc ttccggatgc tcaccgcggc agctgacggg aacgccgaag
     1321 gggccacggc gcccgacgga ggcgcgatcc gaatcggccc cacggtcgag atcggctacg
     1381 tggaccagtc acgcgacagc ctcgatgcag agcgcaccgt ctaccaggag atcaccgacg
     1441 accgagaatt catcgagttg ggtcgtcggg aggtcaacgg tcgggcctac gtgtcgtcgt
     1501 tcaacttcaa gggctcggac cagcagaaga aggtcggcga cctttcgggc ggtgagcgca
     1561 accgggtaca cctggccaag gtgcttcgga gcggtgccaa cgtgctcctg ctcgacgagc
     1621 ccaccaacga cctcgacgtg gacaccctgc gtgcactcga gtcaggactg gacgcctacg
     1681 cgggctgcgc cgtggtcatc agccacgacc gatggttcct ggaccgggtg gccacccacg
     1741 tcctggcttt cgaaggcgac tcgcaggtcc ggtggttcga aggcaacttc accgaatacg
     1801 agtcgtaccg gaagaaggag ctggggctcg acgaccagcc ccaccgcatg aagtacaagc
     1861 ccctcgttcg atgaggccga gccagtgagc agggccgatg cccgcacccg gttgctcgcc
     1921 ccggacacgg tccgcgccgc agccctggtg ctgtgcgtca tcggtatcgc cgggatgatc
     1981 gtgacgtcca ttgccgacag gatcgacgcc gccctgacct tcggattcgt gggcgcagtc
     2041 ggagccctaa ccctcctact ggtcggcgtg ctggtccccg tcgtggaagc ggcgacctcg
     2101 ctggacgaac agcgggccgc cgaggtggaa gcctcagtgc aacgcctaat ggccgccggt
     2161 gcagacgagg gcgacctgcg agccaccgtg cgagccgccg tggagttggg ccgacgatcg
     2221 gcgggcgact gacccatggt cacgcccgag gatcaccaac tggcagctga cctggccacc
     2281 cgggccggag aggtgctgct cgacatccgg gcccgaatgg ttgccgacgg cgcgccggca
     2341 gccgtcctga agcacgaggg cgaccagcgg tcccacgagt tcctgatgga ggcgctggcc
     2401 gaggtccgtc ccgacgatgc cgtgctgtcc gaggagggca cggcgcacga ctgccacccc
     2461 agacggggga cgacgtctcg gacctggatc atcgacccgg tcgacggcac ccgcgagtac
     2521 tccgaaccgc cacgcaccga ctgggccgtg cacgtcgcac tggccgtcga cggacagccc
     2581 gtggtcgggg cggtggctct ccccgccttg ggatgcaccc tggccacggg ccagccgccg
     2641 gcggccaccg acctcccccc gatttccgca cggccccgga tggtggtgag ccgctcccgg
     2701 ccgcccgacg aggcgctcgc cgtgtgtaac gcgctgggtg gcgtcctggt ggagatgggc
     2761 tcggcgggcg ccaaggccat ggccgtggtg cggggcgagg tcgactgcta cgtccacgcc
     2821 ggcggacagt tcgaatggga caactgcgcg ccgaccgcgg tggcactggc cgctggccta
     2881 catgcctcac gaattgacgg atcgccactc acctacgacc atcccgaccc ttacctaccg
     2941 gatctggtga tctgccggac cgaactagcc gacgccgtgc tggccgcgct ggccaccccg
     3001 ccggcaccag aagcctgagt cccagtccgt gcacgtcgtc atcgcccgct gcaccgtcga
     3061 ctacgacggt cgcctcaccg cccaccttcc cgaggcagtc cggctcctca tggtcaaggc
     3121 cgacggctgc gtagccgtcc atgctgacgg cggggcctac aagcccttga actggatgaa
     3181 tgccccgaac acgctcacca tcgacgaagc gggcggcaag gccggtaacg cggcggccga
     3241 tcagcacgcg accgcacaga tctggcatgt ccgaagcccc aaaggcgagc acctgacaat
     3301 caccgtccac gaggtgctgg ccgaaatgga ccacgagatg ggtatcgacc cgggcctagt
     3361 gaaggacggc gtggaggccc acctccagga gctgctcgct gccgacccca cgtcgattta
     3421 caaaggacta cgcctcgtcc gccgagagtt ccccaccgat atcggaccgg tcgacctgct
     3481 gtgccgggac accgatggtg gggcggtggc catcgaggtc aaacggcggg gcgacatcga
     3541 cggggtggaa caactcaccc gctatctcga cttcttgaat cgcgatccga tgctgcgccc
     3601 ggtccgaggc gtgttcgtag cccaggagat caagcctcag gcccgggtgc tggccaccga
     3661 ccggggcatt ggttgcgtgg ttgtcgacta cgacgaactc cggggcattg aatccgacga
     3721 gatgaagctg ttctgaggac gcgccagtgg aactgatgac ggacgctccg acccggacgg
     3781 tcgacgtgct ggtggtgggc ggcggaccgg ccgggagcgc ggcagccatc acggcggccc
     3841 gggccggcca gatggtgctg ctggtcgaca aggcgtcctt ccctagggac aagtgctgcg
     3901 gcgacggcct gaccacgctg gccctgcgtc tcggcgagca gctcggcctg gatcccaacc
     3961 cgatcggtgg ctggcagccg gtggatgacg ctgtgatcca ctcgccgtcg ggccgttcgg
     4021 tccgcttccc gctgcctcgg gacgacggac ggtacgcagc ggtcgtcccc cgccgggagt
     4081 acgacgcggc gctcctggac ctggcaagga cagcgggcac cgaggtgctc gaaggacatg
     4141 cggtcaccgg cctcagcctg gacgccggga acggcctggg gaaccggacc ggagcgacgg
     4201 tgcacgtcga cggtctgggg tcggtacggg ctaccacggt ggtggccgcc gacggcatgt
     4261 ggtcgcccat ccgccgattc ctcgggttgt ccaccggcga cgaccgtggc cagtggcatg
     4321 ccttccgcca gtacgtgtcc gacgtgggcc cagcggccgc cgatctgcac gtgtggttcg
     4381 agtctgatct gttgcccggg tacgcgtggt ccttccccct gccaggtggt cgggccaacg
     4441 tgggcttcgg catcctccgt ggcggtccgg tggccgtggg agacaccgga cagatctggg
     4501 gcggtctcat ggaccggcca ccgatccggg ctgtgctggg cgaccatgcc cagcccgagg
     4561 gccgccgcac ggcttggccg attccggccc gggtggaccg ggccgtgctc gtccacggac
     4621 cagtgctgtt cgtaggcgat gcagcggcag ccactgacgc cctaaccggc gagggcatcg
     4681 gtcaagccct gctcaccggc atcctggccg ctgaggcctc ctcagccggc ggatcgacca
     4741 tggaagtggc cgccacgtac cgccgggccg tacgccgcaa tctggtagcc gaccatcgga
     4801 tgtcgatggc cctgcaacgg gtgctggccc atcgggtcgg cgcgaggacc gccgtccgtc
     4861 tagccgacct gacaccgtgg acccgacgga acttctcccg ctggatgttc gaggactacc
     4921 cgcgggccct gttggccacg ccccggcgat ggggtcgtgg tgtcctgtcc acgtcagggg
     4981 cctacgcagg ccactgagtc ggcgagccct tccccgaaac aacccccgta ggcttgactc
     5041 cgtggaaccc gccgacgtcg ggtccgtcga cgaactcgat ggcctgaccg acgacctgac
     5101 cgacaacccg tcggaacccg ccgaccagca cccgctcggg ccgctcggcg cgtccctcga
     5161 ccacgcagtc gacaaggcct ggaatcgcct tcgcggcaac cccacgttgg accgggtctt
     5221 ctacacggct agcgaactgg gcgacttcag cctcatctgg cacctcctgg gcacggcccg
     5281 gggagtgaca agccgccggg gcagccgcga ggccacccga ctggccctag ctctgggcgc
     5341 cgagtcggcg ctggtcaacg gggccatcaa gtcagccttt cggcgggaac gcccggccca
     5401 cgacggcgaa cgcccccatg gactccggca gccgatcacc agcagctttc cgtcgggtca
     5461 cgcatcggct gccttcatgg ccgccaccct cctctcggaa cggtcccgag tgaagcctgc
     5521 ctggtacgga ctggccgcca tcgtggccgc ctcgcggatc cacgtacgca tccaccatgc
     5581 gagcgacgtg gtggtcggcg ccggcatcgg gctgggtctg gggcgcgtga tccagaaagt
     5641 ctttccgctg cgttgaaccg tggaggcgga ccggcgtcaa cgccggaccg acggatcagt
     5701 tggtgggcgc tgcctcgagt tctgcgtcgc tcgtggcgag cagcaggcga agatccaaca
     5761 ggagatcagc aacctcagaa gcggccatca actcacggct ctgggtggtt cccaggcccc
     5821 gatcaatgat ggcgcggatc tcgtcgatcg tcgtgttgtc gagcgtctcg gtaacggcca
     5881 catcatctcc tctttcggtg aggatcccaa ccctagacgc gagtcggcgt gtatcccgtc
     5941 accggtttcg accgggcgcc agatctctga tcgcgtcgtc cacgtcgacc ccggcaagtg
     6001 gcacgatgct caataccggc gtggtgatgc ccgcggctac gtagcggtcg atgtgtgtcc
     6061 gacattgatc agggcttccg tgcaccaaca ggtcatcgac cactgagtcg ggcatcgcgt
     6121 ccagcgacgc ggaacgatca ccggcatccc accgctccca gtgctcgcct agcacgtcgc
     6181 tccggcccat ccactcgtgg aacgcccggt agacgggcac gttcacgtag gcggcgatca
     6241 accgcttggc ctggaccact acggcgtctc gatcgggcga cgggcaaacg aacaaccggg
     6301 ctgctacctc gggctcgggg cggccggccg ctgccgcggc gtcgcggaca atggtggtca
     6361 ccgtggtcgt atcgtcgact gacagccagt tcaccacggc cccgtcggcc tcccgacccg
     6421 ccagtctgag catcccctcg cgcagagcgg ccaccacgat gggtggcgcc tcgtccggaa
     6481 cgttgcccag ccgaaatccg gcaatgtcaa aactctcata ggactccgtg accttctcgc
     6541 cggtaaaggc cgctcgtagg aaccgaaccg tgtctcgtac ccgggcgtac ggcgcctcga
     6601 atccgatgcc gttccaacgt tcaacgatca cgttggagga ggtgcccaga ccgaggacga
     6661 agcgaccggg cgccgcggac gccatcgacg ccgcgctctg ggctagcagt gccggccccc
     6721 tggtgaacgc ggggaggatc gccgttccaa gccgcaactc gggcgcccag atggaagcga
     6781 gggccagcgg ggccagtccg tcgtggccgt cggcttcggc cgtccaggca tcggtgtagc
     6841 cctgttcgac cagtgcccgg aaccggtcgg cctggccggc caggggaccg gcgaacggca
     6901 ccgtcattcc gtatcgggat ccaccggtca tgacttctcc ctcgaggatc gaggattccg
     6961 gaactggcag gtctggctgg cagtggccag cagatggccg tcctcggacc aaaggtggac
     7021 ggtcccatgg gcatagccgt gcacgaggct gctgatccgt acgtcgacga ggatccagtc
     7081 ggtgtcgacc gggtccacga cccggagggt gttgtccagg ctctgaccgc ccccgaggcc
     7141 gccgcctacc gcgtcccggc cgccccacgg cacgtagtcc ccgagtacgg cgaggaacgc
     7201 cgggtcgacc accaggtggt cgggcacccg cacccacatg gctacctggc cgtcatccat
     7261 tgccggttcg ttggcctcgg tccgaccgcg gacgaggcga cgttcaaggt tggccgacac
     7321 cgaccgggtg gcactccgac tgggaaacgc cggacagtcc atgggaggta gcgcatctgg
     7381 cggtacgacc cacacgccag aacgttcgac gtcacgccgc ccgagggtgg ccaccacggc
     7441 gattacctca cggccgtcga cgtgcccacg ggccctggcc tgtgtggtgg cccgcccctc
     7501 ggccagcatc tcgacctcga aggtgagtag ctcaccgggt agggcgtggg agatgaactg
     7561 accggtggcc cacaccagcg gtcgaccggc gtccagttcg agggctcgga cggccgcacc
     7621 gaggccggtc ccgccgaaca ggcgccccgc actggagcac tcgtcttcgg tcaacggcag
     7681 gacccaggtg cccggacggt cgccgcggac cagttcctcg ctgagatacg acctcggtga
     7741 catgcacgga tgatgccgtc gttgggccac aacccgcaca cccggcgtga aaccacaggt
     7801 cagagccatt tctgaaatcg ctgtcacacc ccatctacat gatggagtca tgacaaagca
     7861 gctccgattc cccgctggtt ccactgacgc ccgatcccgg tccgtcctac gacacctcga
     7921 cgaacacacc cgccagatcg gcagggccgg ggtggctagc gcgcgggccg tcctcgcctc
     7981 atgtgcgccg acgatcctcg aagggggtgc cggcgtctcg ggtcgaaccc gcccgccgct
     8041 cgctcttcca ctggaggagc tcgccgacaa cgcggagagt gagttgccgg cggcagcctg
     8101 acccaccatg tggaccagct tgctcttcgg ctccctagcg tgcggcaaca gcgagttgcg
     8161 ggctgacctg gatcggggcc acgcagcgct catcagctgg ccggacctac gcgacgctcc
     8221 gcgggcgtag aagcagatcc ccgtgcgggc cccgactcag aactcggtcc gtctagccag
     8281 atcggacaac agaccgttcc actcgagcga accgaagacc ggacgcaggt cgaacacgta
     8341 ccgggcgtag gcgttctcga ccttgcaacg gccggtcatg aacgccacat cagcatccag
     8401 atcgccggag aactgggcca ctgcgtcggc gtacttccag gtgaccatgg cctcggcctc
     8461 gccctcacga cccaccagta cctccgagat ccggccgtcg gccaccacca ggcggaactg
     8521 cacctttccg tggggggtgc tggtcatcac gaaccgcacc acaccgtcca cgccgggctg
     8581 ctcgggtagc gcggcgccac cctcggccag cgcggcgatc cactcctcgg acaggaacga
     8641 gagctcagcc atcaagcatc cacctcggcc cggaccccgg caaataggtc gtcttcgatc
     8701 ggcccatcgg tcagaaactc ggcgggctcc acgggctggc cgtccacgca gcaggcctct
     8761 aggcggtagt cgtcgaatgg atggacggtg cgggccgcct cgtcgggcag gccaaaccag
     8821 aacttcgagg tcgggtcgat ctgggtggcg tgggcacgca gggcttcacc acgtacgtcc
     8881 cagtggtcgg agatgggcac ctgtgtggtg atgaggtggt cgctagacgg acgttcgaac
     8941 cacccctcgt cgtagggcga ctcgatcccc agttccagaa acttcgcgtg taggccggcg
     9001 atccgtgccc gggaccacat cgtgtaatag agcttcgacg gctgccaggc cgggccggct
     9061 tccgggtagc gctcggggtc gcccgccgcg tggaacgccg gcacggagat gtcatgcacc
     9121 tggacatggt cggggtggtc gtactcccca cgggcatccg gataggtgac gatgacctgg
     9181 ggtcggaccc gacggatgat ggccaccaga cgacctaccg cctcgtcgtg gtcggcgttg
     9241 gcgaaggcct cggggcgggc gttgtgatcc gagtccttca tgcccgaatc ccggtagccc
     9301 agcatgatca cctcgtcgta gccgatgatc tcggcggccc gagccaactc ggcgtcgcgt
     9361 accgcaggga ggtcggcatg aacctcgggc acatccatgg ccgggttcaa gacgtcgccc
     9421 gcctctccac cggtgcagca caccaggacg cagtgcactc ccccggcgtg caaggcggca
     9481 accgtcgcgg cccccttcga tgcctcgtcg tcgggatggg cgtggacggt caatagacgc
     9541 aacggcgcgt cggcggggac tgaaacgaag gtgggcacgg cgcatgacgg tagcgcccgc
     9601 ttcccaaccc ccggcgatac ttcgccggat ccggtatcga ggtccggtac gttggtcaac
     9661 gaaccacgat ccccacgaag agtgacagga gcgacccgat ggatcctgag gtctggcgct
     9721 ggatctggct tggcgccgcc gcgctattcg tcatgggcga gatcgccatg accggtgcat
     9781 tcttcctcct cccgttcggc gtgggggcca cagcggccac catcgtggcc ttcgctggcg
     9841 ccagcgaacc ctggtcgtgg ctgtccttcg tctccgtctc ggcggccagc ttcgccggac
     9901 tccgccccat ggcccgacgc atggcccagg gcggcaaccc ggtgggagtg ggtgccggcc
     9961 gactggtggg cgagaccggc atggtgacca gcgaacccga cgaggctggg acccgtctgg
    10021 gcacggtacg aatcggccgt gaagactggc acgtagagtc cgacgacggt acgccgttac
    10081 ctaccggcac cgccatcgaa gtcgtccgca tcgaaggcac ccgagccgtg gtgcgaccca
    10141 tcagctgacc aaacccgaca atcgaaagga tcccccatgg ctatatccgt cgtcgtgctc
    10201 gccgtcgtcg ccgtggtgct gtttgccttc gccgcggctg gcatcaagat cgtccgcccg
    10261 tatcagaagg gcattgtcga acagttgggt cgctacaagg ccaccgtgga cccaggtctc
    10321 aagctcatca tcccggtcat ccagtcgctt gcccgagttg acatgcgcga gcaggtcatc
    10381 gacgtacccc cgcaggaggt catcaccaag gacaacgtga cggtcactgt ggacgccgtc
    10441 atctactacg agcccaccga tgcccagcgc ctcatctaca acgtggccaa c
//
LOCUS       DASCMR010000132         1958 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000641097, whole genome shotgun sequence.
ACCESSION   DASCMR010000132 DASCMR010000000
VERSION     DASCMR010000132.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1958)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1958)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1958
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000641097"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            370..1647
                     /locus_tag="QGG16_03250"
     CDS             370..1647
                     /locus_tag="QGG16_03250"
                     /inference="COORDINATES: protein motif:HMM:NF012428.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HJP24326.1"
                     /translation="MIDDQRAASYAFIPSTDVPPVVERAEGCTLFFADGREVIDAGGG
                     AIAVNIGHGRSEVADAVAEATRRVSYVIPPWVTEERVALVELLRNRWLPPELTRVGFT
                     SGGSESVDTAIRLAITHFTSVGQPQRRKVIGREASYHGVTLASLAVGGHRARRSGFEQ
                     VLVDHPRMPNFDTEGLVRVIETEGPETIAAVIAEPVIGATAGALIPPDDWWPDVRTIC
                     DDHGILLITDEVMTGFGRTGRKFGIDHWDVVPDILVGGKGLSGGYAPLGGVVATDQVV
                     TPIAEAGRGLMFFTYSAHSAACAAGIAALTILEDEDLVAASTKKGADFLERLRLLEAH
                     PNVTEVRGLGLMIGIELTANPVTGDSVSESSGGLGARVVAEALRRGVWVYPAGDGHVP
                     DALLIGPPFTITDVEMDRVVTVVTESITTVCGV"
     gene            complement(1660..>1958)
                     /locus_tag="QGG16_03255"
     CDS             complement(1660..>1958)
                     /locus_tag="QGG16_03255"
                     /inference="COORDINATES: protein motif:HMM:NF013804.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SsrA-binding protein"
                     /protein_id="HJP24327.1"
                     /translation="LVGMHVPPYAMSGGESMGHDPDRPRKLLLHRAEIRRIIERMNLE
                     GLTLVPLKLYFKGGNAKVEVALARGRKLHDKRQALARKEADREADRAMGAVRRR"
BASE COUNT          301 a          642 c          657 g          358 t
ORIGIN      
        1 ggaccgaccc cgcgtgccgt taccggtcgc gatgactctc ggtcacctga ctaggtcagg
       61 cggcgagagc gagatcgtcc gtcttggcgt ctctgttggt gccccgttta aggagtctgg
      121 gccactccgg tcgcacgtca cgaccactgc aatcggcgtc gaaaccgatc agccccgtgg
      181 tcggtggccc gcaggccacc atgtgcggat atcaagtgct cggttgtcaa gttgtccgga
      241 ttcgtcccgg tccggtatcg ggaaccggtg cttcatccgc ttgacaaggg tatcgccggc
      301 ctgtgacccc cggtttcgat ggaccggtgt ctgagaaccc cactgggcag acaggcctgc
      361 cagactccgg tgatcgacga ccaacgtgct gcctcctacg cgttcatccc ctccactgac
      421 gtccccccgg tcgtcgagcg ggccgagggc tgcacactct ttttcgccga cggacgcgag
      481 gtcatcgatg ctggtggggg agccattgcc gtcaacatcg ggcacggacg ctccgaggtg
      541 gccgatgctg tagccgaagc cacccgacgg gtgtcgtacg tgatcccgcc gtgggtgacg
      601 gaggaacgtg tcgccctggt cgaactgctc cgtaaccgct ggctgccgcc agagttgacc
      661 cgggtgggct tcaccagcgg aggatccgaa tcagtcgaca cggccatccg gctggccatc
      721 acccacttca cgtcagtcgg acaacctcaa cgccgcaagg tcatcggccg agaagcttcc
      781 taccacgggg tgacccttgc ctccctcgcc gtcggcggcc accgggcccg ccggtccggg
      841 ttcgaacagg tgctcgttga ccatccacgg atgccgaact tcgataccga gggtctggtc
      901 agggtgattg agactgaggg gccggagaca atcgccgcgg tgatcgctga gccggtcatc
      961 ggagccacgg cgggcgccct gatccccccc gatgactggt ggcccgacgt tcggacgatc
     1021 tgtgatgatc acgggatcct gctgatcaca gatgaggtca tgaccggctt tgggcgtacc
     1081 ggccggaagt tcggcatcga ccactgggat gtcgtgcccg acatcctggt gggcggcaag
     1141 ggcctatccg gcggctacgc gccgctcggc ggggtagtcg ccaccgacca ggtggtcaca
     1201 cccatcgccg aggccggtcg tggcctgatg tttttcacct attcggccca ctcggcggcc
     1261 tgtgcggccg gtatcgccgc attgacaatc cttgaggacg aggacctggt ggcggccagt
     1321 accaagaagg gcgccgactt cttggaacgg ctgcgcctcc tggaggccca tcccaacgtc
     1381 accgaggtgc ggggcctagg actgatgatc ggtattgagc tgacggccaa cccagtgacc
     1441 ggtgattccg tcagcgagtc gtcaggcggg ctgggcgccc gggtggtagc cgaggccctg
     1501 cggcgcggcg tgtgggtcta tccggcgggg gacggccacg tgcccgatgc cctgctcatc
     1561 ggaccgccgt tcaccatcac ggacgtcgag atggaccggg tggtcaccgt ggtgaccgag
     1621 tcgatcacca ccgtctgtgg cgtctgacgg cctggacttt caacgccggc gtacggcccc
     1681 catggcccgg tcggcctcgc ggtcggcctc cttgcgggcc agcgcctggc gcttgtcgtg
     1741 cagcttgcgg cctcgcgcca gggctacctc gaccttggcg ttgccaccct tgaagtagag
     1801 cttgagtggc accagtgtga gaccctcgag gttcatgcgc tcgatgatgc ggcggatctc
     1861 ggcgcggtgt aacagcaact tgcggggccg gtcggggtcg tggcccatgg actcaccgcc
     1921 gctcatggcg tacggcggca cgtgcatgcc gactagcc
//
LOCUS       DASCMR010000133         9434 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000652440, whole genome shotgun sequence.
ACCESSION   DASCMR010000133 DASCMR010000000
VERSION     DASCMR010000133.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 9434)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9434)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9434
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000652440"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..802
                     /locus_tag="QGG16_03260"
     CDS             <1..802
                     /locus_tag="QGG16_03260"
                     /inference="COORDINATES: protein motif:HMM:NF013198.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24328.1"
                     /translation="EVDAVWAARLAGADEGVEAARAAVADAETALEVRRGAATAADEA
                     AVADVRAAADVRPDLPALALAGAPDVGAVADELPDAVADRAAHHPHESPWTMAFPLVV
                     LAGLSVLGGLVQLPFSSSTKRLEHWLEPTLFHNEVHLSIGAGTLWVLAVIAVAGGAVG
                     IAVAVAAYGQRRIDHTAFERPILAEAWRFDRKVSDFMGGPGRTGFDATAAFDREVVDG
                     AVEGMATLVRREAGLLRRFHNGLVRTYAVGIGLGAVGLVLWFLSRSNF"
     gene            802..2424
                     /locus_tag="QGG16_03265"
     CDS             802..2424
                     /locus_tag="QGG16_03265"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HJP24329.1"
                     /translation="MGALLTFVVASSPGVPFAVLPALIVVPAVGALLVVCLPRRRPEL
                     LKLVAVATSVIVGGMSVWLLKGFDATHGAEMQFTSQADWISDLGIQWLLGIDGISLFL
                     IVLTGVLFPIALLAVDPGHDDRAYYAWLLVLEAGVMGVFCALDLVVFFLCFEVVLVPM
                     YFLIGRWGHGNRAYAATKFFLYTMAGSALMLVGILAVAFLHADATGTSVTFDLVAIAE
                     AQAIDTNAARWIFAAFALAFAVKVPIFPLHTWLPDAHTEAPTAGSVILAGVLLKLGTY
                     GFLRFGLYLFPEASHFFAPVFLTLGVVGIIYGAVVATMQRDLKRLVAYSSVAHLGFIV
                     LGTFALNTEGIEGGLLQMVNHGVSTSALFLLVGMIYERRHTRQIDELGGLQKSAPVMA
                     AVFTLVMLSSIGLPGLNGFVGEFLVLVGAFNAHRWWAVVAAGGVVLAALYLLWAYQRV
                     FHGPAKGDNAEMPDLKLREGLVLAPLLALIVFMGVYPKPVIERMEPAVDALVAHIEEH
                     VDGFHEPTSRFGVDIEGAGDHGSDHADEGDDH"
     gene            2424..3917
                     /locus_tag="QGG16_03270"
     CDS             2424..3917
                     /locus_tag="QGG16_03270"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HJP24330.1"
                     /translation="MSTVVTPEVLWWALIPVILLSAGGMLLLTVASIVRRLPDALPQA
                     WTVVTGLAVLVASVPMWNEVRDGGPRSYLGGMVAVDGSTVLVTAILAIAVVATALLAR
                     PYLAREDLPGVELYVLLMLSATGGVVMASADDLIVLFLGLEILSIAVYVLAALHLRRI
                     ESQEAALKYFVLGAFASAFLLYGMALLYGATGSTRLALIAEHLSTVVLLRDGMLLAGI
                     ALLLVGLAFKVAAVPFHAWTPDVYQGAPSPVVAWMAAGVKAAGFAAMGRVLVVTLGTH
                     ASDWSPAVSVLAGLSVVVGASVAVLQTDVRRMLAYSSIAHAGFLLLGVQAADARGAAA
                     VYAYLVVYTLLATGSFAVLTVMGGPGDSAHSLDDYRGLVRRRPVLAGAFTVLLLGQAG
                     VPFTGGFVAKLGVLAAAVEGRGYWVAGVAMLAAAIAAFVYLRILVAMYLEDAGDAGDA
                     GDAEDAGVPLGARVVIGVACTGVLAIGIVPGPLMDLARDAVPMLVGS"
     gene            4081..4446
                     /locus_tag="QGG16_03275"
     CDS             4081..4446
                     /locus_tag="QGG16_03275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HJP24331.1"
                     /translation="MSDFLRSWLVVVVFGGLAVLLVSAFLGLGSLLRPSRETSQKVMN
                     YESGVDPQGDMWSQSNIRYYVFALMFVLFDVEAVFIFPWATRLEVYGVFGLVEMAIFI
                     FILALGLFYAWRKRLLRWI"
     gene            4475..4975
                     /locus_tag="QGG16_03280"
     CDS             4475..4975
                     /locus_tag="QGG16_03280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HJP24332.1"
                     /translation="MGLVESGKLPKPLTKLLNVSRKYSLWVYQWGLACCAIEMGAAFA
                     SPRYDVMRLGVIPFPASPRQADLVVVSGTVTDKMAPAVRRLYEQMPDPKYVISMGSCA
                     NCGGPYWDSYSVTKGVDQIIPVDVYVPGCPPRPEALLEGIVLLQERIATEDMTERWTG
                     DPIVVT"
     gene            4953..5672
                     /locus_tag="QGG16_03285"
     CDS             4953..5672
                     /locus_tag="QGG16_03285"
                     /inference="COORDINATES: protein motif:HMM:NF012549.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HJP24333.1"
                     /translation="MIPLSSPDADTTVDTDEVQADPTDEQRDALVATLADALGSGLVE
                     SHVEPGVDAWVRVTADAWVETATVLRDRCAMTYFNFLSAVDWMPSPYGRDMDAQVDLP
                     HEASDGSDAPADAFETGVAGGETRFQLLARVHDPVGHVGITIKSDLAGDRPEVDSWIG
                     VYPGVDWHEREAREMFGISFRNHPNQVHLYLPSHFEGNPLRKDYPLLARRVKPWPGIV
                     DVELMPGGDDDDASAEEGDAS"
     gene            5678..6841
                     /locus_tag="QGG16_03290"
     CDS             5678..6841
                     /locus_tag="QGG16_03290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D 1"
                     /protein_id="HJP24334.1"
                     /translation="MSDPRQMAYIAGQASDARVNVEIETEGMTLNIGPQHPATHGTLR
                     IIVKLDGERVVAAEPVMGYMHRGYEKLSEVRTYPQVTTLVNRIDWLGSFANEVPFILA
                     AERLMDVEAPPRAQWIRTVLFELSRIANVVLFLGDMGVQLGAVTPVFFAFRDREFVLN
                     QIEAVTGGRFHPNFDRIGGLKDDLPKGWIDETKGVLGRIRTFCDEMEDLVTGNEIFQS
                     RTRGIGVIPADVGLSYGLSGANIRASGVDWDLRRDGGIGLVHDQLDWKVWTHPDGDSF
                     ARYWVRLQEVREACGMVDQLLDGIPSGPVMAKVPRIIKVPAGEAYVETENPLGIMGYY
                     VVSKGDLVPYRVKIRSASFNNVSITPWLLEGTYVPDVVSILASLYFILGDIDR"
     gene            6838..7878
                     /locus_tag="QGG16_03295"
     CDS             6838..7878
                     /locus_tag="QGG16_03295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="complex I subunit 1 family protein"
                     /protein_id="HJP24335.1"
                     /translation="MSGALTFAVELAWWQQTGIRAVVGLLAVLLPAGALVYLFLFKMM
                     SFMQSRLGPMEAGPFGSLQLLAEVGKFLQKEDVIPAKADRIVFKAAPFVVLISTFLLV
                     LVIPAGPDAWFIDVDTGIFLALAVSSISVIGILMAGWASSSKYSLLGGLRAAGQLVAY
                     ELPLVLAVMGVVIQAGTLNVQGIVMAQATGEIFGWGGIGNPFIITQFLGFAIFLVAVQ
                     AELTQPPFDMPVAESEIVTGYLTEYTGLRFLLFFIGEFATAGIFSALAATLFLGGWYV
                     PGIDPTSDLFNVIGPAILLGKVILVAFLIFWFRFTYPRFREDQLQQLAWKVLIPLSLA
                     NIVLTGILKVVF"
     gene            7878..8402
                     /locus_tag="QGG16_03300"
     CDS             7878..8402
                     /locus_tag="QGG16_03300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HJP24336.1"
                     /translation="MSALPKLALPKVPGLVKGLGVTLKTMVRTLTKGSHTVQYPRVKE
                     APTPRARGVIMLHEDNCTACMLCARECPDWCIYIEGHKYKAPPRRPGGKPRQKNALDR
                     FDIDFALCMYCGICVDVCPFEALFWSPEFEYSEPRIADLLHDKSKLGQWMETVPDFQD
                     YEAGSEAKKLQVPR"
     gene            8399..8944
                     /locus_tag="QGG16_03305"
     CDS             8399..8944
                     /locus_tag="QGG16_03305"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: protein motif:HMM:NF012709.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HJP24337.1"
                     /translation="MSTLAALADMDRLTSGEALVAQNVAFAVMAITMIVSALRMVTTH
                     NVVHAALYLVVVLSGVAGIFILLGAEFVGVTQVMVYIGAIVVLFLFGIMLTKGSFGDD
                     DGVSGERRLMAGLVGLLVFGVMTAALVDSFADAELDRSAPSTTAEIADSIFSAYIVPF
                     EAVSVLLLAALIGAIVVARRD"
     gene            8955..9254
                     /gene="nuoK"
                     /locus_tag="QGG16_03310"
     CDS             8955..9254
                     /gene="nuoK"
                     /locus_tag="QGG16_03310"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HJP24338.1"
                     /translation="MLLNQFLILSAVLFSIGVYGVLARRNGVLVLMSIELILNAVNIN
                     LVAFGAFRASVGGEVFALFVIAVAAAEVGVGLAMVLLLYRNRRSIDLTLIDQLRG"
BASE COUNT         1271 a         3134 c         3117 g         1912 t
ORIGIN      
        1 cgaggtggat gccgtctggg ctgcccgtct ggccggtgcc gacgagggcg tcgaggccgc
       61 acgcgctgcg gtggccgatg ccgagactgc gttggaggtc cgccgtgggg cggcgaccgc
      121 agccgacgag gccgcggtgg cggatgtccg tgccgcggct gacgtgcgac ccgaccttcc
      181 cgccctggcc ctggctggcg cccccgacgt tggtgcggtg gctgacgagc tacccgacgc
      241 ggtggccgat cgcgccgctc atcacccgca cgaatccccg tggaccatgg ccttcccgct
      301 cgtcgtcctg gccggcctga gcgtgctggg tgggctcgtg cagcttccct tctcatcgag
      361 caccaagcgg ctcgagcact ggctggagcc cacgctgttc cacaacgagg tccacctgtc
      421 tattggcgcg gggaccctgt gggtgctggc cgtcattgcg gtggccggcg gcgcggtggg
      481 catcgcggtg gccgtagcgg cctacggaca gcgtcgcatc gaccacaccg ccttcgagcg
      541 tccgatcctc gccgaggcgt ggcgattcga tcggaaggtc tcggacttca tgggcggtcc
      601 gggccgcacc ggcttcgacg ccaccgcagc cttcgaccgc gaggtggtcg acggcgcggt
      661 cgaggggatg gccaccctgg ttcgccggga ggccggcctg ctccggcgtt tccacaacgg
      721 cctggttcgc acctacgcag tgggcatcgg ccttggggct gtgggcctcg tgctctggtt
      781 cctctcgagg agcaatttct gatgggtgcc ctcttgacct tcgtggtcgc ctcctctccc
      841 ggtgtgccgt tcgccgtgct gccggcgctg atcgtggtgc ccgccgtggg cgccctgctg
      901 gtggtctgcc tgccccgtcg tcgcccagag ctgctcaagt tggtggccgt ggccacctcg
      961 gtgatcgtgg gtggtatgtc ggtttggctg ttgaagggtt tcgacgccac ccacggagcc
     1021 gagatgcagt tcacgtcaca agctgactgg atctccgacc tgggcatcca gtggctgctg
     1081 ggcatcgacg ggatctcgtt gttcctaatc gtgctgaccg gcgtgctgtt cccgatcgcc
     1141 ctgctggccg tcgaccccgg gcacgacgac cgggcctact acgcgtggct gctcgtgctg
     1201 gaggccggcg tcatgggtgt gttctgcgcg ctggacctgg tggtcttctt cctctgcttc
     1261 gaggtcgtcc tggtgcccat gtacttcctc atcggacggt gggggcacgg caaccgggca
     1321 tacgcggcga ccaagttctt cctctacacg atggccggat cggctctcat gctggtgggg
     1381 atcctggccg tggccttcct ccacgcggac gccaccggca cctcggtcac cttcgacttg
     1441 gtggccattg ccgaggccca ggccatcgac accaatgcgg cccgctggat ctttgccgcc
     1501 ttcgcgctgg ccttcgcggt gaaggtgccg atcttcccac tgcacacctg gctgcccgat
     1561 gcccataccg aggcgccgac ggctggctcg gtgatcttgg ccggcgtgct gctcaagttg
     1621 ggcacctacg gtttcctgcg gttcggcctc tacctgttcc ccgaggcctc ccacttcttc
     1681 gccccggtgt tcctgactct gggcgtggtc ggcatcatct acggcgccgt ggtggccacc
     1741 atgcagcggg acctgaagcg cctcgtggcc tattcctcgg tggcccatct gggcttcatc
     1801 gtgttgggca ccttcgccct gaacaccgag ggcatcgagg gcggcctgct ccagatggtc
     1861 aaccacggcg tgtcgaccag cgccctgttc ctgctggtcg gcatgatcta cgaacgtcgc
     1921 cacacccgtc agattgacga gttgggtggc ctgcagaagt cggcgccggt catggccgcc
     1981 gtgtttaccc tggtcatgct gtcgtcgatc ggcctgcccg gtctgaacgg cttcgtgggc
     2041 gagttcctgg tgctggtcgg agcgttcaac gcccaccgtt ggtgggccgt ggtggccgcc
     2101 ggaggcgtgg tcctagccgc cctctatctg ctgtgggcct accagcgggt cttccatggc
     2161 ccagccaagg gcgacaacgc cgagatgccc gacctgaaac tccgtgaggg tctggtgctg
     2221 gcaccgctgc tggctctcat cgtcttcatg ggcgtctacc cgaagccggt gatcgaacgg
     2281 atggaacctg cggtggatgc cctggtggcc cacatcgagg agcacgtgga cggcttccac
     2341 gagccgacgt cccgcttcgg cgtcgacatc gaaggcgctg gcgaccacgg atccgaccac
     2401 gccgacgagg gggacgatca ctgatgtcga ccgtcgtcac ccccgaggtc ctgtggtggg
     2461 ccctgattcc ggtgatcctg ctctcggccg gtgggatgct gctgctgact gtggcctcga
     2521 tcgtccgccg ccttcccgac gccctgcccc aggcctggac ggtcgtcacc ggcctggccg
     2581 tgctggtggc ctcggtgccc atgtggaacg aggtgcgtga cggtggaccc cgctcatatc
     2641 tgggcggcat ggtcgctgtc gacgggtcca cggtgctggt caccgcgata ctggccatcg
     2701 cggtggtggc caccgccctg ttggcccgtc cttacctggc ccgtgaggat ctgccgggcg
     2761 tcgagttgta cgtcctgctc atgctctcgg cgactggtgg cgtggtcatg gcgtcggccg
     2821 acgacctcat cgtcctgttc ctgggcctgg agatcctgtc gatcgccgtg tacgtgctgg
     2881 ccgccctaca cctgcgccgc attgagtccc aggaggcggc gctcaaatac tttgtgctcg
     2941 gggcgttcgc ctcggccttc ctgctctacg gcatggcgct cctatacggc gccaccggtt
     3001 cgacccgtct ggccctgatc gccgaacacc tatcgacggt ggtgctgctc agggacggga
     3061 tgctgctggc cggcatcgcc ctgctgctgg tcggcctggc cttcaaggtg gccgccgtgc
     3121 ctttccacgc ctggacgccc gacgtttacc agggggcgcc cagcccggtc gtggcgtgga
     3181 tggccgccgg ggtgaaggcg gcaggcttcg cggcgatggg gcgggtcctc gtggtgaccc
     3241 tcgggactca cgcctcggac tggtcgccgg ccgtgtccgt gcttgctgga ctcagcgtgg
     3301 tggtcggcgc ctcggtcgcc gtgctgcaga ccgacgttcg acggatgctc gcctactcct
     3361 cgattgccca cgctggcttc ctgcttctag gcgtgcaggc cgctgacgcc cggggtgccg
     3421 cggcggtcta cgcctatctg gtcgtctaca cgctgctggc taccgggagc ttcgccgtgc
     3481 tcaccgtcat gggtggtccg ggcgattcgg cccattcgct cgacgactac cggggccttg
     3541 tccgtcgccg cccggtactg gccggggcgt ttaccgtcct gctgctgggt caggcgggtg
     3601 tgccattcac cggtgggttc gtggccaagt tgggcgtgct ggccgctgcg gttgagggcc
     3661 ggggctactg ggtggctggc gtggccatgc tggccgccgc tatcgccgcc ttcgtctacc
     3721 tccgaatcct cgtcgccatg tacttggaag atgccggaga tgccggagat gccggagatg
     3781 ccgaggatgc cggtgtcccg ttgggtgccc gggtggtcat cggcgtggcg tgtaccggcg
     3841 tgctggccat cgggatcgtg cccggacccc tcatggacct ggcccgagac gccgtcccca
     3901 tgctggtcgg tagttgatcg tgggccccgc tgacaccctc aggatcccca ccgtgggccc
     3961 cgtcagccgg cgtcgttggg tcttcgtgaa cccgttcaca tccggtaacc tgcccgggtc
     4021 gacgggcctg tggtctcgtt cgccgtcgcc catccgcccg attcgttagg ttctcccttc
     4081 gtgtccgact tccttcgtag ctggctcgtg gtggtcgtct tcggcggcct cgccgtgctg
     4141 ttggtgtcgg cgttcctggg cttgggcagc ttgcttcgac cgtcgcgtga gacctcgcag
     4201 aaggtcatga actacgagtc cggtgtcgac ccgcagggcg acatgtggag ccagtccaac
     4261 atccggtact acgtgttcgc cctgatgttc gtgctgttcg acgtggaagc cgtgttcatc
     4321 ttcccgtggg ccacccgcct cgaggtctat ggcgtcttcg ggctggtcga gatggccatc
     4381 ttcatcttca tcctggcgct cggactgttc tacgcctggc gtaagcgtct gctccggtgg
     4441 atctgagcgg gcgacggtag gggagtaacg aatcatggga ctcgtcgaga gcggcaagct
     4501 gccgaagccg ctgaccaagt tgctcaacgt cagccgcaag tactccctct gggtgtacca
     4561 gtggggcttg gcgtgctgcg ccatcgagat gggcgcggcg ttcgcctcgc cgcgctacga
     4621 cgtgatgcgc ctgggcgtca tcccgtttcc ggccagcccc cgtcaggccg atctggtggt
     4681 tgtgtcgggc acagtgaccg acaagatggc gccggccgtg cgtcgtcttt acgagcagat
     4741 gcccgatccc aagtacgtga tttccatggg ttcgtgcgcc aactgcggcg gcccctactg
     4801 ggatagctac tcggtgacca agggcgtcga ccagatcatc cctgttgacg tctacgtgcc
     4861 cggctgcccg ccgcgcccgg aagccctgct ggagggcatc gtgctgctcc aggagcgcat
     4921 tgccaccgag gacatgactg aacgttggac gggtgatccc attgtcgtca cctgacgctg
     4981 acaccacggt ggacaccgac gaggtacagg cggacccgac tgacgagcag cgcgacgcgc
     5041 tggtcgcgac gctggccgat gcgctgggaa gcggcctggt cgagagccac gtcgagcccg
     5101 gtgtcgatgc ctgggtacgg gtgaccgccg acgcgtgggt cgaaacagcg accgtcttgc
     5161 gggaccgctg cgccatgacg tacttcaact tcctgtcggc cgtcgactgg atgccgtcgc
     5221 cctacggacg cgacatggac gcccaggtgg acctccccca tgaggcatcc gacgggtcgg
     5281 atgctccggc tgacgcgttc gagacgggtg tcgccggcgg cgagacccgc ttccagctgc
     5341 tggcccgggt ccatgacccg gtgggccatg tgggcataac catcaagtcc gacctggcgg
     5401 gcgacaggcc cgaggtcgac tcgtggatcg gcgtctaccc cggtgtggac tggcacgagc
     5461 gtgaggccag ggagatgttc ggcatctcgt tccggaacca tcccaatcag gtgcacctct
     5521 acctgccgtc gcacttcgag gggaacccgc tgcgcaagga ctatccgctg ctggcccgcc
     5581 gggtgaagcc ctggccgggc atcgtcgacg tggagctcat gcccggcgga gatgacgatg
     5641 acgcgagtgc ggaagaggga gacgcatcgt gaccccggtg agcgatcccc gccaaatggc
     5701 ctacatcgct ggccaggcca gcgatgcccg agtcaatgtc gagatcgaga ccgagggcat
     5761 gaccctcaac atcggtcctc agcatccggc cacccacggc acgctgcgca tcatcgtcaa
     5821 gttggacggt gaacgggtgg ttgccgccga accggtcatg ggctacatgc accggggcta
     5881 cgagaagctc tccgaggtcc ggacgtaccc gcaggtcacc acgctggtca accgcatcga
     5941 ctggttgggc agcttcgcca acgaggtgcc gttcatcctg gctgccgagc ggctcatgga
     6001 cgtcgaggcg ccgccccgcg cccagtggat ccgcactgtc ctgttcgaac tgtcccggat
     6061 cgccaacgtt gtgctgttcc tcggcgacat gggcgtccag ttgggagccg tcaccccggt
     6121 cttcttcgcc ttccgcgacc gcgagttcgt ccttaaccag atcgaggctg tcaccggtgg
     6181 tcggttccat cccaacttcg accgcatcgg tgggctgaag gacgaccttc ccaagggctg
     6241 gatcgatgag acgaagggcg tgctgggccg catccgcacg ttctgcgacg agatggagga
     6301 cctcgttacc ggcaatgaga tcttccagtc ccggactcgg ggcatcggcg tgatcccggc
     6361 cgacgtgggc ctgtcctacg gactgtcggg cgccaacatc cgggcctcgg gtgtcgactg
     6421 ggatctccgc cgcgacggcg gcatcggcct ggtccacgac cagttggact ggaaagtctg
     6481 gacccatcct gacggcgact cgttcgcccg ctactgggtg cgcctccagg aggtccgtga
     6541 agcctgtggc atggttgacc agttgctcga tggcatcccg tcgggtcccg tcatggccaa
     6601 ggtgccgcgc atcatcaagg tgccggctgg cgaggcgtac gtcgagaccg agaacccgct
     6661 gggcatcatg ggctactacg tggtgtccaa gggcgacctg gtgccgtacc gcgtgaagat
     6721 ccgctcagcg tcgttcaaca atgtctcgat cacgccgtgg ctcctcgagg gcacctacgt
     6781 gcctgacgtg gtgtcgatcc tggccagcct ttacttcatc ctcggggaca tcgatcgatg
     6841 agcggcgcct tgaccttcgc ggtcgagctg gcctggtggc agcagaccgg gatccgtgcc
     6901 gtggtcggtc tgctggccgt gctgctgcct gccggcgcgc tcgtctacct gttcctcttc
     6961 aagatgatga gcttcatgca gagccggctc gggcccatgg aggctggtcc gttcggatcg
     7021 ctgcagttgc tggccgaggt cggcaagttc ctccagaagg aggacgtcat cccagccaag
     7081 gccgaccgga tcgtcttcaa ggcggctccg ttcgtggtgc tcatctccac gttcctgctg
     7141 gtgctggtca ttcctgccgg accggacgcc tggttcatcg acgtcgacac cggcatcttc
     7201 ctggcgctgg ccgtgtcgtc catctcggtc atcgggatcc tcatggccgg ttgggcttcg
     7261 tcatcgaagt actcgctgct gggaggcctg cgggccgccg ggcagctggt ggcctacgag
     7321 ctgcccctgg tcctggccgt catgggcgtg gtcatccagg ccggcaccct caacgtccag
     7381 ggcatcgtca tggcccaggc aaccggagag atcttcgggt ggggcggcat cggcaatccg
     7441 ttcatcatca cccagttcct aggcttcgcc atttttctgg tggccgttca agccgagctc
     7501 acccagccac cgttcgacat gccggtggcc gagtccgaga tcgtcaccgg ctacctcacc
     7561 gagtacaccg gccttcgctt cctgctgttc ttcatcggcg agttcgccac ggccggcatc
     7621 ttctcggctc tggccgccac actgttcttg ggcggctggt acgtgccggg catcgatccg
     7681 accagcgatc tgttcaacgt catcggcccg gccatcctgc tgggcaaggt gatcctggtg
     7741 gctttcctga tcttctggtt ccgcttcacc tacccccgct tccgtgagga ccagctccag
     7801 cagttggcct ggaaggtgct cattcccctg tcgctggcca acatcgtgct gaccggcatc
     7861 ctgaaggtgg tcttctgatg tccgctctcc cgaaactggc gctccccaag gttcccggcc
     7921 tggtcaaggg cctcggtgtc accctgaaga ccatggtgcg caccctgacc aagggttccc
     7981 acaccgtgca gtacccacgg gtaaaggaag ctccgacgcc ccgggcccgc ggcgtgatca
     8041 tgctgcacga ggacaactgc acggcctgca tgctctgcgc ccgcgaatgc ccggactggt
     8101 gcatctacat cgagggccac aagtacaagg cgccgccgcg acggccgggc ggaaagcccc
     8161 gccagaagaa cgccctggac cgcttcgaca tcgacttcgc cctctgcatg tactgcggga
     8221 tctgcgtaga tgtctgtccg ttcgaggccc tgttctggtc gccggagttc gagtactccg
     8281 agccgaggat cgctgacctg ctccacgaca agtccaagct cggacagtgg atggagaccg
     8341 tcccggactt ccaggactac gaggctggca gtgaggccaa gaaactccag gtgccccgat
     8401 gagcacgctt gccgcactcg ctgacatgga ccgtctgacc agcggcgagg ccctggtggc
     8461 ccagaacgtg gcgttcgccg tgatggccat cacgatgatc gtctcggcgc ttcggatggt
     8521 caccacccac aatgttgtcc acgctgccct ctacctggtg gtcgtgctgt ctggggtggc
     8581 cggcatcttc atcctgctgg gtgccgagtt cgtgggcgtc acccaggtga tggtctacat
     8641 cggcgccatc gtcgtcctct tcctgttcgg catcatgctc accaagggct ccttcggtga
     8701 cgacgatggc gtgtcgggtg agcggcgcct catggctgga cttgttggac tgctggtctt
     8761 cggcgtcatg accgccgccc tggtcgactc gttcgctgat gccgagttgg accggtcggc
     8821 ccccagcacc acggccgaga tcgccgacag catcttcagc gcctacatcg tccccttcga
     8881 ggccgtgtcg gtcctgctgc tcgccgccct catcggcgcc atcgtcgtgg cacggcggga
     8941 ctgagggggc tgagatgctg ctgaaccagt tcctcatcct gtccgccgtg ctgttctcca
     9001 tcggtgtgta cggcgtgctg gcccgtcgca acggcgtgct ggtgctgatg tccatcgagc
     9061 tcatcttgaa cgcagtgaac atcaacctcg tggccttcgg tgccttccgg gcgtcggtgg
     9121 gcggcgaggt gtttgccctg ttcgtcatcg cagttgccgc ggctgaggtc ggggtgggcc
     9181 tggccatggt gctgctgttg taccgcaacc gtcgatccat cgatctcacc ctgatcgacc
     9241 agttgagggg ctgatcaccg tggacgcact cctcaccatc gcatcggcgg ccgccaccgc
     9301 ttcggctacc ggcgacggcc tggccctcgg tatcaccgag ggtggtagtt ggctgcttcg
     9361 caacgtctgg ctgatcccgt tgcttcccgc gctctcgttc atcgggatcc tgttcttcgg
     9421 caagaagatg cccc
//
LOCUS       DASCMR010000134         1789 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000662994, whole genome shotgun sequence.
ACCESSION   DASCMR010000134 DASCMR010000000
VERSION     DASCMR010000134.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1789)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1789)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1789
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000662994"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..563)
                     /locus_tag="QGG16_03315"
     CDS             complement(<1..563)
                     /locus_tag="QGG16_03315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HJP24339.1"
                     /translation="MTTDDSDRTISAIFDPSRWEVVPGFDLTDLTYHRAVDQATVRIA
                     FDRPEVRNAFRPHTVDELFRVLDHARMSSDVGTVLLTGNGPSSSDGGWAFCSGGDQRI
                     RGTDGYRYADGDTAESVDPARTGRLHILEVQRLIRFMPKVVIAVVPGWAAGGGHSLHV
                     VADLTLASRQHAKFKQTDADVASFDGG"
     gene            complement(667..1431)
                     /locus_tag="QGG16_03320"
     CDS             complement(667..1431)
                     /locus_tag="QGG16_03320"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024967.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HJP24340.1"
                     /translation="MATDPLNEDPVAELPVSAAGDVDYPTYFHLLVDVHRRLRPVRYL
                     EIGVNQGHSLGLVRPQTKIVGVDPEPLVTALDHPDWTMVAATSEEFFKSHDVTGLLGG
                     SVDLAFVDGLHHFEVAMADVLAIEPYAHPGTVVLVHDVLPIDAATSTRDRMTAVWSGD
                     VWKAVVLLRENRPDLTVTTLDVGPTGMAVITGFGDQSSTSALAVPDDTWIDAAVSKMM
                     PVTYDDLQAMGLSEALSLAPGTPSALEECLSGFGVP"
     gene            complement(1413..>1789)
                     /locus_tag="QGG16_03325"
     CDS             complement(1413..>1789)
                     /locus_tag="QGG16_03325"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF017522.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TylF/MycF/NovP-related O-methyltransferase"
                     /protein_id="HJP24341.1"
                     /translation="DKGVDLSEVEALAVSRPEVEASFARYGLLDSQVRFLEGWFADTL
                     PTAPIERLALLRLDGDLYQSTWEALENLYPKLSVGGILIVDDYGAFEPCRQAVEDYRA
                     RCNISEVVVPVDWTGVWWQRTH"
BASE COUNT          348 a          572 c          550 g          319 t
ORIGIN      
        1 aagccaccgt cgaaactggc cacatcggcg tcggtttgct tgaatttcgc gtgctgccga
       61 ctggccagag tgaggtcggc caccacgtgg aggctgtgac cgccgccggc cgcccagccg
      121 ggcaccacgg cgatgacaac cttgggcatg aaccggataa gtcgttgcac ttcgagaata
      181 tggaggcgac cagtgcgcgc gggatccacc gactcagcgg tgtctccgtc ggcgtagcgg
      241 taaccgtccg ttccgcggat ccgttggtcg ccgcccgagc aaaaggccca accgccgtca
      301 ctgctggacg gaccgttgcc ggttaacagg acggtgccca cgtcggaact catccgggca
      361 tggtccaaga ccctgaacaa ctcgtcgacc gtgtgcggtc ggaaggcgtt ccgcacctct
      421 ggccgatcaa aggcgatccg cactgtggcc tggtccacgg cccggtggta ggtcaggtcg
      481 gtcaggtcga agcccggcac cacctcccac ctactgggat cgaagatcgc tgaaatcgtg
      541 cggtccgaat cgtccgtcgt catgggccgg gagcatagga ccggatctag atcgggctgg
      601 aaccagcccc gcgatcgctc cgtcgatatc cggcattcct gctgaagaag cgccagctca
      661 gggcatctag ggcaccccaa aaccggatag gcattcctca agggcacttg gcgtgcccgg
      721 cgccagactt agagcttcac tcagtcccat agcctgtaaa tcgtcataag tgacgggcat
      781 catcttcgac accgctgcat ctatccaggt gtcgtctggc accgccaatg ccgaggttga
      841 cgactgatcg ccgaaaccgg tgatcacggc catgcccgtt ggccctacgt ccagcgtggt
      901 gaccgtgagg tcaggccggt tctcccggag gagcacgacc gccttccata cgtcaccgct
      961 ccacacggct gtcatccgat cacgggtgga cgtggcagcg tcgatcggca ggacgtcatg
     1021 gaccagcacc accgttcccg gatgggcgta aggctcgatg gccagaacat cagccatcgc
     1081 cacctcgaag tgatgcagtc cgtcaacgaa cgccaggtcc accgaaccac ccaggagacc
     1141 tgtgacgtcg tgagacttga agaactcctc agaggtggcg gcaaccatcg tccagtcggg
     1201 atggtcgagg gccgtgacca gcggttctgg gtcgactccc acgatcttgg tctggggtcg
     1261 aacgaggcca agcgagtgtc cctgattgac gccgatttcc aggtagcgga ctggtcgtaa
     1321 ccgtcggtgt acgtcgacca ggaggtggaa gtacgtcgga taatcgacgt ctccggctgc
     1381 cgatacgggc agttcagcta ccggatcttc gttcaatggg tccgttgcca ccagacgccc
     1441 gtccagtcaa ccgggacgac cacctcggaa atgttgcatc tagcgcggta gtcctcgacg
     1501 gcctgccggc atggctcgaa cgccccgtag tcgtccacga tcaggatccc gcccactgag
     1561 agcttcggat acaggttctc gagtgcctcc cacgttgact ggtagagatc gccgtctaac
     1621 cgcagcaggg cgaggcgctc gatgggggcc gtgggcagcg tgtcggcgaa ccaaccctct
     1681 aggaagcgaa cttggctatc caacagtccg tagcgggcga acgatgcctc gacctcaggt
     1741 cgcgaaacgg ccagtgcctc cacctcggag aggtctactc ccttgtctg
//
LOCUS       DASCMR010000135         7138 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000668455, whole genome shotgun sequence.
ACCESSION   DASCMR010000135 DASCMR010000000
VERSION     DASCMR010000135.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 7138)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7138)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7138
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000668455"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(39..1442)
                     /gene="sufB"
                     /locus_tag="QGG16_03330"
     CDS             complement(39..1442)
                     /gene="sufB"
                     /locus_tag="QGG16_03330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015797999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HJP24342.1"
                     /translation="MSATDLGLDLSRYKLGWSDEEDYVYKPTKGVDENVIKEMSWMKG
                     EPEWMRDFRLKSFQRFGNRPMPWWGGDMSGIDFDDIYYYIKPTESLSDDWDDVPESIK
                     NTYEKLGIPEAERKYLAGVTAQYESEVVYHRNREDLEEQGVIFCDMDTALREHPEVVR
                     AYFGRIIPPNDNKFSALNSAVWSGGSFIYVPPGVKVDMPLQAYFRINAENMGQFERTL
                     IIADEGSEVHYIEGCSAPVYTTDSLHSAVVEIVVKPSARVTYTTIQNWSSNVYNLVTK
                     RARVEAEGHMEWIDGNIGSRLTMKYPAVVLAGPKASGEVLSVAYAGPGQHQDAGAKMT
                     HAAPETTSKIVSKSISKDGGRTSYRGLVRVEDDAYGCKSHVQCDALILDDDSISDTYP
                     YMEVGSADAVIGHEATVSKVADDQLFYLMSRGLTEEQAMSMVVNGFIEPVPRTLPMEY
                     AVEWSRLIELQMEGSVG"
     gene            complement(1564..2379)
                     /locus_tag="QGG16_03335"
     CDS             complement(1564..2379)
                     /locus_tag="QGG16_03335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24343.1"
                     /translation="MSSAGDAAASGVDGFDNHRFPSGDLTLAAHVTRPIGNGSGSGGV
                     ALPGVVICHGFPSGPDGGANSVATFPELAFRIATEMGWVAMVPYLRGMPGSDGDFSLD
                     GWRDDVVAAAADLRSQTGVERVWVVGFGSGAALAICAAAVDDGISGVGALAAPADWSD
                     WAANPRRLLLHARDAGLLTMSDSPPDFNRWSGALRELSAERSVSALAPRDLLLVHGGD
                     DEIVPPLDARVVAGAHGAADLRIIAGAGHHLRHDPRAIAILLGWLDRQRRHHT"
     gene            complement(2385..2903)
                     /locus_tag="QGG16_03340"
     CDS             complement(2385..2903)
                     /locus_tag="QGG16_03340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HJP24344.1"
                     /translation="MAIYALGDRVPVIDPTAYVHPLAAVIGSVELGPGASVWPHAVIR
                     ADDNLIRIGARTSVQDNAVLHCTSHLPTIVGEDVTLGHLCHLEGCTIEDRALVGVGAV
                     VLHEAVIGRGSIVGANAMVRNGQIVPPLSMALGVPAAVREGVVPEDANMINAEVYVQR
                     GREFRDTLRRLD"
     gene            complement(2903..3418)
                     /locus_tag="QGG16_03345"
     CDS             complement(2903..3418)
                     /locus_tag="QGG16_03345"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HJP24345.1"
                     /translation="MADENPSGTLNEIDGDLYRKVLGRYPTGVTLVTAMDGDEPLAMV
                     IGSFVSVSMDPPLVGFLPGKESYTWGRMSSSDGFCVNVLSDAQADLSNAFFRKDGDPW
                     EGTGWQPAEMTGSPAIPSCLASIDCAVHEVVDAGDHWFVMGRVVGVSHVDEGSPLVFL
                     GGKYGEYRAQG"
     gene            complement(3473..4360)
                     /locus_tag="QGG16_03350"
     CDS             complement(3473..4360)
                     /locus_tag="QGG16_03350"
                     /inference="COORDINATES: protein motif:HMM:NF024118.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HJP24346.1"
                     /translation="MGESLDVTFFGVRGSTPCPCDDNRRYGGNTSCVVLDVPGGEPII
                     FDLGTGLRFYGVDERCGSGPFRATALVSHLHWDHVQGLPFFAPLHCPDTRLDVFGPGE
                     EGSTLEQSFDMFMTPPFFPICYRELVGRVSLNDTPEGGFDVGSARVTARPVPHVGRTL
                     GYRVDWNGLSVAYISDHQQPIDDPTGVDHQVLALADGVDLLIHDAQFTPEEFAERPHW
                     GHCTVDYAIEVAHQAGVGELVLFHHDPAHDDDHIDRLLAGARDRSVGLDVDHVSAAVE
                     GRTISLVPSDDTLAAATPR"
     gene            4462..4839
                     /locus_tag="QGG16_03355"
     CDS             4462..4839
                     /locus_tag="QGG16_03355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24347.1"
                     /translation="MAMEPSPNGSQVQNPGSLPDGLIAVVKAGCPACALARPVFVDLA
                     ERADLTVYTQDDPTFPTEADWVVDDTDLAISWGLDLDAVPTLLRIEGGVETARTTGWD
                     RDRWEEFTGVSNLGPDLPPFKPG"
     gene            4846..5937
                     /locus_tag="QGG16_03360"
     CDS             4846..5937
                     /locus_tag="QGG16_03360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HJP24348.1"
                     /translation="MTVDPGRIDALRARYDGWGLTSRRVEVGSLEDEAEAMFDRGWTD
                     GLPIVAPTEARVARMLDGTTRSPGDIVALMPPALVECTVEKVAVNAVMAGCRPEYLPV
                     VLAALEAICTDGFNMHGVLATTMGVGPVFVVNGPIAQRIGMNAGINVLGHGNRANLTI
                     GRAVQLVVRNVGGGRPGEIDRATHGSPAKLSFCFAEDEATSPWTTLAEDRGFARSTDV
                     VTAFCGEAPRIVVDQRSRTADSLVRSLADGLRSAVSSRVVAGMDAMLVVSPEHLSRFS
                     DAGWDRARFMEELGAHLMVDTDTIVIGAGGIEEGLPEAMAGLTLPKFRPGGLLVVHAG
                     GPAGLFSSIVGGWLNGPMGSEPTSREITP"
     gene            6003..6530
                     /locus_tag="QGG16_03365"
     CDS             6003..6530
                     /locus_tag="QGG16_03365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_273701377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:6270..6272,aa:Sec)
                     /transl_table=11
                     /product="UGSC family (seleno)protein"
                     /protein_id="HJP24349.1"
                     /translation="MLLDPTSEAESTNRTLTARKPSLDGLTIGLLDINKPRGDVFLDR
                     LEQQLGRRGATVLRFAKPTFTKPAPADLRHEIATQCDAVIEALADUGSCTTCSVHDID
                     DLERRGLPGVVIASEPFRDAAAAQSRALGLEVATVFTPHPIQDRTDEEMHAMADALVG
                     TVVNAITADANTDHQ"
     gene            complement(6499..>7138)
                     /locus_tag="QGG16_03370"
     CDS             complement(6499..>7138)
                     /locus_tag="QGG16_03370"
                     /inference="COORDINATES: protein motif:HMM:NF012840.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HJP24350.1"
                     /translation="AEWSGLGYNRRAVYLHRAATAVVDRHGGQVPGNLADLLDLPGIG
                     PYTARAVLAFADEADVGIVDTNVARVLARWSGRELSPREVQERADASVPAGSGWAWNQ
                     TVLDLGATVCRARNPTCDDCPLSDGCVWRGEGIDPAIGSAGVSGRQATFEGSDREGRG
                     RLVAALAENPVDDDGLATAMGWPDDPQRAERVAARLVLDGLVVTDGRCWHLP"
BASE COUNT         1251 a         2418 c         2284 g         1185 t
ORIGIN      
        1 ggccgcccgt caggcgcgag ggccctcaac aaagtaggtc agccgaccga gccctccatc
       61 tgcagttcga tcaggcggct ccactccacc gcgtactcca tgggcaacgt tcgggggact
      121 ggttcgatga agccgttgac gaccatggac atggcctgct cctcggtcag cccccggctc
      181 atcaggtaga agagttggtc gtcggccacc ttggacaccg tcgcctcgtg gccgatcacc
      241 gcgtcggctg aaccgacctc catgtagggg taggtgtcgg aaatactgtc gtcgtcgagg
      301 atgagtgcat cgcactggac gtggctcttg cagccgtagg cgtcgtcctc cacccgcact
      361 aggcctctgt agctcgtccg accaccgtcc ttggagatcg acttggacac gatcttggat
      421 gtggtctccg gtgcggcgtg agtcatcttg gcccccgcgt cctgatgctg tcccgggccg
      481 gcgtaggcca ccgacaacac ctcgcccgag gccttcgggc cggccaggac cacggccggg
      541 tacttcatgg tcaggcggga tccgatgttg ccgtcgatcc actccatgtg gccctcagcc
      601 tccactcggg cccgcttggt gaccaggttg tagacgttgg acgaccagtt ctggatggtg
      661 gtgtaagtga ctcgagccga cggcttgacg acgatctcca ccacggctga atggagagaa
      721 tccgtggtgt aaaccggcgc cgagcagccc tcgatgtagt gcacctccga accctcgtcg
      781 gcgatgatca gcgtcctctc gaactggccc atgttttccg cgttgattcg gaagtaggcc
      841 tgcaacggca tgtcgacctt gacgccgggt ggaacgtaga tgaacgaacc gccgctccac
      901 accgcggagt tgagcgccga gaacttgttg tcattgggcg ggatgatccg accgaagtag
      961 gcccgcacga cctccgggtg ctcacgcagg gcggtgtcca tgtcgcagaa gatcacgccc
     1021 tgttcctcta ggtcctcgcg gttgcggtgg tacaccacct cggactcgta ctgggctgtc
     1081 acgccggcca ggtacttccg ttcggcctcc ggaataccta acttctcata ggtgttcttg
     1141 atcgactcgg ggacgtcgtc ccagtcgtcg ctgagcgact cggtgggctt gatgtagtag
     1201 tagatgtcgt caaagtcgat ccccgacatg tcgccgcccc accagggcat gggcctgttt
     1261 ccgaaccgct ggaacgactt gagacggaag tcccgcatcc actccggctc gcccttcatc
     1321 catgacattt ccttgatgac gttctcgtcg acgcccttgg tgggcttgta gacgtagtcc
     1381 tcctcgtcgc tccagccaag cttgtagcgg ctgaggtcga ggcccagatc ggtggcggac
     1441 atcggcggga ctcctgttgc cagtggcagt cgggggttga cggatgggaa gacggggatt
     1501 tcccctatgt agatagtaac aatcccctga accgttcaga agggcatcgg ccatcggaac
     1561 ggttcaggtg tggtggcgac gctgccgatc caaccagccc agcaggatgg cgatggccct
     1621 cggatcgtgc cgcaggtggt gtcctgcccc ggcgataatc cggagatcgg ccgctccatg
     1681 ggccccggcc accacccggg cgtccagcgg tggaacgatc tcatcgtcac caccgtggac
     1741 cagcaggaga tcgcgcggcg ccagggccga cacggaccgc tcagccgaca gctcccgaag
     1801 cgcacccgac catcgattga agtcgggcgg ggagtcggac atggtcagaa gtccagcgtc
     1861 acgagcgtgt aggagcagcc ggcgcgggtt ggccgcccag tccgaccagt cggctggtgc
     1921 agccagtgca ccaaccccgc tgatcccgtc atcgacggcc gccgcacaga tggccagcgc
     1981 ggccccactg ccgaacccca cgacccacac cctctccacg ccggtctgac tcctgaggtc
     2041 ggcggcggcg gccaccacgt cgtcacgcca accgtcgagg ctgaagtcgc cgtcggaccc
     2101 gggcattccc cgtaggtagg gaaccatggc cacccatccc atctccgtag cgatccggaa
     2161 ggccaattcc ggaaaagtgg ctaccgagtt cgctccaccg tcgggtccgc tgggaaaccc
     2221 gtggcagatc acgacgccgg gcagggccac tccaccggac cccgacccgt tcccgattgg
     2281 gcgggtgaca tgggcagcca gcgtcaggtc cccggacggg aaccggtggt tatcgaaccc
     2341 gtcgaccccg gaggccgcgg catcgcccgc ggaggacacg acggtcaatc caatcggcgg
     2401 agggtgtcgc ggaactcccg gccccgctgc acgtacacct cagcgttaat catgttggcg
     2461 tcctcgggaa ccacaccttc ccggacggca gccggcacac ccagggccat cgataggggc
     2521 ggcacgatct gaccgttgcg caccatcgca ttggctccga cgatcgaacc ccggccgatc
     2581 actgcctcgt gcaggaccac ggcccccact ccgaccagcg cccggtcctc gatggtgcac
     2641 ccctcgaggt ggcacaggtg acccagggtc acgtcctcgc cgacgatggt cggcaggtgg
     2701 ctagtgcagt gcagtaccgc gttgtcctgg accgacgtcc gggctccgat ccgaatcagg
     2761 ttgtcatcgg cccggatgac cgcgtggggc cacacgctcg caccggggcc caactcgacg
     2821 ctgccgatca ccgcggccaa cggatggacg taggccgtcg gatcgatcac cgggacgcgg
     2881 tcaccgagcg cgtagatcgc catcagccct gcgcccggta ctcgccgtac tttcctccga
     2941 ggaagaccag cggcgaaccc tcgtcgacgt gggacacccc gaccacgcgt cccattacga
     3001 accagtggtc accggcgtcg accacctcat gtacggcaca gtcgatggac gccagacatg
     3061 aggggatggc cggcgatccg gtcatctcgg ctggctgcca ccctgtgccc tcccaggggt
     3121 cgccgtcctt gcggaagaag gcgttggaca gatcggcctg tgcgtcggac agcacgttga
     3181 cgcagaagcc atctgatgac gacattcgtc cccacgtgta ggactccttg ccgggtagaa
     3241 agcccacgag cggagggtcc atcgacaccg acacgaatga accgatcacc atggcaaggg
     3301 gctcgtctcc atccatggcc gtcaccagcg tgacgcccgt cgggtaacgg cccagcacct
     3361 tgcggtatag gtcgccgtcg atctcgttca gggttccgct cgggttctcg tcagccacgg
     3421 ggctcttcct ctgtcgttgc ccgccgatga ccggcgaggt cggggaccga acctagcggg
     3481 gagtcgccgc tgccaacgtg tcgtcggacg gcaccagtga gatcgtgcga ccctcgacag
     3541 cagcagagac atggtctacg tcgagtccga cagaacgatc acgcgcccca gccagcagac
     3601 ggtcgatgtg gtcgtcgtcg tgggccgggt cgtggtggaa gagaaccaac tcgccgaccc
     3661 ccgcctgatg ggctacctcg atggcgtagt ccacggtgca gtgcccccag tgggggcgtt
     3721 ccgcgaactc ctccggggtg aactgggcgt cgtggatcaa caggtccacg ccgtcagcca
     3781 gggccagcac ctggtggtcg acaccagtcg gatcgtcgat gggctgctgg tggtcgctta
     3841 tgtaggccac gctgagcccg ttccagtcga cccgatagcc cagcgttcgg ccgacgtggg
     3901 gcaccggtcg ggcggtcacc cttgccgaac cgacgtcgaa gcctccctct ggtgtgtcgt
     3961 tgagcgacac ccgcccgacc aactcccggt aacagatcgg aaagaatggg ggtgtcatga
     4021 acatgtcgaa cgactgctcg agcgtgcttc cctcctcgcc cggcccgaac acgtcgagtc
     4081 gggtatccgg gcagtgcaag ggagcgaaga agggaagtcc ctggacgtgg tcccagtgga
     4141 ggtggcttac cagcgctgtg gcccggaagg ggcctgaacc gcaacgctcg tcgacgccgt
     4201 agaaccgaag gccggtaccc aggtcgaaga tgatcggctc gccaccgggg acgtcgagaa
     4261 ccacacacga ggtgttcccc ccgtagcgcc gattgtcatc acacgggcac ggggtggaac
     4321 cccggactcc gaagaacgtg acgtcgagtg attcccccat cggtgaccaa gggtagggaa
     4381 gcctccccgc tcgacgggga aaatgtgacg catctctcag ccggctcggt gtgacattgg
     4441 aaacggtgcg aaactcggcc catggccatg gaaccctctc ccaatgggtc acaggtccaa
     4501 aatcccgggt cgcttccaga cgggctgatc gccgtcgtta aggccggctg tccggcctgt
     4561 gcactggccc ggccggtgtt cgtcgatctc gctgaacggg ccgacctgac cgtttacacc
     4621 caggacgatc cgaccttccc caccgaggct gactgggtcg tcgacgacac cgacctggcc
     4681 atcagctggg gcctggacct cgacgccgtc cccaccctcc tgagaattga aggtggtgtg
     4741 gagacggcgc gaaccaccgg ttgggaccgc gaccggtggg aggagttcac cggcgtgagc
     4801 aacctcggcc cggacctgcc gcccttcaaa cccggttgag ggtcattgac ggtcgatccc
     4861 gggcggatcg acgcactgcg ggcccgctac gacggctggg gcctgacgtc gcgtcgggtg
     4921 gaggtgggct ccctcgagga tgaggcggag gccatgttcg accgggggtg gaccgacggc
     4981 cttcccatcg tcgccccgac cgaggcgcgg gtagcccgga tgctcgacgg cacgacccgt
     5041 tcgcccggcg acatcgtggc gctcatgccc ccggcactcg tcgagtgcac ggtcgagaag
     5101 gtggccgtga acgcggtgat ggccggctgc cgtccggagt acctcccggt ggtgctggca
     5161 gccctggagg ccatctgtac tgacgggttc aacatgcacg gcgtgttggc caccacgatg
     5221 ggcgttggac cagtgttcgt cgtcaacggg cccattgccc aacgaatcgg catgaacgcc
     5281 ggcatcaacg tcctgggcca tggaaaccgg gccaacctga ccatcggacg ggccgtccag
     5341 ctggttgtac gcaacgtggg gggcggtcga cccggagaga tcgaccgggc cacccacggg
     5401 agcccggcca agctgtcttt ctgcttcgcc gaggacgagg ccaccagccc ctggaccacg
     5461 ttggccgagg atcggggctt cgcccggtca accgacgtgg tgaccgcctt ctgtggcgaa
     5521 gctccccgga tcgtcgttga ccagcgcagc cggacggccg attcgctggt tcgctcactg
     5581 gccgacggtc tgcgatcggc agtgtcttcg agagtggtgg ccggcatgga cgccatgctt
     5641 gtggtgtcgc ccgagcacct atcccgattc agtgatgcag gttgggaccg ggcacggttc
     5701 atggaggaac tgggcgccca cctgatggtc gacacggaca ccatcgtgat cggcgccggc
     5761 ggcatcgagg agggccttcc cgaagccatg gccggcctga ccctcccaaa gtttcgtccc
     5821 ggggggctgc ttgtcgtcca cgccggcggt ccggccggcc tgttctcctc gatcgtggga
     5881 ggctggttga acggcccaat gggaagcgaa ccaaccagca gggagatcac accgtgagcg
     5941 acaccgaccc gtcaccgacg accgggcacc atccggatgt cgcgaagcac gcaggggcgg
     6001 tgatgctcct ggatccgacc tccgaggccg aatcgaccaa tcggaccctc accgcccgga
     6061 aaccctcgct agacggcctc accattggtc tactggacat caacaagcca cgaggcgacg
     6121 tgttcctcga tcgactcgag cagcagttgg ggcgccgtgg ggccaccgtg ctgcgtttcg
     6181 ccaagccgac cttcaccaag ccagcgcccg ccgacctacg ccacgagatc gccactcagt
     6241 gcgacgcggt gatcgaagca ctcgctgatt gaggctcctg cacgacgtgc agtgtgcacg
     6301 acatcgacga tctggaacgg cgagggcttc ccggggtagt gattgcctcg gaaccgttca
     6361 gggatgccgc tgcggcccag tcccgcgcac tggggctcga ggtggccacc gtgttcaccc
     6421 cccatccgat ccaggatcgg accgacgagg agatgcacgc catggctgac gcgctcgtcg
     6481 gcaccgtggt gaacgccatc acggcagatg ccaacaccga ccatcagtga cgacgaggcc
     6541 gtcgagcacc aaccgggctg ccacccgctc agccctctgg ggatcgtcgg gccatcccat
     6601 tgccgtagcc aggccgtcgt cgtctaccgg gttctcggcc aatgcggcca ccaaccgacc
     6661 acgcccctcc cgatcagacc cttcaaaggt cgcctgtcgc cccgagaccc ctgctgaccc
     6721 gatggcggga tcgatgccct ctcccctcca gacgcagcca tcactgagcg gacagtcgtc
     6781 acaagtgggg tttcgagccc gacagacagt tgcaccgaga tccagcacgg tctggttcca
     6841 ggcccaaccg gatccagctg ggaccgacgc gtcggcccgt tcctgaacct cgcgaggact
     6901 gagttcccga cccgaccacc gagccagcac ccgggccacg ttggtgtcaa cgatgcccac
     6961 gtcggcctca tcggcaaatg ccagcaccgc tcgcgccgtg tagggcccga tcccgggtag
     7021 gtccagcaga tctgccaggt tcccgggcac ctgacccccg tggcggtcga cgaccgcggt
     7081 agctgcccga tggaggtaca cggcccgccg gttgtatccc agccccgacc actcggcg
//
LOCUS       DASCMR010000136         8729 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000671464, whole genome shotgun sequence.
ACCESSION   DASCMR010000136 DASCMR010000000
VERSION     DASCMR010000136.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 8729)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8729)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8729
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000671464"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            173..883
                     /locus_tag="QGG16_03375"
     CDS             173..883
                     /locus_tag="QGG16_03375"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012521.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HJP24351.1"
                     /translation="MHVILVRHGRPEIVVDSPTIADPSLDEIGRWQAERLTAWLACEE
                     IDAVITSPKARAIQTAAGTVEGLGITPRVVNDLDEIDRGAHTYLPTELLPTQGGAYWD
                     QICEKRYDEIGWDSPEAFRDRVVATWDDLCRNPPGERVLVACHGGTIRTILAHVAGND
                     GAGFRLDYTSISRVEVTPPGGDPSGEDGPTDPYCSVASANEVAHFDAERTAVVGAFRG
                     AERPGTTFNRRPLSAPTS"
     gene            complement(908..2203)
                     /locus_tag="QGG16_03380"
     CDS             complement(908..2203)
                     /locus_tag="QGG16_03380"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HJP24352.1"
                     /translation="MGMIRTLRAVVRLRRPVGDRTARRLRGAANVDDLREMARRRLPA
                     GVFDYIDGGAEDELTLDRNVQAFQEMTFRPRVLQGLDELDTSTTLLGRPLAFPLVLAP
                     TGFTRIADPAGELAVVRAAGRAGIPFTLSTMGTRSIDECAAVAGPGARLWFQVYAWRD
                     RNLIRALLDRAAAAGFEAICLTVDTAMLGRRERDVRRGLTLPPEIGPGTFLDGIRRPG
                     WTWRFLRSDPIRFANVEGLANDGAGARPGEITETGGAPGAGERAVDLAGYMNAQFDHG
                     LSWDDVAWLRTVWDGPILVKGIQSVVDAVLAVEHGVEGIILSNHGGRQLDTAPAPFDL
                     VPSVASAVATAVAEAGTGRIEVICDGGIRRGSDIVKAVAAGADATMGGRLFLYALAAA
                     GEQGVDHVLELLRSGTERTMALVGASTVDQLGPDLLESR"
     gene            complement(2227..2502)
                     /locus_tag="QGG16_03385"
     CDS             complement(2227..2502)
                     /locus_tag="QGG16_03385"
                     /inference="COORDINATES: protein motif:HMM:NF022683.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3039 domain-containing protein"
                     /protein_id="HJP24353.1"
                     /translation="MHTLQFAVLSDLETITPVDPLLDDPILDDGDHDRFSHYARKSDI
                     VESAVTGKPVVALCGKVWVPGRDPDRFSVCPTCREIYEKRKADEMGG"
     gene            complement(2515..2979)
                     /gene="rpiB"
                     /locus_tag="QGG16_03390"
     CDS             complement(2515..2979)
                     /gene="rpiB"
                     /locus_tag="QGG16_03390"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HJP24354.1"
                     /translation="MATIAVGSDHAGYALKEQLAGELRDLGHEVLDLGAHSSERVDYP
                     DFGAAVGRAVVGGDAELGLCVCGSGIGIAMAANKVPGVRAATVHDVTSARLTRQHNDA
                     NVICLGERLIEPEVASETLRAWLDAEFEGGRHTGRIDKLSDLDGSLDRHAAD"
     gene            complement(2989..3618)
                     /locus_tag="QGG16_03395"
     CDS             complement(2989..3618)
                     /locus_tag="QGG16_03395"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: protein motif:HMM:TIGR00057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0061710 - L-threonylcarbamoyladenylate
                     synthase [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase"
                     /protein_id="HJP24355.1"
                     /translation="MILDVSTDPAGAVDAAVACLRAGGVVVLPTETVYGVAALADDSS
                     AVAELFVRKGRPTDRRVAVLVADLDQARSLAVVDERTIALAEVAWPGPLTMVLPTVPG
                     SDEATVGVRCPDHALVQAVATSVGPIATTSANRSGDPTPADAASAAASLGGDLLVLDG
                     GRCTGMPSTVVDLTVDPAVILREGTVTVADLEAAGIRVEPGSAGPGDDR"
     gene            complement(3649..4560)
                     /gene="prmC"
                     /locus_tag="QGG16_03400"
     CDS             complement(3649..4560)
                     /gene="prmC"
                     /locus_tag="QGG16_03400"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: protein motif:HMM:TIGR03534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HJP24356.1"
                     /translation="MPPDEGTISWREVLAETEGRLLAAGHDAGSAVRESRWIVEEAFG
                     VLGVSRAMSPAEMEALVTVRGMAHHDAMVERRLAGEPLQYVLGRWPFRTLDLMVDKRV
                     LIPRPETEVVAGLVLDEVDRFAVGRDLSSEPVLVADLGTGSGAIGLSVAVERVGARVW
                     CTDASSDALAVARANCVGLGRPAQRVTLAEGSWFDALPVDLWGRFDVIASNPPYVARD
                     DGLPSEVADWEPDAALYADDQGTADVRVLIEEAPGWLAPGGSLVLEMAPDQIGVMADL
                     ARSSGFVDVVVYRDLADRDRALVARRP"
     gene            complement(4550..5638)
                     /gene="prfA"
                     /locus_tag="QGG16_03405"
     CDS             complement(4550..5638)
                     /gene="prfA"
                     /locus_tag="QGG16_03405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HJP24357.1"
                     /translation="MLDQVEALEAEYSEVESRLADPEVISDSDRLQAAGRRFKELDEV
                     LAVGRPLAIAHGDLETARELADMADGDDRDQLRVEIAELEREIDRLEGELRTLLLPRD
                     PNDGRPVILEIRGAEGGEEANLFARDLHEMYLAFATIHGWKIELLEARESDMGGFSEV
                     MVLVKGDDAWTRLKYEGGVHRVQRVPVTESQGRIHTSSATVSVLPEADEVEVELDEND
                     LQVDVYRASGPGGQSVNTTDSAVRLTHKPTGLVVSMQDEKSQLQNKTKALRVLRSRLL
                     QIEQERQMSEASEARRGQIGSGGRSEKVRTYNFKENRVTDHRIGLTLHKLDRILAGEL
                     DDVTDGLLADERTRQLAAGLEDGPAGAA"
     gene            complement(5692..6741)
                     /locus_tag="QGG16_03410"
     CDS             complement(5692..6741)
                     /locus_tag="QGG16_03410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24358.1"
                     /translation="MALDPERRTALRGAKLRALVAEATDGASVPEPDGDHLFDGTRLW
                     TLASEDEPGSALGVGLLRAGRHGDATPLTVCFDDAFEAALAARWVAALEPTPEVRHVD
                     GRLLVTVAPADEPNPTTDRSPEGFAVEFDDLCRGVGVEPILEHGTWRGEVLGLEVVRA
                     VDGIDPMAGELEGGRSDGLSDARPMIEVGVGRFDREAGVLMRAGRSDAEALAAAADLV
                     RAQRRPGAGAHPLATLARERWMRRDLCAHPELLDLVNLVPVDPAIERLNLRDPAPAPA
                     VGSDADRGRVLVICSVGVDPHLVSAAAELVLREVPDRVVVALPTRDVMTPVKRVMARL
                     RVPTTVVGVACSWDA"
     gene            complement(6808..7062)
                     /locus_tag="QGG16_03415"
     CDS             complement(6808..7062)
                     /locus_tag="QGG16_03415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HJP24359.1"
                     /translation="MKQDIHPNYRPVVFQDLSEGTNFVIRSTVETDDVITLDDGVEYP
                     LVKVEISSASHPFFTGTMKIVDTAGRVERFERRYGQRRKG"
     gene            complement(7158..>8729)
                     /gene="rho"
                     /locus_tag="QGG16_03420"
     CDS             complement(7158..>8729)
                     /gene="rho"
                     /locus_tag="QGG16_03420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015799202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0008186 - ATP-dependent activity, acting
                     on RNA [Evidence IEA];
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HJP24360.1"
                     /translation="SNGGRPPTVATEPVAPAEESAEEPLAEWEVAAEAEEAAGTDGDQ
                     SADSDASAEANAETSTEADADRSGDQKSDRDGGRGQGGQNRDRQGGHNRDRQGGQNRD
                     RQGGHNRDGQGDTADPGNRRRRRRGRERDQSSGPEEVWDGEPVEVEGHIDLRDEGYGF
                     LRTGGYKPSKKDAYISVKQVRQFSLRRGDHLVGASRPANRSEKNPALLRIDKVNGRDP
                     ELAKSRPKFEDLTPLFPDEKLRMEVDGDPTNMTARIIDLLSPIGKGQRGMIVSPPKAG
                     KTTIMKSIVRSIETNHPEVKLIVLLVDERPEEVTDMKRWLQRGEVVGSTFDRPSDEHT
                     QLAEVTIERAKRMVEYGDDVVIVLDGITRLSRAYNLAAPATGRIMSGGVDSGALYPPK
                     RFFGAARNLEEGGSLTVLATALVDTGSKMDEVIFEEFKGTGNMELRLDRRIAERRIYP
                     AIDVDASSTRHEELLFERQQLNQVWKLRRVLNGLANDGSGAAAGLELLIDRLKTFNNN
                     EEFLVEIAKGPSMGD"
BASE COUNT         1470 a         3136 c         2747 g         1376 t
ORIGIN      
        1 ccatgatcca actcatgaca gtgtcactgg ccgcccgggc cggtgagatg gaacaccgac
       61 ggccccacct cgattccaca gcctacgagc ggcacctggt cgacgtcctg accggtgtgc
      121 tcactgcgcc cagcacctaa accgctccac gtgtccggta ccgtcgcccg ccgtgcacgt
      181 catcctcgtc cgacacggac gccccgagat cgtcgtcgac tcccccacca ttgccgaccc
      241 cagtctggac gaaatcggtc gatggcaggc cgaacgcctt accgcgtggc tggcgtgcga
      301 ggagattgac gcggtaatca ccagccccaa ggcccgagcc atccagacgg cggccgggac
      361 ggtcgagggg ctcggcatta ccccccgggt cgtcaacgac ctcgacgaga tcgaccgcgg
      421 cgcccacacc tacctaccca ccgaactgct gcccacccag ggcggcgcgt actgggacca
      481 gatctgcgag aagcggtacg acgagatcgg gtgggactcc cccgaggcgt tccgcgaccg
      541 ggtggtagcc acctgggacg acctctgccg caacccgccg ggcgaacggg tgctggtggc
      601 ctgccatggc gggacgatcc gtaccatcct cgcccatgtc gccggcaatg acggcgccgg
      661 ctttcgcctc gactacacgt caatcagccg ggtcgaggtc acgccgccgg gtggcgaccc
      721 ctccggcgag gacggcccca ccgacccgta ctgctcggtg gccagcgcca acgaggtcgc
      781 ccatttcgac gcggagcgca ccgcagtggt gggtgccttc cggggcgccg aacgcccggg
      841 caccaccttc aaccgtcggc cactgtccgc tcccacttcc tgaacagcaa ccgggtagga
      901 gctttcctca gcgggactcc aacagatccg ggcccagttg gtcgaccgtg gaggccccca
      961 cgagggccat ggtgcgttcg gtgcccgagc ggagcaactc cagaacatgg tccacgccct
     1021 gctcgccggc cgccgccaac gcatagagga agaggcgccc acccatcgtg gcgtcggcgc
     1081 cggcagccac cgccttgacg atgtcggacc cccgacggat acctccgtcg cagatcacct
     1141 cgatccgacc agttcccgct tcagctaccg cggtggccac tgcactggcc accgatggca
     1201 ccagatcaaa gggtgctggg gccgtgtcga gctggcgtcc accatggttc gacaggatga
     1261 tcccctccac cccgtgttcg acggccagca cggcgtcgac caccgactgg atgcccttca
     1321 cgaggatcgg cccgtcccag acggtgcgca gccacgccac gtcgtcccaa gacaggccat
     1381 ggtcgaactg ggcgttcatg tacccggcca ggtccaccgc cctctcgccg gctcccgggg
     1441 caccccccgt ttcggtgatc tcgccgggcc gagcgccggc cccatcgttg gccagcccct
     1501 ccacgttggc gaaccggatc ggatcggatc ggaggaaacg ccacgtccaa cccggacggc
     1561 gtatcccgtc cagaaaggtc ccgggcccga tctccggtgg caaggtcagg ccccgccgga
     1621 catcacgctc ccgtcgaccc agcatggccg tgtcgactgt caggcagatg gcctcgaagc
     1681 cggccgccgc ggcgcggtcc aacagggccc ggatgaggtt gcggtcgcgc caggcgtaca
     1741 cctgaaacca caaccgggca cccggtccgg ccaccgccgc acactcgtca attgatcggg
     1801 tccccatggt cgagagggtg aacggaatgc cggcccgccc ggcagcccgg accacggcca
     1861 gctcgccagc cggatcggcg atgcgggtga atccggtggg cgccaacacc agcgggaagg
     1921 ccagcgggcg ccccaacaac gtggtcgagg tatccaactc gtcgagaccc tgcagtaccc
     1981 gcggccgaaa cgtcatctcc tggaaggcct ggacgttgcg gtccagcgtc agctcgtcct
     2041 cggccccgcc gtcgatgtag tcgaatacac cggccgggag acgacggcgg gccatctccc
     2101 gtaggtcgtc gacattggcg gcaccccgca ggcgtcgggc cgtccgatcg cccaccgggc
     2161 gacgcaagcg caccacggct cgcaacgttc ggatcatgcc catgggagga actgtcgaga
     2221 ggggcgtcag ccgcccatct cgtcggcctt tcgcttctcg tagatctccc ggcacgttgg
     2281 acagaccgaa aagcggtccg gatcacggcc tggcacccag acctttccgc acagggccac
     2341 caccggctta ccggtcaccg ccgactcgac gatgtcggac ttgcgggcgt agtgcgagaa
     2401 ccggtcgtgg tcgccgtcgt cgaggatcgg atcgtctagg aggggatcga ccggggtgat
     2461 cgtctcgaga tccgagagga ccgcgaactg caaggtgtgc atcgaggtcg ccgatcagtc
     2521 cgcggcgtgc cggtcgagcg aaccgtcgag gtcggacagc ttgtcgatac gcccagtgtg
     2581 gcgaccgccc tcgaattcgg catccagcca ggcccggagg gtttcggatg ccacctcggg
     2641 ctcgatcagg cgttcgccga ggcaaatcac gttggcatca ttgtgctgac gtgtcaggcg
     2701 agccgacgtg acgtcatgca cggtcgcggc ccgaaccccg ggaaccttgt tggccgccat
     2761 ggcaatgccg atgccagacc cacacacgca caggcctagt tcggcgtcgc cgccgaccac
     2821 cgcccggccc accgctgcac cgaagtccgg gtaatcgacc cgctcggacg agtgggcgcc
     2881 caggtcgagc acctcgtggc cgagatctcg taactccccg gccaactgct ccttgagcgc
     2941 gtatccggcg tgatcggaac cgacggcaat ggtggccatg agtcgaggct agcggtcgtc
     3001 tccggggccg gccgatcccg gctctacccg gattccggcc gcctccagat cagcaacggt
     3061 gaccgtgccc tcccggagga tgaccgccgg atcgacggtc aggtcgacca ccgtggaggg
     3121 catcccggtg caccggccac cgtccagcac tagcaggtcc ccgcccagag atgcggccgc
     3181 cgatgcggca tcggcaggtg tggggtcgcc cgaccggttg gccgatgtgg tggcgatcgg
     3241 cccgacggac gtcgcgacgg cctgcaccag ggcatggtcg ggacaacgca cccccaccgt
     3301 ggcctcgtcg gatcccggaa ctgtcgggag caccatggtc aacgggcccg gccatgccac
     3361 ctcagccagc gcgatcgtac gctcatcgac aacggccagc gaccgggcct gatccaggtc
     3421 ggcgaccagc actgccaccc gtcgatcggt cggtcgaccc tttcgcacga atagttccgc
     3481 gacggccgag gaatcatcgg ctagggccgc cacgccatag acggtctcag tgggcagcac
     3541 caccacccca cccgcccgca gacacgccac cgcggcgtcc accgccccgg ccggatccgt
     3601 cgatacatcc agtatcacgg cgcgctcagc atcactgcgt gtccagcatc acggtcggcg
     3661 ggccaccagg gcccggtccc ggtccgccag gtcccgatag acgaccacgt cgacaaaccc
     3721 gctggaccgg gctaggtcgg ccattacacc gatctggtcg ggcgccatct ccaggaccag
     3781 cgagccaccg ggagccaacc agcctggagc ctcctcgatc aggactcgta cgtcggccgt
     3841 tccctgatcg tctgcgtaca gggcggcatc gggttcccaa tcggccacct ccgacggcag
     3901 cccgtcgtct ctggccacgt aaggcggatt ggatgcgatc acgtcgaacc ggccccacag
     3961 gtcaacaggc agggcgtcga accacgagcc ctcggccaga gtcacccgct gggccggacg
     4021 tcccagcccc acgcagttgg ctcgagccac ggccaacgca tcggacgagg catcggtgca
     4081 ccacacccgg gcacccaccc gttcgacagc caccgatagg ccaattgcgc ccgagccggt
     4141 gcccagatcg gcaaccagca ccggttcgga tgacaggtca cgccccacgg cgaaccggtc
     4201 cacctcgtcg agtaccagcc cggccaccac ttcggtctcg ggtcggggga tcagcacccg
     4261 cttgtccacc atcaagtcga gcgtgcgaaa cggccaacgc cctagaacgt attgcaacgg
     4321 ctcaccagcc agacgacgct ccaccatggc gtcgtggtgg gccatgcccc gcacggtgac
     4381 caacgcctcc atctccgctg gggacatcgc tcgcgaaacg cccaggacac cgaaagcctc
     4441 ctcgacaatc catcgggact cccgaacagc cgatccggca tcatggcccg ccgcgagcaa
     4501 ccggccctcg gtctcggcca acacctcacg ccacgagatg gttccctcgt caggcggcac
     4561 cagccggccc gtcctcgagg ccggcggcca actgtcgggt gcgttcgtcg gccaacagcc
     4621 cgtcggtcac atcgtccagt tcgcccgcca agatccgatc cagcttgtgg agggtcaggc
     4681 cgatgcggtg atcggtgacc cggttctcct tgaagttgta cgtccggacc ttctcggacc
     4741 gaccgccact gccgatctga ccccgccggg cttcggacgc ctccgacatc tggcgctcct
     4801 gctcgatctg gaggagccgg gaccgaagca cccgcaaggc cttggtcttg ttctggagct
     4861 ggctcttctc atcctgcatc gacacgacca gccccgtcgg cttgtgggtt agccggaccg
     4921 ccgagtcggt ggtgttgacc gactggccgc ccgggcccga cgcccgatac acgtcgacct
     4981 gcaggtcgtt ctcgtcgagc tccacctcta cctcgtcggc ctccggaagc acgctgaccg
     5041 tggccgacga tgtgtggatc cgcccctggg attcggtcac cggcacccgc tggacccggt
     5101 gcaccccgcc ctcgtacttg agacgggtcc aggcatcgtc acccttgacc aggaccatca
     5161 cctcgctgaa gccgcccatg tcggactctc gagcctccaa tagctcgatc ttccagccgt
     5221 ggatggtggc gaaggccaaa tacatctcgt ggaggtcgcg ggcgaacagg ttggcctcct
     5281 caccaccctc agcaccccga atctccaaga tgaccggacg gccgtcattg ggatcccgag
     5341 gtagcaggag ggtccgaagc tcgccctcca agcggtcgat ctcgcgttca agctcggcaa
     5401 tctcgaccct gagttggtcg cggtcgtctc catcggccat gtcggccagc tcgcgagccg
     5461 tctcgaggtc gccgtgggcg atcgccaacg gacggcccac ggccagcacc tcgtcgagtt
     5521 ccttgaaacg ccgaccagca gcctgcaggc ggtccgagtc actgatcacc tcagggtcgg
     5581 cgagtcgcga ctccacctcg gagtactcgg cttcgagggc ctcgacctga tccagcatca
     5641 ggtcaaggct agcgaggggc cccgagcgga ccccggaggc cggcctgttg gtcaggcatc
     5701 ccaactacag gccacaccta ccaccgtggt cgggacccgg aggcgggcca tcacccgctt
     5761 gaccggggtc atcacatcac gggttggaag ggccaccacg acccgatcgg gcacctcgcg
     5821 gagcaccagt tcggcggccg ccgaaacaag gtgggggtcg acccccaccg aacagataac
     5881 caggacccgg cctcggtcgg cgtcgctacc caccgccggg gcgggtgcgg ggtcacggag
     5941 gttcagacgc tcaatggccg gatccaccgg caccaggttg acgaggtcta gtagttcggg
     6001 gtgggcacac aagtctctcc gcatccaccg ttcccgagcc agggtggcca atggatgggc
     6061 accggcacca ggtcggcgct gggctcgcac caggtcggcc gccgcggcga gggcttcggc
     6121 atcggaacgt ccggcacgca tcagcacgcc ggcctcccgg tcaaaccggc ccacgcccac
     6181 ctcgatcatc ggacgagcat cggaaaggcc atctgaacgg cccccctcaa gctcaccggc
     6241 catcgggtcg atcccgtcaa ccgctcgcac gacctctagg cccagcacct cgccacgcca
     6301 cgtgccgtgt tccaggatcg gctccacccc gacgccgcgg cagagatcgt cgaactcgac
     6361 cgcgaagcct tcgggcgacc tgtccgttgt tggattgggt tcatcagccg gcgccaccgt
     6421 gaccagcaac cggccgtcga cgtgacgcac ctctggtgtc ggttccagtg cggccaccca
     6481 acgggccgcc agggcggcct cgaaggcatc gtcgaaacag acggtgagcg gcgtggcatc
     6541 gccatggcgg ccggcccgta gcagccccac accgagcgca gagccgggct cgtcctcaga
     6601 cgcaagggtc cagagccgtg tgccgtcgaa gaggtggtcg ccgtcaggtt ccgggaccga
     6661 cgccccatcg gtcgcttcag cgaccagggc gcgcaacttg gccccacgaa gggcggtgcg
     6721 acgctcggga tcgagggcca cgggtatccg gtcaggagtg ggcccggtcc acttcagcct
     6781 gctcggccga agcgaaccgt atggggctca gcccttgcgg cgctggccgt accggcgctc
     6841 gaagcgctcg acgcggccgg cggtgtccac gatcttcatc gtgccggtga agaacgggtg
     6901 gctggccgac gagatctcaa ccttgaccag cgggtactcc acgccgtcgt ccagggtgat
     6961 cacgtcgtcg gtctcaaccg tcgaacggat cacgaagttg gtgccctcgg aaaggtcctg
     7021 aaagaccacg gggcgatagt tcgggtggat gtcctgcttc ataactcgtc cagtctgcgg
     7081 tgcggtcggg ggttcggcaa cccgcgtgac gggtcgcctt tgggtatcag gttcgggtgt
     7141 cggatccgga tacccgttca gtcgcccatg ctcggtccct tggcgatctc gaccaggaac
     7201 tcttcgttgt tgttgaaggt cttgagtcgg tcgatgagaa gttctagacc ggccgccgca
     7261 ccgctgccgt cgttggccag gccgttgagc acccgccgca gcttccacac ctggttcagc
     7321 tgctggcgtt cgaacaggag ttcttcgtgc cgggtcgacg aggcgtccac gtcaatggcc
     7381 ggatagatcc ggcgttcggc aatccgacga tccagacgga gctccatatt gccggtgccc
     7441 ttgaactcct cgaagatcac ctcgtccatc ttggagcccg tgtcgaccag cgccgtggcc
     7501 aggacggtca gcgaaccgcc ctcctctagg ttccgagccg caccgaagaa ccgcttgggt
     7561 ggatagagcg caccgctgtc cacgccaccg gacatgatcc gaccggtagc cggggcagcc
     7621 aggttgtagg ccctggacag tcgggtgatc ccgtccaaga cgatcaccac gtcgtcgccg
     7681 tactccacca tgcgcttggc ccgctcgatg gtgacctcgg ccaactgggt gtgctcatcg
     7741 ctgggacgat cgaacgtgga tccaaccacc tcgccgcgct gcaaccagcg cttcatatcg
     7801 gtgacctcct cgggacgctc gtcgaccagc aggacgatga gcttcacctc gggatggttg
     7861 gtctctatgg accgcacgat cgacttcatg atcgtggtct ttcccgcctt ggggggagac
     7921 acgatcatgc cgcgctggcc cttgccgatc ggcgagagca ggtcgatgat gcgggccgtc
     7981 atgttggtcg gatcgccgtc gacctccatg cggagcttct cgtcggggaa cagcggggtg
     8041 agatcctcga acttgggtcg gctcttggcc aactcgggat ctcgtccgtt gactttgtcg
     8101 atacgcaaca gagccgggtt cttctcgctg cggttggccg gtcgggatgc accgaccagg
     8161 tggtctcccc ggcgcaggct gaactggcgg acctgcttga ccgagatgta ggcgtctttc
     8221 ttggacggct tgtagccgcc ggtccggagg aagccgtagc cctcgtcacg gaggtcaatg
     8281 tgaccctcga cctcgacggg ctcaccgtcc cagacctctt cggggccact cgactggtca
     8341 cgctcgcgac cccggcggcg gcggcggcgg ttacccgggt cggcggtgtc cccttgtccg
     8401 tcgcggttgt gaccaccctg acggtcacga ttctggccac cctgacggtc gcggttatga
     8461 ccaccctgac ggtcacgatt ctggccaccc tgaccacgac caccgtcacg atccgacttc
     8521 tggtcgccag agcggtcggc gtcggcttcc gtgctggttt ctgcgttggc ttctgcgctg
     8581 gcatccgagt cggcggactg gtcaccatcg gtgccagctg cctcctcggc ctcggcagcc
     8641 acctcccact cggccagcgg ctcctccgca gactcctcag caggtgccac aggctcggtg
     8701 gcaacggtag gaggccgtcc accgttgga
//
LOCUS       DASCMR010000137         2996 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000677108, whole genome shotgun sequence.
ACCESSION   DASCMR010000137 DASCMR010000000
VERSION     DASCMR010000137.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2996)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2996)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2996
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000677108"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..182)
                     /locus_tag="QGG16_03425"
     CDS             complement(<1..182)
                     /locus_tag="QGG16_03425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-eliminating lyase-related protein"
                     /protein_id="HJP24361.1"
                     /translation="MDLSPTSPDLSMASSVRADLRSDTVTQASAAMRDAMANAEVGDD
                     VYDEDPTVNALQDRLAA"
     gene            279..1187
                     /locus_tag="QGG16_03430"
     CDS             279..1187
                     /locus_tag="QGG16_03430"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012904.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HJP24362.1"
                     /translation="MGDTREALLPDGVVAPILTPFEADLSVSHRRMRAHAQSTLDAGC
                     VGLAVFGTTGEALSVASKEREAALEMLVDGGIDPGVLVVGTGLPDLPGTTRLTRHAVD
                     LGCRACMVLPPFYFKDPTDEGLYRHFAGLIERVNDHRLRVVLYHIPQVAGVGIPTAVA
                     ARLRTEFPEQVVGLKDSSGDWATTEAFLDIDGLTVWPGAELPLLDALDRGSPGCITAT
                     ANVNPGPVVEVVRQYGKGGREAAADAMGRARAYRLALQDQPAIPTMKRLLALAHDDPT
                     WATVRPPFVEMDEDEGRTLMDRLAAI"
     gene            1232..2281
                     /locus_tag="QGG16_03435"
     CDS             1232..2281
                     /locus_tag="QGG16_03435"
                     /inference="COORDINATES: protein motif:HMM:NF014045.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HJP24363.1"
                     /translation="MRPDENEERIAVFVDYENLAIGARQDLGIARFDFGPIARAMAER
                     GRVVYRRAYADWSGFDDDRRHLTRHQVELMEIPQRMGTSRKNSADIKMVVDALELAFE
                     RDFVTTIVICTGDSDFTPLVQKLRELDRRVIGIGVRNSTSKLLPPACDEFLYYDSLEG
                     VEAVIAASKAPKRKAPTGGRSSVESDDEPMAEAPPLEELVVSTLAGMQGSTEDVRAST
                     LKRAITRIDPTFNEADHGFRGFTELLRHLAGRKRVELSGEKRDPEVDLVTGDGPAQVG
                     FDLLVDVVAAKSKKGGAVLSGLKTEMNRRDETFNERALGYGGFLQFCKAAAARDLVVM
                     AWDDDRGDYLLTPAG"
     gene            complement(2312..>2996)
                     /locus_tag="QGG16_03440"
     CDS             complement(2312..>2996)
                     /locus_tag="QGG16_03440"
                     /inference="COORDINATES: protein motif:HMM:NF012296.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HJP24364.1"
                     /translation="IVAAAAQGRTDEPDSGIGDLLAYFTDLIERRRLEPGDDMVSQLI
                     AMGEDAVSILWILGFAFTMVTGGNDTTTGLLGGSTALLHQHPDQRRRLVDDPSMIPAA
                     VEELLRLTSPVQNLARTTTRDVELHGRFIPEGSKVLLSYGAANRDEREFGDDAELLDV
                     GRNPARILTFSYGAHHCLGAAAARLQGWVALEELLARFPDYVVDVDDMAYATGNYVRR
                     PLNLSFRSA"
BASE COUNT          497 a          958 c         1051 g          490 t
ORIGIN      
        1 gcagcgagcc ggtcctggag ggcgttgacc gtggggtcct cgtcgtagac gtcgtctccc
       61 acctcggcat tcgccatggc gtcacgcatg gcggccgatg cctgggtgac ggtgtcgctt
      121 cgcagatcgg cacggacgct gctagccatc gacagatctg gggaggtggg cgagaggtcc
      181 atcagcgcag gatacgcggc acctgtgcca cgatctgcgt tcgccagcca aacggcaggc
      241 cagctgaccg gcccgccaac caatgaaacg gggagacgat gggggataca cgagaggcat
      301 tgctgcccga tggggtggtg gcgcccatac tgaccccgtt cgaggctgac ctttcggtgt
      361 cacaccgccg gatgcgggcc catgcgcaga gcaccctcga cgccgggtgc gtgggcctgg
      421 ctgtcttcgg taccaccggt gaggcgctgt cggtggcctc taaggagcgg gaggccgctc
      481 tcgagatgct ggtggacggc gggattgacc cgggggtgct ggtggtgggc accggcctac
      541 ccgatctccc gggcactact cgcctgacca ggcatgccgt cgacctggga tgccgggcat
      601 gcatggtgct gccgcccttc tacttcaagg atccgaccga tgagggcctg tacaggcatt
      661 tcgccgggct catcgagcgg gtgaacgacc accgcctgcg ggtcgtgctg taccacatcc
      721 cccaggtagc aggcgtgggc attccgacgg ccgtcgcggc ccgactccga accgagtttc
      781 ccgaacaggt agtcggcctg aaggactcgt cgggtgactg ggcaaccacc gaggccttcc
      841 tcgacatcga cggcttgacc gtctggccgg gcgccgagtt gcccctactg gatgcgttgg
      901 accgggggag cccgggttgc atcactgcca cggccaacgt gaaccccggc ccagtggtcg
      961 aggttgtccg gcagtacgga aaagggggtc gcgaggcggc cgctgacgcc atgggacggg
     1021 ctcgtgccta ccgcctggcc ctccaagatc agccggccat cccgaccatg aagcgcctgt
     1081 tggcgctggc ccacgacgat ccgacgtggg ccaccgtccg accgccgttc gtcgagatgg
     1141 acgaggatga aggtcggacg ctgatggacc gtctcgctgc gatctgaccg actagcgagg
     1201 atcgggcgcc tcgacctgtg atgctgtcgg tatgagacca gacgagaacg aggaacgcat
     1261 agcggtcttc gtcgactacg agaacctcgc catcggtgcc cgtcaggacc tcggcattgc
     1321 ccgtttcgac tttggaccga tcgccagggc catggccgaa cggggtcggg tcgtctatcg
     1381 gcgggcctat gccgactggt ccggcttcga cgatgaccgc cggcacctga cccgccacca
     1441 ggtcgagctg atggagatcc cccaacgcat ggggaccagc cgcaagaact cggccgacat
     1501 caagatggtg gtcgatgccc tcgagctggc attcgagcgc gacttcgtga cgaccatcgt
     1561 gatctgcacc ggagacagcg acttcacgcc tctcgtccag aagctgcgtg agctggaccg
     1621 cagggtcatc gggatcggcg tgaggaactc gacctccaag ttgctgccgc cggcgtgcga
     1681 cgagttcctc tactacgaca gcctcgaggg cgtggaggcg gtcatcgcgg ccagcaaggc
     1741 cccgaagagg aaggcgccca ctggtggccg ttcttcggtc gagtccgacg atgagccgat
     1801 ggccgaggcc ccaccgctcg aggaactggt cgtctcgacg ctggccggca tgcagggctc
     1861 caccgaggac gtacgggcct cgacgctgaa gcgggccatc acccgcatcg acccgacgtt
     1921 caacgaggcc gatcacgggt tccggggctt caccgaactg ctgcgccacc tggccgggcg
     1981 gaagcgggtg gagttgtccg gtgagaagcg cgatcccgag gtcgacctgg taaccggtga
     2041 cgggccagcc caggtcggat tcgacctgct ggtcgacgtc gtggccgcca agtcgaagaa
     2101 gggcggagcg gtgctgtccg gcctcaagac cgagatgaac cgacgggacg agaccttcaa
     2161 cgagcgggcc ctcggctacg gcggcttcct gcagttctgc aaggccgcag cggcgcgcga
     2221 cctggtggtc atggcctggg acgacgaccg gggcgactac ctgctcaccc cggctggttg
     2281 agggtctggt ccggcgaccc cgaggctggg gtcaggccga gcgaaagctg aggttgagcg
     2341 gacgccgcac gtagttgccg gtggcgtacg ccatgtcgtc gacgtcgacc acgtagtccg
     2401 ggaagcgggc caacagttcc tcgagggcca cccatccctg taagcgggcg gcggcagccc
     2461 ccaggcagtg gtgggccccg tagctgaacg tcaggatcct cgccgggttg cgacccacgt
     2521 cgaggagttc ggcgtcgtcg ccgaactcgc gctcgtcccg gttggctgcc ccgtagctga
     2581 gcaacacctt ggatccctcg gggataaacc gtccatggag ctcgacgtcc cgggtggtgg
     2641 tacgggccag gttctggacg gggctggtca ggcgaagcaa ctcctcgaca gcggccggga
     2701 tcatcgatgg atcgtccacg agccgtcgtc gctggtctgg gtgctgatgg agcagcgctg
     2761 tcgatccgcc cagcagcccg gtcgtggtgt cgttgccgcc ggtgaccatg gtgaaggcga
     2821 aaccgaggat ccacaggatt gacaccgcgt cctcgcccat ggcgatcagc tggctgacca
     2881 tgtcgtcgcc tggttcgagc cgtcgacgct cgatgaggtc ggtgaagtag gcaagcaggt
     2941 cgccgatgcc tgaatcgggc tcgtcggtcc ggccctgggc tgcggcggcc acgatc
//
LOCUS       DASCMR010000138         3598 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000682340, whole genome shotgun sequence.
ACCESSION   DASCMR010000138 DASCMR010000000
VERSION     DASCMR010000138.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3598)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3598)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3598
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000682340"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..444)
                     /locus_tag="QGG16_03445"
     CDS             complement(<1..444)
                     /locus_tag="QGG16_03445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24365.1"
                     /translation="MDGADPLRSLSAGEQVALSLQSPPGLPVELLAWGRERLRDLPWR
                     AVRDRWSILVAEVMLQQTQVTRVVERWPRFLGRYPTPTVCAKASVGEVIAEWSGLGYN
                     RRAVYLHRAAATVVDRHGGQVPGNLADLLDLPGIGPYTARAVLAFA"
     gene            522..1013
                     /locus_tag="QGG16_03450"
     CDS             522..1013
                     /locus_tag="QGG16_03450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24366.1"
                     /translation="MANAPDLSIELHPVGGDPRLLSQLLTTFPMAAVVVDPYTHESSW
                     LLDTARRVLTVFRGADVRVAFVVAGADAAGAASFLGPLVDEILTLADPDRSVARSMGL
                     SSLPAFVAIRQDGSVIGVAEGWDPEAWRATAADLADMTSWSRPEIPSLGDPAPYAGTA
                     ALG"
     gene            1049..2005
                     /locus_tag="QGG16_03455"
     CDS             1049..2005
                     /locus_tag="QGG16_03455"
                     /inference="COORDINATES: protein motif:HMM:NF012517.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HJP24367.1"
                     /translation="MRVRVGFGFGGSTGPGGERGGDSIFAAVVDDLERLGFDSLWVSE
                     RATGTTLDPMVAMAFAAGRTERLKFGPAVMVLPGRNPVLCAKALASLDRVSGGRALPA
                     FGLGIADAAEHQAFGVQRGDRAAWFDEALPLMRRLWTEDVVDHDGDRFHLEGVRVQPK
                     PIQDPFEVWLGGQAPSELRRCGRLGDGWLPSFTTPAMVSDGIHLVSTTATEHGRTIDP
                     EHFGALVPFVHGSMPERFAARLRVRQPDLDPREVVAQGVAGIRSRLEAFVSVGASKFV
                     VFPLDEPSERSSSRSTGSASGGVDAWHATIEDVATECLSLQS"
     gene            2014..2937
                     /locus_tag="QGG16_03460"
     CDS             2014..2937
                     /locus_tag="QGG16_03460"
                     /inference="COORDINATES: protein motif:HMM:NF014841.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-isomer specific 2-hydroxyacid dehydrogenase
                     family protein"
                     /protein_id="HJP24368.1"
                     /translation="MPARAIAVAPDTRAGMYEAMCRAVIDGGGTLADISVAEGLVWSD
                     PARPEAFPSLVAEASRLEWIQLPYAGIEPFADHLDERWRWTCGKGVYAPAVAETVLAL
                     MLAGQKHIHGYSRASGWSRPVGRILRGSRVTILGGGGITELLLPLLAPFGCDVTVVRR
                     SCEPFEGADRTVTTSRLHELLPRTDVLVLALALTAETTGIIAAPELAALPDHAWLVNV
                     ARGGHVVTDDLVAALTSDAIGGAALDVTDPEPLPDGHPLWSAPNCLITPHIANTPEMG
                     LALLEPFVAENVRRFCSGEDLLAPVDVALGY"
     gene            2957..3340
                     /locus_tag="QGG16_03465"
     CDS             2957..3340
                     /locus_tag="QGG16_03465"
                     /inference="COORDINATES: protein motif:HMM:NF018942.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0030416 - methylamine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MauE/DoxX family redox-associated membrane
                     protein"
                     /protein_id="HJP24369.1"
                     /translation="MPVFLVTTTSWLLAGVFMAAAATKLRDPLGTRRTLGEFGLPRPR
                     LLSRVLPATEAATALLLVIDPRVGGQCAVALLVAFTTLIAGRLATGHRDPCGCFGTWS
                     RRPLSWRDLAVNAVLVALGVVAALG"
BASE COUNT          529 a         1239 c         1190 g          640 t
ORIGIN      
        1 ggcaaatgcc agcaccgctc gcgccgtgta gggcccgatc ccgggtaggt ccagcagatc
       61 tgccaggttc ccgggcacct gacccccgtg gcggtcgacg accgtggcag ccgcccgatg
      121 gaggtacacg gcccgccggt tgtatcccag ccccgaccac tcggcgatca cttcgccgac
      181 cgacgccttt gcacataccg tcggcgtcgg ataccgcccg aggaaccggg gccaacgctc
      241 gaccaccctc gtgacctgtg tctgttggag catcacctca gccaccagga tcgaccagcg
      301 atcccgaacg gccctccacg gcaggtcgcg gaggcgctcg cgaccccacg ccagcaactc
      361 gacgggaagc cccggagggc tctgtaacga cagcgcaacc tgttcgccgg ccgacagcga
      421 tcgcaggggg tcagcgccat ccaccgaacc gacggtagtc ccggggtgga gacagtggcc
      481 gggccctgag atccgaatgc ggcgcgctag cgtcagcgcc cgtggcgaac gcacccgacc
      541 tctcgatcga actgcatccc gttggcggtg acccccgcct gctctcgcag ttgctgacca
      601 cctttcccat ggctgctgtc gtggtcgacc cctataccca cgagagttcg tggctgctgg
      661 acaccgcccg gcgcgtgctc accgtctttc gcggcgcgga tgtccgcgtg gcctttgtgg
      721 tggccggggc tgatgccgcc ggggccgcta gcttcctcgg ccctctggtc gatgagatcc
      781 tcaccctggc tgaccccgac cggtccgtgg cacgttccat gggcctcagc agccttccgg
      841 cgttcgtggc catccgtcag gacggatcgg tgatcggcgt ggccgaaggt tgggatccgg
      901 aagcatggag agcgacggcg gccgatctgg ccgacatgac cagttggtcc cgtccggaga
      961 tccccagcct cggcgatccg gctccctacg ccggcactgc cgcactcggc tgagccgtct
     1021 ggcccagacg gaacccgggg atcgatcaat gcgggtccgc gtcggattcg gcttcggcgg
     1081 ttcaaccggc ccgggtggtg aacggggcgg cgattcgatc ttcgcggccg tcgtcgatga
     1141 cctggaacgt ctcggcttcg attccctctg ggtgagcgag cgggcgaccg gaaccacgct
     1201 cgacccgatg gtggccatgg ccttcgccgc ggggcgtacc gaacgtctca agttcgggcc
     1261 agctgtcatg gtgctccccg ggcggaaccc ggtgctgtgc gccaaggccc tggccagtct
     1321 ggaccgcgtg tccggaggcc gagcgttgcc ggcgttcggg ttgggaatcg ctgacgcagc
     1381 cgaacatcag gcgttcggcg tccagcgggg tgaccgtgcc gcatggttcg acgaggccct
     1441 gcctctgatg cgccgtctct ggaccgagga cgtggtggac catgacggcg accgattcca
     1501 cctcgaaggc gtgcgggtgc agcccaagcc gattcaggat ccgtttgagg tgtggctggg
     1561 aggtcaggct ccctccgaac tgcgacgttg tggccgactc ggcgatgggt ggctgccatc
     1621 gttcaccaca ccagccatgg tctccgatgg catccacctc gtgtcgacca ccgcgaccga
     1681 acacggacgg accattgatc ccgagcactt cggcgcactg gtcccgtttg tccatgggtc
     1741 gatgcccgag cggttcgccg cccggctccg cgttcgccaa cccgacctgg atccccggga
     1801 ggtagtggcc cagggggtgg ccggcatccg gtcccgtctc gaggccttcg tgtccgtagg
     1861 ggcatcaaag ttcgtggtct tcccgctgga cgagccatct gaacggtcat cgagccgatc
     1921 gacgggcagc gcctccggcg gagtcgacgc atggcatgcc accatcgaag acgtggctac
     1981 cgaatgcctc tccctccaga gttgagaaag cccatgcccg cccgagcgat cgccgttgcg
     2041 cccgacaccc gcgcggggat gtacgaggcc atgtgtcggg ccgtgatcga cggtggcgga
     2101 accctggctg acatcagcgt tgccgagggc ctggtctggt ccgaccccgc tcgcccagag
     2161 gcctttccaa gcctcgttgc tgaggccagc aggctggaat ggatccaact tccctacgcc
     2221 gggatcgaac cgtttgccga ccacctggac gaacgttgga gatggacgtg cggaaagggc
     2281 gtctatgccc cggcggtggc cgagaccgtt ctggctctga tgctggccgg ccagaaacat
     2341 attcacgggt actcccgggc atcgggttgg tcccgtcccg tgggtcgaat cctccgcggt
     2401 agccgagtca ccattctcgg tggcggtggg atcaccgagc tcctgcttcc cctgctggcg
     2461 cccttcgggt gtgacgtcac tgtggtacga cgctcctgcg aaccgttcga gggcgccgac
     2521 cggacggtga ctacatctcg gctccacgaa ctcctccctc gtaccgacgt gctggtcctg
     2581 gcgctggcgc tgaccgccga gacgacaggc atcatcgctg cgccggagct cgccgccctt
     2641 ccggaccacg cctggctcgt gaacgtcgcc aggggcggcc atgtggtcac cgacgacctg
     2701 gtggccgctt tgacctccga cgccatcggt ggtgcggccc tggacgtcac cgatcccgag
     2761 ccgctgcccg acggtcatcc gttgtggtcg gcaccgaact gcctcatcac tccgcacatc
     2821 gccaataccc cggagatggg tcttgctctc ctggagccgt ttgtggccga gaacgtgcgg
     2881 cggttctgct ccggtgaaga cctgttggca ccggtcgacg tggcactcgg gtactgagct
     2941 cgcttcccgg tttcccgtgc ctgtcttcct ggtcaccaca acctcctggc tactagctgg
     3001 ggtgttcatg gccgcggcgg ccaccaagtt gcgggatcct ctgggaaccc gccgcaccct
     3061 cggggagttc ggtcttcccc gccctcggtt gctgtctcgt gtgttaccag cgaccgaagc
     3121 ggccacggcc ctgttgctgg taatcgaccc ccgagtgggt ggccaatgcg cggtggccct
     3181 gctggtcgcc tttaccacgc tgatcgccgg acggctggca accgggcacc gggatccatg
     3241 tggttgcttc gggacatggt cacggcggcc gctctcgtgg cgagacctgg ctgttaacgc
     3301 ggtactggtc gccctcggcg tggtggccgc cctcggctga agccggaacc ggaccgactg
     3361 ctaccgtccg cgccctacct gagttccacg agatccgcca ggagcctgac gaccatggat
     3421 tcacttacgg cgacccgacg actggccggg cccatcggga gtttcggggc aaggttcatg
     3481 ctggatccga ccaccttcac tcgttccacc gagatggggc tgccggccag tctggcgggc
     3541 tacgtacagg ggcgggtcgg ggtcatgggc ggagtcgaca cggagacggc cgtcgaca
//
LOCUS       DASCMR010000139         4440 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000690424, whole genome shotgun sequence.
ACCESSION   DASCMR010000139 DASCMR010000000
VERSION     DASCMR010000139.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4440)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4440)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4440
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000690424"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..353
                     /locus_tag="QGG16_03470"
     CDS             <1..353
                     /locus_tag="QGG16_03470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HJP24370.1"
                     /translation="TMVEALRRCSNQFRTGMLTNNITPISSQPVSGDVLEVVGLFDEL
                     IESSVEGCRKPEPRIYEIACERLGVEPAACVFLDDLGINLKPARAMGMTTIKVVHPDE
                     AIADLESVLGIPLS"
     gene            364..1146
                     /locus_tag="QGG16_03475"
     CDS             364..1146
                     /locus_tag="QGG16_03475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HJP24371.1"
                     /translation="MRIVTWNVNSLKARIERVEAWITAVAPDVLCLQETKMTDEAFPH
                     DRFTALGYQSAHHGEGRWNGVAVISRVGLDDVRPGFADGRDDPDPDARILWATCAGVR
                     VASCYVPNGREVDHDHYRYKLDWLGRLHDDLTANTDPATDPVVVVGDFNVAPDDRDVW
                     KPAAFEGMTHVTKPEREALQRLESLGFTDVFREQFDEAGLHSWWDYRGGAFYKRMGMR
                     IDLVYASPVAASALDFVVVDRNERKGEKPSDHAPVVADFSLI"
     gene            complement(1198..3591)
                     /locus_tag="QGG16_03480"
     CDS             complement(1198..3591)
                     /locus_tag="QGG16_03480"
                     /inference="COORDINATES: protein motif:HMM:NF024991.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase UvrD2"
                     /protein_id="HJP24372.1"
                     /translation="MNTVDGFPGFDPAPDGLQGDAYGDADAEALLGGLNDEQRAAVTT
                     DALPLAIHAGAGSGKTRVLTHRIAWRALTGRDDPRRVLALTFTRKAASELRSRLRLLG
                     MRDQVAAGTFHSVALAQLRTWWRENDRREPELLDRKMGMIRALLPRDHRATAALDVVA
                     EIEWAKARRIRPEAYTTSAEAAGRTPPLPAPTVSRIYGEYEQQKTDRHLVDFDDLLDQ
                     CRHALTTDRRFADAQRWRFRHLYVDEFQDVNPLQFDLLAAWLGGRTDLCAVGDPDQAI
                     YGWNGADADHLNRFDAHFPGATVLELRQNYRSTPQVLRVAARALVGREPMAANKDSGP
                     DPTIAGYADERSEATAIAQNIRDRRGPDGRWRDQAVLVRTNAQTEPVVKALHDAGIPV
                     RTRSGSGLLDRADVKAQMNTLGRVNGPLTDHLGDLRAAMAVPLEFDESFDAGDDVATD
                     ETTVGSGDETGRAAAFAELGRMADEFLALEPTGTGRGFVASVKSQAMAAADESTDAVE
                     VATFHSAKGLEWPSVHLAGLEHGLVPISHAREAAAVAEERRLLYVALSRAEEHLSMTW
                     AEQRTFGTRSAKRRPSPWLADLEAAIAGLDHPVGRSEGARRVAELGARTRRPSLPDHP
                     VVAALRDYRSTAARAASVPPYVVFNDATVADLIASWPTTPNELLAVHGIGPTKAERHG
                     VAILAVLAKHDRPEGLEPPTSPASAAVPSSTPAAQTPGRPVVPSSGLLRDQLCDWRRE
                     TAAERDVPLYRVLTNAAIDALVDLRPIDVDGLLAVPGIGPKTLEAYGPALLAMINAD"
     gene            3653..4027
                     /locus_tag="QGG16_03485"
     CDS             3653..4027
                     /locus_tag="QGG16_03485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallopeptidase family protein"
                     /protein_id="HJP24373.1"
                     /translation="MEPIEPEAFDRLVAEALDGLPDDLAHLMDNVVVLTANRGDPPDL
                     LGLYDGIPLTERDDYGGVWGGGPDGGGLVMPDRIHLYRLALCDLATDVDELRREVTVT
                     VIHEVAHHFGIDDEFLDGTDFA"
     gene            complement(4031..>4440)
                     /locus_tag="QGG16_03490"
     CDS             complement(4031..>4440)
                     /locus_tag="QGG16_03490"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025054.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HJP24374.1"
                     /translation="ELDVGTLHDLLQLRVDVFVVEQDCAYPELDGRDPEPDTRHVWLD
                     GPDGRPAAMARVLVEPDGTHRVGRVTTRADARGSGLAGVLLTHVHDTTPGRIVLDAQT
                     HLVPWYTSLGYESTGDEFLEDGIAHVPMARRGP"
BASE COUNT          698 a         1452 c         1557 g          733 t
ORIGIN      
        1 cgaccatggt ggaggccctc cggcgttgct ccaaccagtt cagaaccggg atgctgacca
       61 acaacatcac cccgatcagc tctcaaccgg tttccggcga cgtcttggag gttgtaggcc
      121 tgttcgacga gctcatcgag tcgagcgtcg aaggctgtcg caaacccgag ccgcggatct
      181 acgagatcgc ctgcgaacgg ctgggagtgg aacccgccgc atgcgtcttc cttgacgacc
      241 tcggtataaa cctcaagcca gcccgggcca tggggatgac cacgatcaag gtggtgcacc
      301 cggacgaggc catcgccgac cttgaatccg tgctcggcat cccgctctcc tagggtcggg
      361 cccatgcgga tcgtcacctg gaacgtcaac tccctgaagg cccggatcga gcgggttgag
      421 gcgtggatca ccgcggtggc ccctgacgtt ctttgtctcc aggagacgaa gatgaccgac
      481 gaggcgtttc cccacgaccg cttcacagcg ctcggctacc agtccgccca ccacggagag
      541 ggtcggtgga acggggtggc cgtcatctcc cgggtgggcc tcgacgacgt tcgtccgggg
      601 ttcgccgacg gccgtgacga cccggatccc gacgcccgga tcctgtgggc cacgtgcgcc
      661 ggggtgaggg tggcctcgtg ctatgtgccc aacggccgcg aggtcgacca cgaccactac
      721 cgctacaagc tggactggct gggtcgcctg cacgacgacc tgacggccaa caccgacccg
      781 gcgaccgacc ccgtggtggt ggtcggggac ttcaacgtgg cccccgacga ccgcgacgtc
      841 tggaagccgg cagccttcga ggggatgacc cacgtgacga agcccgagcg cgaggccctc
      901 cagcgactcg agtcgctcgg cttcaccgac gtcttccggg agcagttcga cgaagcgggc
      961 ctgcattcgt ggtgggacta ccggggcggc gcgttctaca agcgaatggg tatgcggatc
     1021 gacctcgtat acgcctcgcc ggtggccgcc tcggcgctcg acttcgtggt ggtggaccgc
     1081 aacgaacgca agggtgagaa gcccagtgat cacgcaccgg tggtggccga cttctctctc
     1141 atctgacccc ggacgaccgc cgggcccgaa ggggtggtcc ggtgccgagg gagcggttca
     1201 gtcggcgttg atcatggcca gcagggccgg gccgtaggcc tcgagggtct tggggccgat
     1261 accggggacg gccaacaggc cgtcgacgtc gatgggtcgg agatcgacca gagcgtcaat
     1321 ggccgcattg gtcagcaccc ggtagagcgg tacatcacgt tcggcggccg tctcccttcg
     1381 ccagtcgcag agctggtcgc gcagcaaccc tgagctgggg accaccgggc ggccgggggt
     1441 ttgagcggcc ggtgtggagg agggcacggc ggccgaggcc ggtgaagtcg gtggctccag
     1501 cccctcgggg cgatcgtgtt tggccagcac ggcgaggatg gcaacgccgt gccgttcggc
     1561 cttggtcgga ccgatcccgt gcaccgccag gagctcgttg ggggtggtgg gccatgaggc
     1621 gatcaggtca gccaccgtgg cgtcgttgaa cacgacgtag ggcggtaccg atgcggcccg
     1681 ggcggcggtg gaccggtagt cccgcagggc ggccaccacg gggtggtcgg ggagcgaggg
     1741 gcggcgagtc cgggcgccca gttcagcaac tcggcgcgct ccctcggatc gacccaccgg
     1801 atgatccagg cctgcgatgg cggcctcgag gtcggccagc cacggtgatg gacgtcgctt
     1861 ggcggagcgt gtgccaaagg tccgttgctc ggcccaggtc atcgagaggt gttcctcggc
     1921 tcggctgagc gcgacgtaaa ggagtcgacg ctcctcggca acggccgcgg cctcacgagc
     1981 gtggctgatc ggaacgaggc cgtgctccag cccggccagg tggaccgacg gccactccag
     2041 acccttggcc gagtggaagg tggccacctc gacggcgtcg gtcgactcgt cggctgccgc
     2101 catggcctgg gacttgactg aggcgacgaa cccccgaccg gtaccggtcg gttccaaggc
     2161 caggaactcg tcggccatgc gtcccaactc cgcaaaggcc gcagcccgtc cggtctcgtc
     2221 gccactgccg acggtcgttt cgtcggtggc cacgtcgtca cctgcgtcaa aggactcgtc
     2281 gaactccagc ggtacggcca tcgctgcccg gaggtcgccc agatggtctg tgagtggtcc
     2341 gttaacacga ccgagggtgt tcatctgggc cttcacgtcg gcccggtcca gaaggccgct
     2401 cccgctccgg gtgcgaacgg gaatcccggc atcgtgcagg gctttgacca ccggctcggt
     2461 ctgggcattg gtgcggacca gcaccgcctg gtcacgccac cgaccgtcag ggccgcgtcg
     2521 atcgcggatg ttttgggcga tggccgtcgc ctcggaacgc tcgtcggcgt aaccggcaat
     2581 ggtcggatcc ggcccgctgt ccttgttggc ggccatcggt tcccgaccta ccagcgcccg
     2641 ggctgccacc cgcagaacct gcggtgtgct ccggtagttc tggcgcagct caagcaccgt
     2701 ggctcccgga aagtgggcgt cgaatcgatt caggtggtcg gcatcggcac cgttccaacc
     2761 gtagatggcc tgatcggggt ctcccaccgc gcacaggtca gtccggccac ccaaccatgc
     2821 ggccagcaag tcgaactgga gagggttcac atcctggaac tcgtcgacgt agaggtgtcg
     2881 gaagcgccac cgctgggcat cggcaaatcg acgatcagtg gtcagggcgt gacggcactg
     2941 gtccagcagg tcgtcgaagt cgaccagatg acgatcggtc ttttgctgtt cgtactcgcc
     3001 gtagatccgg gacacggtgg gggcaggcag aggtggcgtc cgtccggccg cctcagccga
     3061 agtggtgtag gcctcgggcc ggatgcgacg ggccttggcc cattcgatct cagccaccac
     3121 gtcaagggca gcggtggccc ggtggtcgcg cggaaggagc gcccggatca ttcccatttt
     3181 gcggtcgagc aactcgggct cgcggcggtc gttctcgcgc caccaggttc gaagctgggc
     3241 gagggccacc gagtggaagg ttccggcggc cacctggtcg cgcatcccca gcaaccggag
     3301 cctgctgcgg agttctgagg cggccttcct ggtgaaggtc aaggccagca cccgcctggg
     3361 gtcgtcccgg ccggtaaggg cgcgccaggc gatccggtgg gtcaacaccc gggtcttgcc
     3421 cgagccggca cccgcgtgaa tggccagggg tagggcgtcg gtggtcaccg ctgcccgttg
     3481 ttcgtcgttc aacccgccga gcagtgcctc ggcgtcggcg tcgccgtagg cgtcgccctg
     3541 caggccgtcg ggggctgggt caaagcccgg gaagccgtcc accgtgttca tcgaccgaac
     3601 cctagcgagg gggtcgtgac agccctagag agccgtgtcg taccctcgtg tcgtggagcc
     3661 catcgaaccc gaggccttcg accgtctcgt cgctgaggcc ctcgacggcc taccggatga
     3721 cttggcccac ctcatggaca acgtggtggt cctcaccgct aaccggggtg accctccgga
     3781 tctcctcggc ctgtatgacg gtattcccct cacggaacgt gacgactacg ggggggtctg
     3841 gggtggtggt ccggacgggg gagggctggt gatgcccgat cggatccacc tctatcgcct
     3901 ggccctgtgc gacctagcca ccgacgtcga cgagcttcgc cgcgaagtca cggtcaccgt
     3961 catccacgag gtggcccacc acttcgggat cgatgacgag tttctggacg ggaccgactt
     4021 cgcttgagat ttagggtccg cgccgggcca tgggaacgtg ggcgatgccg tcctccagga
     4081 attcgtcgcc ggtggattcg tagcccaacg aggtgtacca agggaccagg tgtgtctgag
     4141 cgtcgagcac gatccgtccg ggcgtggtgt cgtgcacgtg ggtcagtagc acgccggcca
     4201 agccggagcc ccgggcatcg gctcgggtgg tgacccggcc cacccggtgg gttccgtcgg
     4261 gttcaaccag cacccgggcc atggcggccg gccgaccatc tggtccgtcc agccagacgt
     4321 ggcgggtatc gggctccgga tcccgtccgt ccaactcggg gtaggcgcag tcctgctcga
     4381 ccacgaacac gtcgacccgg agctgcagaa ggtcgtgaag ggtcccgacg tccaactctg
//
LOCUS       DASCMR010000140         1594 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000705902, whole genome shotgun sequence.
ACCESSION   DASCMR010000140 DASCMR010000000
VERSION     DASCMR010000140.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1594)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1594)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1594
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000705902"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..331)
                     /locus_tag="QGG16_03495"
     CDS             complement(<1..331)
                     /locus_tag="QGG16_03495"
                     /inference="COORDINATES: protein motif:HMM:TIGR00731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HJP24375.1"
                     /translation="MSEIVLSAETTRETGTRSSRRLRRAGRIPAAVYGLSQDPVSIDV
                     DWPDLRRVLTTDAGVNAVIHLEFDGAKQMSIVKDIQRHPVRRDVIHVDFLRIDPKQDV
                     TVDVPIVM"
     gene            complement(442..1422)
                     /locus_tag="QGG16_03500"
     CDS             complement(442..1422)
                     /locus_tag="QGG16_03500"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004749 - ribose phosphate diphosphokinase
                     activity [Evidence IEA];
                     GO_process: GO:0044249 - cellular biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HJP24376.1"
                     /translation="MELVTHKKLYLVAGRASRPLAEAVATELGESLGEPNIAEFANGE
                     IHCRFSESIRGCDAFIIQTHCHSEGMSINDTLMEQLIMVDAARRASAKRITVVCPHYG
                     YARQDRKASGREPITAKLVANLFKEAGASRLVGIDLHSGQIQGFFDGPVDHLTAMPVL
                     VDRLRLLEGDLAIVSPDAGRVKVAERYANQLDADLAIVHKRRSHTAFNTVEAKEVVGE
                     VEGKVCVIVDDMIDTAGTVCAAAEQLAERGASRVIAATTHGVFSGPALERLSASPIEK
                     VIVTDTVPLPDGADLDLVEVLSVAPIIARAIDAVFEDASVSEIFGGDNLS"
BASE COUNT          277 a          488 c          541 g          288 t
ORIGIN      
        1 ccatgacgat ggggacgtcg acggtcacgt cctgcttggg gtcgatacgc agaaagtcga
       61 cgtggatcac gtcacggcgt accgggtgac gctggatgtc cttgacgatc gacatctgct
      121 tggcgccgtc aaactcaagg tggatcaccg cgttcacgcc ggcatcggtc gtcaacacac
      181 gacgcaagtc cggccagtcg acgtcgatgc tgaccgggtc ctggctaagg ccatagacgg
      241 cagcggggat acgacccgcg cgacggaggc ggcggctgga ccgggttccg gtttcccggg
      301 tggtctctgc ggagaggacg atctcgctca tggaagtgct ttctggaggt gcgttcaacc
      361 ggcctgcgcg ggtcggcagg ttcggacagg tggtcttgtg gggaccggca gaaaagccta
      421 ccggcgcacg gccccggggc gtcaggagag gttgtcgccg ccgaagatct cgctgaccga
      481 cgcgtcctcg aagacggcgt cgatggctcg ggcgatgatt ggggccacgg acagaacctc
      541 gaccaggtcg aggtcggcac cgtcgggcag cggcaccgtg tcggtgacga tgaccttctc
      601 gatgggcgac gcagacagtc gctccagtgc cggtccggag aacacgccat gggtagtcgc
      661 cgcgatgacc cgcgaggcgc ctcgttcggc taactgctcg gccgcggcac agacggtgcc
      721 cgccgtgtcg atcatgtcgt cgacgatgac gcagaccttg ccctccactt caccaacgac
      781 ctccttggcc tccacggtgt tgaacgccgt atggctgcgg cgcttgtgaa caatggccag
      841 atcggcgtcc aactgatttg cataacgctc ggccaccttt actcgaccgg catcaggaga
      901 cacgatggct aggtctccct cgagtaaccg cagacggtcg acgaggaccg gcatggcggt
      961 gaggtggtcg actggcccgt caaagaagcc ctgaatctga cccgagtgca ggtcgatccc
     1021 cactaggcgg ctggctccgg cctccttgaa caggttcgcc accagcttgg ctgtgatggg
     1081 ctcgcggccc gatgccttcc ggtcctgacg ggcgtagccg tagtgcgggc agaccacggt
     1141 gatccgcttg gccgaggccc ggcgcgccgc gtcgaccatg atcaactgct ccatcagggt
     1201 gtcgttgatc gacatgccct cagaatggca gtgggtctga atgatgaagg cgtcgcaacc
     1261 tcggatcgac tcggagaacc tgcagtggat ctccccgttc gcgaactcgg caatgttggg
     1321 ctccccgagg gactcgccga gttcggtggc gacggcctcg gccagcgggc ggctagcccg
     1381 accggcgacg aggtacaact tcttgtgcgt gaccagttcc atgggctgcg gcgagatcct
     1441 cgtcgggggc ggtttcgttt tcgatcatac gtcggcgact ggtggcacgg atcagccgat
     1501 gtagacgagt ttcgaaggga ccatgccgaa aggttgccgg cctcgggtac ctcagcaggc
     1561 tccgatccag tggatcaccc gaggttgctc agcg
//
LOCUS       DASCMR010000141         6292 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000710891, whole genome shotgun sequence.
ACCESSION   DASCMR010000141 DASCMR010000000
VERSION     DASCMR010000141.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 6292)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6292)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6292
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000710891"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..444
                     /locus_tag="QGG16_03505"
     CDS             <1..444
                     /locus_tag="QGG16_03505"
                     /inference="COORDINATES: protein motif:HMM:NF013426.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase subunit E"
                     /protein_id="HJP24377.1"
                     /translation="FKFHPVGRYVVNVCTNVSCQLLGGEELLEHAESTLGVRAGGTTD
                     DGLFTVEDVECVAACTEAPCFTVNYRYFHRADTETFDEVVADLRAGRSPLVRGAAGDG
                     GDIPDHGTLGRVRQHVPDDRRAGVVPPEDVTGSPAWMPAVEEEAS"
     gene            441..1856
                     /gene="nuoF"
                     /locus_tag="QGG16_03510"
     CDS             441..1856
                     /gene="nuoF"
                     /locus_tag="QGG16_03510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HJP24378.1"
                     /translation="MTGAYVPHAAGYVDNDGPKVVTSRFPHEDSFTLERSLATGGYEG
                     LRAALTMTPDVVHAQVREATLLGRGGAGFPAGVKWGFCPEGVWPRYLVVNGDESEPGT
                     YKDRLLMERDPHQLIEGCLIACYALGLSQCFLYVRGEMALAQERIATALNEAYAAGYV
                     GRNVLGTDLSVDITLHWGAGAYIVGEETALIESLEGNRGMPRLKPPYFPAAIGLYGQP
                     TIVNNVETLANVPWIMSHGAVAYRKMGSETSPGTRLFTVSGHVNRPGVYEVEQGVTTF
                     RDLFYGEAFCQGIRNGHELKMFIPGGGSAPWFFAEHLDLPLEAKEVGAAGSMLGSGAI
                     IVMDETTDAVKACHRMVRFFARESCGKCSPCREGTNWEEKILARILDGHGRPSDIDLL
                     LDVGDNISPGPYPVAAHADEGLEAVPFPPRQTTICPLGPSSVAPITSTIRRFRHEFEA
                     RITRSDGIPVSAAAPGGEVGA"
     gene            1853..4351
                     /gene="nuoG"
                     /locus_tag="QGG16_03515"
     CDS             1853..4351
                     /gene="nuoG"
                     /locus_tag="QGG16_03515"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_process: GO:0006120 - mitochondrial electron transport,
                     NADH to ubiquinone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HJP24379.1"
                     /translation="MSGETPVVEIQVDGETVAAHPGELLIDACERTGTYIPRFCHHSR
                     MKPVGMCRMCLVEVDTGRGPALQPSCMLECTPGMSVETESDRTRKAQDGVLEFLLVNH
                     PLDCPVCDKGGECPLQDQTMAFGPGESRFVEEKRHFEKPIPVNSNVYLDRERCILCDR
                     CTRFAGEVAGDQLIHFMDRGGQTQINTFPEQPFSSYFSGNTVQVCPVGALTATPYRFK
                     ARPWDLEEVESTSTLDSVGSRITVQSSSDRVLRFQGVDADAVNWGWLSDKERFVFEAY
                     DHEDRLASPMLRGDALGNRTAEGDSLVAAPWGEALGVAASALSAAPADRIAVLGGARM
                     TNESQYAWVKLAKGVLGTDHVDAQLADGLPAEVVLGLPRATIDRACTPGGTIVLLGPD
                     PKEELGALFLRLRHAVVHDGATLIELTPRRTGLSPHADHSLRVTPGDAAGVVAAMFGS
                     RSPVGVGGIPVDQLAAAGATLAAAVADGSPVTVLLGRPSLAESAGPVVDGALALHDHL
                     PEATFLSLLRRGNVHGAMDMGLAPGLLPGRASLADAGRVADAWPTVPTAAGHDALGIL
                     TAAAAGDIDVLVLLGADLLADVPDRQLVEQALAGARTVVAIDLFGTETVARADVVLPA
                     VASTELDGTFTNLEGRVSVVARKVTSPGTSRPDWAIAVDLAERLGGDLGFESVDDVLA
                     ELVTVSPLHSALTPEALAEATREGILIEGSLGLDRPEPTGVPGRDGYGLRLVVDRCMY
                     DAGVLVAHSPSLAGLAPGTRAGIEPTDLARNGIDEGEVVDLISAQGTIQVVVAADAGV
                     ARGTVHLRANQPDMDVNALIDALAPVTEVRVGRR"
     gene            4348..5577
                     /gene="nuoH"
                     /locus_tag="QGG16_03520"
     CDS             4348..5577
                     /gene="nuoH"
                     /locus_tag="QGG16_03520"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HJP24380.1"
                     /translation="MSALDTAVLALDPLLSGDLDLGIVGIVVLKVVVAFTLLLVSVML
                     MIWFERKLVADMHNRIGPAVAGPFGILQTLADGIKLFFKEDLIPDRADRVVFKLAPYL
                     SLVPAFLVFAIVPIGGDFSSGDGTVTWFGERTYLQVADPPVGVLFFLALSSIAVYGVM
                     LAGWSSGSKYPLLGSVRASAQMISYEAALGLAIAAVFLTSGSLSTHDIVASQVNGSWN
                     VLATGVVPFIVFLMAGTAELNRPPFDLVEAEQELVGGFHTEYSSLRFALFFLAEFMNV
                     ITMSAIAVTLFLGGPAGPILTDTLGWVWPVFWFSLKVFAFLFCFVWLRATLPRLRYDQ
                     LMDLGWKVLIPVALGWFLLIGAMNVAGDRGWPLVPVVMVGMAVMAGGAALLIGAVSKA
                     RAERLADLDGEREGESV"
     gene            5577..6227
                     /gene="nuoI"
                     /locus_tag="QGG16_03525"
     CDS             5577..6227
                     /gene="nuoI"
                     /locus_tag="QGG16_03525"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HJP24381.1"
                     /translation="MGYFRGFAVTFGKMFEKRVTTSYPKDKRPKPARLHGRHVLNRYE
                     DGMEKCIGCELCAGVCPAKCIYVRGADNPPDEPVSPGERYGFIYEINYLRCIHCDLCV
                     EACPTEAITESKLFEFSFTNRADAIYTKDELVVDATTGRPQHLPWEDWRPGDDAMTSG
                     WMRATSPSGDALYSGQVSWSGELGHGVRAPEVGQSDGDAGAESDEPGSDDEGSDTH"
BASE COUNT          939 a         2116 c         2139 g         1098 t
ORIGIN      
        1 ttcaagttcc atccggtggg ccggtatgtg gtcaacgtat gcaccaacgt gtcctgccaa
       61 ctactgggtg gcgaggaact cctggagcac gccgagtcga ccctcggggt ccgggccggt
      121 ggcaccaccg acgacggcct gttcaccgtc gaggacgtgg agtgcgtggc agcctgcacc
      181 gaggcgccct gcttcaccgt gaactaccgc tacttccacc gggccgacac cgaaaccttc
      241 gatgaggtgg tggccgacct ccgggccgga cgtagcccac tggtccgcgg cgcagcgggc
      301 gacggcggtg acatccccga ccacggaacc ctcggtcggg tacgacagca cgtgccggat
      361 gatcgtcggg ccggcgtggt accccccgag gacgtcaccg ggtcacccgc atggatgcct
      421 gcggtagaag aggaggcatc gtgaccggcg cctacgtccc ccatgccgct ggctacgtcg
      481 acaacgacgg gccgaaggtc gtgacctccc gcttccctca cgaggattcc ttcaccctgg
      541 aacgctccct ggccaccggg ggctacgagg gcctccgggc cgcgctgacc atgacccccg
      601 acgtcgtgca cgcccaggtc cgcgaggcca ccctgctggg ccgtggtggt gccggattcc
      661 cggccggcgt caagtggggc ttctgccccg agggcgtgtg gccccggtac ctggtcgtga
      721 acggcgacga gagcgagccc ggcacctaca aggaccgcct gctgatggag cgcgatccgc
      781 atcaactcat cgagggctgc ctgatcgcct gttacgccct cgggttgtcg cagtgcttcc
      841 tgtacgtccg gggcgagatg gccctggccc aggagcgaat cgccacggca ctcaacgagg
      901 cctatgccgc gggctacgtg ggccgaaacg tcctgggcac cgacctgtcg gtagacatca
      961 ccctccactg gggtgccggc gcctacatcg tgggcgagga aacggcgctc atcgagagcc
     1021 tcgagggcaa ccggggcatg ccccgcctca agccgccgta ctttccggcg gccatcgggc
     1081 tctacggcca gccgaccatc gtcaacaacg tggagacgct agccaacgtg ccgtggatca
     1141 tgtcccacgg cgctgtcgcc taccggaaga tggggtcgga gacctcgccc ggtacccgcc
     1201 tgttcaccgt ttcgggacac gtgaaccggc ccggtgtcta cgaggtcgag cagggcgtca
     1261 ccacgttccg cgacctgttc tacggcgagg cgttctgcca gggaatccgg aacggccacg
     1321 agttgaagat gttcatcccg ggcggtggat ccgcaccctg gttctttgcc gagcacctcg
     1381 acctgccgct ggaggccaag gaggtgggcg ccgccggatc aatgctggga tcgggcgcca
     1441 tcatcgtcat ggacgagacc accgacgccg tgaaggcctg ccatcggatg gtgcggttct
     1501 tcgcccgcga gtcatgtggc aagtgctcgc cctgtcggga ggggaccaac tgggaggaga
     1561 agatcctggc tcgcatcctc gacgggcatg gccgaccgtc cgacatcgat ctgctgctcg
     1621 acgtgggcga caacatcagc cccgggccgt atccggtggc cgcccatgcc gacgaggggc
     1681 ttgaagccgt gccgttcccg ccccgccaga ccaccatctg tccgttgggt ccgtcgtcgg
     1741 tggcgcccat cacctcgacc atccggcgat tccgccacga gtttgaggcc cgcatcaccc
     1801 gaagcgacgg catcccagtg tcggccgccg cccccggtgg ggaggttggc gcatgagtgg
     1861 ggaaacaccc gtcgtcgaga tacaggtcga tggtgagacg gtggccgccc acccgggtga
     1921 attgctgatc gacgcctgcg agcgcaccgg cacgtacatt ccccggttct gccaccacag
     1981 ccggatgaag ccggtcggga tgtgtcgcat gtgcctggtc gaggtcgaca ccgggcgggg
     2041 ccctgccctg cagccgtcgt gcatgctcga gtgcacgccc ggcatgtccg tcgagaccga
     2101 gtcggaccgc acccgaaagg cccaggacgg ggtgctggag ttcctgctcg tcaaccaccc
     2161 actggactgc cccgtctgcg ataagggcgg cgagtgcccc ctgcaggacc agacaatggc
     2221 tttcggacca ggcgagagcc gattcgtcga ggagaagcgg cacttcgaga agccgatccc
     2281 cgtcaactcc aacgtctacc tggaccggga acgctgcatc ctgtgcgacc gctgcaccag
     2341 gttcgccggc gaggtggccg gcgatcaact catccacttc atggaccggg gcggccagac
     2401 ccagatcaac accttccccg aacagccctt ctcctcgtac ttcagcggta acaccgtgca
     2461 ggtctgcccg gtgggcgcgt tgaccgctac tccgtaccgt ttcaaggccc gcccgtggga
     2521 tctcgaggag gtcgagtcga ccagcacgct ggacagcgtg ggcagtcgca tcaccgtgca
     2581 gtcctcgagc gaccgggtgc tccggttcca gggtgtcgac gccgacgccg tcaactgggg
     2641 ctggctctcg gacaaggaac ggttcgtctt cgaggcctac gaccacgagg accgcctggc
     2701 ctcaccgatg ctgcggggcg acgccctggg caaccggacg gccgagggcg actcgctggt
     2761 cgctgcgccg tggggcgagg cgctcggcgt cgctgcgtcg gccttgtcgg ccgcaccggc
     2821 tgatcggatc gccgtgttgg gcggcgcccg gatgaccaac gagtcgcagt acgcgtgggt
     2881 caagctggcc aagggcgtgc tgggcaccga ccacgtggac gcccagttgg ccgatggtct
     2941 gcccgcggag gtcgtcctcg gcttgccgcg ggccaccatc gaccgggcct gcacgcccgg
     3001 cggaacgatc gtgctcctgg gtcccgaccc caaggaggaa ctcggggcgc tgtttctgcg
     3061 actccgacac gccgtggtcc acgacggggc caccctgatt gaactcacgc cgcgacgtac
     3121 cgggctgagc cctcacgccg accattcgct gcgagttacc ccaggtgatg cggctggcgt
     3181 ggtggccgcc atgttcggct ccagatcacc ggtcggtgtc ggcggcatcc cggtcgacca
     3241 gttggccgct gccggagcca ccctggccgc cgcggtggct gacggttcgc cggtcacggt
     3301 gctgctgggc cgaccctcgc tggccgagtc agccggcccg gtagtggacg gtgcactggc
     3361 cctccacgac catctgcctg aggccacatt cctctcgctt ctccgtcgcg gcaacgtcca
     3421 cggcgccatg gacatgggtc tggctcccgg gctccttcca ggtcgcgcat cgctggccga
     3481 tgccggacgg gtcgccgatg cgtggccgac cgtaccgacg gccgccggcc atgacgcgct
     3541 ggggattctc actgcggcgg ccgctggaga cattgacgtc ctcgtcttgc tgggggccga
     3601 tctgctggcc gatgtgcccg accgccaact cgtcgagcag gccctggccg gggcgagaac
     3661 cgtggtggcc atcgacctgt tcggcaccga gaccgtggcc cgggccgacg tggtcctccc
     3721 cgccgtggcc tccaccgaac tcgacggaac cttcaccaac ctggagggcc gggtaagcgt
     3781 ggtggcccgc aaggtgacct cacctggaac gtcccgacct gactgggcga tcgccgtgga
     3841 tctcgccgag cgtctgggtg gtgacctggg cttcgagtca gtggacgacg tgctggccga
     3901 actggtcacc gtgtcgccgc ttcactccgc gctcacaccc gaggccctcg ccgaggcgac
     3961 ccgcgagggg atcctgatcg agggttcgct gggtctggac cggcccgaac cgaccggcgt
     4021 tccgggacgc gacggctacg gcctccgcct ggtggtcgac cggtgcatgt acgacgccgg
     4081 ggtcctggtg gcccacagcc cgtcattggc cggtctggcc ccggggacgc gtgccggcat
     4141 tgagccgaca gacctggccc gcaacgggat tgacgagggt gaggtcgtgg acctcatcag
     4201 cgcccaaggc accatccagg tggtggtggc cgccgatgcc ggtgtggccc gggggaccgt
     4261 gcacctgagg gccaaccagc ccgacatgga cgtcaacgcc ctgatcgatg ccttggcgcc
     4321 ggtcaccgaa gtccgggtgg gtcgccggtg agcgccctgg acaccgccgt gctggcgctg
     4381 gatccgctgc tgagtggcga tctggacctg ggcatcgtgg gcatcgtggt cctgaaggtc
     4441 gttgtggcct tcaccctgct gctcgtctcg gtcatgctca tgatctggtt cgagcgcaag
     4501 ctggtggccg acatgcacaa ccggatcggc ccggccgtgg ccggcccgtt cggcatcctc
     4561 cagacactgg ccgacgggat caagctgttc ttcaaggagg acctcatccc ggaccgggcc
     4621 gaccgggtgg tcttcaagtt ggccccctat ctgtcgttgg tgccggcctt cctagtgttc
     4681 gccattgtcc ccattggggg cgacttctcg tcgggcgacg gcaccgtcac gtggttcggt
     4741 gagcgcacct acctgcaggt ggccgacccg ccggtgggcg tcctattctt ccttgccctc
     4801 tcttcgatcg ccgtctacgg cgtgatgctg gccggctggt cgtcgggttc gaagtacccg
     4861 ctgctcggtt cggtgcgggc gtcggcccag atgatcagtt atgaggcggc cctcggcctg
     4921 gccatcgcag cggtcttcct gacctccggt tcgctgtcca cgcacgacat cgtggccagt
     4981 caggtcaacg gcagctggaa cgttctggcc accggcgttg tcccgttcat cgtgttcctg
     5041 atggccggga ccgctgagtt gaaccgcccg ccattcgacc tggtggaggc cgaacaggag
     5101 ctggtcggcg ggttccacac cgaatacagc tcgctgcggt tcgctctctt ctttctggcc
     5161 gagttcatga acgtaatcac catgtcggct atcgccgtca ccttgtttct gggtggccca
     5221 gccggaccga tcctgaccga caccttgggc tgggtgtggc cagtcttctg gttcagcctc
     5281 aaggtgttcg ccttcctgtt ctgcttcgtg tggctccggg ccacgctgcc ccggctgcgc
     5341 tacgaccagc tcatggacct ggggtggaag gtgctgatcc cggtggctct cggatggttc
     5401 ctgctgatcg gggccatgaa cgtggccggt gaccggggat ggccgctggt gccggtggtg
     5461 atggtcggca tggccgtgat ggccggcggt gctgcgctcc tcattggtgc ggtgtccaag
     5521 gcccgggccg agcgtctggc agacctggat ggcgagcggg aaggcgagtc ggtctgatgg
     5581 gttacttccg cggcttcgcc gtcaccttcg gcaagatgtt cgagaagcgg gtcaccacct
     5641 cgtacccgaa ggacaagcgt cccaagccgg cccgcttgca cggccgccac gtgctgaacc
     5701 ggtacgagga cggcatggag aagtgcatcg gttgtgagct gtgcgccggg gtctgcccag
     5761 cgaagtgcat ctacgtgcgc ggcgccgaca acccgcccga cgaaccggtg tcccccggcg
     5821 agcggtacgg cttcatctac gagatcaact acctgcggtg cattcactgc gacctgtgcg
     5881 tggaggcctg cccgaccgag gccatcaccg agtcgaagtt gttcgagttt tcgttcacca
     5941 accgggccga cgccatctac acgaaggacg agttggtggt cgatgccacc acgggtcgtc
     6001 ctcagcacct cccgtgggaa gactggcgac cgggtgacga cgccatgact tcgggttgga
     6061 tgcgtgccac gtcgcccagt ggggacgcct tgtacagcgg acaggtgtcg tggtcgggcg
     6121 agctgggtca tggcgtgagg gccccggagg tcgggcagtc agacggagat gccggcgctg
     6181 aatccgacga acctggatcc gatgacgaag ggtcggatac ccactgatgg aagccttcgt
     6241 cttcttcgcc agtgcggcga tcgtgttgac cggtgccgtg ggcgtgctca cg
//
LOCUS       DASCMR010000142         7665 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000712482, whole genome shotgun sequence.
ACCESSION   DASCMR010000142 DASCMR010000000
VERSION     DASCMR010000142.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 7665)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7665)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7665
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000712482"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            253..1266
                     /gene="glnII"
                     /locus_tag="QGG16_03530"
     CDS             253..1266
                     /gene="glnII"
                     /locus_tag="QGG16_03530"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase GlnII"
                     /protein_id="HJP24382.1"
                     /translation="MAIRAEYIWIDGTEPLPYVRSKTKIIEDPQDLPIWGFDGSSTNQ
                     APGDNSDCVLRPVFSCPDPIRGGEDILVLCDVCLPDGNMTPHPTNTRAACVEAFEKYA
                     DQEPIFGIEQEYTFFQEGRPLGWPVEGYPAPQGPYYCGVGAIEVAGRDIVEAHTKACI
                     DAGLAISGTNAEVMLGQWEFQVGPIDTVAVADQLWMARYLLYRVAEDFQVDASVAAKP
                     IKGDWNGAGAHTNFSTNAMREGYDAIITACESLGAEGKPAEHIAGYGLGSEERLTGAH
                     ETQRFDQFSYGVSDRGASVRIPWQVNLDQKGYIEDRRPNANMDPYVVTRLITNTCCEA
                     LAG"
     gene            1493..2119
                     /locus_tag="QGG16_03535"
     CDS             1493..2119
                     /locus_tag="QGG16_03535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24383.1"
                     /translation="MNKKMTIRVVATAVSLMAGSVLVATLSPIGTAGAHSSAETPADT
                     SADAWAGARMDRAARMTERREQFADYRDADRPDKGERAGEKFGYGERFGGQGQMKQKW
                     DRRTHFSIQVADFLEMDRRGLGMALRDGATLAELAGDRVDELVAELVATASERIEQAV
                     ADEKLDRDRADEILAGAEERAKSRVNGEHPTRRGGPSGLHWSMRRLAS"
     gene            2189..3916
                     /locus_tag="QGG16_03540"
     CDS             2189..3916
                     /locus_tag="QGG16_03540"
                     /EC_number="6.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003952 - NAD+ synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HJP24384.1"
                     /translation="MTRVRLAMVQIDTVVGDLDGNVDRVLATLDEVADCDLALYPEMT
                     VTGYPLEDLVHKPGFVVHSREAVERVAAASGSCTLVVGFADVGPDGPDGPAYNAVAVC
                     HGGRIVGTYHKECLPTYDVFDEARDFAPGTAPLVLHRIGGVRVGLAICEDLWVAGGPV
                     ERLVAGGADLIATVNGSPYHLGKQAARESVVAASAASSGRPVVYLNLVGGQDQLVFDG
                     GSMVADSSGRIVARAPRFDEAVVIVDVDASRAGADPVNDHASPQGTALPVIEVSEEVE
                     RPDHLVVPALAPLDETAELYGALVAATRGYVIKSGFTDVCLGLSGGVDSALVATVAAD
                     ALGPDHVHAVLMPSRYSSDHSVDDAQALVASQGIDAHVLPIEEAHLALTGVLARAIEG
                     GPTGLVDENLQARIRGVLLMGLSNAHGWMVLTTGNKSESAVGYSTLYGDTAGAYAVIR
                     DIYKTRVYDLCRWRNAGKPGMDGQPVIPEHILTKPPSAELRPDQTDDQSLPLYDVLDP
                     LLEAYVEGNRTRAELVADGHDPDLVDRVVRLVDGAEFKRRQTPLGPKVTTRGFGRDRR
                     MPIVNHFRG"
     gene            3913..4377
                     /locus_tag="QGG16_03545"
     CDS             3913..4377
                     /locus_tag="QGG16_03545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24385.1"
                     /translation="MTAVTDAPLGEGPTALTTEGGAREFMQLADLCEALAGQLGDWST
                     DGADFASAAAMASLSARLTEHAGWWRDQVPESVLLAEVRDAASDPVRLAAVLAMLDVA
                     PSARTAAVAPVLDGVVAHLVGLADRLSPVGDAPARRVLRLVLADLADRPRYP"
     gene            4611..5576
                     /locus_tag="QGG16_03550"
     CDS             4611..5576
                     /locus_tag="QGG16_03550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HJP24386.1"
                     /translation="MFPRLEETRVAKERVERDEEDLVRLYLTDIGQYPLLTKEGEVRL
                     AQQIEAGTEGRAEMSAKGDSLTPVRKRELKRNIKRGEEAERTFVQSNLRLVVSIAKKY
                     QASGLPLLDLIQEGNLGLMHAVEKFDWRKGFKFSTYATWWIRQAITRGIANTGRTIRL
                     PVHAGDTLARLQKARSRLELKFGRQATLAELSAEVEMPEEKVTEALRFAAEPLSLSEP
                     LREDGDAELGDVVEDRAAESPFEVAATSLLPEEISRLLAPLDTREREILKLRFGLDRG
                     EPRTLEEVGEHFNLTRERIRQIEARAMSKLRHPSSDTGARDLLAV"
     gene            complement(5652..5747)
                     /locus_tag="QGG16_03555"
     tRNA            complement(5652..5747)
                     /locus_tag="QGG16_03555"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(5710..5712),aa:Sec,seq:tca)
     gene            complement(5973..6758)
                     /locus_tag="QGG16_03560"
     CDS             complement(5973..6758)
                     /locus_tag="QGG16_03560"
                     /inference="COORDINATES: protein motif:HMM:TIGR01490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IB family hydrolase"
                     /protein_id="HJP24387.1"
                     /translation="MEAAFFDLDKTVIARASMAAYGPALHRAGYLSAPMALRAAWGQV
                     LFRFFGADEGSMARARQTALRLAAGWDQETLKRFARDHLAEVIEPIVYDEALDLFAHH
                     RAEGRLLILVSASPVEIVAPLAEHLGVDEFIATTPEIDADGKYTGEVEFYAQGPDKAY
                     AIKRLAADRGIDLAGSWGYSDSVTDLPMLDVVGHPVAVNPDRDLRRTAEIQGWLIREF
                     ENPVPLGDRVPIDRNWIAATTLSALMVAAIVALARRIGRRRAD"
     gene            6857..7030
                     /locus_tag="QGG16_03565"
     CDS             6857..7030
                     /locus_tag="QGG16_03565"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24388.1"
                     /translation="MVIEIYWPVKSGRGTAMLERGPGSGGQSPSHRVEDAVIDSASLN
                     PQNIDVKRVVDGD"
     gene            7278..7658
                     /locus_tag="QGG16_03570"
     CDS             7278..7658
                     /locus_tag="QGG16_03570"
                     /inference="COORDINATES: protein motif:HMM:NF013868.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043856 - anti-sigma factor antagonist
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HJP24389.1"
                     /translation="MQLDVLSRDLRPSDTSVGPAAVVLTVLGDLDMAGAPSLRQAVVT
                     VVDGGARLVVLDLTAVDFVDSAGLGVVVGALRRLRAHDGDLVVVCPEPRIRRVFEMCD
                     LDRVFALHRDVDAAAAAMDGRALA"
BASE COUNT         1261 a         2400 c         2630 g         1374 t
ORIGIN      
        1 gtcgcgttgg cggtgttcgc gatccggtcc gctgtctatg tcttcgccag ctttctctgt
       61 gttcatgggt ccagcatggg cccgtcggag ctgggagtac cagttccaga gcgcgtcgtt
      121 cacatggcgt tcacagttag aaaacagtca tgaaaccgct ccccccgtag gtttcacgtg
      181 tccggcaacg cggccggccg accaggtctg tttaatcgac ccaccgaccg acccaaggat
      241 caggagatca ccatggccat cagggctgag tacatctgga tcgacggcac cgagccgctt
      301 ccctacgttc gttcgaaaac caaaatcatc gaggacccac aggacctccc catctggggt
      361 ttcgacggtt cgagcaccaa tcaggccccc ggcgacaact cagactgtgt gctacgaccc
      421 gtgttctcgt gtccggaccc gatccgtggc ggtgaagaca tcctcgtgct gtgcgacgtc
      481 tgcctccccg acgggaacat gaccccgcac cccaccaaca cgcgggctgc ctgcgtggag
      541 gcattcgaga agtacgccga ccaggaaccg atcttcggca tcgaacagga gtacaccttc
      601 ttccaggagg gtcgcccctt gggttggccg gttgagggct atccagcgcc gcagggcccc
      661 tactactgtg gtgtgggcgc catcgaggtc gccggccgtg acatcgtcga agcgcacacc
      721 aaggcctgca tcgacgccgg cctggccatc tcgggtacta acgccgaggt catgctcggc
      781 cagtgggagt tccaagtcgg tccgattgac accgtggccg tggccgacca actctggatg
      841 gcccgttacc tgctgtaccg ggtggccgag gacttccaag tggacgcctc ggtggccgct
      901 aagcccatca agggtgattg gaacggtgcc ggtgcgcaca ccaacttttc taccaacgca
      961 atgcgtgagg gctacgacgc catcatcacg gcgtgcgagt cgctgggtgc cgagggcaag
     1021 ccggcggagc acattgccgg ttatggcctg ggttccgagg agcgcctcac cggcgcgcac
     1081 gagacacagc gcttcgacca gttcagttac ggcgtgtcgg accgcggcgc atcggtccgc
     1141 atcccgtggc aggtgaatct agatcaaaag ggctacatcg aggatcgtcg ccctaacgcc
     1201 aacatggatc cgtacgtggt cacccgtctg atcaccaaca cctgttgtga ggccctcgcc
     1261 ggctgatcgg ttcaaacatt cgaccggttt tgccggtcgc tgttcaatgc ccccgggttc
     1321 cacgctcggg gcatcagcct tttgaccgat gttttcggcg ggttttcttt atccggttct
     1381 ctcttggcct tcatcgtctc ctcatctggc ccctgcatcg ttgtctccag gccgccgacc
     1441 gacggtgcca cggagcccgg tacatcgaga cctgggagaa ctggagcagg cgatgaataa
     1501 gaagatgacg atcagggtgg tcgctaccgc ggtgtcgctg atggcgggat cggttctggt
     1561 ggccacgctg tcgccgatcg gcacggctgg tgctcattcg tcggcggaaa ccccggcgga
     1621 tacttcggct gatgcctggg ccggcgcacg gatggaccgg gcggcacgga tgactgagag
     1681 gcgcgagcag ttcgccgatt acagagatgc tgatcgcccg gataagggtg agagggccgg
     1741 agaaaagttc ggctacggcg aacgcttcgg aggccagggt cagatgaagc agaagtggga
     1801 tcgacggacc cacttctcca ttcaggtggc cgacttcctg gagatggatc ggagaggcct
     1861 cggtatggcc ttgcgtgacg gcgcgacttt ggccgagctg gccggcgatc gggtcgacga
     1921 gttggtggct gagttggtgg ctacggcgtc cgagcgaatc gaacaggctg tcgccgacga
     1981 gaagctggac cgtgaccggg ccgacgagat cctcgccggc gccgaggaga gggccaagtc
     2041 ccgagtcaac ggcgagcacc ccacccgtcg tggtggtccg tccggtctcc actggtcgat
     2101 gcgccgtcta gcttcctgac gggagtccgc cccggctttc gtcccctcca cggctcgggc
     2161 ggtggaagcc cgtcggtacg ctgggaccat gacccgggtc cggctggcga tggtgcagat
     2221 cgacacggtc gtcggcgacc tggacggcaa cgtcgaccgg gtgctggcca ccctcgatga
     2281 ggtggccgac tgtgacctgg cgctctatcc ggagatgacg gtcaccgggt atcccctcga
     2341 ggacctcgtc cacaagcccg gcttcgtggt ccacagtcgt gaggccgtcg aacgggtggc
     2401 cgcggcgagc ggttcgtgca ccctggtggt tggcttcgca gatgtcgggc ccgatgggcc
     2461 ggacggcccg gcctacaacg cggtggccgt ctgccacggt ggccggatcg tcgggacgta
     2521 ccacaaggag tgcctcccca cctacgacgt gttcgacgag gcacgggact tcgctccggg
     2581 caccgctccg ctggtgctcc accgcatcgg cggggtgcgg gtgggcctag ccatctgtga
     2641 ggacctgtgg gtggccggtg gcccggtcga acgcctggtg gccggtggtg ccgacctcat
     2701 cgccacggtg aacggatcgc cctaccatct gggcaaacag gctgcccggg agtcggtggt
     2761 ggccgcctcg gctgcctcct cgggccgacc ggtggtctac ttgaacctgg tcggcggcca
     2821 ggaccagttg gtgttcgacg gcgggtcgat ggtggctgac tcttcgggac gaatcgtggc
     2881 ccgggcgccg cgtttcgatg aggccgtggt gatcgtcgat gttgatgcct ccagagctgg
     2941 agccgacccc gtgaacgatc atgcttcccc gcagggcacc gccctgccgg tgatcgaggt
     3001 ttccgaggag gtcgaacggc cggaccatct ggtggtgcct gcgctggccc cactggacga
     3061 gacggccgag ctctacgggg cactggtggc cgccacccgc gggtatgtca tcaagagtgg
     3121 cttcaccgac gtgtgtcttg gcctgtcggg tggcgtggac tcggcgctgg tggccaccgt
     3181 cgcggccgac gccctcggcc cagaccacgt ccacgcggtc ctgatgccgt cgcgttactc
     3241 cagcgaccac tcggtggacg acgcccaggc actggtcgcc tctcagggaa tcgatgccca
     3301 cgtccttccc atcgaggagg cccatttggc tctgaccgga gtattggcca gagccatcga
     3361 ggggggcccg accggcctcg tcgacgagaa cctgcaggct cgtatccgag gcgtgctact
     3421 gatgggcctg tccaatgccc acggatggat ggtgctgacc accggcaaca agagcgagtc
     3481 ggcggtcggc tactcgacgc tgtacggcga cacggcgggg gcctacgcgg tgatccggga
     3541 catctacaag accagggtct atgacctatg ccggtggcgc aacgccggga aaccggggat
     3601 ggacggacag ccggtgattc ccgaacacat cctcaccaag cccccgtcgg ccgagctacg
     3661 tcccgaccag accgacgacc agagcctccc gctgtacgac gtgttggacc cgctgctgga
     3721 ggcctacgtg gagggcaatc gaacccgagc cgaacttgtg gccgatggcc acgaccctga
     3781 tctggtggac cgggtggtcc gcctcgtgga cggagcggag ttcaagcgtc gccaaacgcc
     3841 gctcggtccg aaggtgacca cacgtggttt cggccgcgac cgtcgcatgc cgatcgtcaa
     3901 ccacttccgt gggtgactgc cgtgaccgat gcgccgttgg gtgagggacc gacagcactc
     3961 accaccgagg gtggagcccg cgagttcatg cagttggccg acctctgcga ggcgctggcc
     4021 ggacagttgg gagattggtc gaccgacggg gccgatttcg cttcggccgc cgcgatggcc
     4081 tccctttcgg cgcgtctcac cgagcacgct ggatggtggc gcgaccaggt ccccgagtcg
     4141 gtgttgttgg ccgaggtacg cgacgcagcc tcggacccgg ttcgactggc cgccgtgctg
     4201 gccatgctcg atgtggcgcc ctcggcgcgg acggcggctg tcgccccggt tctggacggc
     4261 gtggtggccc acctagtggg actggccgat cgactctcgc cggtcggtga tgcaccggcg
     4321 cgtcgcgtgc tgcggttggt gctcgccgat ctcgcggacc ggcctcgcta tccatgaacc
     4381 attgttccgt ggcgggctat ccatgacagt ctccatcggt atcgtcatgc ttcgtgacgc
     4441 cggtcacctt ttcgtgttgg catcgagagg gtcgtggata tggtgacggt cgatcggggg
     4501 agtgggggca acgttgtcat ccgacccacc gttcgctctt cggggcgagc cgatcgggtt
     4561 tgttgacagg cgaatgattc ggtgaacgac ggtcccgtaa gacgggccgg atgttccccc
     4621 ggctggagga gacgagggtg gccaaggagc gggtcgaacg ggacgaggaa gacctcgtcc
     4681 ggctgtatct caccgatatt ggtcagtatc cactgctgac caaggagggt gaggttcgcc
     4741 tcgcccagca gatcgaagcg ggcaccgagg gccgggccga gatgtctgcc aagggcgaca
     4801 gcctcacgcc ggtccgcaag cgtgagctga agcgcaatat caagcggggc gaggaggccg
     4861 agcgcacgtt cgtccagtcc aacctccgac tggttgtctc catcgccaag aagtatcagg
     4921 cctccgggct gccgttactg gacctcattc aggaggggaa cctcggtctg atgcacgccg
     4981 tcgagaagtt cgactggcgc aaaggcttca agttctccac ctacgccacg tggtggatcc
     5041 gtcaggccat cacccgtggc attgccaata ccggacggac catccgcctt ccggtgcatg
     5101 ccggcgacac cctggcccgc ttacagaagg cacggtcccg cctcgagctg aagttcggac
     5161 gtcaggccac gcttgctgag ctctcggccg aggtcgagat gcccgaggag aaggtgaccg
     5221 aggcgttgcg cttcgcggcc gaaccgctgt cgttgagcga accgttgcgc gaggacggtg
     5281 atgccgaact aggtgacgtt gtcgaggacc gggcggccga gtcgccgttc gaggtcgcag
     5341 ccacctcgct gctgcccgag gagatcagcc gtctactggc accgctggat acccgtgaac
     5401 gggagatcct gaagttgcgc ttcgggctgg accggggcga gccccgcacg ctcgaggagg
     5461 tcggggagca cttcaacctg accagggagc ggatccgtca gatcgaggcc cgggccatgt
     5521 ccaagctccg tcacccgagc agcgatacag gcgcacgcga cctgctggcg gtctgagaaa
     5581 ccagccacca ggttcggacc gtcccaccaa cgggccggcc gcccgactcg ttcatcgggt
     5641 cgggcggcga ctggcggagg tggacgggaa tcgaacccgc cggacggggg tcgcccgtcc
     5701 cacccgcttt gaaggcgggg gagcccacca ggtactcaga cacctccatc ggtgacggta
     5761 cgggatcggg cgtgatccca ccacttcgca acgggtaact accccgtgcg cgacgcgggg
     5821 tccggaccta gcatgaggac catgaagaag cttgtgatgt tggctgtgct cggcaccttg
     5881 gttgccgtcg cggtcaagaa ggtccgctcg atctagagca cctgacgggt ggctaggcca
     5941 gttggtcttg tcgctcggtc agcccggccg gttcagtcgg cccgccggcg tccgatacgg
     6001 cgcgccaggg ccacaatggc ggccaccatc agagcggaaa gtgtggtcgc cgcgatccag
     6061 ttccgatcaa tgggaacccg gtcccccaag ggcactggat tttcgaactc ccggatcaac
     6121 caaccttgga tctcggccgt ccgacggaga tcccggtcgg ggttcacggc caccggatgg
     6181 ccgaccacgt ccagcatcgg caggtcggtg accgagtccg aatagcccca cgatcccgcg
     6241 aggtcgatgc ctcggtcggc agccagtcgt ttgatggcgt acgccttgtc tgggccttga
     6301 gcgtaaaatt cgacctcccc ggtgtacttg ccgtcagcat cgatctctgg ggtggtggcg
     6361 atgaactcgt cgacaccgag gtgctcggcc agcggggcca cgatctctac tggtgacgcc
     6421 gacaccagga tcagcaggcg cccctcggca cggtggtggg cgaagaggtc gagggcctcg
     6481 tcgtagacaa tgggttcgat gacctcagcc agatggtcac gggcgaaccg cttcagggtt
     6541 tcctgatccc agccggcggc caggcggagg gcggtctggc gggcccgggc catgctcccc
     6601 tcgtcggcgc cgaagaaccg gaacagaacc tgaccccagg cggcccggag ggccattggt
     6661 gcactcaggt agccggcccg atggagtgcc ggcccgtacg cggccatcga cgccctcgcg
     6721 atgaccgtct tgtcgaggtc gaagaaggcc gcctccacga atccgatcct attgcgctgc
     6781 ctcgggtcgg gactgggcac cgtcaggggt tagaccggtt cctgctcctc catcggggtc
     6841 gaacgatcgc gtgggagtgg tgatcgagat ctactggccg gtgaagagcg gacgggggac
     6901 ggcgatgctc gaaaggggtc cgggtagcgg cggacagtcg ccgtcgcacc gggtggagga
     6961 cgcggtgatc gactctgcaa gcttgaatcc gcagaacatc gacgtcaagc gggtggtcga
     7021 tggcgactga acgacggcga ctatccacca cctggttcgg atcgacacgc cgttgatcga
     7081 tccggcgctg cctgatgtgg tgctgaccgc cttggccgtg atgttcctga agtgaggtag
     7141 gcctttctcg acatgacggc ctgacttcag agaagtccgc aggtcgttct tgtgagggac
     7201 cggggtcgga tcggtggtct agcgttggtg gcgaaccgag ccgggccgga tcgaccacac
     7261 ggaggggaat cagacaggtg caactcgacg tcctcagccg tgacctgcgt ccgtccgaca
     7321 cctcggttgg cccggctgcc gtggtgctga ccgtgttggg tgatctcgac atggctggcg
     7381 ctcccagtct tcgtcaggcc gtggtgaccg tggtggacgg tggcgctcgg ctggtggtcc
     7441 tggacttgac ggcggtcgac ttcgtggact cagcgggcct cggcgtggta gtcggcgccc
     7501 ttcggcggct ccgggcacac gacggtgatc tggtggtggt gtgtcctgaa cctcggatac
     7561 gtcgcgtgtt cgagatgtgc gacctcgacc gggtgttcgc tctgcaccgg gacgtggacg
     7621 ctgccgcggc ggccatggat gggcgggcgc tggcatgaac ggggt
//
LOCUS       DASCMR010000143         1517 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000718707, whole genome shotgun sequence.
ACCESSION   DASCMR010000143 DASCMR010000000
VERSION     DASCMR010000143.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1517)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1517)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1517
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000718707"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..445
                     /locus_tag="QGG16_03575"
     CDS             <1..445
                     /locus_tag="QGG16_03575"
                     /inference="COORDINATES: protein motif:HMM:NF013784.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate synthase-related protein"
                     /protein_id="HJP24390.1"
                     /translation="AKAVALGTAALMALNCNKHIEGVTDYEGTIGVPAGECYHCHTGR
                     CPVGVATQDVELRARLDVDEAALRVYNYLHTLTMEVQLLARACGKTNIHSLEPEDLAA
                     LTHEASAMAKVPLAGTTYIPGVSEERALQEMKDMMAKQVAESGRI"
     gene            448..870
                     /locus_tag="QGG16_03580"
     CDS             448..870
                     /locus_tag="QGG16_03580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24391.1"
                     /translation="MGVKHTVAIDAETLAGKRFEYQEDMSLVEDLDLMELTPGGDLNW
                     LEDIHLLVEDGTPAVFDRNSNSFLKIYFDIPEGREDELARKVLMKHLISGNSYGIQLK
                     EKHCKFHQVELGPWVANSKSVGDNWTPPVLEGWEPPAH"
     gene            1028..>1517
                     /locus_tag="QGG16_03585"
     CDS             1028..>1517
                     /locus_tag="QGG16_03585"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJP24392.1"
                     /translation="MTNPGTLPESIRYCIVGAGIHGLSTAWHLARELKARGTGSGDDI
                     VVIEKSAAGAGPSGIACGVVRNNYFQPAMRELMAHSVEVWDANAEAFEYHPVGYLQIS
                     YDEMRDDVLTIHEQQKAIGYESEFIDGEAETHAYMKGIFDDWRATGVSSVLHEKKGGY
                     AHN"
BASE COUNT          311 a          488 c          463 g          255 t
ORIGIN      
        1 cgccaaggcc gtggcactgg gtaccgccgc cctgatggcc ctgaactgca acaagcacat
       61 cgagggtgtg accgactacg agggcaccat cggcgtaccg gccggcgagt gctaccactg
      121 ccataccggc cgctgcccgg tgggcgtcgc cacccaggat gtggagctgc gtgcacgcct
      181 cgacgtcgat gaggccgcac ttcgggtcta caactacctc cacacgctga ccatggaggt
      241 gcagttgctg gctcgtgcct gtggaaagac caacatccac agcctggagc ccgaggacct
      301 ggctgctctc acccacgaag cttcggccat ggccaaggtg ccgctagccg gcactactta
      361 catcccgggg gtcagcgagg aacgggccct gcaggagatg aaggacatga tggccaaaca
      421 ggtagcagaa agcggaagga tctgaccatg ggcgtgaagc acaccgtcgc catcgacgcc
      481 gagacccttg ctgggaagcg gtttgagtat caggaggaca tgtccctggt cgaggacctc
      541 gacctgatgg agttgacccc gggcggtgac ctcaactggc tcgaggacat ccacctactg
      601 gtcgaggacg gcacccctgc ggtgttcgat cggaactcca actcgttcct caagatctac
      661 ttcgacatcc cagaggggcg tgaagacgaa ctggcccgta aggtcctcat gaagcacctc
      721 atctcaggca actcctacgg catccaactc aaggagaagc actgcaagtt ccaccaggtc
      781 gaactcggac cttgggtcgc caattccaag tcggtgggag acaactggac ccctccggta
      841 ctcgagggct gggagccgcc ggctcattag tggccggtac caactccgga cagccccgac
      901 ggactcgtcg atcgtggaga cgccctttcg gtgattccgt gccggcaggt tcgaccacgt
      961 ttccgttgca atccctgaat cccgggtctc tccagagccc gggtcctccc agaaacagga
     1021 gtaccccatg accaaccccg ggacgcttcc cgagtcgatc cggtactgca tcgtcggtgc
     1081 tggcatccat ggtctgtcca ccgcgtggca cctggcccgc gaactgaagg cccgcggcac
     1141 gggcagcggt gacgacatcg tcgtcatcga gaagtcggca gctggtgccg gtccgtcggg
     1201 tatcgcctgc ggcgtggtgc gcaacaacta tttccaaccc gctatgcgtg agctcatggc
     1261 tcactccgtc gaggtgtggg acgccaacgc cgaggccttc gagtaccacc cggtaggcta
     1321 cctgcagatc tcctacgacg agatgcgaga cgacgtgctc actatccatg agcagcagaa
     1381 ggccatcggt tacgagtcgg agttcatcga cggcgaggcc gagacccacg cctacatgaa
     1441 gggcatcttc gacgactggc gggctaccgg ggtcagcagc gtgctccacg agaagaaggg
     1501 tggctacgcc cacaaca
//
LOCUS       DASCMR010000144         4563 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000722459, whole genome shotgun sequence.
ACCESSION   DASCMR010000144 DASCMR010000000
VERSION     DASCMR010000144.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4563)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4563)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4563
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000722459"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..697
                     /locus_tag="QGG16_03590"
     CDS             <1..697
                     /locus_tag="QGG16_03590"
                     /inference="COORDINATES: protein motif:HMM:NF019307.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidase dimerization domain-containing
                     protein"
                     /protein_id="HJP24393.1"
                     /translation="ENITSLAIQQARVVYEGRAAHAAAAPEKGLNALDAMVLGYGNVA
                     ALRQHIAPDERLHGIFIESGDKANIVPRRTVASWYARSPSLAGLEALKVRLVACLEAG
                     ATAAGCGIQVEWIDGGYNEVVDNRALLDRYIANAAAFGRVVEPTISHQVVGSTDMGNV
                     SYLVPGIHPMIKVAPFGTAIHTEDFARYAAEAEADQAIVDGAKVMALTMVDCWTDPSV
                     LDAARAEFAAVHA"
     gene            756..2378
                     /locus_tag="QGG16_03595"
     CDS             756..2378
                     /locus_tag="QGG16_03595"
                     /EC_number="2.1.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050797 - thymidylate synthase (FAD)
                     activity [Evidence IEA];
                     GO_process: GO:0006231 - dTMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent thymidylate synthase"
                     /protein_id="HJP24394.1"
                     /translation="MTTYASEEFSADEADVLRRYFTNLDQPVFALVNLPEVVKGALFA
                     RYSRSDKSLRRLFLEEFVGELDVSGDESIDATVGLRRAEELYDKVFFEYGDDSVAQLG
                     GVHLACEQASNLLTKILEWGRLMAYLEQSTRYIAYDSRLGGRYRYHRDPQILASALGA
                     RYIPDMDRLFDVYADLVREMNEHFRGRIAKAPSDSDFIYRQAVAAKAFDAVRGVLPSA
                     SLSNVGIYGTGQAYESLLVRMRAHPLPEARDYSALMLTELRKVIPSFLKRVDLPDRGD
                     EIGAYSADIRERLEDLAEGYFPAEEPAAGSPTVDLTDFDPDAEVKLVASALYPATNRS
                     DREVEARVRSMTVDQRLSVLRAMVGDRAHRRHRPGRALERPSYRFDVLSDYGAFRDMQ
                     RHRMMTIDWQRLSPDHGYVRPPEVDEAGVGGRFDAAMERSRDLHDALLEPFPEQAPYA
                     VSLAYRVRYMMHMNAREAMHVLELRSTPQGHPSYREVAQQMHRLIGDVAGHHAIAEMM
                     AFVDHSSEPELERLDAERRAEEKRASRDSQTS"
     gene            2516..2998
                     /locus_tag="QGG16_03600"
     CDS             2516..2998
                     /locus_tag="QGG16_03600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24395.1"
                     /translation="MSDTETDEPSSEDLGDPSEDGVELDVDDLDDLNDEVDDDAPGED
                     DPAGADESDESDDEDEDEEGARPVGDPTSDEEEEDDDEVEDDLDAILRDRIAAAADDD
                     EDEDEEEASVKAAAPNVSPGDLVERQDDELHCPHCFLLVQASAVASSGECGHCGGPIS
                     "
     gene            3076..3552
                     /locus_tag="QGG16_03605"
     CDS             3076..3552
                     /locus_tag="QGG16_03605"
                     /inference="COORDINATES: protein motif:HMM:NF025054.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HJP24396.1"
                     /translation="MEESVRLAVLADAEVLGCLAAGARAELPDKKGGDVVQRLDPHRV
                     DPGARVMAAVEDPDATVLLGCIDGTPVGYGLMTVALVSDGSLQATVDELFVDPEARSV
                     GVGEILIETLKADAMERGAVAIQSTALPGDRATKNFFESQGMVARAIIVHRWLDGR"
     gene            3579..3995
                     /locus_tag="QGG16_03610"
     CDS             3579..3995
                     /locus_tag="QGG16_03610"
                     /inference="COORDINATES: protein motif:HMM:NF012514.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HJP24397.1"
                     /translation="MIGRPELCVGAVVVDEDRLLLIRRGTDPGRGRWSLPGGRVEAGE
                     ALVAAVVRELREESGLEGLCGPMLGWVERMGVDHHFVIVNFRVDILDDASPAAGSDAD
                     EAAWTSFDQLETTDLADGLAAFLVDYEVVPNGVLFV"
     gene            complement(4033..>4563)
                     /locus_tag="QGG16_03615"
     CDS             complement(4033..>4563)
                     /locus_tag="QGG16_03615"
                     /inference="COORDINATES: protein motif:HMM:NF012596.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HJP24398.1"
                     /translation="RGGFAGIVRRERTKPIIAAVEGPALAGGFEIVLACDLVVAGSNA
                     RFGIPEVKRSLIANAGGLIRLPRAIPRNLAMEMALTGDPISAETAHHHGVVNRLVEAG
                     GALDSAIALASEISANAPLAVRASRQVIIEGALLDDDEAFALSAEAARDVLRSEDFQE
                     GPRAFIEKRAPNWLGR"
BASE COUNT          808 a         1391 c         1501 g          863 t
ORIGIN      
        1 tgagaacatc accagcctgg cgatccagca ggcccgggtc gtctacgagg gtcgggccgc
       61 tcatgccgcg gcggcgccgg agaagggctt gaatgcattg gatgcaatgg tgttggggta
      121 cggcaacgtg gcggccctcc gtcagcacat cgcaccggat gagcgtctcc acggcatctt
      181 catcgagtcg ggtgacaagg cgaatatcgt gcctcgccgg accgtggcct cctggtacgc
      241 ccgctcaccg tctctggcag gactagaggc gctcaaggtc cggttggtgg cctgtctgga
      301 agccggtgca actgccgcag gatgcggcat ccaggtcgaa tggatcgatg ggggatacaa
      361 cgaggtggtc gataaccggg ccctactcga tcgctatata gccaacgctg cggccttcgg
      421 acgcgtcgtc gagccaacta tcagccacca ggttgtaggc agcaccgaca tgggcaacgt
      481 gagttacctg gtgccgggaa tccatccgat gatcaaggtc gctccattcg ggacggccat
      541 ccacaccgag gactttgctc gctacgcggc agaggccgag gctgatcagg ccatcgtgga
      601 cggagccaag gtcatggcgt tgacgatggt cgactgctgg actgacccct cggtactcga
      661 cgctgcacgg gcggagttcg ccgccgtcca cgcctgagct ggggctgtcg gggcgtccgc
      721 gccgcggggc ctgtcgcggc ataggttcgg cgctcgtgac cacgtatgcc tccgaggaat
      781 tcagcgccga cgaggccgac gtcctccggc gctacttcac gaacctggac cagccagtct
      841 tcgctctggt caatctgccc gaagtggtca agggggcatt gttcgcccgc tattcaaggt
      901 ccgacaagag cctccgacga ctcttcctcg aggagttcgt gggtgaactc gacgtgtctg
      961 gcgacgagag tattgatgcc accgtgggcc tacgtcgtgc cgaagaactc tacgacaagg
     1021 tcttcttcga gtatggcgac gacagcgtgg cccaactcgg gggcgtgcac ctggcctgtg
     1081 agcaggcctc caatctgctg accaagatcc tggaatgggg acgcctgatg gcgtacctcg
     1141 agcagtccac tcgctacatc gcctacgact cccgtctggg cgggcggtac cgctatcacc
     1201 gggatcccca aatcctggcc tcggcgttgg gggcccgcta catccccgac atggatcggc
     1261 ttttcgacgt ctacgccgac ctcgtccggg agatgaacga gcatttccgt ggccgtatcg
     1321 ccaaggcgcc atcggactct gacttcatct accggcaggc ggtagccgct aaggccttcg
     1381 acgccgtccg cggcgtgctt ccgtccgcct cgctgtccaa cgtgggcatc tacgggacgg
     1441 ggcaggccta cgagtcgttg ctggtcagga tgcgggccca tcccttgcct gaggctcgcg
     1501 actattcagc gttgatgttg accgaactcc ggaaggtcat cccatcgttc ctgaaacggg
     1561 tcgacctgcc cgaccggggc gacgagatcg gcgcctattc cgcggacata cgggaacgcc
     1621 tggaggacct ggcggagggc tacttcccgg cggaggagcc ggcagccggt tcgcccaccg
     1681 tcgacctcac cgacttcgat cccgatgctg aggtcaagtt ggtggcttcg gcgttgtacc
     1741 cggccaccaa ccgctccgac cgtgaagttg aggcccgggt tcgttcgatg accgtcgatc
     1801 agcgcttatc tgtcctgcgg gccatggttg gtgaccgggc tcatcgacgt caccgcccgg
     1861 gacgtgcgtt ggagcggcct tcctaccgct tcgatgtgct gtcggactac ggcgccttcc
     1921 gcgacatgca gcgccaccgg atgatgacca tcgactggca acggctcagc ccggaccatg
     1981 gctacgtacg accacccgaa gtggacgaag ccggcgttgg cggtcgcttc gatgccgcca
     2041 tggaacgttc acgtgatctc cacgatgcgc ttctcgagcc tttccctgag caggctccgt
     2101 atgccgtgtc gctcgcctac cgggtgcggt acatgatgca catgaacgcg cgagaggcca
     2161 tgcacgtcct tgagttgaga tctacgccac aggggcaccc gtcgtaccgc gaggtggctc
     2221 agcagatgca ccgccttatc ggcgatgtgg cgggccatca tgccatcgct gagatgatgg
     2281 ccttcgtcga tcattcgtca gaacccgaac tggaacgctt ggacgctgag cgtcgggccg
     2341 aggagaagcg ggcgtcgaga gattcgcaaa ccagttgacg acccggacca gagattcgct
     2401 acccctggtg ttggcgacgc tccagaccgg cccgatgctc cgtggtggat cgcacgggcc
     2461 gagaacctgt ctatgctccc gccgctagcc cataagaaac cttttcgagg ccctgatgag
     2521 tgataccgaa accgacgaac cctccagcga ggatttaggc gacccgtccg aagacggcgt
     2581 tgagttggat gtcgacgacc tcgacgacct caacgacgag gtggacgatg atgctcctgg
     2641 tgaagatgac ccggctggtg ccgatgaatc tgatgagtcc gacgacgaag atgaggacga
     2701 agagggcgcc cgtcctgtcg gtgaccccac ttccgacgag gaggaagagg acgacgacga
     2761 agtcgaggac gatctggatg ccatccttcg cgatcggatc gccgccgccg ctgacgacga
     2821 cgaagacgag gacgaggagg aggcgtcggt caaggcggca gcgcccaacg tctctcccgg
     2881 agaccttgtc gaacgtcagg atgacgaact ccactgtcct cactgcttcc tgttggtcca
     2941 ggcctctgcg gttgcctcat cgggggagtg cgggcattgt ggaggaccga tttcctgaat
     3001 atcgcgctcc ggtgggggcc tacatgggga agagtcgtct gatggaggag cggtcctgat
     3061 gggcgtgtgg gtctgatgga ggaatcggtt cgacttgccg tactggccga tgccgaagtc
     3121 ctggggtgcc tggccgcggg agcgcgggcc gaactgcctg acaagaaggg cggcgacgtg
     3181 gtgcaacgac tggatccgca tcgtgtcgat cccggcgcac gggttatggc cgcggtcgag
     3241 gatcccgacg cgaccgttct cttgggatgc atcgacggaa ctccggttgg ctacggcctg
     3301 atgaccgtgg ccttggtgtc cgacggaagc ctccaggcga cggttgacga gttgttcgtg
     3361 gatccagagg ctcggtcagt gggcgttggc gaaatcctca tcgagactct gaaggctgac
     3421 gccatggagc ggggagcggt ggccatccag tccacggccc tgcctggaga ccgcgccacc
     3481 aagaacttct tcgaatccca gggcatggtg gcaagggcca tcattgtcca tcgatggttg
     3541 gacggtcggt gaaggttccc tcgcctactc accgttcagt gattggccga ccggaactct
     3601 gcgtgggggc tgtggtggtc gacgaagacc ggctgctgct gatccgacgt ggcaccgatc
     3661 cgggacgtgg tcgctggtcg cttccagggg ggcgagttga agccggcgaa gccttggtgg
     3721 cggccgtcgt gcgagaactt cgtgaagagt ccggtctgga gggtctctgt ggcccgatgc
     3781 tggggtgggt ggagcggatg ggtgttgacc accacttcgt gatagtcaac tttcgggtgg
     3841 acatcctcga tgatgcttct ccggccgccg gttccgatgc cgacgaggcg gcctggacgt
     3901 ccttcgatca acttgaaacg actgacctcg ccgacggact ggcggccttc ctcgttgact
     3961 acgaggtggt ccccaacggg gtcctgttcg tctgactggt ggttcgctag tgccggtatc
     4021 ggtgactccg gtttagcgac ccagccagtt gggggcgcgc ttttcgatga aggcccgtgg
     4081 tccctcttgg aaatcctctg agcgtaagac gtcgcgggct gcctcagcac tcagggcgaa
     4141 ggcctcatcg tcgtccaaaa gggcaccctc gatgatcacc tgacgtgacg cccggacggc
     4201 gagcggggca ttggcgctga tctcagaggc caatgcgatg gcactgtcca atgctcctcc
     4261 cgcttccacc aggcggttga ccacaccatg gtggtgggct gtctcggcgc tgatcggatc
     4321 accggtcagc gccatctcca tggccaagtt tcgagggatg gcccgtggca ggcgaatcag
     4381 cccacccgcg ttggcaatga gcgaacgctt gacctccgga attccgaacc gggcattaga
     4441 gccggctact accaggtcac aagccaggac tatctcaaac ccaccggcca gggcagggcc
     4501 ttcgaccgca gcgattatcg gcttggttcg ctcgcgacga acaatgccgg cgaatccgcc
     4561 acg
//
LOCUS       DASCMR010000145         2463 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000722636, whole genome shotgun sequence.
ACCESSION   DASCMR010000145 DASCMR010000000
VERSION     DASCMR010000145.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2463)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2463)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2463
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000722636"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..475)
                     /locus_tag="QGG16_03620"
     CDS             complement(<1..475)
                     /locus_tag="QGG16_03620"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HJP24399.1"
                     /translation="MTQTALSNETIDGRRARRERGRLAVSDAVIDLVGEGNTDPTSEQ
                     VAERAGVSVASLFRYFETLEELRQETLRRYFKRYDHLLQLPDIAESTLEHRTQVLVNR
                     RAKLYETTGPMCRQARRRAPEFPDVDEGLRSVRSMQADQIRQCFAHEMEALSPSAR"
     gene            595..>2463
                     /locus_tag="QGG16_03625"
     CDS             595..>2463
                     /locus_tag="QGG16_03625"
                     /EC_number="3.1.6.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arylsulfatase"
                     /protein_id="HJP24400.1"
                     /translation="MSKPDLPTGTFHGHIGRTFAESEPWFEEPVHPADDSPNVVVVLL
                     DDTGFAQLGCYGSEIDTPHIDELAANGLQFTNFHVTPLCSPTRASLLTGRSQHAVGMR
                     AVSNFQTGFPHQLGHISNHAATVAEVLQAEGYATFCTGKWHLAPMEQCSAAGPFEQWP
                     LGRGFDRFYGFLEGETDQFHPQLVCDNHPIEPPGKAEDGYHLSEDLVDQLLRMVSDSK
                     GVRPDRPFFAYLPFGATHAPHQAPPEYLAKYRGSFDEGWDVVRQRWFQRQIDIGVIPE
                     GTELAPLNPGVEPWDTLPVNQQRLAVRLQEAFAAFLDHTDDQIGRLVAGLRAIGELDN
                     TLLVVLADNGASQEGGPFGVMHEMKFFNGILETPDEAVERIDEIGGPHSHTNYPWGWA
                     QCGNSPFKWYKQNTHEGGVHVPMIVSWPAGIEESQRGTMRGQFTNVADIVPTIYDLLQ
                     ITPPDVFRGRSQLPITGHSFAGVFSDAGAPAPNTLQYFEMAGSRALVAGQWKAVCKHQ
                     EGADYETEPWELYNLSVDASECNDLSGSDPNKLAELVALWWSEAERHGVLPLDDRGMG
                     GLFGARFRDHSPHPPDRRYVYRPPMSPIPGGASAATGGRSFDLTAQVTRASGEDGVL"
BASE COUNT          493 a          775 c          722 g          473 t
ORIGIN      
        1 cacgggcaga ggggctcaag gcctccattt cgtgggcgaa gcattggcga atctgatctg
       61 cctgcatcga ccggacggaa cgcaaccctt cgtcaacatc tggaaactct ggagctcttc
      121 tccgggcctg gcggcacatc ggtccggtcg tttcatacaa ctttgcccgg cggttaacta
      181 gaacctgagt ccgatgttcg agagtgcttt cggcgatgtc cggtagctgc aaaaggtggt
      241 cgtagcgctt gaagtatcga cgaagcgtct cctgcctgag ctcttcgagc gtttcgaaat
      301 agcggaacag ggaggcgacc gagactcctg ctcgctccgc tacctgttcg gatgtcgggt
      361 ccgtattccc ttcgcccaca aggtcgatca ctgcgtcgga cacggcaagg cggccgcgtt
      421 cccgccgggc ccggcggccg tcgatggtct cgttgctcaa agcggtctgg gtcatcagcg
      481 attgcggtgg cattttcgcc ccgtctcctc cttgcagaca ctgagtctag cactccaatc
      541 agatattgat agttagactc tcataagata gattgcatct tgagggagga cactgtgtca
      601 aagccggatc tgccaacagg aaccttccat ggccacatcg gtcgaacgtt tgccgaatca
      661 gaaccctggt ttgaggaacc ggtacaccct gcagatgact cacccaacgt ggtcgttgtg
      721 ctgctggacg acacagggtt cgcccaactc ggttgctacg ggtcagaaat cgatactcca
      781 cacattgacg agttggcggc taacggtctt cagttcacga acttccacgt aactccgctc
      841 tgttcgccga cccgggcctc gctgctcacc ggccggtcgc agcatgcggt cggtatgcgc
      901 gcagtgtcca acttccagac cggatttccc caccagttgg gccacatctc gaaccacgct
      961 gccacggtcg ctgaggtact ccaggctgag ggttacgcga ccttctgcac cgggaagtgg
     1021 cacctagccc ccatggaaca gtgttcggca gccgggccgt tcgagcagtg gccgctgggg
     1081 cgcggatttg accggttcta cggatttctc gagggtgaaa ccgatcagtt ccatccccaa
     1141 ctggtctgtg acaaccaccc gatcgagcca ccgggcaagg ctgaggacgg ctatcacctc
     1201 agtgaggacc tggtcgacca gttgctgcga atggtgtctg acagcaaggg agtccgaccc
     1261 gatcgcccat tcttcgcata cctgcccttc ggtgccaccc acgctcccca ccaggctcca
     1321 cccgagtacc tggcgaagta ccggggctcg ttcgacgagg gttgggacgt tgttcgacag
     1381 cgatggttcc agcgtcaaat cgacataggg gtcatccctg agggaacgga gttggcgccc
     1441 ctgaatcctg gcgtggaacc gtgggacacg ctgcccgtca accagcaacg cctggctgtt
     1501 cggctacagg aagccttcgc cgcctttctc gaccacaccg acgaccagat cggtcgcctc
     1561 gtcgccggtc tccgcgctat tggagaactg gacaacacgc tcctcgtcgt cctagccgac
     1621 aacggcgcct cccaggaagg tggtcccttc ggcgtcatgc acgagatgaa gttcttcaac
     1681 gggatcctcg aaacaccaga cgaggccgtc gaaaggatcg acgagatcgg tggaccacat
     1741 agccacacca actatccgtg gggatgggcc cagtgcggca acagcccgtt caagtggtac
     1801 aagcagaaca cccacgaggg cggcgtccat gtcccgatga tcgtgtcctg gccagccggt
     1861 atcgaagaaa gtcaacgggg gacgatgcgc gggcagttca ccaacgttgc tgacatcgtg
     1921 cccaccatct acgacctcct ccagatcact cccccagacg tgttcagagg ccggagtcag
     1981 ttgcccatca caggccactc gtttgccggg gtcttcagtg atgcaggggc gccggcaccc
     2041 aacacccttc agtacttcga gatggccggc agccgggccc tggtggcagg ccagtggaag
     2101 gctgtctgca aacaccagga gggagcggac tacgaaacag aaccttggga gctctacaac
     2161 ctcagcgtcg atgcatcgga gtgcaacgac ctctccggct cggatccaaa caagttggca
     2221 gaactcgttg cgttgtggtg gtccgaagcc gaacgccacg gagtcctccc actcgatgat
     2281 cgtggcatgg gcggtctctt tggcgcccgg ttccgggatc actcacccca cccacccgac
     2341 aggcgctacg tgtaccggcc accaatgtcg ccaatcccag gtggcgcgag cgcagcaacg
     2401 ggcggacgga gcttcgacct gactgcccag gtcacgagag ctagtggaga agacggcgtc
     2461 ttg
//
LOCUS       DASCMR010000146        13716 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000722644, whole genome shotgun sequence.
ACCESSION   DASCMR010000146 DASCMR010000000
VERSION     DASCMR010000146.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 13716)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13716)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13716
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000722644"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(141..217)
                     /locus_tag="QGG16_03630"
     tRNA            complement(141..217)
                     /locus_tag="QGG16_03630"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(181..183),aa:Pro,seq:cgg)
     gene            complement(321..716)
                     /locus_tag="QGG16_03635"
     CDS             complement(321..716)
                     /locus_tag="QGG16_03635"
                     /inference="COORDINATES: protein motif:HMM:NF012301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HJP24401.1"
                     /translation="MSETAASPTDTLTVLVATDADHVHDEVDAALEGDHTVIRVHTGA
                     EVLAAVAAHGPAMVVLDLQIGNMGGMATCMDLRLEQRADRIPEQRIVMLLDRDADVFL
                     AQQAEADAWMVKPVDALILRRTARDLLAT"
     gene            826..1170
                     /locus_tag="QGG16_03640"
     CDS             826..1170
                     /locus_tag="QGG16_03640"
                     /inference="COORDINATES: protein motif:HMM:TIGR00377.1"
                     /note="This anti-anti-sigma factor, or anti-sigma factor
                     antagonist, belongs to a family that includes
                     characterized members SpoIIAA, RsbV, RsfA, and RsfB;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0045152 - antisigma factor binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor antagonist"
                     /protein_id="HJP24402.1"
                     /translation="MLEITVERHDGYVLCRPAGELDAYTVAQFRESLTDLSVEAFILV
                     DLSDVPFMDSAGLGALIGGIRRARENDGDVAVACNRPALIRLLHTTGFDRIVPVRETV
                     EEAALALGEAGT"
     gene            1300..2601
                     /locus_tag="QGG16_03645"
     CDS             1300..2601
                     /locus_tag="QGG16_03645"
                     /inference="COORDINATES: protein motif:HMM:NF014062.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HJP24403.1"
                     /translation="MRYLFPLSLFRRVLVGLLSMTAVIVLGAPTAGAHSEHEDGVHTP
                     PAVVDVVEVHGFLDPVLVDMLADVLESLDPVETVAVVFQVDSTTSVVDEAELVRLAEL
                     IVAAPVPVSFWVGPSGAEATGPMARLVALGDDIGIAPGAHLGALGESVLGGGFGLPFG
                     LPVDTDLVDRAVGYEEAIERGLARSAPVLLEQLVGVPGFEVRTVDGDDGPSVQPVTPT
                     RFRQLDVVAQFFHTVASPAVAYLLLLIGMGLLVFELYTAGVGIAGVIGAGCFLLSTYG
                     LGVLPARGWAVGVLVFAFVGFAIDVQAGVPRLWSIIGTIALVAGSVFLFEGQSFSWIT
                     LAVGLLGTVAGVVGGMPTMVRTRFSTPTIGREWIIGEEGTAEDELSPNGTVRVRDAVW
                     RATTNRATPVEPGGDIRVTGVDGLWLELEPVDGAARDYRRR"
     gene            2702..2956
                     /locus_tag="QGG16_03650"
     CDS             2702..2956
                     /locus_tag="QGG16_03650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WhiB family transcriptional regulator"
                     /protein_id="HJP24404.1"
                     /translation="MPVNGNFREWQVKAACRGPQAVVFYPPGSGEGRDEKRLRELRAK
                     AICDRCVVVGRCLEFAVGRGETHGIWGGTNESERRVLLEI"
     gene            complement(2964..4682)
                     /gene="selB"
                     /locus_tag="QGG16_03655"
     CDS             complement(2964..4682)
                     /gene="selB"
                     /locus_tag="QGG16_03655"
                     /inference="COORDINATES: protein motif:HMM:TIGR00475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0001514 - selenocysteine incorporation
                     [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HJP24405.1"
                     /translation="MHVVATAGHVDHGKSTLVEALTGTDPDRFAEEKARGLTIDLGFA
                     ATTLPSGAALSLVDVPGHVRFLKNMLAGVGAVDACLFVVAATEGWKPQSEEHLRILEL
                     LGIGHGVIALTKVGPADEDLVDLARLEIIEQVEGTFLEGAAVVATDAPTGLGLDDLRV
                     ALDDLVGVTPTAMDHGRPRLWVDRAFSAKGAGTVVTGTLSGGALRVDDELAIHPAGTA
                     VRVRSLENHHASHLELPPGSRCAVNLVGAAHDEVVRGDVLVRSDQWHHTTVFDASLQV
                     LERLDHPVSRRGAHVLYLGSGEHPVRMRILGPDALEPGSEGSVRIHLPRPLPLLPGDR
                     FVLRESGRSETVGGGEVLDVDPTEKASAARPDRSVDRVVKERGWVDADELERLTGERR
                     DPDVDRWVVNPEMLHGTLERLRDAVDSVGPLGLELSRLNPFERAVAGLLGDAVIEAGR
                     LVPVGAVDPLADHPFVAALAASPFTPPGPDGVDRGELRELVRRGDLIEVEGIFYSASA
                     IDAAARLAARLLVDDPDGFTVSVFREAAGNTRKHAMPLLSHLDSTGITRRRGDVRIAG
                     PRLPVL"
     gene            complement(4686..6068)
                     /gene="selA"
                     /locus_tag="QGG16_03660"
     CDS             complement(4686..6068)
                     /gene="selA"
                     /locus_tag="QGG16_03660"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004125 - L-seryl-tRNA(Sec) selenium
                     transferase activity [Evidence IEA];
                     GO_process: GO:0016260 - selenocysteine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HJP24406.1"
                     /translation="MTRPSESSPGPASDRPPSVDRLARSLADIGLPHPLLVDAARTAV
                     AEAVAAGEPASALVRARELAEATARALLSDVVNATGVLLHTNLGRAPWSPSSGDDRRY
                     TTLEFDLASGSRGSRQDRAPALLARACGAEAAMVVNNCASAVLLVLAALAAGRGVVVS
                     RGEMVEIGGGFRIPNVMAQSGARLVEVGTTNRTRIGDFSAAIASDPDVALTLSVHRSN
                     YRIEGFTESASVAELAALDVPVVADIGSGLLDAACPWLADGPPGWLANEPAARQTLEA
                     GAALVTFSGDKLLGGPQAGIIAGRADLIEACAAHPLARALRPGSLVLQSLQDLALAYL
                     TRDGWSIPFWRMATEPISDLRARAERIAANLTPDLVADTVAVPGGGTLPGVEIPSVGL
                     VLAGDRVAELRAGSPPVVARVTDHSTVLDLRTVHPDDDDVIAAALAGLTPEPTPVQTT
                     TDRTPSSDKR"
     gene            6177..6665
                     /locus_tag="QGG16_03665"
     CDS             6177..6665
                     /locus_tag="QGG16_03665"
                     /inference="COORDINATES: protein motif:HMM:NF008528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FxsA family protein"
                     /protein_id="HJP24407.1"
                     /translation="MLLILFLVFVVTPIVELAVIVQVAGSTGVLNTIGLLVLVSVVGA
                     WLVRREGLGILRRAQAEAAQGRIPGREIVDGLLVLGAGALMLTPGFVTDAVGLALLFP
                     PTRAVIRAMTTRRLTRSMASGGTTFRYGWRGEDPSSGGIIDAGSWEDGTPDGLDEPGR
                     LD"
     gene            complement(6688..7884)
                     /locus_tag="QGG16_03670"
     CDS             complement(6688..7884)
                     /locus_tag="QGG16_03670"
                     /inference="COORDINATES: protein motif:HMM:NF022077.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HJP24408.1"
                     /translation="MEPEPGDETLPGGTSPTEADVLGVLRGVIDPELGTDIVELGMAR
                     AVAIDDDGRVDVTIALTTSGCPLRAQIQRDVRARVADLPGVSSVHLSWDELNAEEKAT
                     AMARARFNVSRNAPDTEVPATTKVLMVASGKGGVGKSSVTVNLAAAMAARGMTVGVMD
                     ADIWGFSIPRMLGVEGRLGGSPEVGKIDPIEVPIGDGVVKVVSMGLLVDNEESALMWR
                     GLILNRAVQHFCEDVAWGPMDYLLIDMPPGTGDVQMGLAKMLPQAEMVVVTTPALAAQ
                     KVAVRVANMGRANYLRIVGVVENMSAYVAPDGSRHELFGAGGGGALAQQVGAPLLGSI
                     PLDGAVATAGDTGRPISLGEGPAADAYREIVEHIVTEAAPPVDMAGCSARLLAAAEDA
                     LDAAGA"
     gene            8002..8322
                     /gene="erpA"
                     /locus_tag="QGG16_03675"
     CDS             8002..8322
                     /gene="erpA"
                     /locus_tag="QGG16_03675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HJP24409.1"
                     /translation="MITLTDDATTKVGQLIAGESEEGLALRVAVRPGGCSGFSYEMYF
                     DTERAEDDLEKAYGDVRVVVDQSSAQLLEGATLDYKDGLNEAGFSIDNPNAQRTCGCG
                     QSFS"
     gene            complement(8395..9360)
                     /locus_tag="QGG16_03680"
     CDS             complement(8395..9360)
                     /locus_tag="QGG16_03680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24410.1"
                     /translation="MQDPTGTEPQPTGRRQVLIGLAAGTLLAACGGRSASTSAGTTAP
                     TATIGSTVSAGWRLGARFADGYVAPSALVAGSAQRAPYVLLGSDGWPMGTEGPDHLDL
                     TVRRAGANGAADGPVVATHTVERHGGDHATPYFPLVFQVDDPGDYVVHLATGTTGDVG
                     IEPHHLRVVGREETTLIQVGDRLPAVATPTRTDPAGVDPICTEPNGPCSFHEVSVAEA
                     LSQPGPVALLVSTPRFCQSDVCGPTVGLLRSALRVQSEPWSAVHAEVYMAPETGDFTT
                     TPTVAALGLAFEPSLVVADLDGIVTAALHFTMDATEVADALATAV"
     gene            9441..11096
                     /locus_tag="QGG16_03685"
     CDS             9441..11096
                     /locus_tag="QGG16_03685"
                     /inference="COORDINATES: protein motif:HMM:NF013923.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HJP24411.1"
                     /translation="MDTPTPEDPLDRGAVRLTVDGQPVEVADDGQTLLDALRGPVGNR
                     SVKDGCSPQGQCGCCTVLVDGQPRVSCVTPLRRVAGRSITTLDGLPEGDGERWADAFC
                     ATGGSQCGFCTPGIIMRFAGLEGSVPDDLPSDHSLGARALSDQAPPDRDRAARALHAH
                     LCRCTGWQTVLDAWEVGVGIRTTDGISSGEPVDRDASARRATLEGRSPQKVGPEVALG
                     RGGFAADTAPVEALVAVPGDGPVDDPGSWVVADTLAAARREAGKVQGRRTTADVVPPL
                     EAPAGNWASVLRTAWVEPAPLETDAAWCMPGSEPVGPLANGGAFGAKVDSPLPAVARV
                     LADAHGSTVLVAPSREDTVQFGPKRPPVAGGASVDGTGILRVVRTSGIVDAVAAVAPG
                     LDVVEVDVVGPPTSPNVRAAGWAEAVVLLTGAGAMTPGQPVVSPAGAEAMATVDDDGI
                     RVIVRCGDPLDEVVLRSYCIGAAHMAWSWITSEGLSVDGDGVVHDLTIRSFGIVRATE
                     TPPVVVEVLPDDGTPINGSDAVFAAVAAATWCHRGCPPDLPTG"
     gene            11186..11560
                     /locus_tag="QGG16_03690"
     CDS             11186..11560
                     /locus_tag="QGG16_03690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019239 - deaminase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rid family detoxifying hydrolase"
                     /protein_id="HJP24412.1"
                     /translation="MSNTAGPYTPVVRAGDLLFVSGQVGIVDGSTVDGPVAGSLAGDG
                     LEAQATQALANLRAQVEANGAMLDQVVKTTVFLTDMGNFAAMNEIYCEAFGDSRPARS
                     CVAVAALPLGAIFEVEAIVYVG"
     gene            11629..11814
                     /locus_tag="QGG16_03695"
     CDS             11629..11814
                     /locus_tag="QGG16_03695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24413.1"
                     /translation="MLGAVLMILLLVVVMPVGILMTGALAAALLGGVLKKDVDTTHEG
                     SELLELSETDPWAGLGG"
     gene            complement(11845..12525)
                     /locus_tag="QGG16_03700"
     CDS             complement(11845..12525)
                     /locus_tag="QGG16_03700"
                     /inference="COORDINATES: protein motif:HMM:NF012698.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HJP24414.1"
                     /translation="MDPLLVFPNPPPPELAQCLDLDGWSWKAVANADAAMAEEPDEGW
                     SGAVVVADTDPEGAFALCRRLRKVEMPLQPLLVLVGGGQLDALELRDDLFDDFRLTPL
                     RPAELRARIEHLFSRTGRGTRPELVEYGPLALNLETYQAAIDGEPLDLTYMEYELLKF
                     LAAHPGKVFTRETLLSRVWGYDYYGGARTVDVHIRRLRAKLGEEHANLIHTVRSVGYR
                     FGQSRWGV"
     gene            complement(12637..>13716)
                     /locus_tag="QGG16_03705"
     CDS             complement(12637..>13716)
                     /locus_tag="QGG16_03705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase"
                     /protein_id="HJP24415.1"
                     /translation="PAEPSGTIFCDITNLDGTSFEGDPRQVLRRNVDRARAAGFEMFC
                     APEVEFFYFADSGPDPQPLDRASYFDLTTTDVASDLRKQTLHMLEALSIPVEYSFHED
                     GPSQHEIDLQYTEALSMADSIMTLRLAVKKIAMDRGVYATFMPKPLNGVQGSGMHTHL
                     SLFQDGQNAFHDPDATDGLSATARSFIAGLLHHAREITAVTNQLVNSYKRINEGYEAP
                     RYVSWARNNRSALVRVPIPKPGKVDSTRVEYRALDPACNPYLAFSVLLAAGLRGIEND
                     LELSPEAAVNLYDLSRDEQRELGVDSLPGNLNEALDEMEASELVREALGDHIFEWFLR
                     NKRAEWSEYQRQVTPFELDTYLPNW"
BASE COUNT         2130 a         4386 c         4791 g         2409 t
ORIGIN      
        1 cgacggttac gacacggacg gtcaggcgta tgacaggaag tcttagtgag ctgttaggtc
       61 ggcacccttt tcggttcggg ttggtcaccc tgtgtggtcg aaacctgccg agccgttttc
      121 aataacctgc cgagaccccc tggtcgggta ggcgggattt gaacccacga cctcctcgtc
      181 ccgaacgagg cgcgctacca agctgcgcca ctacccgttt cagcgggcaa gggtaccggc
      241 gccctacggg gaccggtcgt gaccaccggg ccagttcgga tggccccggt caggtcgccg
      301 tccgtggatc acgggtgtgt tcaggtggcg agtaaatcgc gggcggtgcg tcgcaagatg
      361 agggcgtcga ccggcttgac catccaggcg tctgcctcgg cctgctgtgc caggaagaca
      421 tccgcatcgc ggtccaggag catcacgatc cgttgctcgg ggatccgatc ggcccgctgc
      481 tcgaggcgaa ggtccataca agtggccatg ccacccatgt ttccgatctg gaggtcgagc
      541 accaccatcg ccggtccgtg ggcggccacc gcggccagca cctcggctcc ggtgtgcact
      601 cggatcaccg tgtggtcgcc ctccagagca gcatccacct cgtcgtggac gtggtcggca
      661 tcggtggcca cgagaaccgt caaagtatcc gtcggtgagg cagcggtctc gctcatgggc
      721 gggagcgtac cgggggggtc ggtgaccgtt accgcccgcc gccgactacg ttgcccccaa
      781 cggacgtgct ctccgcgcac gtcgatcggt caggaggcga cccggatgct tgagatcacg
      841 gtcgaacgac atgatggcta tgtcctgtgc cgaccagccg gggaactcga cgcctacacg
      901 gtggctcagt tcagggagtc gttgaccgat ttgtctgtcg aggccttcat cctggtcgat
      961 ctctccgatg tcccgttcat ggactccgct ggcctaggtg cgctcatcgg tggtatccga
     1021 cgtgcccggg agaacgacgg agacgtggcc gtggcgtgca atcgcccggc gttgattcgc
     1081 ttgctgcaca ccaccggctt tgatcggatc gtgccagtgc gtgaaaccgt cgaggaggcc
     1141 gcactggcgc tcggcgaggc tggtacctga ccagtagttc tgagggatac gacccacgga
     1201 gatccaccag ccggagcagg ttgacccggg caggttgcca acgcacaccg gtccgtaggc
     1261 ttgcccgact cgttgtctta ccctcctccc ggacccgtga tgcgatacct ctttccgctc
     1321 tcccttttcc gacgtgtgct cgttggcctg ctgtccatga cggccgtcat cgtgttgggc
     1381 gcgccgaccg ctggcgcgca ttccgaacac gaggacgggg tgcatacccc gccggccgta
     1441 gtcgatgtcg tggaggtcca tggcttctta gacccggtac tggtcgacat gctggccgac
     1501 gtcctggagt ccctcgatcc agtcgaaacg gtggccgtgg tcttccaggt cgacagcact
     1561 acttcggtgg tcgatgaggc cgaactggtt cgtctcgccg aactgatcgt cgccgcaccg
     1621 gtaccggtct cgttttgggt cggcccgtcg ggcgctgagg ccaccgggcc gatggcccga
     1681 ctggtcgccc ttggcgacga catcggcatc gcgccgggtg ctcacctcgg ggcactgggc
     1741 gagtccgtgt tgggcggtgg cttcggcctt cctttcggcc tgcccgtcga tactgatctg
     1801 gtggaccggg ccgtgggcta cgaggaggcc atcgaacggg gcctggctcg ctctgcaccg
     1861 gtgctcctag aacagctggt gggcgtgccc ggcttcgagg tccgaacggt tgacggcgac
     1921 gatggccctt cggtccagcc ggtcaccccg acccgctttc gtcaactcga cgtcgtggca
     1981 cagttcttcc atacggtggc cagcccggcg gtggcgtacc tgctcctgct gatcggcatg
     2041 ggtctgctgg tcttcgagtt gtacacggct ggggtgggca tcgccggtgt catcggcgcc
     2101 gggtgtttcc tcctttcgac ctatggcctc ggcgtgctcc ctgctcgggg ttgggcggtg
     2161 ggcgtcctcg tcttcgcttt cgtgggtttc gctatcgacg tccaggccgg tgtaccgcgt
     2221 ctctggtcga tcatcggaac aatcgccctg gtggccggct cggtgttcct cttcgaggga
     2281 cagtccttct cttggatcac tctggccgtc ggcctgttgg gcacggtggc tggtgtggtg
     2341 ggcggaatgc cgaccatggt ccggacccgg ttctcaacac ccaccatcgg tcgggagtgg
     2401 atcatcggcg aggaggggac tgccgaggac gagctctcgc ccaatggcac tgtccgggtg
     2461 cgcgacgccg tgtggcgggc caccaccaac cgggccaccc cggtggaacc cggtggcgac
     2521 atccgggtga ccggggttga cggcttgtgg ctggagctcg agcctgtcga cggcgccgcc
     2581 cgcgactatc gacgtcgctg agttagctgg cagttcaccc ttgtcccggc cggcacgcgc
     2641 gtcataggtt cgtcgcctac ggcccgatcg gacgggccga cagaccacga ggggtgtgcg
     2701 gatgccggtt aacggcaact tccgagagtg gcaggtgaag gcagcttgtc gaggaccgca
     2761 ggccgtggtg ttctacccgc cgggcagcgg tgagggccga gacgagaagc gtcttcggga
     2821 actccgggcc aaggcgatct gtgatcgctg tgtggtggtc ggacggtgtc tcgagttcgc
     2881 tgtgggccgt ggcgaaaccc atggaatctg gggtggtacc aatgagtctg aacgtcgggt
     2941 gctgctcgag atctgaaact gtgtcagaga acggggaggc gtgggccggc gatccggacg
     3001 tcgccgcgcc gtctggttat gccggtgctg tctagatggg acaacaacgg catggcgtgc
     3061 ttacgggtgt tgcccgccgc ctcccggaat accgagacgg tgaatccgtc gggatcgtcg
     3121 accagtagcc gggcggccag ccgggcggcc gcatcgatgg ccgaggcgga atagaagatt
     3181 ccctccactt cgatcaggtc gccgcgtcgg accagttccc gtagctcgcc gcggtcgacc
     3241 ccgtccggtc caggtggggt gaacggtgag gcagccaggg cggccacgaa cgggtggtcg
     3301 gccagcggat cgacggctcc caccggaacc agccggccag cttcgatcac cgcatctcct
     3361 agaagcccgg cgacggcccg ctcaaaggga ttcagccgag acagttcgag acccagcgga
     3421 ccgacggaat caacggcgtc tcgcagcctt tcgagcgtcc catggagcat ctcgggattg
     3481 acgacccaac ggtcgacgtc aggatctcta cgttcaccgg tgagtcgttc caactcgtcg
     3541 gcgtccaccc agccccgctc tttcaccacc cggtccacgg agcggtcggg tcgggcggcg
     3601 gaggcctttt cggtcggatc tacgtcgagt acctcgcccc cgcccaccgt ctccgaccga
     3661 cccgattcgc gtaggacgaa ccggtcacct ggcagtaggg gaagtggtcg gggcaggtgg
     3721 atccggaccg aaccctcgga tcctggctcg agggcatcgg ggccgaggat gcgcatcctc
     3781 accgggtgct cacccgagcc gaggtagagg acgtgggcgc ctcgtcttga gaccgggtgg
     3841 tcgagccgct ccagcacctg gagtgaggcg tcgaacaccg tcgtgtggtg ccactggtca
     3901 gatcgaacga gtacgtcacc gcggaccacc tcgtcatggg cggccccgac caggttgacc
     3961 gcacaccggc taccgggagg caactcgagg tggctggcgt ggtgattctc tagtgatcgc
     4021 acccggacag cggtacccgc ggggtggatg gctaactcat cgtcgacccg cagggcacca
     4081 ccggagagag tgccggtgac gacggtgccg gcacctttgg cggagaaggc acggtcgacc
     4141 cacagacggg gcctgccgtg gtccatagcg gtgggcgtaa cgcccaccag gtcgtcgagg
     4201 gcgactcgca gatcgtcgag gccgagcccg gtcggtgcgt cggtggccac caccgcggcc
     4261 ccttcgagaa acgtgccctc cacctgctcg atgatctcca gacgggccag gtcgaccagg
     4321 tcctcgtcgg ccgggccgac cttggtcagg gcgatcacgc cgtggccgat gcccagtagt
     4381 tcgaggatcc gcaggtgttc ctcggactgg ggtttccagc cctcggtggc cgccaccacg
     4441 aataggcagg cgtccacggc acccaccccg gccagcatgt tcttaaggaa ccgaacgtgg
     4501 ccagggacgt cgactagcga cagggcggcc cccgagggca acgtggtggc tgcgaacccc
     4561 aggtcgatgg tcaggccccg ggccttctct tctgcgaacc ggtcgggatc ggttcccgtc
     4621 agggcttcga cgagggtcga cttgccgtgg tcgacgtggc ccgccgtggc aacgacgtgc
     4681 accggtcagc gcttgtcgct agagggggtg cggtcggtgg ttgtctgcac gggggtcggc
     4741 tcgggtgtca ggccggcgag ggctgcagcg atcacgtcgt catcgtcagg atgcacggtc
     4801 cggaggtcaa gcacggtgga atggtcagtc acccgggcca ccacgggggg tgaaccggca
     4861 cgcaactcag ccacccggtc accggcgagg accagtccga ccgaagggat ctccacgccg
     4921 ggcagtgttc ccccgccagg cacggccacc gtgtcggcga ccagatcggg tgtcagattg
     4981 gcagcgatcc gttccgcgcg ggcccgcagg tcggagattg gctcggtggc catacgccag
     5041 aacggaatgg accagccgtc ccgggttaga taggccagtg ccaggtcctg aagagactgc
     5101 agcacgaggc ttcccgggcg aagggcccgg gccaacggat gagcggcgca cgcctcgatg
     5161 aggtcggctc gaccggcgat gatcccagcc tggggtccgc ccagcagctt gtcgcccgag
     5221 aacgtcacca acgccgctcc ggcctccagt gtctgacggg ctgccggctc gttggccagc
     5281 caccccggtg gaccgtcagc caaccacggg caggcggcat ccaacaggcc cgacccgatg
     5341 tcggccacta ccggcacgtc tagagcagcc agttcagcca ccgacgccga ctcggtgaag
     5401 ccttcgatcc ggtagttgga ccggtggacg gacaaggtca gggccacgtc ggggtcggac
     5461 gcgatggcgg ccgaaaagtc accgatgcgg gtccggttgg tagtcccgac ttcgaccaga
     5521 cgggcacccg actgggccat cacgttgggg atccggaagc cgccaccaat ctcgaccatc
     5581 tcgccgcgtg acaccaccac tccccgcccg gcagccagag cagccagcac gagcaagaca
     5641 gcggatgcgc agttgttgac caccatggcg gcctcggcgc cgcacgcccg ggccagcagc
     5701 gcgggggccc gatcttgccg agaaccccgt gaaccactag ccagatcgaa ctccagcgtc
     5761 gtgtagcgcc gatcgtcgcc tgaagaaggg ctccagggtg cccggcccag attggtatgc
     5821 aacagcacgc cggtggcgtt gaccacgtcg gacaggaggg cccgggccgt ggcctcagcc
     5881 agctcgcggg cccgaaccag ggcactggcc ggttcgcccg cggccaccgc ttcggccacc
     5941 gcggtgcggg ccgcgtcgac cagtaggggg tggggcaggc cgatgtcggc cagcgatcgg
     6001 gccagacggt cgacgctggg gggccggtca gaggccgggc cgggggaact ttctgagggg
     6061 cgggtcatgt agtcgcgagg ataggcggat ggttcccgtc cgggcccggc tcgccgtgtt
     6121 ccctccacag ggccccgcat cggggtaccc gtatcgggcc gctctaacat gcggccgtgc
     6181 tcctgatcct gttcctggtg ttcgtagtga caccgatcgt ggagttggcc gtcatcgttc
     6241 aggtagcggg ctcgaccggg gtactgaaca ccattgggtt gctggtgctg gtcagtgtgg
     6301 tgggcgcgtg gctcgtaaga cgtgagggcc tcggcatcct gcgtcgggcc caggcggagg
     6361 cggctcaggg ccggatcccc ggccgcgaga tcgtcgacgg tctgctggtt ctgggtgccg
     6421 gtgctctcat gctcaccccg gggttcgtaa ccgatgctgt tggcctggcc ctgctgtttc
     6481 cgccgacacg ggccgtgata cgggccatga ccacccgccg gctgactcgt tcgatggcca
     6541 gcgggggtac cacctttcgg tacgggtggc gtggcgagga tccctcgtcc ggaggaatca
     6601 tcgacgccgg ctcctgggag gacgggactc ccgacggact ggacgagcca ggtcggctcg
     6661 actgagttgt gttgtacgga ttctggctca ggccccggcg gcgtccagag cgtcctcggc
     6721 ggcggccaga agccgggcgc tgcagcccgc catgtctacc ggtggagccg cctcggtgac
     6781 gatgtgttcc acgatctccc ggtaggcatc ggccgccgga ccctcgccga gggagattgg
     6841 gcgaccggta tcgccggcgg tagccaccgc cccgtccagc gggatgcttc cgagcagtgg
     6901 ggctccgacc tgctgggcca gagcgccacc gcctccggcg ccgaacagtt catggcggct
     6961 gccgtcgggt gccacgtagg cactcatgtt ctcgaccact ccgacgattc gcaggtagtt
     7021 ggcccgcccc atgttggcca cccgcacggc caccttctgg gcggccaggg ccggtgtggt
     7081 caccaccacc atctcggcct gcgggagcat cttggctaga cccatctgta cgtccccggt
     7141 acctggcggc atgtcgatca gcaggtagtc catcgggccc caggccacgt cttcgcagaa
     7201 gtgctggacg gcccggttca ggatcaggcc ccgccacatg agggccgact cctcgttgtc
     7261 gacgagaagc cccatcgaca cgaccttcac gacgccgtcc ccgattggga cctcaatggg
     7321 gtcgatcttg ccaacctcgg gagacccacc gaggcgaccc tcgacgccca gcatgcgtgg
     7381 tatcgagaag ccccagatgt cggcatccat gacgccgacg gtcatgcccc gggcggccat
     7441 ggcggcagcc aggttcacgg tcactgacga cttgccgacg cctcccttgc ccgaggccac
     7501 catcaggacc ttggtggtcg ccggcacctc ggtgtcgggg gcgttgcggc tcacgttgaa
     7561 tcgggcccgg gccatggccg tggccttctc ttcggcgttg agttcatccc acgagaggtg
     7621 gactgacgac acgccgggca ggtcggcaac ccgggcccgg acgtcgcgtt ggatctgggc
     7681 acggagagga caacccgagg tggtcagggc aatggtgacg tcgactcgac cgtcgtcgtc
     7741 gatagccacg gcacgggcca tgcccaactc gacgatgtcg gtgcccaact cgggatcgat
     7801 gacgccccgg agcacgccga ggacatcggc ctcggtcgga ctggtgccgc ccggaagcgt
     7861 ttcatccccg ggttcaggct ccatgccgcc atgttatgag catgcccgct ggccgacggc
     7921 gtcggatcct ccgtggccat cggggtaggg ccgtgggtaa actgttcata ccgacagtca
     7981 ccgcaacttc gggaggaatc gatgatcacg ttgaccgacg atgccaccac caaggtgggt
     8041 cagctcatcg ctggtgaatc tgaagagggc ctggctctgc gggtggccgt tcgccccggt
     8101 gggtgctcgg gcttcagcta cgagatgtac ttcgatactg agcgggccga ggacgaccta
     8161 gaaaaggctt acggcgacgt gcgagtggtg gtcgaccagt cgagcgccca actgctcgag
     8221 ggcgccacgc tggactacaa ggacggcctg aacgaggccg ggttctcaat cgacaacccg
     8281 aacgcccagc gaacctgcgg ctgcggtcag tcattcagct gagtaaccag acattctgat
     8341 cgccttgcgg ggcgaccact tgccggcgcc ccgtggcgac ggctttcgtg gttttcagac
     8401 agcggtggcc agggcgtcag ccacctcggt tgcgtccatg gtgaagtgaa gggctgcggt
     8461 gacgatcccg tcgaggtcgg ccaccacgag gcttggttcg aaggccaggc cgagcgccgc
     8521 cacggtcggc gtggtggtga agtccccggt ctctggagcc atgtagacct cggcatgtac
     8581 cgccgaccag ggctcagact ggacccgcag ggctgagcgg agtaggccga cggtcggtcc
     8641 gcagacgtcg gactggcaaa accgcggtgt ggagaccagt agcgcgacgg ggcccggttg
     8701 gctcagcgct tcggcgacgg agacctcatg gaacgagcac gggccgttgg gctcggtgca
     8761 gattggatcg acgcctgctg gatcggtccg agtcggggtg gccaccgccg gaagtcggtc
     8821 tcccacctgg atgagcgtgg tctcctctcg gccgacaact cgaagatggt ggggctcgat
     8881 cccgacgtct ccggtggttc cagtagccag gtgtacgaca tagtcgcccg ggtcgtcgac
     8941 ctggaacacc agcgggaagt acggggtggc gtggtcgccg ccgtggcgtt cgacggtgtg
     9001 agtggccacc accggtccgt cggcagcgcc gttcgcacct gcgcgtcgga cggtgaggtc
     9061 cagatggtcc ggcccctcgg tgcccatggg ccagccgtcc gatcccagga ggacgtaggg
     9121 cgcgcgctgg gctgaaccgg cgactagggc gctgggggcc acgtacccgt cggcgaaccg
     9181 ggcgcccagc cgccagccgg cagagacggt cgaaccgatg gtcgcggtcg gggcggttgt
     9241 cccagccgag gtgctggcgg agcgaccacc gcaggcggcc agaagcgtgc cagcggccag
     9301 cccgatcagg acctgacgcc gacccgtcgg ctgtggttct gtgccggtgg ggtcctgcat
     9361 ggttggtgac cgtagtggtg agatcggtga ccgtagtggt gaggtcggtg accgtagtgg
     9421 tgaccgggca cactcctcgg atggacacgc ccaccccgga ggacccgctg gaccggggag
     9481 cggtgcgtct gactgtcgac ggtcaaccgg tcgaggtggc cgacgacggc cagacgctgc
     9541 tcgatgcact tcggggtcca gtcggtaatc ggtcggtcaa ggatgggtgc agcccccaag
     9601 gccagtgtgg ctgttgcacc gtgttggtcg acggtcagcc cagggtgtca tgcgtgaccc
     9661 cgttgcgacg cgtcgctgga cggtcgatta ccacgctgga cggtctaccc gagggcgacg
     9721 gtgaacggtg ggctgacgct ttctgtgcta ccggtggcag ccagtgcgga ttctgcacgc
     9781 caggcatcat catgcgtttc gccgggctgg agggctcggt tcccgatgac ttgccgagcg
     9841 accattctct gggtgctcgg gccctgagcg atcaggctcc gccggaccgc gatcgtgcgg
     9901 cccgcgccct gcacgcccat ctctgtcgct gtaccggttg gcagaccgtg ctcgacgcct
     9961 gggaggtcgg cgttggcatc cggacgacgg atgggatctc gtcgggcgaa cccgtcgacc
    10021 gggacgcttc agcccgtcgg gccacccttg agggacgtag tcctcagaag gtgggccccg
    10081 aggtggcgct cggtcgtggt gggtttgcgg ccgacaccgc tccggtcgag gccctggtcg
    10141 ccgtgcccgg tgacggaccg gtcgacgatc ccggctcctg ggtggttgcc gacacgctgg
    10201 ccgctgcccg ccgggaagca ggcaaggtcc agggccgtcg gaccacggcc gacgtcgtgc
    10261 cgccgttgga ggcccccgcc ggtaattggg ccagtgtcct gcgaaccgcg tgggtcgaac
    10321 cggctccgct ggagaccgat gctgcctggt gcatgcccgg aagcgaaccg gtcgggccct
    10381 tggccaacgg cggggccttc ggggccaagg ttgattctcc actgcccgcg gtagcccggg
    10441 ttctggccga cgcccatggt tcaaccgttc tggtcgcccc atcgcgggag gacaccgttc
    10501 aattcggtcc taagcgtccc ccggtggccg gcggggcctc ggtggatgga accggcatcc
    10561 tccgggtggt tcgcacctcg gggatcgtcg atgcggtggc tgccgtggca cccggtctgg
    10621 acgttgtcga ggtcgatgtg gtcgggccac cgaccagccc caacgtgcgg gctgccggct
    10681 gggctgaagc cgtggtcctt ctcactggtg ctggagcgat gacgcccggc caacctgtgg
    10741 tgtcacccgc cggcgccgaa gccatggcaa ctgtcgacga cgatggcatc cgggtcattg
    10801 tccggtgtgg cgacccgctc gatgaggtgg tgctgcggtc ctactgcatc ggtgcggccc
    10861 acatggcgtg gagctggatc acctcggagg gcttgtcggt cgatggtgat ggtgttgtcc
    10921 acgacctgac catccggtcc ttcggcatcg tccgggcgac ggagaccccg ccggtcgtcg
    10981 tcgaagtgct gcccgacgac ggtacgccga tcaacggatc ggatgccgtg ttcgccgcgg
    11041 tggccgctgc gacgtggtgt cataggggat gccctccgga cctgccgacc ggctagccat
    11101 ccgtcgggtt gtggaaggat ccagaaccca cccacgaatc ctgtcccctt cgagcaaccc
    11161 agtccccgag caaaggagtt cttccatgag caacaccgct ggcccctaca cccccgtcgt
    11221 ccgcgccggc gatctgctgt tcgtcagcgg gcaggttgga atcgtcgatg gcagcaccgt
    11281 tgatggtccg gttgccggca gcctcgccgg ggacggtctt gaagcccaag ccacccaggc
    11341 gttggccaac ctgcgggctc aggtcgaggc aaacggagcg atgctcgatc aggtggtcaa
    11401 gaccacggtg ttccttaccg acatgggcaa cttcgcggcg atgaacgaga tctactgtga
    11461 ggcgttcggt gacagccgtc cggcccgttc gtgcgtggcc gtggccgccc tacccttggg
    11521 cgccatcttc gaggtggagg ccatcgttta cgtcggctga accgttggcc gtagcggtcg
    11581 acggcgcgag agtgcgccgg ccacggtccg agatggcaga ctgcggccat gctcggtgcc
    11641 gtcctgatga tccttctgct cgtcgtggtg atgccggtcg gcatcctgat gaccggtgcg
    11701 ttggctgccg ctctgctggg tggcgtactc aagaaggacg tggacaccac ccatgaggga
    11761 tcggaactgc tcgaactgag cgagaccgat ccttgggcgg ggctcggagg ctgacggcta
    11821 gagggttggc cgcgtgtgct ggggtcagac gccccagcgg gactggccga accggtagcc
    11881 caccgatcgc actgtgtgga tcaggttggc gtgttcctcg ccgagcttgg cccggagccg
    11941 ccggatgtgg acgtcgacgg ttcgggcgcc tccgtagtag tcgtagcccc atacccggct
    12001 caacagggtc tcgcgggtga acaccttgcc gggatgggcg gccagaaact tgagtagctc
    12061 gtattccatg taggtgaggt cgagcggctc gccgtcgatg gcagcctggt aggtctcgag
    12121 gttcagggcg agtggcccgt actccaccaa ctccgggcgc gtgccacggc cagtccgcga
    12181 gaacagatgc tcaatccgag cccgcagttc agcaggacgc aacggggtca gacggaagtc
    12241 gtcgaagaga tcgtcgcgaa gttcgagggc gtcgagttgg ccacctccca ccaggaccag
    12301 cagcggctgc agcggcatct ccaccttgcg gaggcgccga cacagtgcga acgccccttc
    12361 ggggtcggtg tcggccacca cgaccgcacc tgaccaaccc tcgtcgggtt cctcggccat
    12421 ggcggcgtcg gcgttggcaa cggctttcca ggaccacccg tccagatcca ggcattgggc
    12481 cagttccggt ggtggaggat ttgggaagac gaggagaggg tccatggtgg ttccgcgggt
    12541 caccgttggt gtccagcgct ctcagtctgc ctgttcgact ccgtccgtgc ctctacggga
    12601 ttcaggcagg gctccagagg gggctcgctt tcggactcac cagttgggga ggtacgtgtc
    12661 gagttcgaac ggcgtgacct gccgctggta ctcgctccac tcggcccgct tgtttcgcag
    12721 gaaccactcg aagatgtgat cgccgagggc ttcgcgcacc aactcagagg cctccatctc
    12781 gtccagcgcc tcgttcaggt tgcccggaag gctgtctacg ccgagttctc gctgctcgtc
    12841 acggctcagg tcatagaggt tcaccgctgc ttcgggggac aactccaggt cgttttcgat
    12901 gccccggagg ccggcggcca gtagtaccga gaaggcaagg tacgggttgc acgccggatc
    12961 caacgcccgg tattcgaccc gggtcgaatc caccttgcct ggcttgggaa tgggaacccg
    13021 gacgagtgcc gaccggttat tgcgtgccca tgagacatac cgcggcgcct cgtagccctc
    13081 gttgatccgc ttataggagt tgaccaactg gttggtgacc gcggtgatct cccgggcgtg
    13141 gtgcagcaga ccggcgatga acgacctcgc ggtggccgac aggccatccg tcgcatcagg
    13201 gtcgtggaag gcgttctgcc catcctgaaa caacgacagg tgggtatgca tgcccgagcc
    13261 ctgaacgccg ttgaggggct tgggcatgaa cgtggcgtac accccgcggt ccatagcgat
    13321 cttcttcacg gcgagacgca gcgtcatgat cgagtcggcc atggataggg cctcggtgta
    13381 ctggaggtcg atttcgtgct ggctggggcc gtcctcgtgg aaggagtact ccaccgggat
    13441 ggatagggct tcgagcatgt gaagggtctg cttgcggagg tccgacgcca cgtcggtggt
    13501 ggtcaggtcg aagtacgacg cccggtcgag cggctggggg tcgggtcccg aatcagcgaa
    13561 atagaagaac tcgacctctg gcgcacagaa catctcgaag cctgcggccc gggcccgatc
    13621 cacgttgcga cgcagtacct ggcgggggtc gccttcgaac gaggtcccgt cgaggttggt
    13681 gatgtcacag aagattgtcc ccgacggttc ggccgg
//
LOCUS       DASCMR010000147         9523 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000724490, whole genome shotgun sequence.
ACCESSION   DASCMR010000147 DASCMR010000000
VERSION     DASCMR010000147.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 9523)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9523)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9523
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000724490"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(112..188)
                     /locus_tag="QGG16_03710"
     tRNA            complement(112..188)
                     /locus_tag="QGG16_03710"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(152..154),aa:Arg,seq:acg)
     gene            complement(279..372)
                     /locus_tag="QGG16_03715"
     tRNA            complement(279..372)
                     /locus_tag="QGG16_03715"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(334..336),aa:Ser,seq:gct)
     gene            434..521
                     /locus_tag="QGG16_03720"
     tRNA            434..521
                     /locus_tag="QGG16_03720"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:468..470,aa:Ser,seq:tga)
     gene            complement(545..1492)
                     /gene="pheA"
                     /locus_tag="QGG16_03725"
     CDS             complement(545..1492)
                     /gene="pheA"
                     /locus_tag="QGG16_03725"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: protein motif:HMM:NF008865.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HJP24416.1"
                     /translation="MDDLAPPDLSRLAYLGPAGTFTEQALFTQGDLTGLDLRPAPSIP
                     DVFRQVVAGEADLGFAAIENSIEGSVNVTQDTLAFDVDLLIQREVVISIQLNLMVAPG
                     TTLADVDRVCSYPHAIAQCRGWLSEHLPNAEVQASNSTADAARLLAATPDGHTAAIAP
                     GRAAEAYGLEVLAADIEDHPENQTRFVLVAPDGIPASTGHDKTSLVVFQRADRPGSLL
                     GILQEFAARSINLTRLESRPTKRGLGDYCFLMDLEGHVADELVADCLRNLQMKHGEVK
                     FLGSYPAAGTNGAQVRAEATVASRSADDWLTDLRGRIRS"
     gene            1512..2327
                     /gene="larB"
                     /locus_tag="QGG16_03730"
     CDS             1512..2327
                     /gene="larB"
                     /locus_tag="QGG16_03730"
                     /inference="COORDINATES: protein motif:HMM:NF033503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel pincer cofactor biosynthesis protein
                     LarB"
                     /protein_id="HJP24417.1"
                     /translation="MDPDARHQLPLYDLPLSELMAGVAEGTISPDDAVRRLSRLPFVD
                     VGVARIDHHRALRQGLPEAVYAPGKSAEDVAIVVSELLDHGTGPVVLSRADKVQTAAA
                     LGVDASGTVLGHTVVWRRAVDRGDRVLVVTAGTADAPVADECAAVLWAHGIDADRLSD
                     VGVSGIHRLLADIDRIHKADAVVVVAGMEGALASVVGGLTDGPVVAVPTSVGYGSSLE
                     GVTALLGMLASCASGLTVVGIDNGFGAACALLRALGPVPGWPAGDIPATEDLE"
     gene            2333..3535
                     /gene="larC"
                     /locus_tag="QGG16_03735"
     CDS             2333..3535
                     /gene="larC"
                     /locus_tag="QGG16_03735"
                     /EC_number="4.99.1.12"
                     /inference="COORDINATES: protein motif:HMM:TIGR00299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel pincer cofactor biosynthesis protein
                     LarC"
                     /protein_id="HJP24418.1"
                     /translation="MAWFQPFAGIAGDMALGALIDAGADVDEVRALVRQLPIEGWALT
                     AEPTLRGGIAAIDVRVEADDDATHRHASSILAMVDAADFPDRMARRVRDTFEALAAVE
                     GRLHGIPPADVHFHEVGAIDSIVDVVGTCAALEVLDVDEVQSGSVATGTGTVESAHGT
                     IPIPAPATIALLAGAPTHGTDLAAELTTPTGAALLAAMVTTWGPMPALVVEATGYGAG
                     DRDLDGRPNVTQVVVGTLDRTGEATGGGPGRASGQPMVTLEVNVDDATGETLAHALAR
                     CLEAGARDAWVTPIVMKKGRPAHVVSALCDPSAVAVVAEVLTSETGSLGVRAHTVQRW
                     SAARTMDEVVVDGHPIEVKVTAGRAKAEHDDAARVAAVTGRPLREVLALAEAAWRAAD
                     SDPSEPAS"
     gene            3548..4285
                     /locus_tag="QGG16_03740"
     CDS             3548..4285
                     /locus_tag="QGG16_03740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HJP24419.1"
                     /translation="MTDTTHRDTPDRLYFRQLLSGRDFATEDPMARQMVNFVYLIGDL
                     ETGEAVVVDPAYDVDGILDVLAADDMRCTGALATHYHPDHVGGSMMGLDIIGAAELLE
                     RTSVPIHAQRDEAGFIAEVTGLGDGEIVGHDSGDVVTVGAIDIELIHTPGHTPGSQCF
                     LVDGRLVAGDTLFLEGCGRTDLPGGDPAALYHSLHHRLAKVPDDAVLYPGHLYSPQPS
                     APMGDTRRDNFVFMPRSEEQWLAMFGR"
     gene            4348..5358
                     /locus_tag="QGG16_03745"
     CDS             4348..5358
                     /locus_tag="QGG16_03745"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004024 - alcohol dehydrogenase activity,
                     zinc-dependent [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030554 - adenyl nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MDR family oxidoreductase"
                     /protein_id="HJP24420.1"
                     /translation="MTVFRALRLDKSDGEFRREYVELDDGDLPSVGDADQPEVIVDVE
                     YSTVNFKDALAIADQSPIVRSWPMVPGIDLAGTVASSDDPEVPVGQRVVVNGWGIGEE
                     SWGGLAQRARIRGSWTVPLPEGVSTAQAMAIGTAGYTSILCVLALEDHHVTPDRGPVL
                     VTGAAGGVGSVATALLAAQGYEVHASTGRPEEADYLTALGASTIVERSELSEPGGRPL
                     ARARWAGAVDAVGSHTLANVLAQVQPEGCVAACGLAQGMDLTTSVAPFILRGVTLRGV
                     HSVHVPRARRIEAWRRLDEDLDRDLLASMTKLVGLDDVSAVADDVLAGRIRGRVVVDV
                     HA"
     gene            5391..6446
                     /locus_tag="QGG16_03750"
     CDS             5391..6446
                     /locus_tag="QGG16_03750"
                     /inference="COORDINATES: protein motif:HMM:TIGR03559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HJP24421.1"
                     /translation="MRLGLGVDVWAAPRVDLPLRRILLAEKLGFDSVWTAEIYGADAV
                     TPLAFLAAHTRYLRLGSAVAQIPARPPTTAAMQFATLEALAPGRVVCGLGLSGPQVAE
                     GWYGQPWGQPSARLRDYVAIVRQVFRREGPVVHDGTEIRLPYDGPGSTGSGRPLKPIL
                     HPNPDLPIFLATGGPANVRLTAEVADGWLPLGYTPGSAHLYAEDLAVGLARSGRTMAD
                     LEVQTGATVCLTNDVRSVLDAAKPGVAMRVGGYGTAEHNFHRDAMVRRGFGEAAERIT
                     ELFVAGRRDEAAAAVPDDYVDDGALVGSEARIAERFEQWRSTDATGLTVRPGTDEEMV
                     LLSRLAGCEPRPDVDVP"
     gene            complement(6480..6566)
                     /locus_tag="QGG16_03755"
     tRNA            complement(6480..6566)
                     /locus_tag="QGG16_03755"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6530..6532),aa:Leu,seq:cag)
     gene            6725..7840
                     /locus_tag="QGG16_03760"
     CDS             6725..7840
                     /locus_tag="QGG16_03760"
                     /inference="COORDINATES: protein motif:HMM:NF025053.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family serine/threonine-protein
                     phosphatase"
                     /protein_id="HJP24422.1"
                     /translation="MIGSATHVGRIRDVNQDDVASGDDVYVVADGMGGHRGGEVASTV
                     ATSAVVEGFTGPDRASLVRAVRLANRAVLERAAADPELSGMGTTLCALAVVDGPGGQG
                     GPDALAVVNIGDSRVYRLDAGGLVRVSDDHSLVADLVRAGELTPDEAAVHPQRNILTR
                     ALGIEADPTIDSWELPPALGDRFLLCSDGLFNELDDARISELLGDGPAHEVAGRLVAE
                     AVVEGGHDNVTALVVEVVDGPEVPPSGRPPIPAARPERITGPVRSRPKGDDPRATLRA
                     AIGSVVAVVIATILVLSLFAGQGWFIGNDDGDVAVFRGRPSGILWFDPTFVEGGDLRI
                     SRLDDSTRAAVLETIPVGTLEEARRLIEGFRSHLSDQ"
     gene            7914..>9523
                     /gene="pknB"
                     /locus_tag="QGG16_03765"
     CDS             7914..>9523
                     /gene="pknB"
                     /locus_tag="QGG16_03765"
                     /inference="COORDINATES: protein motif:HMM:NF033483.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Stk1 family PASTA domain-containing Ser/Thr
                     kinase"
                     /protein_id="HJP24423.1"
                     /translation="MSAQGPTVFNGRYELHRQIARGGMADVYLARDLLLDRPVAVKVL
                     FDEFSRDPDFVERFRREAQAAANLNHPNVVSVFDWGEEQGTYFIVMEYVDGRSLAEIL
                     RSDGPLPADRAAEVAADIAAALAFAHRNGLVHRDVKPGNVLVTPNGHVKVADFGIATA
                     LVGARNDLTQSGSVMGTATYFSPEQAQGRPVDPRSDLYSLGVVLYEMILGRPPFTGET
                     PVAIAYRHVQDSPLSMRAAGAAVAESLEAITLKLLAKNPVNRYPTAEDLRSDLKRYRD
                     GAHDLRAISQVAMVSPVSPIAPIPAPSGDFGAATGHRRDDGLRRTAMFTVVLVGLLVA
                     FGYLVLEFVDTLGVGGDNEPAQVGIELVEVPTLIGQPLDEARTSLRDARLSVQMDYET
                     NSDFPENTVFAQDPSGGTKVEPADTVRLWISRGTGPMMLLDVRGDQAVDAERDLEAMG
                     LKVQTVGQEHPVVPAGEVIDQSPDPDVEIIPGARVILFVSPGPAVEEVPDLSNRPVLD
                     AMNIVSRLGWRASTAEEKSRTVPEGQVVR"
BASE COUNT         1539 a         3058 c         3296 g         1630 t
ORIGIN      
        1 tgagtgagtt gtggatcctg aagtgtcagc gtggaccacg attgttggtt caggtggtca
       61 gcggacgaga cgaggtcgaa ccagttgggg gtcctgacct gcgaaggcgt gtggcgcgct
      121 cggagggact cgaaccccca accttctgat ccgtagtcag atgctctatc caattgagct
      181 acgagcgcag cggcccgagt gtacgagcca cccggaaccc gccccaccgc tggtgaccag
      241 agccaccagg aggtggtgac ggccaatcgg tgggcggctg gcggagaggg tgggattcga
      301 acccacgatg agcttttagg cccatactcc cttagcaggg gagcgccttc gacctgactc
      361 ggccacctct cctcggggcc ggatgctacc ggcggcccgg atgccgcgga cccccgccga
      421 tacgctgcgc aacggaggga tggcagagcg gacgattgcg acggtcttga aaaccgttga
      481 gcctcacggc tccgggggtt cgaatccccc tccctccgcc actcgccggg actgatcagt
      541 cccctcagga gcggatgcga ccccgtaggt cggtcaacca gtcgtcagcc gagcgggagg
      601 ccacggtggc ctcggcccgg acctgcgctc cattggtgcc cgccgccggg tacgacccga
      661 ggaacttgac ctctccgtgc ttcatctgca gatttcggag gcagtcggcc accaactcgt
      721 ctgccacatg accttcaagg tccatcaaaa agcagtagtc accgagccct cgcttggtgg
      781 ggcgcgactc caggcgagtc aggttgatcg aacgggcggc gaactcctga agaatcccca
      841 gcagcgatcc cggtcggtcg gcccgctgga agacgaccaa cgaggtcttg tcatgaccgg
      901 tggaagccgg gatgccgtcg ggggctacta gtacgaaccg tgtctggttc tccggatggt
      961 cctcgatgtc ggcggccagc acctcaagcc cgtaggcctc ggcggcccga cctggggcaa
     1021 tggccgcggt gtggccgtcg ggtgtggcgg ccagcaggcg cgccgcatcg gccgtggagt
     1081 tggaggcctg gacttcagcg ttcgggaggt gttcggacag ccatccacgg cactgggcaa
     1141 tggcatgcgg gtacgaacac acccggtcga catcggccaa ggtggtgccg ggagccacca
     1201 tcaggttcaa ctggatggag atcacaacct cacgttggat cagcaggtcg acgtcgaagg
     1261 ccagagtgtc ctgggtgacg ttgacactgc cctcgatgga gttctcgatc gccgcgaaac
     1321 cgaggtccgc ctcgccggcc accacctggc ggaacacgtc aggaatcgac ggtgcaggac
     1381 gcaggtcaag gcccgtcagg tcgccctgag tgaacagagc ttgctcggtg aaggtgccgg
     1441 cggggccaag ataggcaagc ctcgaaaggt ccgggggtgc gagatcgtcc acgggagggg
     1501 aggatagtga cgtggatccc gacgcccggc accaattgcc tctgtacgac ttgcccttgt
     1561 ccgaattgat ggccggcgtg gcggagggga cgatctcgcc agatgacgct gtaagacgcc
     1621 tgagtcgact gccctttgtc gatgtaggcg tagcccggat cgaccaccac cgtgctctcc
     1681 ggcagggact ccccgaggcg gtgtacgccc ccggcaagtc cgccgaggac gtggccatcg
     1741 tggtcagcga actgctggac cacgggaccg gcccggtggt gctctcacgg gccgacaagg
     1801 tgcagaccgc cgccgcgcta ggcgtcgacg cgtcgggaac cgtgttgggc cacaccgtgg
     1861 tatggcgacg ggccgtcgat cgtggggacc gggtgctggt ggtcacggcc ggcacggccg
     1921 atgcgccggt agccgacgag tgcgcggcgg tcctgtgggc ccacggaatc gatgccgacc
     1981 ggttatccga cgtcggtgtt tcgggcatcc atcgtctgct ggccgacatt gaccgcattc
     2041 acaaggccga cgccgtagtc gtggtggccg gcatggaggg ggcgttggcc agcgtggttg
     2101 gtggcctcac cgatggcccg gtggtcgccg taccgaccag cgtggggtac ggctcgtcac
     2161 tggagggggt cacggcgctt ctgggaatgc tggcctcgtg cgcctctggg ctgaccgtgg
     2221 tgggcatcga caacggattc ggcgcagcgt gtgccctgct acgcgcatta ggaccggttc
     2281 ccggatggcc ggcgggcgac atccctgcga cggaagacct cgaatgaccc gggtggcgtg
     2341 gttccagccg tttgccggta tcgcggggga tatggccctc ggcgccctga tcgatgcggg
     2401 cgccgacgtc gacgaggtcc gggcgttagt gagacagctt ccgattgaag gttgggcgct
     2461 gaccgccgag ccgaccctgc gtggtgggat cgcggcgatc gacgtacggg tagaggccga
     2521 cgatgacgcc acccaccgac acgcgtcctc gattttggcc atggttgacg ctgccgactt
     2581 cccggatcgc atggcccgac gggtgcgcga caccttcgag gcgctggccg ccgtcgaggg
     2641 tcgccttcat gggattccgc cggccgacgt gcactttcac gaggtgggtg ccatcgacag
     2701 catcgtggac gtggtcggca cgtgtgccgc cctcgaggtg ctcgacgtcg acgaggtcca
     2761 gtcgggcagt gtggccacgg gaacgggaac ggtcgaatcg gcccacggca cgatccctat
     2821 tcccgcaccg gccaccatcg ccctgttggc tggagccccc acccacggca ccgacctggc
     2881 cgccgagttg accaccccga caggcgccgc cctattggcc gccatggtca ccacctgggg
     2941 tccgatgccg gcactggtcg tcgaggccac cggttacggg gcgggcgacc gggaccttga
     3001 cggacgaccc aacgtcactc aggttgtggt gggcaccctc gatcggacgg gggaagctac
     3061 cggcgggggt cccggccggg cctcgggtca gccgatggtc accctcgagg tgaacgtgga
     3121 cgatgccaca ggcgaaaccc tcgcccatgc cctggcccgc tgcctagagg cgggagcccg
     3181 tgatgcctgg gtcacgccca tcgtgatgaa gaagggccgc ccggcccacg tggtgagcgc
     3241 cttgtgtgat ccgtccgcag tagccgtggt cgccgaggtg ttgacgtctg agacgggatc
     3301 gctcggcgta cgggcccaca ccgtccaacg gtggtcggca gctcggacca tggacgaagt
     3361 agtggtcgac ggacatccga tcgaggtcaa ggtcaccgcc ggtcgggcca aggccgaaca
     3421 cgatgatgca gcccgcgtgg ccgcggtaac cggtcgtccg ctccgtgaag ttctggctct
     3481 agccgaggct gcctggcggg ccgccgactc agacccgtcc gaaccggcct cctagtctgg
     3541 ctcgacgatg accgacacca cccaccgcga cactcccgac cgcctctact tccgccaact
     3601 cctgtccggc cgggacttcg ccaccgagga tccgatggcc cgccagatgg tcaacttcgt
     3661 ctacctcatc ggtgatctgg agaccggcga ggccgtggtg gtcgacccgg cgtacgacgt
     3721 cgacggcatt cttgatgtcc ttgcggccga tgacatgcgt tgcaccggtg cgctagccac
     3781 ccactaccac ccggaccacg tgggtggttc catgatgggc ttagacatca tcggggccgc
     3841 cgaactactg gaacgaacct cggttccaat tcacgcccag cgtgacgagg ctggattcat
     3901 cgccgaggtg accggtctgg gcgacggtga gatcgtcgga cacgacagtg gtgacgtggt
     3961 caccgtggga gccatcgaca tcgagctgat ccacacgccg ggccacacgc cgggcagcca
     4021 gtgcttcttg gttgacggcc gactggtggc cggcgacacc ctgttcctcg agggctgcgg
     4081 gcggaccgac ctccccggcg gcgaccccgc ggcgctgtac cacagcctcc atcaccgtct
     4141 agccaaggtg cccgacgacg ccgtgctcta ccccggtcac ctctactcgc cgcaaccatc
     4201 ggcccctatg ggcgacaccc ggcgagacaa cttcgtattc atgccccgtt ccgaggagca
     4261 gtggctggcc atgttcggcc gctgaactgg cccgccctgc cgccgagaac ccggcccccg
     4321 aactcccagc ccccaagaag agaagagatg accgtgtttc gtgccctgcg actcgacaag
     4381 tccgatggtg agttccgacg ggagtatgta gaacttgacg acggggatct tccgtcagta
     4441 ggtgacgccg accagcccga ggtgatcgtc gacgtcgagt actcgacggt gaacttcaag
     4501 gacgcactgg ccatcgccga ccagtcgccc atcgtgcgtt cgtggcccat ggtgcccggc
     4561 atcgacctgg ccggcacggt ggcctcttcg gacgaccccg aggttccggt aggccagcgg
     4621 gtggttgtga acggttgggg gataggcgag gagtcctggg gtgggttggc tcagcgggcc
     4681 cggatccgcg ggtcgtggac cgtgccccta cccgaaggtg tatccaccgc ccaggccatg
     4741 gccatcggca ccgctggcta cacgtcgatc ctctgcgtgc tggccctcga ggaccaccac
     4801 gtgacacccg atcgtggtcc ggtactggtc accggtgcgg cgggtggcgt ggggagcgtg
     4861 gccactgccc tgttggctgc tcagggctac gaggtgcacg cctccaccgg ccgcccggag
     4921 gaggcggact acctgacggc tttgggcgcc tccaccatcg tggagcggtc tgaactgtcc
     4981 gaaccggggg gtcggccact ggcccgagcc cggtgggccg gggcggtgga cgcggtgggt
     5041 agccacacgc tggccaacgt gctggcccag gtgcagcctg agggctgtgt ggcggcctgc
     5101 ggccttgccc agggtatgga cctcacgacc agcgtggcac cgttcatcct gcggggggtg
     5161 accctgcgtg gcgtgcactc ggtccacgtg ccccgtgctc gacgcattga agcctggaga
     5221 cgtcttgacg aggatctcga tcgggatctg ctggcctcga tgaccaaact ggtgggtctc
     5281 gacgatgtgt cggccgttgc cgacgacgtg ttggccggac ggatccgggg ccgggttgtc
     5341 gtcgacgtcc acgcctgagt cgctgaccgg gaatcggaga acggggcatc atgcgactgg
     5401 gtttgggggt cgacgtctgg gccgcgccgc gtgtcgacct gccgctacgt cggatcctgt
     5461 tggctgagaa actcggcttc gactcggtgt ggaccgccga gatctacggc gccgatgcgg
     5521 tcaccccgct ggccttcctg gccgcccata cccggtacct ccgcctcggc tcagcggtcg
     5581 ctcagattcc ggcgaggcca cccaccactg cggctatgca gttcgccacc ctcgaggcac
     5641 tggcccccgg acgtgtggtg tgtggactgg gactgtcggg cccgcaggtc gctgagggct
     5701 ggtacggcca gccgtggggt cagccgtcag cacggttgcg ggactacgta gccatcgttc
     5761 gacaggtatt tcgccgcgag gggccggtgg tccacgacgg cacggaaatc cgtctgccct
     5821 acgacggccc gggctcgacc gggtcgggcc gacccttgaa accgatcctc catccgaacc
     5881 ccgatctgcc gatcttcctg gcaaccggtg ggccggccaa cgtgcgcctc accgctgagg
     5941 tggccgacgg ttggttgccg ctgggctaca ccccggggag cgcccacctc tacgccgagg
     6001 acctggctgt cggcctggct cgaagcggcc ggaccatggc cgacctcgag gtccagacag
     6061 gggccacggt gtgcctgacc aatgacgtgc ggtccgttct ggacgccgcc aagccaggag
     6121 tggccatgcg ggtcggtggt tacgggaccg ctgaacacaa cttccatcgc gatgccatgg
     6181 tccgacgggg attcggcgag gcggccgagc ggattaccga gctgttcgtg gccggtcggc
     6241 gggacgaagc cgcggcggcc gtgcccgacg actacgtgga tgacggggcc ttggtcggat
     6301 ccgaagcccg gattgccgaa cgcttcgaac agtggcggtc gaccgatgcc actggtctca
     6361 ccgtgcgacc cggtaccgat gaggagatgg tcctgctgtc tcgactggct ggctgcgaac
     6421 cacggcccga cgtcgacgtt ccctgactac cggcgctacc ggatttgggg tcgatcaggt
     6481 ggtgcgcgag gagggacttg aaccctcaca tcctttcgga cacaggaacc tgaatcctgc
     6541 gcgtctgcca attccgccac tcgcgcgagt cgcggaggaa aggctaacgg ggtcgatgat
     6601 gttcccgccg cgctgaaatg gcccgccagc caccggtacc atcgtgcgac ggtgcagccg
     6661 accgacgggt ggtgagggac aggtgatggt ggcccgccga cctcgaagac ggtcgatccg
     6721 attggtgatc ggttcggcca cccatgtcgg tcgaatccgt gacgtgaacc aggacgacgt
     6781 cgcttcgggc gacgacgtgt acgtggtggc cgacggaatg ggtggtcatc gaggaggcga
     6841 agtggcatca acggtggcca cctcagccgt ggtggagggg ttcacaggcc ccgaccgggc
     6901 ctcgctggtc cgtgcggtgc gtctggccaa tcgagcggtc ctcgagcggg ccgctgccga
     6961 tcccgaactg tcgggtatgg gaaccaccct gtgtgcgctg gccgtggttg acggtccagg
     7021 aggacaggga gggcccgatg cactggctgt ggtcaacatt ggtgacagcc gcgtgtaccg
     7081 ccttgatgcc ggtgggctag tacgggtcag cgacgaccac agcctggtgg ctgacttggt
     7141 gcgggccggt gagctgacac cggacgaggc ggccgtccac ccacaacgca acattctcac
     7201 cagggctctg gggatcgaag ccgatcccac catcgacagt tgggaactcc cgccggccct
     7261 gggagaccgc ttcctgttgt gcagtgacgg gttgttcaac gagttggatg atgcccggat
     7321 cagcgaactt ctgggcgacg gcccggccca cgaggtagcc ggtcgactgg tggccgaagc
     7381 ggtcgtcgag ggcgggcacg acaacgtcac tgcgctggtc gtagaggtgg tcgacggccc
     7441 ggaggtcccg cccagcgggc gtccgccgat ccctgccgcc cggcccgagc ggatcaccgg
     7501 tcctgtccga tcccgcccga aaggcgatga cccgcgggcc accctgcgag ccgctatcgg
     7561 ctcggtggtt gccgtggtga tcgcaacgat cctggtcctg tcgttgtttg ctggccaggg
     7621 gtggttcatt gggaacgacg atggggacgt ggcggtgttc cgggggcgtc catctgggat
     7681 cctgtggttt gatccaacct tcgtggaggg cggagatcta cggatatctc gcctcgatga
     7741 ctcgacccgg gcggccgtgc tggagacgat cccggtcgga actctggagg aggccaggcg
     7801 tctcatcgag ggcttccgat cccatctgag cgaccaatga ccaattacaa gcgactaatg
     7861 accaatcacg ggcgacggtc ggcccaaacc ggcccccggt agaatcctcc gccgtgtcag
     7921 cacagggccc caccgtcttc aatgggcggt acgaactcca ccggcagatc gcccggggag
     7981 gcatggccga cgtctacctc gcgcgcgatc tcctcttgga tcgaccagtg gcggtcaagg
     8041 tcctgtttga cgaattttcc cgagatcccg acttcgtgga gcggtttcgt cgggaggctc
     8101 aggccgcagc caatctgaac catcccaacg tggtgagcgt cttcgactgg ggcgaagagc
     8161 agggcaccta cttcatcgtc atggagtacg tggacggccg gagtctggcg gagatcctcc
     8221 gctccgacgg gcccctgcct gccgatcggg ccgccgaggt tgccgccgac attgctgccg
     8281 cgctggcctt tgcgcaccgc aacggtctgg tccaccggga cgtgaagccc ggaaacgtat
     8341 tggtcacccc caacggccac gtgaaggtgg ccgacttcgg aatagcgacg gcgttggtag
     8401 gggcccgcaa cgacctcacc cagtcgggat cggtcatggg aacggccacc tacttctcgc
     8461 ccgagcaggc gcagggacga ccagtcgacc cgcgtagcga cctgtactcc ctcggcgtcg
     8521 tgctctacga gatgattctt gggcgaccgc cgttcaccgg cgagaccccg gtggccattg
     8581 cctaccggca tgtccaggac agcccgttgt cgatgcgagc cgctggtgcc gccgtggccg
     8641 aatcgttgga ggccatcacc ctcaagctgc tggccaagaa cccggtcaac cgctatccca
     8701 ctgccgagga ccttcggagt gacctcaagc gttaccggga cggcgcacac gacctgcgag
     8761 ccatctcgca ggtcgccatg gtgtcaccgg ttagtccaat cgccccgatc ccagcgccgt
     8821 ccggggactt tggggcggcc accggccacc gtcgcgatga tgggctgcgc cgtacggcca
     8881 tgttcaccgt ggtgttggtt ggcctgctgg tggccttcgg ctacttggtg ttggagttcg
     8941 tcgacacgct cggggtgggt ggcgacaatg agccggccca ggtggggatc gaactggtcg
     9001 aagtacccac gttgatcggt cagccgttgg atgaggcccg gaccagtctg cgcgatgctc
     9061 gcctcagcgt tcagatggat tacgagacca actccgactt tcctgaaaac accgtctttg
     9121 cccaggatcc gtcgggcggc accaaggtcg agcccgccga cacggtccgc ctgtggatca
     9181 gtcgggggac cggaccgatg atgctgctgg acgtccgggg cgatcaggct gtggatgccg
     9241 aacgcgacct ggaggctatg ggtctcaagg ttcagacggt gggccaggaa catccggtgg
     9301 ttccagccgg cgaggtgatc gaccagtcac ctgatccgga cgtagagatc attccgggcg
     9361 cgcgggtcat tctgttcgtg tcgcctgggc cggccgtcga ggaggtgccc gacctttcga
     9421 accggcctgt gctcgatgcg atgaacatcg tgtcgcgtct tggttggcgg gccagcacgg
     9481 ctgaggagaa gagtcgcacg gtgcccgagg gccaggtggt ccg
//
LOCUS       DASCMR010000148        12641 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000735177, whole genome shotgun sequence.
ACCESSION   DASCMR010000148 DASCMR010000000
VERSION     DASCMR010000148.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 12641)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12641)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12641
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000735177"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..718
                     /locus_tag="QGG16_03770"
     CDS             <1..718
                     /locus_tag="QGG16_03770"
                     /inference="COORDINATES: protein motif:HMM:NF013989.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydrofolate reductase family protein"
                     /protein_id="HJP24424.1"
                     /translation="GLHLDDDRPVPPGRPWVMVNMVASVDGATAVAGRSEGLGGPADR
                     QVFQTIRGCADMILVGAGTVRAEGYRPPRSLKETVPESRAASDRSRRPRLVVVSASLD
                     LDPTAPLFADRDPTDPPPIVATVASAPADRRAGLEPVAEVMACGETLVDLTGLLAVLD
                     DIGARTVLCEGGPDLNHQLFAAGLVDELCISFSPKLVGGIGREGRSLLDGPPLAAATR
                     LVLDRVLTEDGFLFCRYLVS"
     gene            complement(728..1261)
                     /locus_tag="QGG16_03775"
     CDS             complement(728..1261)
                     /locus_tag="QGG16_03775"
                     /inference="COORDINATES: protein motif:HMM:NF013630.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysM domain-containing protein"
                     /protein_id="HJP24425.1"
                     /translation="MNTATASQPPLDFPRFPDVESPTLLRVVPPVEPAPAERLATVHR
                     LVTDVFAAEPAVVNAVRRQTTAEGLVPAASAVSPRVYRQRRFLAAVVLGLLVSALSLL
                     GGELIGRVTGTTGAPAVAAVGEPIVHVVQPGDTLWSIAVSINPNGRDLRATVDRLVDA
                     AGGSILQPGQRIALPVG"
     gene            1479..2111
                     /gene="lexA"
                     /locus_tag="QGG16_03780"
     CDS             1479..2111
                     /gene="lexA"
                     /locus_tag="QGG16_03780"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006282 - regulation of DNA repair
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HJP24426.1"
                     /translation="MSATGLTPRQQEILEFIDIQISDRGYPPSVREIGDAVGLTSPST
                     VHSHLATLQDRGFIRRDPSKPRAIEVRLDPASGAAVDRGSVRHVPLLGDVAAGTGVIA
                     AENVEESLPLPAEFTGDGELFMLRVRGDSMIGAGILDGDHVVARVQQNADAGDLVVAG
                     IDGEEATVKHFQRDGSAIVLVPSNPSYEEIRRSADEVTIYGRVVTVLRRI"
     gene            complement(2139..3200)
                     /gene="dapE"
                     /locus_tag="QGG16_03785"
     CDS             complement(2139..3200)
                     /gene="dapE"
                     /locus_tag="QGG16_03785"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020376944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009014 - succinyl-diaminopimelate
                     desuccinylase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HJP24427.1"
                     /translation="MTDLLALTAGLVDIPSVSFDEADLVAYLEAELRAVPGLAVDRIG
                     DNLVARTTLGRGHRLVLGGHTDTVPGETSGSRLDGDTLWGLGAADMKSGLAVMLELAR
                     TVAEPAVDVTWVFYAREEVAIAHNGLRELFAEAPDLLVGDVAILGEPTGGAVEAGCQG
                     TMRFEVTLAGVRAHTARPWMGRNAVHRLGALLTALGSYEHREPVIDGCRYREALQAVH
                     VEGGVAGNVVPDRSMVRINHRYAPDRTGDEAEAHVRSVLAPYLDDGDQVALVDHSPAA
                     LPGMSHPLLQRLATEGGLEVRAKLGWTDVAFFSEHGVPAVNLGPGEPTLAHTADERVE
                     RSALESCYQVLRDLLLNGA"
     gene            complement(3233..4075)
                     /locus_tag="QGG16_03790"
     CDS             complement(3233..4075)
                     /locus_tag="QGG16_03790"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: protein motif:HMM:NF008808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HJP24428.1"
                     /translation="MLTDSSHDALKARIEELWAGRDGLSHDDTEAVATIHAAIDLLDT
                     GAARVAESDTEGGVVVNEWLKLAILLLFRVSEMETIEMGPFEFADKIPLKTDWIARQV
                     RVVPGAQARWGSYQGPGVVMMPSYTNIGAYVGDNTMVDTWATVGSCAQIGRNVHLSGG
                     VGIGGVLEPANAVPVVIGDDCLIGSRCIVAEGARVGDGVVLGAGAVLTASIPVIDAAS
                     GEELGRGMVPDWCVAVQATRPRTFDGGEFGLPCVLVLKYLDPGERHDKSVLNDVLRTH
                     GVTT"
     gene            complement(4139..5266)
                     /locus_tag="QGG16_03795"
     CDS             complement(4139..5266)
                     /locus_tag="QGG16_03795"
                     /inference="COORDINATES: protein motif:HMM:NF012382.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HJP24429.1"
                     /translation="MTSVPEPTGFVPPPYPFDVPADVVRTASAIDGGAVDLSRGVPCD
                     PVPDVVAAALAEPDSARPYPPSVGTPELLDAVAGWCDRQLGVPLDPLSIGACVGTKEM
                     VTGLPHLLRLRNPERDTVLYPAVSYPSYEMGAILAGCRAVPVPMTADWRIDLSAIDEN
                     DASRALCLWVNTPGNPAGALDDLGAAAEWGRGRGVPVVSDECYVEFTWHEPSRSVLQH
                     GLDGVLAVHSLSKRSNLAGLRVGFYAGDPDLVWYLRETRRHQGFLIPGPAQAAGAASL
                     RDQDHVQVQAGRYRRRLESLIEVLAALGLSASMPEGGFYLWITAPDGDELALTRSLAR
                     ELGILTSPGTTFGPDGAGHVRIAAVVPDEQLALVRARAGLT"
     gene            complement(5271..6683)
                     /gene="hflX"
                     /locus_tag="QGG16_03800"
     CDS             complement(5271..6683)
                     /gene="hflX"
                     /locus_tag="QGG16_03800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HJP24430.1"
                     /translation="MGPLEPHDIPGDGDDDSHRGAFGEFGGEATGLIDRTFRERIVLA
                     GVTLGRADPEATDASMDELARLVDTAGADPVARVLQHRDTPDRATYIGKGKVEELRAV
                     SESLDADTVIFDNELSPAQQGNLEETLKRTALDRTAVILDIFAQNASSPEGRAQVELA
                     QLRYRLPRLRRSGKTFSQQGGGIGTRGPGETQLEVDRRRLMRRVTRLESDLKQIRRNR
                     STQSKARRRTSNQAVAIVGYTNAGKSTLLNRLTDAGVLVEDRLFATLDATTRRLQLPG
                     GEAVFVSDTVGFVRKLPHQLVEAFKSTLDVVIDADLLVHVVDSSDPDPEGSIAAVRVV
                     LDEIGAGEVPELYVFNKADVEPLAARRLVDREPGSVAISSTTGEGIDEMLAVVARRLR
                     RQTIVAELHVPYQRGDVLALAHREGEVMETKESEDGWHILVRVDEGSAGRLTEFRVDD
                     LPPESPASGSGNQNGTDVTG"
     gene            complement(6745..7578)
                     /gene="dapF"
                     /locus_tag="QGG16_03805"
     CDS             complement(6745..7578)
                     /gene="dapF"
                     /locus_tag="QGG16_03805"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008837 - diaminopimelate epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HJP24431.1"
                     /translation="MRLTHHHGLGNDFLIGFVDEVPADGAEMARRLCDRATGIAATPA
                     ASSRGADGLVLGTTGVDGRPVFTLFNSDGSRAEVSGNGLRCFGQALARRDGVADLEVV
                     VDTAAGSRHVAVRGDPTAIEVLATVEMGVAGPGPTCDGLDLGLVGVEVLHADSANLGN
                     PHLVLMVDDPEAVDLGVVGPAIEAHFSPVGCNVHLVVVETRSVIRLRPWERGAGLTEA
                     CGSGACAAAHVAHGRGLVDDVVEVQMPGGSATVAVGDPIRLTGPAIWTADLDDGNAHR
                     G"
     gene            complement(7628..8554)
                     /gene="miaA"
                     /locus_tag="QGG16_03810"
     CDS             complement(7628..8554)
                     /gene="miaA"
                     /locus_tag="QGG16_03810"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HJP24432.1"
                     /translation="MQPNGHLAIIGATASGKSSLALEVARHRPGTELVSMDSMALYRG
                     MDIGTASPTAAERAEVPIHLLDLVDPNEDYSVSMFQEAAQTAIGDITARNCRALMVGG
                     TGLHVRAVVDDLEIPGEWADVRSDLDAQSDTTALHARLVELDPLAARRMEPTNRRRVI
                     RALEVSIGSGRPFSSFGPGLDAYPPTPFTQVGLRVDRDLLDRRIADRYRRQMDEGFLD
                     EVRRLADLPGGPSRSAAQALGYRELLSHLRGECTLDEAVDEAMAATRQFARRQDRWFR
                     RDPRIEWFDVGDEPMVVLDQVLDRFDAAQVGV"
     gene            complement(8558..10045)
                     /locus_tag="QGG16_03815"
     CDS             complement(8558..10045)
                     /locus_tag="QGG16_03815"
                     /EC_number="2.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020376950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008172 - S-methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MiaB/RimO family radical SAM
                     methylthiotransferase"
                     /protein_id="HJP24433.1"
                     /translation="MTSPNEQTVVRSYAVRTYGCQMNEHDSERIAGLLEADGMVPAES
                     EAEADVIVLNTCCIRENADNKLYGALGNLKALKTERPDVQVAVGGCLAQKDRDLIQQR
                     AGHVDVVFGTHNVHRAVELLAEARGHGPVIEILEETARDDADSFPSALPAQRDADHKA
                     WVTIQIGCDNSCAFCIVPAVRGPEISRPFGQMVDEVAALAADGVSEITLLGQNVNSYG
                     RDLTLRLRGIDAGPADAYEAGAVWTADPTRRARPLFADLLVASGAVEGIRRVRFTSPH
                     PKDLRPETISAMADTPEVCEHLHLPLQSGSDRILSAMHRGYTAERYLERLEAARMGID
                     DLAVTTDLIVGFPGETGDDFERTLEVVAEAGYDSAYCFVFSPREGTEAATMVEDFVDH
                     EVCVDRFERLQRVLKRSATITHRARIGRTEEVVIEGPAKREPDQVTGRTRQNKLVHLA
                     AGDGLRTGAYATVRITDAATHYLLGELVEVTAPPRHRRRIPVASA"
     gene            complement(10145..11278)
                     /gene="recA"
                     /locus_tag="QGG16_03820"
     CDS             complement(10145..11278)
                     /gene="recA"
                     /locus_tag="QGG16_03820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008094 - ATP-dependent activity, acting
                     on DNA [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HJP24434.1"
                     /translation="MAKHGRTMSGGALEAGSERTKALDMALGQIEKQFGTGAVMKMGD
                     KGSMSIETVPTGALALDLALGIGGIPRGRVVEIYGPEGSGKTTLATHVVAEAQRNGGI
                     CAYIDAEHAMDPTYARAIGVDVDELLISQPDTGEQALEIADMLVRSGALDVVVVDSVA
                     ALTPRAEIEGEMGDSHVGLQARLMSQALRKLTSNLNKSQTILIFINQLREKIGVMFGS
                     PETTPGGRALKFYSSVRLDIRRIEAIKDGVEVVGNRTRVKVVKNKCAPPFRQAEFDIM
                     YGKGISREGSVVDLAVDLGIVKKSGAWYTYEGEQLGQGRENAKKFLLDNPEVMVEITD
                     RVWREVQPAESEELEAVEVGADAVALGGEEFSEVDDLPISLDT"
     gene            11498..11941
                     /gene="msrB"
                     /locus_tag="QGG16_03825"
     CDS             11498..11941
                     /gene="msrB"
                     /locus_tag="QGG16_03825"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HJP24435.1"
                     /translation="METRTGDPNPEQKRAAHAAANPDLAERLDPMAWHCTQEAGTERA
                     FTGTYWDEKRAGTYRCAACDAAVFDSDAKFDSGCGWPSFTAPVPSGPDGAVVDARTDS
                     SRGMVRTETTCSSCGAHLGHVFPDGPGPTGDRYCINSACITLEER"
     gene            complement(11955..12473)
                     /gene="thpR"
                     /locus_tag="QGG16_03830"
     CDS             complement(11955..12473)
                     /gene="thpR"
                     /locus_tag="QGG16_03830"
                     /inference="COORDINATES: protein motif:HMM:TIGR02258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008664 - 2'-5'-RNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HJP24436.1"
                     /translation="MRLFVAVRPSTEAADVLDQLPRPEAPRLRWLPRAQWHVTLRFLG
                     DADPGEVAAVLAAAPWGEIAPVDVRLGPATALLGDGVVMVPAEGCDDLAALMVAATEH
                     LDQPVEIAPRGYRPFVGHLTLGRFRDELPSGSVGSPVTVSFRVDEVLLMASRTLPEGA
                     VYQVIAAFPLGG"
BASE COUNT         2205 a         4268 c         4097 g         2071 t
ORIGIN      
        1 cgggctgcac ctcgacgatg atcgaccggt tccgccgggc cgcccctggg taatggtcaa
       61 catggtggcc tccgtcgacg gagccaccgc tgtggctgga cgatcagagg gactcggggg
      121 gccggccgac cggcaggtct tccagaccat ccggggatgc gccgacatga tcttggtggg
      181 tgcggggact gtccgggccg agggctaccg gccaccccgg tccctgaagg agacggtgcc
      241 ggaaagccgg gctgcatcgg accgctcacg gagaccccgt ctggtggtcg tgtcggccag
      301 cctggacctg gatccgacgg cgccactgtt cgctgaccga gacccgacgg atccaccacc
      361 catcgtggcc accgtcgcct cggcacccgc cgatcgacgg gccgggctgg aaccagtggc
      421 cgaagtcatg gcctgtggcg agaccctggt cgacctcacc ggcctgctcg ccgtgctgga
      481 cgacatcggg gcccgcactg tcctgtgtga aggcggaccg gatctcaacc accaactctt
      541 cgctgccggt ctggtcgacg aactctgcat cagtttctcg ccgaagctcg tcggcggtat
      601 cggcagggag ggccgcagcc tgttggacgg tccgccgctc gccgcggcca cccgcttggt
      661 actggatcgc gtcctgaccg aggacggttt cctcttctgc cgttacctcg tctcctagcg
      721 actggcgcta gccgacgggt aaggcgattc gctggcccgg ttggaggatc gatccgcccg
      781 ccgcatcgac caatcggtcg actgtggccc gtaggtcccg accgttcggg ttgatcgaca
      841 cggcgattga ccaaagggtg tcacccggct ggaccacgtg gacgatcggc tcgcccaccg
      901 cggcgaccgc cggtgccccc gttgtgcccg tgacccgacc aatgagttcg ccacccaaca
      961 gggagagcgc cgagacgagc aacccgagga ccaccgcggc caagaaccgg cgctgccggt
     1021 agaccctcgg ggagaccgcc gatgcggcag gaaccagccc ctcggcggtg gtctgtcgcc
     1081 gaacggcatt caccacggcg ggctcggcag cgaagacgtc ggtgaccagt cggtgcacgg
     1141 tggccagtcg ctcggcgggt gccggttcga ccggcgggac cacccgcagg agggtcggag
     1201 actcgacgtc cgggaaccgg gggaagtcga gcggaggttg ggaggcggtg gcggtattca
     1261 tgaggaccat cctttcgatc gagtgtgaca acccccaggg agggggtact tgacacggaa
     1321 cgtccgttcg acgaacatgg tttcgacgta cacgtgttcg atcatgagat gcagtatatc
     1381 gaacacctgt tcgatatcaa gagatggcga cggagtacat agccggtacg acgagaccgc
     1441 acgacgaaac ccaccgtgca gagagaagga accccgacat gagcgccacg ggacttaccc
     1501 cacgccagca ggagatcctc gagttcatcg acatccagat cagtgaccgt ggctatccgc
     1561 cgtccgtccg cgagatcggc gatgcggtcg gtctcacctc cccgtcgacg gtgcactccc
     1621 acctggcgac ccttcaggac cggggcttca tccgacgcga cccgagcaag ccccgggcca
     1681 tcgaggttcg cctcgatccg gcgagcggtg cggcggtcga tcggggctcc gtgcgccacg
     1741 tacccctgct tggcgacgtg gcggccggta ccggtgtcat cgccgccgag aacgtcgagg
     1801 agtccctccc tctgccggcc gagttcaccg gcgacggcga gctcttcatg ctccgggtgc
     1861 gaggcgactc gatgatcgga gccggcattt tggatggcga ccacgtggtg gcccgggtcc
     1921 agcagaacgc cgatgccggc gacctggtgg ttgccgggat cgacggcgag gaggccaccg
     1981 tcaagcactt ccagcgtgat ggttcggcca tcgttctggt tccctccaat ccgagctacg
     2041 aggagatccg tcggtcggcc gacgaagtca ccatctacgg ccgggtggtc accgttctcc
     2101 gacggatctg acccggcaac gcgccgccca ggtccggttc aggctccgtt caggagcagg
     2161 tctcggagca cctggtagca ggactccaac gccgatcgct ccacccgctc gtccgccgtg
     2221 tgggccaacg tcggctcacc cggccccagg ttcaccgcgg gcacgccgtg ctcggagaag
     2281 aacgccacgt cggtccaccc caacttggcc ctgacctcca gaccaccttc ggtggccaga
     2341 cgctgcaata gcgggtgaga cattcccggg agggcggctg gcgagtggtc gactagcgcc
     2401 acctggtcac cgtcgtccag gtacggggcc aggacagagc gaacatgggc ctcggcctcg
     2461 tcacccgtcc ggtccggtgc ataacggtgg ttgatccgga ccatggaccg gtcaggtaca
     2521 acgtttccgg ccacgccacc ttccacgtgg acggcctgga gggcttcgcg gtagcgacaa
     2581 ccgtcgatta ccggctcccg gtgctcatag gagccgagtg cggtcaacaa cgcacccaga
     2641 cggtggacgg cgttgcgacc catccacggg cgagctgtgt gggcgcggac gcccgccagg
     2701 gtgacctcga aacgcatcgt tccctgacaa cccgcctcga cggctccacc ggtgggctct
     2761 cccagaatgg ccacgtcgcc gaccagcagg tcgggggcct cagcgaacaa ttcccgcagg
     2821 ccgttgtggg caatggccac ttcttcgcgt gcgtaaaaca cccaggtgac gtcgaccgcc
     2881 ggttcggcca ccgtgcgggc cagttccagc atcacggcga ggccgctctt catgtcagcg
     2941 gcacccagtc cccagagggt gtctccgtcg agtctggagc cagaggtttc accgggaacg
     3001 gtatcggtgt gtccaccgag caccagacga tgaccccgac cgagggtggt gcgggccacc
     3061 aggttgtcgc cgatccgatc cacggccaga ccgggaacag ctcgcaactc ggcttcgagg
     3121 tacgcgacga ggtcagcctc gtcgaaactg accgacggga tatcgaccag tcccgcggtc
     3181 agggctagga gatcggtcac gggatagtcc ttcggtccgg aggcgacccg gctcaggtgg
     3241 tcacgccgtg ggtgcgcagg acatcgttca gtaccgactt gtcgtgccgc tcccccgggt
     3301 cgagatactt gagaaccagc acgcacggca ggccgaactc gccgccgtca aacgtccttg
     3361 gtcgggtggc ctggacggcc acgcaccaat cggggaccat gccacggccc agttcttcgc
     3421 cactggcagc gtcgatcacc gggatcgacg cggtcagcac ggcaccggcg cccagcacca
     3481 cgccatcacc tactcgggca ccttcggcaa caatgcagcg gctcccgatg aggcagtcgt
     3541 cgccgatcac caccggcacg gcgtttgccg gttcgagtac gcccccgatg ccgaccccgc
     3601 cagaaaggtg gacattgcgg ccgatctggg cacatgaacc cacggtggcc cacgtgtcca
     3661 ccattgtgtt gtcccccacg tacgcaccga tgttcgtgta gctcggcatc atcaccacgc
     3721 cggggccctg gtagctaccc cagcgggcct gggcgccggg cacgacgcga acctggcggg
     3781 ctatccagtc ggtcttgagc gggatcttgt cagcgaactc gaacggcccc atctcaatgg
     3841 tctccatctc ggacacccga aagagcagca ggatggccag tttcaaccac tcgttgacga
     3901 ccacgccgcc ctccgtgtcg gactcggcca cccgggccgc tccggtgtcg agcaggtcga
     3961 tagcggcgtg gatggtggcg acggcttcgg tgtcgtcatg cgacaggccg tcacggcctg
     4021 cccacaactc ctcaatccgt gccttcaggg catcatgtga agaatcggtc agcatcgggc
     4081 gaggctaccg gtcggtttcc gtcgggccgg aaccggttcc gtcggattca ggtcaggttt
     4141 acgtcaggcc agcccgggca cgaactagag ccaactgctc gtcgggcact acggcggcga
     4201 tccgaacgtg accggctccg tcgggaccga acgtcgtgcc ggggctggtc aagatcccca
     4261 gctcacgagc tagggatcgg gtgagggcca gctcgtctcc gtcgggggcg gtgatccata
     4321 ggtaaaagcc cccctcgggc atcgaagccg acagaccgag ggcagccaac acctcgatga
     4381 gcgattccag gcgccgccga tagcggccgg cctgcacctg tacgtggtcc tgatcccgca
     4441 gcgacgcagc tcccgcggcc tgagccggcc ccggaatcag aaagccctga tgtcgtcggg
     4501 tctcgcgtag gtaccagacg aggtccggat cgccggcgta gaagccgacc cgcaatccag
     4561 cgagattgga acgcttggac aacgaatgga cggctagcac cccgtccagg ccgtgctgta
     4621 gcaccgagcg ggacggctcg tgccacgtga actccacgta gcactcgtcg gacaccaccg
     4681 gaacgcctct gccccgaccc cactcggcgg ccgccccaag gtcgtcgagc gcaccggccg
     4741 ggttgccggg cgtgttcacc cataggcata acgcacgcga ggcgtcgttc tcgtcgatgg
     4801 ccgacagatc gatccgccag tcggcggtca tagggaccgg tacagcccgg caaccagcca
     4861 aaatggcccc catctcgtag gaggggtagg acaccgccgg gtagaggacg gtatcccgtt
     4921 cagggttccg cagccgcagc aggtggggca ggccggtgac catctccttg gtgccgacac
     4981 aggctccgat ggacaacggg tcgagcggta caccgagttg tcgatcacac caaccggcga
     5041 cagcgtcgag aagttctggc gtacccaccg acggcgggta gggccgtgcc gaatccggct
     5101 cagcgagtgc cgcagccacc acgtcgggta ccggatcgca gggaacgccg cgggacaggt
     5161 cgactgctcc cccgtcgatc gccgaggctg tccggaccac gtcggctgga acgtcaaatg
     5221 gatagggcgg aggaacgaag ccggtgggtt cgggaacgga ggtcacatgc tcaccctgtc
     5281 acgtcggttc cattttggtt acctgatccg gaggccggtg attcaggggg tagatcatcg
     5341 acccgaaact cggtgagacg accggccgag ccctcgtcga cccgtaccag aatgtgccac
     5401 ccgtcctccg attccttggt ctccataacc tcgccctccc ggtgggcgag ggccagcacg
     5461 tcacctcgct gatagggaac gtgcagttca gccacgatcg tctgacgtcg gagccgtcgg
     5521 gccactacgg ccagcatctc gtcgatcccc tcaccggtgg tcgacgagat agccaccgac
     5581 cccggttccc ggtcgacgag tcgtcgggcg gccaagggtt ccacatcggc cttgttgaac
     5641 acgtagagct caggcacctc accggccccg atctcgtcga gcacgacacg caccgcggca
     5701 atgctgccct ccgggtcagg atccgacgaa tcgaccacat ggaccagcag atcggcgtcg
     5761 attaccacgt cgagcgttga cttgaaggct tcgaccagtt gatggggcag cttgcggacg
     5821 aaacccaccg tgtcgctcac gaagaccgcc tcaccacccg gtagttgcag gcggcgggtc
     5881 gtggcgtcca gcgtggcgaa gaggcggtcc tcgactagca cgcctgcgtc ggtcaaccgg
     5941 ttcaggagag tcgactttcc ggcgttggtg taaccgacaa tagccacggc ctggttgctg
     6001 gtgcggcgac gggctttgga ctgggtggat cggttccgtc ggatctgctt caggtcggat
     6061 tccaatcggg tgacccgtcg catgagacga cggcgatcta cctccaactg ggtctcgccg
     6121 gggccacggg tgccgatgcc gccaccctgc tgactgaacg tcttcccgga ccggcggagc
     6181 cgaggcaggc gatatcggag ttgggccaac tcaacctggg ctcggccctc ggggctgctg
     6241 gcgttttggg caaagatgtc gaggatgacc gccgtgcggt ccagcgctgt ccgcttaagg
     6301 gtctcttcaa ggtttccctg ctgggccggg gagagctcat tatcgaatat cacggtgtcg
     6361 gcatccagcg actcggagac cgctcgtagc tcctcgacct tgcctttgcc gatgtaggtc
     6421 gcccggtccg gggtgtcgcg gtgctgaagt acccgggcca cggggtcggc ccccgcggtg
     6481 tcgaccaggc gggccagttc atccatggac gcgtcggtgg cttcaggatc ggctcgaccg
     6541 agggtgacgc cggccagcac gatgcgctcc cggaacgtcc ggtcgatgag gccggtggcc
     6601 tcgccgccga actcgccgaa ggcaccacgg tgcgagtcgt cgtccccgtc acctggaata
     6661 tcgtggggct ccagcgggcc cattggttct gatggttcca gcggcgccaa gggctccgtc
     6721 gactcgagcg ggtccggcga ctggtcaccc acgatgggcg ttcccgtcgt cgagatctgc
     6781 ggtccagatc gccggcccgg tcaagcggat gggatcgccg acggccacgg tggccgaacc
     6841 accgggcatc tggacctcaa ccacatcgtc cacgagaccc cgaccgtggg ccacgtgggc
     6901 cgctgcgcag gcacccgacc cacaagcctc ggtgagcccg gcgccccgct cccacggtcg
     6961 taaccggata accgagcggg tctcgacgac aaccaggtgg acattgcagc ccaccggcga
     7021 gaaatgggct tcaatggccg gccccacaac ccccagatcc accgcctcgg ggtcatcgac
     7081 catgagtacg agatgggggt tcccgaggtt cgcactatcg gcgtggagca cctctacgcc
     7141 cactaggcct aggtctagac cgtcgcaggt cgggccgggc ccggcgacgc ccatctctac
     7201 ggtggccagc acctcgatag ccgtcgggtc gccgcggacg gcaacatgac gagaacccgc
     7261 cgccgtgtcg accaccacct cgaggtcagc gacgccatca cgacgagcca gagcctgccc
     7321 gaagcagcgt aggccgttgc cacttacctc ggccctgctc ccatcgctgt tgaacagcgt
     7381 gaacacgggg cggccgtcga caccggtggt gccgagaacg agcccgtcgg cgcctctcga
     7441 ggatgctgca ggggtggcgg cgatgccagt cgcccggtca cagagacggc gcgccatctc
     7501 ggccccgtcg gcgggaacct cgtcgacgaa tccgatcagg aaatcgtttc ccagaccgtg
     7561 gtggtgagtt aggcgcacga cgacattctt ccccaccccg gcgtcagact ctcgccagat
     7621 tcgcccacta cacgccaacc tgcgcagcgt cgaaacggtc gaggacctga tcgaggacca
     7681 ccattggctc gtcgcccacg tcgaaccact cgattctcgg gtcccgtcgg aaccaccggt
     7741 cctgtcggcg ggcgaactgc cgggtggccg ccatcgcctc atcaaccgcc tcatccaagg
     7801 tgcattcgcc tcgcaggtga gacagcaact cccgatagcc caatgcctga gcggccgatc
     7861 tcgacggccc gccgggaagg tcggctagac ggcgaacctc gtcgaggaac ccttcatcca
     7921 tttggcggcg gtaacggtca gcgatccgtc ggtccaacag atcacgatcg acccggaggc
     7981 ccacctgggt gaagggggtg ggcgggtagg catccagtcc cggtccaaac gacgagaacg
     8041 gccgacccga tccgatcgag acctcgagcg cccgaatcac ccggcgacgg tttgtaggct
     8101 ccattcgtcg tgcggccaag ggatccagct cgacgagacg agcgtgcaat gcggtggtgt
     8161 cggactgagc atcgaggtct gagcgcacat cggcccactc acctgggatc tccaagtcgt
     8221 cgacgacggc tcggacgtgg agcccggtcc ccccgaccat caacgcccga cagttccgag
     8281 cggtgatgtc accaatggcc gtttgggccg cctcttggaa catggagacc gaatagtctt
     8341 cgttgggatc gaccagatcc agcaggtgaa tgggaacctc ggcccgctct gcggccgtcg
     8401 gagacgccgt accgatatcc ataccccggt atagggccat ggagtccatg gagaccaact
     8461 cggtgcccgg gcgatgccgg gccacctcga gggccagaga cgacttgcct gaggccgtgg
     8521 ccccaatgat cgcgagatgc ccgttgggct gcaccgatca ggccgaggcg acgggaatgc
     8581 gccggcgatg tcggggcggt gcggtcacct cgaccaactc accaagcagg tagtgggtag
     8641 cggcgtctgt gatacggacc gtggcgtagg ccccggtccg cagcccgtct ccggccgcta
     8701 ggtgcacgag cttgttctgg cgggtccgtc cggtcacctg gtcgggctcc cgcttcgccg
     8761 ggccctcgat cacgacctct tcggtccgtc cgatccgagc ccggtgggta atggtggccg
     8821 atcgctttag aacacgctgg agccgctcga agcggtcgac gcacacttca tgatccacga
     8881 agtcttccac catggttgct gcctctgtgc cctcccgtgg cgaaaaaacg aaacagtagg
     8941 ccgagtcgta gccggcctcg gccaccacct cgagcgtgcg ctcaaagtcg tcgccggtct
     9001 caccggggaa ccccacgatg aggtccgtgg ttacggccag gtcgtcgatc cccatccggg
     9061 cagcttcgag gcgttcgagg taccgctcgg ccgtgtagcc acggtgcatg gcagacagaa
     9121 ttcgatcact gcccgactgg aggggcaggt ggaggtgctc gcatacctcc ggggtgtcgg
     9181 ccatggcgga gatcgtctcg ggacggaggt ccttggggtg tgggctggtg aaccggaccc
     9241 ggcggatccc ctcaacagca ccactggcca ccaacaggtc ggcaaagagc ggtctggccc
     9301 gacgggtcgg gtcggccgtc cagaccgctc ccgcctcata ggcatcggcc ggtcccgcat
     9361 ctatgccgcg aagtcgcagc gtcaggtcac gtccgtagga gttcacgttc tggccaagca
     9421 gggtgatctc gctgaccccg tcggcagcca gggccgccac ctcgtccacc atctgcccaa
     9481 agggtcggct gatctcgggc ccccgcaccg ctggcacgat gcagaatgcg cagctgttgt
     9541 cacagccgat ctgaatggtc acccaggcct tgtggtcagc gtcccgctgg gccggtagcg
     9601 ccgaggggaa ggaatcggcg tcgtcgcgag ccgtctcctc aaggatctct atcaccgggc
     9661 cgtgaccacg cgcctcggcc agaagttcga ccgcccggtg gacgttgtgg gtaccgaaaa
     9721 cgacatcaac gtgtccagcc cgctgctgga tgaggtcacg gtccttctgg gccagacaac
     9781 ctcccaccgc cacctggaca tcgggccgtt cggtcttcag agcttttagg ttgccgaggg
     9841 cgccgtagag cttgttgtcg gcgttctccc ggatacagca ggtatttaga acgatgacgt
     9901 ctgcctcagc ctccgactcg gcggggacca tcccgtcggc ctcgagaaga ccggcgatcc
     9961 gttcgctgtc gtgctcgttc atctgacacc cgtaggtacg cacggcgtag gaccgcacga
    10021 cggtctgctc gttcggggat gtcacggaag aaaggctacg gccccgacac catccccagc
    10081 ccgccgaagc ggagagacgt tgccgaggcc gacgagccag cgacttgtca gcccttcagg
    10141 gagatcaggt gtccaaggag atgggcagat cgtcgacctc ggagaactcc tcaccgccga
    10201 gagccactgc atcggctccc acttcgacag cctcgagctc ctcggactct gctggctgga
    10261 cctcccgcca gacacggtcg gtgatctcga ccatgacctc ggggttgtcg agcaggaact
    10321 tcttggcgtt ctcccggcct tggccgagct gttcgccctc gtacgtgtac caggcacccg
    10381 acttcttgac gatgcccaag tcaactgcca gatcaaccac cgagccctcg cggctgatgc
    10441 ccttcccgta catgatgtca aactcggcct ggcggaacgg cggggcgcac ttgttcttga
    10501 cgaccttcac ccgggtgcgg ttgcccacta cctcgacacc gtccttgatc gcctcgatac
    10561 ggcggatgtc gagacggacc gacgagtaga acttcaaggc ccgtccaccc ggcgtggtct
    10621 ccggcgagcc gaacatcacg ccgatctttt cccgcaactg gttgatgaag atgaggatcg
    10681 tctgggactt gttgagattc gaggtgagct tgcgaagagc ctgggacatg agccgggcct
    10741 gcaggccgac atgggagtcg cccatctcac cctcgatctc ggctcgtggg gtcagggcgg
    10801 ccaccgagtc gacgaccacc acgtcgagcg ccccggagcg gacgagcatg tcggcgatct
    10861 cgagagcctg ctcgccggtg tcgggctggg agatcaaaag ttcgtccaca tcgacgccga
    10921 tggctcgagc gtaggttggg tccatggcgt gctcggcgtc gatgtaggca cagatgcctc
    10981 cattgcgttg ggcttcggcc accacgtggg tggccagcgt ggtcttgccc gagccctccg
    11041 gcccgtagat ctcgaccacc cggccccgcg gaatgccccc gatgccgaga gccaggtcga
    11101 gggccagcgc cccggtgggc actgtctcga tcgacatgga gcccttgtcg cccatcttca
    11161 tgacggcacc ggtgccgaac tgcttctcga tctgacctag ggccatgtcg agtgccttgg
    11221 tgcgctcgga tccagcctca agtgctccgc cgctcatcgt cctgccgtgc tttgccatgt
    11281 ggtgttctcc agtgtgtctg tcggcccggt ggccggttcc agttgatctg ttgtcgagtt
    11341 cggggttgtt ggcggtgaac ttagggatgg cctgtgacag cgtttctgaa gttgctcctg
    11401 aagcgggctt caggaacgct tccctttgaa taacaggagt gtatttccga acaggcgttc
    11461 gatgcaagca ctcggccttt cgaactaccg tcagaccatg gaaacccgca ccggagaccc
    11521 gaaccccgag cagaagcgag ccgcccacgc ggccgccaac ccagatctgg ccgagcggtt
    11581 ggaccccatg gcctggcact gcacccagga ggcgggcacc gagcgagcct ttaccggcac
    11641 ctactgggac gagaagaggg ctggcaccta ccgctgtgcg gcgtgtgacg ccgcggtgtt
    11701 cgacagtgac gccaagttcg actcgggttg cggctggcct agcttcactg cgccggtgcc
    11761 cagcggcccc gatggcgctg tggtcgacgc ccggaccgac tcgagccgcg gcatggtccg
    11821 taccgagacc acctgttcat cgtgcggcgc ccacctcggt cacgtgttcc ccgacggccc
    11881 cggccctacc ggcgaccggt actgcattaa ctcggcctgc ataaccctcg aggagcgttg
    11941 actcgaccac cggatcatcc gcccaacggg aacgcggcga tcacctggta gacggcaccc
    12001 tcgggcaacg tccgacttgc catcaggagc acctcatcga cccggaacga aacggtcacc
    12061 ggtgatccga ccgagccgga cgggagttcg tccctgaaac gacccagcgt caggtgcccg
    12121 acaaacgggc gatacccccg gggggcgatc tccaccggct ggtcgagatg ttcggtggcc
    12181 gccaccatca gggccgccag atcgtcgcag ccttcggccg gcaccatcac cacgccatct
    12241 ccgagcagag cggtggccgg accgagcctc acgtccaccg gagcgatctc gccccacggg
    12301 gctgcggcaa gcaccgccgc cacctcgccg ggatcagcgt cacccagaaa ccggagggtg
    12361 acatgccact gggcccgtgg cagccaacgc agccggggcg cctcaggccg aggaagctga
    12421 tcgagcacgt cggctgcctc ggtcgacggc cgtacggcca caaagaggcg cacggcgacc
    12481 taactcgccg aatctgccgg tcaggcgttc cgacgggcca gcaggcggat gcggagcgcg
    12541 tcgaggaccg tgatgacggt gaactgccgg atgcgtgtcc ggtcgaacgg ccaacgggtc
    12601 cgaaccgcct ggacttcgcc gtccacacag gtggccatcc a
//
LOCUS       DASCMR010000149         1707 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000736638, whole genome shotgun sequence.
ACCESSION   DASCMR010000149 DASCMR010000000
VERSION     DASCMR010000149.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1707)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1707)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1707
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000736638"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1138)
                     /locus_tag="QGG16_03835"
     CDS             complement(<1..1138)
                     /locus_tag="QGG16_03835"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HJP24437.1"
                     /translation="MTDMISPPTGPPTGPPTDEPVDGSLDGALDGPGVEGSDLDLGSY
                     ERVLRRDDTSAVLRLSEAEAAVLAGDPDDPPTGDAADQRMILNMGPSHPSTHGVLRLM
                     LEMEGETILRTKPIIGYLHTGMEKTAEDLTYLQGPTNVTRMDYAAPLFSELAFSLAVE
                     QLLGIDVPPRATWIRMLMCELNRVASHLLFQATNGMDLGAVSMMIYGWREREEVLRFF
                     EKVTGLRMNHNYIRPGGVAADLPDGWQDDLRRLLDLIPPRLDEYDTLLTGQPIFRERL
                     QGVGVMTPAEALALSATGPILRSTGYAWDLRRDQPYLAYDEVEFDVIVGTHGDSFDRY
                     AIRLNEIRESLRIVEQIIDLIPEGDYRTQDKKVTPPPRARIDESM"
     gene            complement(1135..1638)
                     /locus_tag="QGG16_03840"
     CDS             complement(1135..1638)
                     /locus_tag="QGG16_03840"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HJP24438.1"
                     /translation="MSEPEVSDESLLHGVQVVEATGQVVLHPTVDQWLDTVSALKADG
                     FCMAIDVTAVDYSAHPGRTDLPEGVTPERFEVVAAFIDHTRGRRVRLRAQVPEAEPVV
                     PSLFDIFPGTEAMEREAWDLVGVAFAGHPDHTRILMPEDWEGHPLRRDVAIGRIPVQF
                     KDAPAAR"
BASE COUNT          273 a          529 c          616 g          289 t
ORIGIN      
        1 ccatcgactc gtcaatgcgg gcacgcggcg gcggggtgac cttcttgtct tgggtccggt
       61 agtcgccttc ggggatcagg tcgatgatct gctcgacgat tcgcagcgac tcccggatct
      121 cgttgaggcg gatggcgtag cggtcgaacg agtcgccgtg ggtacccacg attacgtcga
      181 actccacctc gtcgtaggcc agatagggct ggtcgcggcg caggtcccag gcgtagccgg
      241 ttgaccgcag gatgggaccg gtggccgaca gggcgagcgc ttcggcaggg gtcatgacgc
      301 ccacgccctg gagccgctcg cgaaagatgg gttgcccggt gagcagggtg tcgtactcgt
      361 cgagtcgggg tgggatcagg tcgagcagcc gccgaaggtc gtcctgccac ccgtcgggga
      421 ggtcggcggc gacccctccg ggccggatgt agttgtggtt catccgcagg ccggtgacct
      481 tttcgaagaa gcggagcacc tcttcgcgct cgcgccagcc atagatcatc atcgacacgg
      541 cgcctaggtc catgccgttg gtggcctgga acaggaggtg tgaggcgacc cgatttagct
      601 cgcacatgag catccggatc caggtggccc gcggcggcac gtcgatgccc aggagttgct
      661 caacggccag ggagaaggcc agttcggaga acagtggggc ggcgtagtcc atccgggtga
      721 cgttggtcgg gccctggagg taggtgaggt cctcggcggt cttttccata ccggtgtgga
      781 ggtagccgat gatcggcttg gtccgcagga tcgtctctcc ctccatctcc aacatgagac
      841 ggagcactcc gtgggtggac gggtgcgacg ggcccatgtt gaggatcatc cgctggtctg
      901 cagcatcgcc ggtgggcgga tcgtcgggat cgccagccag gacggcggcc tcggcctcgc
      961 tcaggcgaag tacggcactc gtgtcgtcac ggcgcaagac gcgctcgtac gagcccaggt
     1021 ccagatcgga gccctcgaca ccggggccgt caagggcgcc gtcgagagaa ccgtcgacgg
     1081 gctcgtcggt cggaggacct gtcggaggac ctgtcggagg actgatcatg tccgtcatcg
     1141 ggcggccggg gcgtccttga actggaccgg aatccggcca atggccacgt cgcgacggag
     1201 cgggtgaccc tcccagtcct cgggcatcag gatccgggtg tggtcggggt ggccggcgaa
     1261 ggccacaccg accagatccc aggcctcgcg ctccatggcc tcggtccccg ggaagatgtc
     1321 gaacagcgat ggcaccacgg gctcggcttc gggcacctgg gcccgcaaac gaacccgtcg
     1381 acctctggtg tggtcgatga atgcggctac tacctcgaag cgctcgggtg tcacgccctc
     1441 gggcaggtcg gtgcgacctg gatgagcgga gtagtccacg gcggtgacgt cgatggccat
     1501 gcagaagccg tcggctttca gggccgaaac agtgtccagc cactggtcga cggtcgggtg
     1561 caacacgacc tgcccggtgg cctcgaccac ctgcacgccg tggagcaggg actcgtcgct
     1621 cacctcgggc tcgctcatcg ggtgcccagt tccacggcct ggacggtctc gacgggagcg
     1681 gcacgcacgt cgacctcgat ggccgcg
//
LOCUS       DASCMR010000150         1802 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000739250, whole genome shotgun sequence.
ACCESSION   DASCMR010000150 DASCMR010000000
VERSION     DASCMR010000150.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1802)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1802)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1802
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000739250"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..523
                     /locus_tag="QGG16_03845"
     CDS             <1..523
                     /locus_tag="QGG16_03845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24439.1"
                     /translation="STPARSSGRLMGHSMVSRLAAVVAGPVAAGGYVLWASIHFDEAF
                     IPLTVQRRLRGDPVDPVRRLWQGLGELFGPDALGDGFHIVAVAVLLVALVVLLRAWPL
                     RYGAFAAACLLVALAADNLNSLERYSLNGVPIVLGVATMAGHRRLGAFVPVASGLALV
                     AMSAAAWSGSYVP"
     gene            complement(1270..1707)
                     /locus_tag="QGG16_03850"
     CDS             complement(1270..1707)
                     /locus_tag="QGG16_03850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24440.1"
                     /translation="MNTDLFDTFPSFAALDLDAVRMFLHLLGVSGWIGGQILMLGLLG
                     VLRGLGAEAPRMAADRFAKVAWPCFALAVVTGIWNLAEVGLSGRSDGYLATMFAKLLL
                     VAVSGAAAAVHSTTRSAAIRGPTGGIGFLAALGALLAGAALGS"
BASE COUNT          274 a          598 c          599 g          331 t
ORIGIN      
        1 atcgacaccg gcccgctcgt caggccgcct gatgggccac tcgatggtga gtcgtctggc
       61 tgccgtagtg gccggcccgg tcgcagccgg gggctacgtg ttgtgggcgt cgattcattt
      121 tgacgaggcg tttattccgc tgaccgtcca gcgccgctta cggggtgatc cggtggatcc
      181 cgttcgtcga ctctggcagg gcctcggaga actgttcggg cccgatgcgc ttggtgacgg
      241 cttccacatt gttgcggtgg ccgtactgct ggtggccctg gtggtgctgt tacgtgcgtg
      301 gccattgcgg tacggggcct tcgcagcggc gtgtctgctg gtcgcgttgg ccgctgacaa
      361 cctgaatagt ctcgagcggt acagcctcaa cggggtcccc atagttcttg gagtggccac
      421 tatggccgga caccgtcgac tcggtgcctt cgtgccggtt gcctcgggat tggcattggt
      481 ggccatgtcg gctgccgcct ggtccggtag ctacgtgccc tgaccgcggc ccggaaaacg
      541 cggaaacggc cccgagtagc ctcccggcga accggtcaac ttctcggagc cgctccgacg
      601 tccctactgc cacctgccgg gtcgtcccgt cgaacgatcc ggtccggagt gtcgccccaa
      661 ggggcttcac cctgatccga caccggagga tccgtcgacc tccggtcccg tatccagctc
      721 gaccaccgac ccccgacggg atcctggtcc accgtttcgt tccccgcccg acggcgtgga
      781 gcgacccggt cgacctggca ccccggttcc gggtccatca tcaggtgtca tccagtgccc
      841 gtcggcgctg gagtgacctg cgatggtccg gtaccggcgg gtgcctcgtc cggccagtcc
      901 gactcgttgc cctaaggctc ctcgtcgtcc cgcccgacct cgacacccct gtgccggtgg
      961 ccgaaccgct ggttccgttc ccgaaggatc gggccagcgt ggttgcggtc ctccccgaac
     1021 acgattcggg ggcttcccca gggtcccgct cctccgtccg acaccggaac ctaagctcct
     1081 gtgccttctg gtggatcggt tccatccggt tccggatccc cgcgccgtgt tcggcgtgga
     1141 cgcatcatga gcccggagaa ccggtcggtc aaccagaaac ggtcttatcc cccggaacgt
     1201 cgacgatttc cacagcacat gggtgggtgg tacacagttc tgtccacaga aacagacgaa
     1261 atacccgtgt caggagccga gggcggcacc ggccagtagc gctccgaggg cggcgaggaa
     1321 gcctatgcct ccggtgggac cgcggattgc ggccgagcgg gtggtggagt gcaccgcagc
     1381 tgcagcaccc gatacggcca ccaggaggag tttggcgaac atggtggcca ggtagccgtc
     1441 cgagcggccc gacagtccta cctcggcgag gttccagatc ccggtcacca ctgccagagc
     1501 gaagcatggc cacgccacct tcgcgaagcg gtcggcggcc atccgtggtg cttcggcgcc
     1561 aaggcctcgc aggactccga ggagtcccag catcaggatc tggccgccta tccaacccga
     1621 gacacccagc agatggagga acatccggac ggcgtcgagg tccaacgcgg cgaacgatgg
     1681 gaaggtgtcg aagaggtcgg tgttcatggc ccgagtctgc cggcgtggag ccggggatcg
     1741 atcttcatga cgaccagacg tcgcgttcga cgaggatggt tcgcagtgtc gaggggctgt
     1801 cg
//
LOCUS       DASCMR010000151         1618 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000746861, whole genome shotgun sequence.
ACCESSION   DASCMR010000151 DASCMR010000000
VERSION     DASCMR010000151.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000746861"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..556
                     /locus_tag="QGG16_03855"
     CDS             <1..556
                     /locus_tag="QGG16_03855"
                     /inference="COORDINATES: protein motif:HMM:NF014788.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AIR synthase-related protein"
                     /protein_id="HJP24441.1"
                     /translation="GTAAVAGDVLVGIESPNLRSNGFSLARRLVFDVAGRSLDDPAWE
                     GASTTLADEMLAPSVIYAPAVVAALAAHEIHAVAHVTGGGLPGNLPRVMDNTLDAVVD
                     RSTWEVPRFFCELQNMGDVSDDEMDRVFNMGLGMVLAVPDRDADAVVAMLASHDRPAR
                     VVGELTAGSGQVRMNGTRQGGIGS"
     gene            553..1134
                     /locus_tag="QGG16_03860"
     CDS             553..1134
                     /locus_tag="QGG16_03860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24442.1"
                     /translation="MSDREALIAHLLEHSIRTGDFTLKSGRKSTWFCDAKQTACRAEG
                     ILLVADAALAEIDSLDAAAAEGVGPITAIGGLTAGADPVAFGIAAVAATRGRYLRSFS
                     IRKESKDHGVQGRLAGALLPGDRVVITEDTVTRGTSPLEAAAAVRALGAEPVAVLPIV
                     DRGGTCGPAAAEMGIAFRPLVTALDLGFPYEGP"
     gene            1195..>1618
                     /locus_tag="QGG16_03865"
     CDS             1195..>1618
                     /locus_tag="QGG16_03865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HJP24443.1"
                     /translation="MPFLPTAAYSIHLQVALDNVPNTLGRLATAIGEAGANIMSMGGF
                     DVRGDLLVNDVVANCRDEDHAAAVVTAIENQAGVEILHWYDRTFDMHVGGKIEVVSLA
                     KVNDRHDLSMAYTPGVARVCIAIHDEPARAHELTIKKNT"
BASE COUNT          252 a          505 c          558 g          303 t
ORIGIN      
        1 cgggactgcg gcggtggccg gcgacgttct ggtcggcatt gaatctccca acctgcggtc
       61 caacgggttc tcgctggctc gccgcctggt cttcgacgtg gccggccgat cgctcgacga
      121 tcctgcatgg gagggtgcgt cgaccacttt ggctgacgag atgcttgctc cgagcgtgat
      181 ctacgccccg gcggtggtgg ccgccctggc tgcccacgag atccatgccg tggcccacgt
      241 aaccggcgga ggcttgcccg gcaacctgcc gcgggtcatg gataatacgc tcgatgcggt
      301 ggtggaccgc tccacgtggg aagtaccgcg gttcttttgc gaactgcaga acatgggcga
      361 cgtgtccgac gacgagatgg accgggtgtt caacatgggc ctcgggatgg tgctggccgt
      421 gcctgatcgt gacgccgatg cggtggtggc catgctggcc tcccacgatc gaccggctcg
      481 ggtggtcggt gaactgacgg ccggtagcgg tcaggtacgg atgaatggga cgaggcaagg
      541 gggcatcgga tcgtgagcga ccgtgaggcg ttgatcgccc atctgctgga gcactccatc
      601 cgcaccgggg acttcaccct caagtcggga cgaaagagca cgtggttctg cgacgccaag
      661 cagacggcct gtcgggctga ggggatcctg ctggtggctg atgctgcgct ggctgaaatc
      721 gactccttgg atgccgccgc ggccgaaggc gtcggcccta tcacggccat tggcggtctt
      781 accgccgggg cggacccggt tgccttcggg atcgccgccg tggctgctac ccgtggtcgg
      841 tatctccggt cgttcagcat ccgtaaggag tccaaggacc acggggtcca gggtcgattg
      901 gccggtgccc tgctgcctgg cgaccgggtg gtcataaccg aggacaccgt cacccggggg
      961 acatccccgc tggaggcggc agcggcagtt cgggcactgg gtgccgaacc ggtggcagtg
     1021 ctgcccatcg ttgatcgggg tggcacgtgt gggccggcag ccgctgagat gggcatcgcc
     1081 ttccgaccac tggtgactgc cctggacctc ggctttccct acgaggggcc ctgactctct
     1141 gattgggatt ttcctgatcg gggcgttcct gtgggtcact cctaggctcg tccgatgccc
     1201 ttcctcccca ccgcggccta ttccatccac ctccaggtgg cattggacaa tgtgcccaac
     1261 actctgggtc gtctggccac cgccattggt gaggccggcg ccaacatcat gtcgatgggc
     1321 ggattcgacg tccgtggcga tctcctggtc aacgacgtgg tggccaactg ccgtgacgag
     1381 gaccacgcgg cggcggtcgt cacggccatc gagaaccagg ccggggtgga gatcctccac
     1441 tggtacgacc gcaccttcga catgcacgtg ggcggcaaga tcgaggtcgt gtccctggcc
     1501 aaggtgaatg atcgccacga tctgtcgatg gcgtacacgc ctggcgtggc ccgggtctgc
     1561 attgccatcc acgatgaacc agctcgggcc cacgaactga ccatcaagaa gaacacgg
//
LOCUS       DASCMR010000152         5502 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000750336, whole genome shotgun sequence.
ACCESSION   DASCMR010000152 DASCMR010000000
VERSION     DASCMR010000152.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5502)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5502)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5502
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000750336"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..218)
                     /locus_tag="QGG16_03870"
     CDS             complement(<1..218)
                     /locus_tag="QGG16_03870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24444.1"
                     /translation="MSTLAAPMPSSALDQDWRKVLRWGFICGGALIALCLVGMPVELD
                     RREIIERYLSLGYLSVVLVPLVIGWVSA"
     gene            complement(215..1345)
                     /locus_tag="QGG16_03875"
     CDS             complement(215..1345)
                     /locus_tag="QGG16_03875"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HJP24445.1"
                     /translation="MPTHAITTKSARRLVSVDRFLTFIRVFLVTVIVVGFLAFIWQQF
                     DADNPFAQWRNPGARGLTGDQFKGLLISGLSQGSMYGLIALGYSMVYGVLGFINFAHG
                     EVFMVGAMTGFIASDKFQANGMWESNFLLCLALIIVMAVFFSTFTAVVMERVAYRPLR
                     NSPRLIPLITSIGVSFFIQNFVLGLFGPATKSYPRLPEWLAKQRSILTFEIAGTRLLV
                     LVVAAVSMAGLWYIVERTKTGKAMRAVAEDKEIASLMGIDVNRTIVTTFAVGGAMAGV
                     GRILWGLMFRSVTHMTGFLPGVKAFTAAVVGGIGNLGGAMAGGISLGSAESIAPLVIL
                     EPLGVPGVSQLKDAVAFTVLVLVLLFKPSGLFGERLSSEDRA"
     gene            1495..2409
                     /locus_tag="QGG16_03880"
     CDS             1495..2409
                     /locus_tag="QGG16_03880"
                     /inference="COORDINATES: protein motif:HMM:NF013247.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class IV"
                     /protein_id="HJP24446.1"
                     /translation="MSRSTHQALTDERNATVEIFINGEFFPRHEAKVSVFDSGFLVGD
                     GVWEGLRLHHGRFAFLDRHLDRLFAGLAATGIDIEMTRDGVANALQATVDHNDMHDDV
                     HVRLMVTRGDKKTPSQHPSNCVGGPNVVIIAEYKAADPAVLESGISLFTATVRRPPPD
                     TLDQRLNCHSKLHEVIALIQAVEAGADEALMLDPTGAVATCNATNFFVVRDGGVWTST
                     GHYNLNGITRQLVLEIAPQAGLTVHEKPFSLTDVYSADEAFVTGTFAGLTPVIAVDGR
                     SIGDGGPGTMTALLRDLYQAAVEADVSR"
     gene            2427..3146
                     /locus_tag="QGG16_03885"
     CDS             2427..3146
                     /locus_tag="QGG16_03885"
                     /inference="COORDINATES: protein motif:HMM:NF040370.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24447.1"
                     /translation="MTLRINCWSGPRNISTSFMYAFGQRADTKVFDEPIYAHYLRVTG
                     RQHPGRAEVLASQDPDGEAVVRDVILGDHPTPVVFFKQMAHHAVDLDLDFLESCRNML
                     LIRDPERVVTSFAKNVPDVGVADTGLSIQVELLEAMLAAGEEPLVVDSAALLASPEPM
                     LRLLCGRLGLPFDPAMLSWPAGPKPADGVWAKHWYASTHRSTGFEAGVPSTEPVPTHL
                     RPVVAEARSLYERLVGYALAV"
     gene            complement(3128..3580)
                     /locus_tag="QGG16_03890"
     CDS             complement(3128..3580)
                     /locus_tag="QGG16_03890"
                     /inference="COORDINATES: protein motif:HMM:NF014091.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF126 domain-containing protein"
                     /protein_id="HJP24448.1"
                     /translation="MPEQVPALMLEGRAMVAGEASGQVLRLDEPLSFWGGLDPATGRI
                     IDRRHPQVGQSVTNQILVMPSGRGSSSGSSTLCEAVRAGTGPAAILMGEPDEIIALGA
                     VVADEIYGRLIPVVVLPADRFDDLSTGVRVEVSGAVCRVGASGQTASA"
     gene            complement(3573..4841)
                     /locus_tag="QGG16_03895"
     CDS             complement(3573..4841)
                     /locus_tag="QGG16_03895"
                     /inference="COORDINATES: protein motif:HMM:NF016310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase X catalytic domain-containing protein"
                     /protein_id="HJP24449.1"
                     /translation="MTLRLDERDAARLAGDEGPAVALAMRVVTRVAEAMEADRLLDVV
                     GAHIDSCLFTGMAALDFADRLAGGGARVSVPTTLNVSSLDLLHPELSRGDPEEARLSR
                     LLMERFEEMGCRPTWTCAPYQLEDRPAFGEHVAWAASNAIVFANSVLGARTHRWGDFI
                     DLCCAITGRAPAAGLHLDANRVATVVVRLSEVSDDLLDRDVLYPVLGGLLGSLVGKAV
                     PAIVGLPSGVSEDRLKAVGAAAASTGSVGLFHVVGSTPEAPTLEAALGGRPPVAEFRI
                     GPSELRVARDRLSTTTDGHLRTVSLGTPHYSVGQFGRLVEVLGDRRVHDGVAVYASTG
                     RDVLHEVELRGWADRLARAGVQLVVDTCTYFTSIIEDTSGTSMTDSAKWAYYAPGNLG
                     VEVVFGSVEDCVESAIAGRVVRDEGLWARA"
     gene            complement(4838..5455)
                     /locus_tag="QGG16_03900"
     CDS             complement(4838..5455)
                     /locus_tag="QGG16_03900"
                     /inference="COORDINATES: protein motif:HMM:NF013630.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HJP24450.1"
                     /translation="MRRLAFSLTVLALVATACGGSDDDPVVVPATTTAIFATTTVDVP
                     TGDASAATTTTEAVYEAPTTTTTTTITAAPATTTEAPPEVAESVTVEAGDSLSKIAKR
                     FGTNVDTLVRINELCDANQIFVGQVILLTDPDADEPAEEGDVLIVTVMAGDSLTKIAK
                     RHDTTVEEIMERNAIDDANLLFVGQELVIDGDVPAPDEPEVNPNC"
BASE COUNT         1019 a         1823 c         1803 g          857 t
ORIGIN      
        1 ctggcagata cccagccgat gacgaggggg accagcacca ctgagaggta gccgagactc
       61 aggtaccgct cgatgatttc tcggcgatcc aactcgacgg gcatgccgac aaggcagagg
      121 gcgatcaggg cgccgccaca gatgaacccc catcggagaa cttttcgcca gtcctgatcc
      181 agagctgagg acggcatggg tgcagccaag gtactcatgc ccgatcctcc gatgagagcc
      241 gctctccgaa gagcccggag ggcttgaaca ggagcacgag gaccagcacg gtgaaggcca
      301 ccgcgtcctt gagttgggac acgcccggca cgccgagcgg ttcgaggatg accagtggag
      361 caatggactc cgctgagccc agagagatgc cgccggccat ggcgccaccc aggttgccga
      421 tgccgccgac caccgctgca gtgaaagcct tgacgccggg taggaagccg gtcatatggg
      481 tcaccgaccg gaacatgagc ccccacagga tccttcccac gccggccatg gcgccaccca
      541 cggcgaacgt ggtgacgatg gtgcggttca cgtcaatccc catgagggac gcgatctcct
      601 tgtcctcggc gacggctcgc atggccttgc cggtcttggt gcgttcgacg atgtaccaga
      661 gtccggccat cgagacggcg gccaccacca acaccagcaa gcgggttccg gcgatctcga
      721 acgtcaggat cgatcgctgc ttggccaacc actccgggag acgggggtag ctcttggtgg
      781 ccggaccgaa cagaccgagt acgaagttct ggatgaagaa cgacacacca atcgacgtga
      841 tcaacggaat gaggcggggc gagttgcgaa gcggccggta ggccaccctc tccatgacca
      901 ccgcggtaaa cgttgagaag aacacggcca tcacgatgat cagggccagg cagagcagga
      961 agttggactc ccacatcccg ttggcctgga acttgtccga ggcgatgaag ccggtcatgg
     1021 cacccaccat gaacacctca ccgtgggcga agttgatgaa gcccagcacg ccgtagacca
     1081 tggagtagcc caaggcgatc aggccgtaca tcgaaccctg ggagaggccg gagatgagta
     1141 ggcccttgaa ctggtcaccg gttagacctc gggcaccggg attgcgccac tgggcgaacg
     1201 ggttgtcggc gtcgaactgc tgccagatga aggccaggaa cccgaccacg atcacggtca
     1261 ccaagaagac cctgatgaag gtgaggaagc ggtcgacgga cacgagtcgt cgcgctgact
     1321 tcgtcgtaat ggcgtgggtt ggcacaggtg ctccgtctga cgtcactggc aaagggcaga
     1381 cggaagatta cctgcccggc ggtgtggtcg cgtgtcctcc gtcaccgttg gcatatcaac
     1441 ggcccgctga catctggccg gccacccggt ggtggccctc ggtacgctcc cgctatgtcc
     1501 cgcagcaccc accaggccct aaccgacgaa cgcaacgcca ccgtcgagat cttcatcaac
     1561 ggcgagttct ttccccgtca cgaggccaag gtgtcggtgt tcgacagcgg cttcctggtg
     1621 ggcgacggcg tctgggaggg gcttcgcctg caccacggcc ggttcgcctt cctggaccgc
     1681 cacctggatc gcctgttcgc cggactggcc gccaccggca tcgatatcga gatgacccgg
     1741 gacggcgtgg ccaacgccct gcaggcaacc gtggaccaca acgacatgca cgacgatgtg
     1801 cacgtacgac tcatggtcac ccggggcgac aagaaaactc cctcccagca cccgtcgaac
     1861 tgtgtgggtg ggcccaacgt ggtcatcatt gccgagtaca aggcggccga tccggcggta
     1921 ctggagtcag gcatctcgtt gttcacggca accgtgcgac gcccgccgcc cgacacgctt
     1981 gaccagcgtc tcaactgcca ctccaagctg cacgaggtga tcgcgctcat ccaagccgtg
     2041 gaggccggtg ccgacgaggc cctcatgctg gatccgaccg gtgcggtggc cacctgcaac
     2101 gccaccaact tcttcgtggt acgggacggc ggcgtgtgga cgtcgaccgg gcactacaac
     2161 ctgaacggca tcacccgcca gttggtgctg gagattgcac cgcaggccgg gctgaccgtc
     2221 cacgagaagc cgttttcgtt gaccgacgtc tactcggctg acgaggcgtt cgtgaccggc
     2281 acgttcgccg gcctgactcc tgtgatcgcc gtcgatgggc gaagcatcgg cgacggtggc
     2341 ccgggaacca tgacggccct acttcgtgac ctgtaccagg cggccgtcga agctgacgtg
     2401 tcccgctgac cagggctgct ttcctgatga cccttcgcat caactgctgg tcgggaccac
     2461 gcaacatctc gacgtcgttc atgtacgcct tcgggcaacg ggccgacacc aaggtgttcg
     2521 acgaaccgat ctacgcccac tacctgcggg tgaccgggcg ccagcacccc gggagggccg
     2581 aggtgctagc cagccaggat cccgacggcg aagctgtagt acgagacgtg atcctcggcg
     2641 accatccgac gccagtggtc ttcttcaagc agatggccca ccacgcagtc gacctcgatc
     2701 tggacttcct cgaatcgtgt cgcaacatgc tcctgatccg ggacccggag cgggtggtga
     2761 cgtcgttcgc gaagaacgtc cccgatgtgg gggtggccga caccgggttg tccatccagg
     2821 tcgagctact ggaggccatg cttgccgccg gcgaggaacc gctcgtggtc gactcagccg
     2881 cactgctggc ctcacccgag ccgatgctga ggctgttgtg tggtcgcctc ggcctgccct
     2941 tcgacccggc catgctctcg tggccggccg ggcccaagcc cgccgacggc gtgtgggcca
     3001 agcactggta cgccagcacc caccggtcca cgggctttga ggccggggtg cccagcactg
     3061 aacccgttcc aacccacctc cgaccggtgg tcgccgaggc ccggagtctc tacgaacgac
     3121 ttgtgggcta cgcgctcgcc gtctgaccgg acgccccgac ccgacagacc gccccggaca
     3181 cctcgactcg gacaccggtc gacaggtcgt cgaaccgatc ggccggaaga acgaccaccg
     3241 ggatcagtcg accgtagatc tcgtcggcca ctacagcgcc gagggcaatg atctcgtctg
     3301 gttcgcccat caagatggcg gccgggcccg tcccggcacg gaccgcctcg cacagggtgc
     3361 tgcttccaga actggagccc ctaccggagg gcatgaccag tatctggttg gtcaccgact
     3421 gtccgacctg ggggtgacgc cggtcgatga tccggccggt cgccggatcg aggccacccc
     3481 agaaactcag aggctcgtcc agacggagga cctggcccga tgcctcgccg gccaccatgg
     3541 cccggccctc aagcatcaga gcaggcacct gctcaggcac gagcccacaa cccttcgtca
     3601 cggaccaccc ggccggcgat cgccgattcg acgcagtcct cgacgctgcc gaacaccacc
     3661 tcgacgccga ggttccccgg cgcgtagtag gcccacttgg ccgagtcggt catcgaagta
     3721 cccgacgtgt cctcgatgat ggacgtgaag taggtgcagg tgtcgaccac caactggacg
     3781 ccggcacggg ccaggcggtc agcccagcca cgcaactcga cctcgtggag cacgtcacga
     3841 cctgtcgagg cgtagacggc aaccccgtcg tggacgcgac ggtcgcccag aacctcgacg
     3901 aggcgaccga actgccccac cgaatagtgc ggcgtgccga ggctgaccgt acgaaggtgg
     3961 ccatcggtgg tcgtgctgag tcggtcccga gcgacccgga gttccgatgg cccgatccgg
     4021 aattcggcca ccgggggacg gcctccaagc gctgcttcga gcgtgggggc ttcgggcgtg
     4081 ctacccacga cgtggaacag gcccacgctg cccgtcgagg ccgcggcggc accgacggcc
     4141 ttcagccgat cctcggagac ccctgacggc aggcccacga tggccgggac ggccttgccg
     4201 accagcgacc cgagcaggcc gccgagtacc gggtagagga cgtcacgatc caggaggtcg
     4261 tcagacacct cgctaagtcg aactaccacg gtggccaccc ggttggcgtc gaggtgcagg
     4321 ccggcagccg gcgcacggcc ggtgatcgca cagcaaaggt cgatgaagtc tccccaccgg
     4381 tgggtgcgtg ctccgaggac agagttagcg aacactatgg cgttggacgc ggcccacgcc
     4441 acgtgctcac cgaaggccgg gcgatcttca agttggtagg gcgcgcaggt ccaggtgggc
     4501 cgacagccca tttcctcaaa ccgctccatg aggaggcgcg acaatcgggc ctcttccgga
     4561 tcaccccggg agagttcggg gtggagcagg tcgagggacg agacgttcag ggtggtcggc
     4621 accgaaaccc gggcgccacc cccagccagg cgatcggcaa agtcgagtgc ggccatgccc
     4681 gtgaacaggc aggagtcgat gtgggccccg acgacgtcca acagtcggtc ggcctccatg
     4741 gcctcggcga cccgggtcac cacccgcatg gccagggcaa ctgccggacc ctcgtctccc
     4801 gccagacgtg cggcgtcgcg ctcgtcgagg cggagcgtca acagttcggg ttgacctcag
     4861 gctcgtcagg agccgggacg tccccgtcga tgaccagttc ctgacccacg aagaggaggt
     4921 tggcgtcgtc gatggcgttg cgttccatga tctcctcgac cgtggtgtcg tggcgcttgg
     4981 cgatcttggt caacgaatcc ccggccatga cggtcacgat gagaacgtcg ccttcctcgg
     5041 cgggttcgtc ggcatccgga tcggtgagca ggatgacctg tccgacgaag atctgattgg
     5101 cgtcgcacag ttcgttgatg cgaaccagcg tgtcgacgtt ggtgccgaac cgcttggcga
     5161 tcttggacag cgaatcgccg gcctcgacgg tcaccgactc ggcgacctcc ggaggtgcct
     5221 ccgtggtggt ggccggcgcc gctgtgatcg tggtcgtggt cgtggtcgtg ggcgcctcgt
     5281 atacggcctc agtcgtggtc gtggcggccg aggcgtcgcc ggtcggtaca tcaaccgtgg
     5341 tggtagcgaa gatggccgtc gtggtggccg ggacgacgac aggatcgtcg tcggagccgc
     5401 cacaggcggt ggcaaccaag gcgagaacgg tcagggaaaa ggcgagcctg cgcatggtcg
     5461 gagcatagat ccggcacccc gccccaccgg gtacccccgt gg
//
LOCUS       DASCMR010000153         3364 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000750928, whole genome shotgun sequence.
ACCESSION   DASCMR010000153 DASCMR010000000
VERSION     DASCMR010000153.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3364)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3364)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3364
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000750928"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..568)
                     /locus_tag="QGG16_03905"
     CDS             complement(<1..568)
                     /locus_tag="QGG16_03905"
                     /inference="COORDINATES: protein motif:HMM:NF024850.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJP24451.1"
                     /translation="MRTRTRWLMALVAAFTLLAGACGSDSADSASSGSSSASATTAAP
                     AATAAPATTAAPATTAAPATTAAPAQEEVGTVADHLGDGSLGEVHVGDGEEIQIRSLN
                     AISGDVAFLGVPNQRGVELAVADYGPIGGHDVTIGTGLDDLCSADGGQAAAQTIVADE
                     DVVGVIGTSCSGAATAAAPLISEAGMVMI"
     gene            724..2448
                     /locus_tag="QGG16_03910"
     CDS             724..2448
                     /locus_tag="QGG16_03910"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJP24452.1"
                     /translation="MFPLKGDWAFEGSLHTRAPNLYGVAGDDFGERPPVDDHGLVVRD
                     HPAPLPEGPATTAEALTAGVRDHPHREALIHGDPLDGGEALTYAELDARVAAAAGGLT
                     ALGIRPGDRVACSLPNRIALVEAFLATQRLGAVWLGINTNLTTDEVSWTLDDSEVNLL
                     VTTDNRADSLRGPALDRRSADRHLLVVDPTNGSGSWADLVDAGHPAPTIDIDPQAPAA
                     IAYTSGTTGRPKGAVHSQHNLLWPGISSRRSYPSVPGERHGTALALTILNMLVLGPLW
                     AYLRGTTAVLVERTDAVGFAAEVRTQRINRVTLVPAIAHDLVAHPDVHRNDLTTLTQT
                     IIGAGHSPPVLRDAWEAKFGTRAIVGYGLTEAPTGVTREHVSRPMRPDGAGYPLEPVR
                     VVIVDDEDQSLPDGDTGEICLAPVTHGPWAGVWTPMLGYLGRPDATAEALRGGVLHTG
                     DLGFLDEHGQLVIRGRRTEMILRGGANVYPAEIERVVLDHPGVREVAVLGLVDDRLGE
                     VVAAGLVAEPGPWADGDPDLLVDDVRSFCQERLARYKVPDQMLVLDRFPRNTMGKVIK
                     GDLAPAFE"
     gene            complement(2452..>3364)
                     /locus_tag="QGG16_03915"
     CDS             complement(2452..>3364)
                     /locus_tag="QGG16_03915"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJP24453.1"
                     /translation="EVVVLLGPSGCGKSTLLRAVAGIEQPLAGRVLWDGEDLTDVPTH
                     QRGFGLVFQDHALFGHRDVAGNVAFGLRVAGLATEARAHRVARSLTLVGLEGFEGRRV
                     DTLSGGEAQRVALARSLAAAPRLLMLDEPLGSLDRSLRERLTAELGVLLRRLGLAALH
                     VTHDRDEAFALADRIAVLGAGRIDRIGTPDEVWNDPGTVHAARCLGHENLIGLDDAGA
                     CALGRLGSGPGIVLLRSDSLSVGTPGEGVSAVVVATSRRSGRMVAHVRVGRLEVRVPV
                     DESIHGVSVGDPVGLVMGHDAVVPLSS"
BASE COUNT          600 a         1241 c         1045 g          478 t
ORIGIN      
        1 agatcatcac catgccggcc tcagagatga gcggtgccgc agcagtggcc gcacccgaac
       61 aactcgtacc aatcacaccg acaacgtctt cgtcagcgac gatcgtctgg gcagccgcct
      121 ggccaccatc agcgctgcag aggtcgtcca gaccggtacc aatggtcacg tcgtggccac
      181 caatggggcc gtagtcggca acagccaact cgacgccacg ctggttcggg acgcccagga
      241 acgccacatc gccggaaatg gcgttcagcg aacgaatctg gatttcctcg ccgtcaccga
      301 catggacctc gccgaggctt ccatcaccca ggtggtcggc aaccgtgccg acctcttcct
      361 gagctggcgc agccgtcgta gccggcgcag ccgtcgtagc cggcgcagca gtcgtcgccg
      421 gagcagcagt cgcagccgga gcagcagtcg tcgccgaagc cgaactacta ccagacgaag
      481 cactgtccgc gctatcggac ccacaggcac cagcaagcag cgtgaatgcc gccaccagtg
      541 ccatcaacca acgcgttcgc gttctcataa accaatccct ccagatgtgg atgtcatcgt
      601 cacggttcgt tgtgacacgc gccactgccg accgaggctc cggaccgtag gacagtccca
      661 cccccgaccg ctagccaagg gacccgattg tcatctattc gtcggatttc ctcttaggcg
      721 tggttgtttc ctctgaaggg agactgggca ttcgagggtt ccctccacac ccgggctcct
      781 aacctctacg gggtggcagg cgacgacttc ggggaacgac cacccgtgga cgaccacggc
      841 ctagtggtcc gtgaccatcc ggccccgctg cccgagggcc cagccaccac cgccgaggcc
      901 ctgacggccg gggtgcggga ccatccccac cgagaggcac tgatccacgg agaccccctt
      961 gatggagggg aggcgctcac ctacgccgaa ctggatgccc gggtggctgc ggcagccgga
     1021 ggcctgacag ccctgggcat caggcccggc gaccgggtgg cctgctcgct ccccaaccgg
     1081 atcgccctcg tcgaggcctt tctggctacc caacgactgg gggccgtctg gttgggcatc
     1141 aacaccaatc tgacaaccga cgaggtgtca tggacgctcg acgactccga ggtcaacctg
     1201 ctggtgacca ccgataaccg ggcggacagc ctccggggac ccgctctcga caggcgctct
     1261 gccgaccggc acctcctcgt ggtcgacccg accaacggat ctggatcgtg ggccgatttg
     1321 gttgacgccg gacacccggc gcccaccatc gacatcgacc cgcaggcccc agcggccatc
     1381 gcctacacat cgggtaccac tggtcgaccc aagggcgctg tgcactccca gcacaacctg
     1441 ctgtggcccg gcatctcgag tcgacggtcc tacccgtccg ttcctggcga gcgccacggc
     1501 accgcgctgg ccttgaccat cctcaacatg ctggtgctcg gtcccctgtg ggcctacctc
     1561 cgtggcacga ccgccgtgct ggtggaacgc accgacgccg tgggtttcgc tgccgaggtc
     1621 cgaacccagc ggatcaatcg ggtcaccctg gtgccggcca tcgcccatga cctggtggcc
     1681 caccccgacg tccaccggaa cgacctgacc accctcaccc agacaatcat cggcgccggg
     1741 cattccccgc ccgtcctccg cgacgcctgg gaggccaagt tcggcacccg ggccattgtc
     1801 ggctacggcc tgaccgaggc cccgaccggc gtcacccgtg aacacgtcag ccgacccatg
     1861 cgacccgacg gcgcgggcta cccgctcgaa cccgtgcggg tggtgatcgt cgacgacgag
     1921 gaccagtccc tgcccgacgg tgacaccggc gagatctgtc tcgcccctgt gacccacggc
     1981 ccgtgggccg gggtgtggac acccatgctg ggttacctcg gtcggcccga cgccaccgcc
     2041 gaggccctac gaggcggcgt cctccacacc ggcgacctgg gtttcctcga cgaacacgga
     2101 caactggtca tccggggccg acgcaccgag atgatcctgc ggggcggagc caacgtgtac
     2161 ccggccgaga tcgaacgggt agtgctcgac cacccggggg ttcgcgaggt ggccgtgctg
     2221 ggcctcgttg acgatcggct cggcgaggtg gtagccgccg gcctggtggc cgagcccggg
     2281 ccatgggccg acggcgaccc ggacctcctg gtcgacgacg tccggtcgtt ctgccaggaa
     2341 cgcctggccc gctacaaggt gcccgaccag atgctggtgc tggacaggtt ccctcgcaac
     2401 accatgggaa aggtgatcaa gggtgatctg gcacccgcct tcgaatagtg gctaactgct
     2461 gaggggcacg acagcgtcgt ggcccatgac gagacccacc gggtcaccga cgctcacacc
     2521 atgtatcgac tcgtcgaccg gcacccggac ctcgaggcgg ccgacccgaa cgtgagccac
     2581 catccgaccg gagcggcggg acgtcgccac cacgacggcc gacacgccct cgccgggggt
     2641 gccgaccgac aggctgtcgg atcgcagcaa cacgatgccg ggtcccgacc ccaggcgccc
     2701 aagggcacac gcgccagcat cgtccaaccc gatcaggttc tcgtgaccca gacaacgggc
     2761 agcgtgcacg gtgcccgggt cgttccagac ctcgtcggga gtgccgatcc ggtcgatccg
     2821 tccggcaccc agcacggcaa tccggtcagc cagggcgaac gcctcgtcgc ggtcatgggt
     2881 gacatgcaac gccgccagac ccaaccgtcg aagcagcacg cccagttcgg cggtcaggcg
     2941 ttctcgtaga gaccggtcta gcgagccgag gggctcgtcg agcatcagca accgcggtgc
     3001 agcggccaac gaacgggcca gagccaccct ctgggcctca ccgcccgaca acgtgtcgac
     3061 ccgccgaccc tcgaatcctt cgagaccgac cagggtcaac gaacgggcca cgcggtgggc
     3121 ccgcgcctcg gtggccaggc cagccacccg gagaccgaac gccacgttgc cggccacgtc
     3181 ccggtgcccg aacagggcgt ggtcctggaa caccagaccg aacccccgct ggtgggtcgg
     3241 cacatcggtc aggtcctcgc catcccacaa aacccggccg gccaatggtt gttcgatgcc
     3301 ggcgactgcc cgcagcaggg tgctcttacc gcagcccgac gggccgagga gcaccaccac
     3361 ctca
//
LOCUS       DASCMR010000154         2715 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000752811, whole genome shotgun sequence.
ACCESSION   DASCMR010000154 DASCMR010000000
VERSION     DASCMR010000154.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2715)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2715)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2715
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000752811"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..226)
                     /locus_tag="QGG16_03920"
     CDS             complement(<1..226)
                     /locus_tag="QGG16_03920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24454.1"
                     /translation="MARESDVLRGVAVGAGSAVLALGVGEFLGVALADASLVASVGDV
                     AVDLAPGWLVRRTIGILGVAQKPVLLTGIVC"
     gene            complement(501..1397)
                     /locus_tag="QGG16_03925"
     CDS             complement(501..1397)
                     /locus_tag="QGG16_03925"
                     /EC_number="1.14.19.-"
                     /inference="COORDINATES: protein motif:HMM:NF012699.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid desaturase"
                     /protein_id="HJP24455.1"
                     /translation="MLYERHAIAPYTGAIGWRSLFNIAWCVSGWVLIVSLELAGKIPL
                     WLAMFLAAVFLQACYMPMHESVHKTLSGGRRSLAWVDRTVGALAGWLLCESFKAHRIT
                     HLKHHTHTNEETDPDVLNSKGSPSQILGRVVAGTVLYPLQPLLAVAPPLRRLIPNGLA
                     VRLGQMAELRGPEAVAAARPVALSHLAVLLVGTIFGYGELVWLLWYIPVWAARFWLSL
                     VFGWLPHHPHTETGRYRDTRVFTFFGSTFLIRGHDYHLLHHLFPVVPHYRLRALWRDI
                     GEHLNEQGARIEGRATRSLSTG"
     gene            complement(1618..2520)
                     /locus_tag="QGG16_03930"
     CDS             complement(1618..2520)
                     /locus_tag="QGG16_03930"
                     /inference="COORDINATES: protein motif:HMM:TIGR01777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HJP24456.1"
                     /translation="MRTVAVTGASGLIGTALTAALEKRGDQVVPVGRRPPAGGVAWDP
                     VARRIDTVALEGIDAVVHLAGERIDGRWTASKKKRILNSRVEGTEVLAEALSGLDRPP
                     SVVVSASAIGFYGDRGDEELTEDSEPGTGFLAEVCKRWEAAAAPIASADTRLVLARTG
                     IVCTPDGGALGRMLTLTRLGLGGRLGSGRQWWPWITLEDEIRALLHLLDTPVAGPANL
                     VAPGTCRNVEFVRELARALRRPAVLPAPALALRAVLGEMADGLLLASARVRPVRLEES
                     GFTFRSPDLTSAIAEMLSPGRPRS"
BASE COUNT          552 a          870 c          825 g          468 t
ORIGIN      
        1 cacagacgat gcccgtcagc agcaccggtt tctgggctac gcccaggatg ccgatggttc
       61 gtcggaccag ccaaccgggc gcaaggtcca ctgcgacatc accgacggag gcgacaagtg
      121 acgcatcggc gagagccacc ccgaggaact cccccacccc gagcgccaga actgccgatc
      181 cggcccctac cgcaacgcct ctcaacacgt ccgactctcg ggccatgacc tggaacctac
      241 ggcaccggtt tgcggtctag ttgctcacga tcagcggtgc ggcgaggtgg tctcgaccgg
      301 gagggactcg atgtttgagg cgttgcgctt caaaactggc gaaaccccgt tgaagcgatc
      361 gatagcgcct ggtctgaggc aggtcctgta ctcaaccgat accgatgctg agcaagtcag
      421 ttcatagcga tcatcaggcc ggcaactaga agtacctcat gattacgaat cccactgccg
      481 cctacttcag ttgtcgtgac ttaccccgtc gacaaagagc gagtcgcgcg accttcgatt
      541 ctcgccccct gttcgttgag gtgttcgccg atatcgcgcc acagtgcccg cagccggtag
      601 tggggcacga ccggaaatag gtgatgcagc aggtgatagt cgtgtccccg gatcaggaac
      661 gtcgacccga aaaacgtgaa caccctggtg tcgcgataac ggcctgtttc ggtatgcgga
      721 tggtggggaa gccaaccgaa caccagcgac aaccagaatc tggcagccca gactgggatg
      781 taccacagca gccagaccag ctcgccgtat ccgaagattg tgccaacgag gagtactgcc
      841 aagtggctaa gggctaccgg tcgggcagca gctaccgcct ctggtccacg aagttcagcc
      901 atttgcccca gccggaccgc caagccgtta gggatcaggc ggcgtagagg cggggccacg
      961 gcgagaagcg gctgaagcgg gtagagcacg gttccagcca ccacccggcc gagtatctga
     1021 ctgggcgacc cctttgagtt caggacatca ggatcggttt cctcgttggt atgggtgtgg
     1081 tgtttcaaat gtgtgatgcg gtgtgctttg aaagactcgc aaagcaacca tccggctaga
     1141 gccccgaccg ttcgatccac ccatgccaag gaacgtcttc cgcccgacaa ggtcttgtgg
     1201 accgattcat gcatcggcat gtagcaagcc tggagaaata cggcagcaag aaacattgcc
     1261 agccacaacg ggatcttccc tgcgagttcg agactgacaa tcagcaccca gccggagaca
     1321 caccacgcga tgttgaacag gctccgccag ccgatcgcac ctgtgtaggg agcgatggcg
     1381 tgccgttcgt acagcaagcg atccgttccg actcttggcc ccacaggact ccccagcctt
     1441 tcagcgcaga cgacacaacc gttgttcaaa agactagttg gggacactcc gtgccggcta
     1501 tcagacagga ggcgcaatag tcgccgctga aggccccgcc ttggcctggc cgataactgg
     1561 ctcaaccgga gtaggacgct ggctattcgg cgtctcccac ggggaggttc gggattgtta
     1621 ggacctcggc cgaccaggag agagcatctc ggctattgca gaggtgaggt ccggtgacct
     1681 gaaggtgaat ccggactcct ccagcctgac tggtcgaacc ctggcactag ccagcagcag
     1741 cccgtctgcc atctcaccga gaacggcccg tagcgccaag gcaggcgcgg ggagcacagc
     1801 tggacgccga agggcacgcg cgagctcgcg aacaaattca acattgcggc aggttccggg
     1861 ggccaccagg ttcgctgggc ccgccaccgg cgtgtccaat aggtggagga gcgcccggat
     1921 ctcgtcttcg agtgttatcc acggccacca ctgtcggccg ctgccaagcc ggccaccaag
     1981 gcccagtcgg gtcagggtca gcattcgccc cagtgcaccg ccgtcgggag tacacacgat
     2041 gccggtgcgg gccagaacca gacgggtgtc ggccgaggcg atcggcgctg ccgccgcctc
     2101 ccatcgtttg caaacttcgg ccagaaagcc ggtccccggc tccgaatcct cggtgagttc
     2161 ctcatcgccg cggtccccat agaagccgat tgccgaggcc gacacgacga cggacggtgg
     2221 ccgatccaac ccggacaagg cttcggccag tacctcagtt ccctctacgc ggctattgag
     2281 gatcctcttc ttcttggatg ccgtccaccg gccgtcgata cgttcgcctg ccaggtggac
     2341 gacggcgtcg ataccttcga gggccactgt gtcgatccgg cgggcaaccg gatcccaggc
     2401 cacgccgcca gcaggtgggc gtcgtccaac gggaacaacc tggtcgccgc gcttttccag
     2461 agcagctgtc agggcggttc caatcagccc tgaggcgcca gtcaccgcca cagtacgcat
     2521 gtcagtttcc tcctcgcaga tccgacgcca gcggatgggc ggtcggcaaa ctcatgggcc
     2581 agtatgtgcg gcgttcgtca gatcgccacc gccaacttgg agtcccgagg agcgaattga
     2641 tggcccactt cagctcaagt gtcagcatcg acgccccccg ggctgtcgtc tgggaggtga
     2701 tcgcggatgt ccgtc
//
LOCUS       DASCMR010000155         2920 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000753544, whole genome shotgun sequence.
ACCESSION   DASCMR010000155 DASCMR010000000
VERSION     DASCMR010000155.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2920)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2920)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2920
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000753544"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..355)
                     /locus_tag="QGG16_03935"
     CDS             complement(<1..355)
                     /locus_tag="QGG16_03935"
                     /inference="COORDINATES: protein motif:HMM:NF012492.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HJP24457.1"
                     /translation="MTIDRGFTLDRFQEEAIAAVDAGRSVLVAAPTSSGKTVVAEHAV
                     EAALTAGRRAFYTTPIKALSNQKFRDLGEMFGLDRVGLMTGDQVVAPDASVVVMTTEV
                     LRNMLYAGSRATDDLA"
     gene            complement(352..1110)
                     /gene="tatC"
                     /locus_tag="QGG16_03940"
     CDS             complement(352..1110)
                     /gene="tatC"
                     /locus_tag="QGG16_03940"
                     /inference="COORDINATES: protein motif:HMM:TIGR00945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0015628 - protein secretion by the type II
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatC"
                     /protein_id="HJP24458.1"
                     /translation="MADVDGRMPLVAHLEELRNRLLRSVAAVLVGTVVCWVLYPQILH
                     LLLEPYCRLREGLADPAMFGNGCELLVTDPLEPFAVRMMVAGYGGVGLAMPVLLWQSW
                     RFIAPGLHTRERRWAIPFVASGLLLFVGGCWLAYWSIPRALDFLVGIGGPDLVSVFSP
                     AKYLSFVVKMTLAFGIGFEFPLVLVCLQLAGILTPAALRQARRYAVVGIVALVAVLTP
                     SGDPFTLMVLSVPMLLFYEVAILIGALRNRRRAE"
     gene            complement(1103..1420)
                     /locus_tag="QGG16_03945"
     CDS             complement(1103..1420)
                     /locus_tag="QGG16_03945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24459.1"
                     /translation="MGNLGSGELLVILILGLLVLGPSRLGVVVQQVGRVVGQLRRMAG
                     GFQEELRDLVEDPSIEALARERGHRVTGGQSSVNGPLDDGSVDDGSVDDGSVDDGEPL
                     TGG"
     gene            1477..2178
                     /locus_tag="QGG16_03950"
     CDS             1477..2178
                     /locus_tag="QGG16_03950"
                     /inference="COORDINATES: protein motif:HMM:NF015000.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HJP24460.1"
                     /translation="MRIVQPILFAHRGGRAHAPENTLDAFRLAVRLGATGLESDVWCT
                     LDGIPVLHHDGRVGRRPRRRDISSLDVAELPDDLPTLANLLAEIDPDLPVSLDVKDPL
                     AAAATIRLAAEYGGTARLWLCHPDHALLATWQDLDSQVRLVHSTSVNRINTSLERHAV
                     DLAASGVDGINLPESDWSTGLVALFRRFGLACFGWDAQHRRQIDRLVNLELDAIYGDH
                     VDRLVDGLRRVHPDS"
     gene            complement(2198..>2920)
                     /gene="lepB"
                     /locus_tag="QGG16_03955"
     CDS             complement(2198..>2920)
                     /gene="lepB"
                     /locus_tag="QGG16_03955"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: protein motif:HMM:NF021981.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HJP24461.1"
                     /translation="DTTGRPALVTRADLADRAAPGALSDPPFPDTFVVPGDPPHSAPP
                     PPVDLELPGAGAGARRALIEWGSVLAGALILAIVVRTFLFGAYYIPSPSMEPTLSKGD
                     RIIVNKVSYRLHDVNRGDLVVFHPTRGATTNGIDDLIKRVIALPGETVRFDAGRVTID
                     GGLLLEPYLTTSDMTEGMGVVPWCVSEVSNQCTVPADHVFVMGDNRGNSRDSRFFGPV
                     PISAITGRAFVRVWSPGSLDRL"
BASE COUNT          565 a         1005 c          878 g          472 t
ORIGIN      
        1 aggccaggtc gtccgtggct ctgctcccgg catagagcat gttgcgaagg acctcggtgg
       61 tcatcacgac caccgaggcg tcgggcgcca ccacctgatc accggtcatc agacccaccc
      121 ggtccagtcc aaacatctca cccaggtcac ggaacttctg gttggacaag gccttgatgg
      181 gtgtcgtgta gaacgcccga cggccagctg tcagcgctgc ctcgacggca tgctcggcca
      241 ccactgtctt gccgctcgat gtcggagctg ccaccagaac cgagcgcccg gcatccacgg
      301 cagcgattgc ctcctcctgg aagcgatcca gtgtgaatcc acgatcgatg gtcactccgc
      361 cctccggcgg tttcgtagcg cgccgatcag gatggccact tcgtagaaga gcaacatcgg
      421 taccgacagg accatgaggg tgaacggatc gccgctggga gtcaggaccg caaccagcgc
      481 cacgatcccg accacggcgt agcggcgggc ctggcgtaac gcggccggag tcaggatgcc
      541 ggcgagctgc agacacacca gcaccagggg gaactcaaac ccgatcccaa aggccagcgt
      601 catcttcacc acgaaactca ggtacttggc cggcgagaag acgcttacca ggtcgggacc
      661 tccgattccc acgagaaagt ccaatgccct gggaatgctc cagtaagcca gccaacagcc
      721 tccgacgaat agcagcaacc cactggccac gaacggaatg gcccaccggc gctcccttgt
      781 atggaggccg ggcgcgatga aacgccacga ctgccacaga agcaccggca tggcaagacc
      841 cacgccgccg tatccggcca ccatcatcct cacggcgaat ggttcaaggg ggtcagtcac
      901 caacaactcg cacccattgc cgaacatggc cgggtcggcc aggccctcac ggagacggca
      961 gtagggctcc aataggaggt gcagaatctg cgggtacagc acccagcaga caaccgttcc
     1021 gaccagcacg gcggccaccg accggaggag gcggtttcgt agctcctcga ggtgggcgac
     1081 caggggcatt cggccgtcga cgtcagccac cggtcaacgg ttccccgtca tcaacggacc
     1141 cgtcatcaac ggacccgtca tcaacggacc cgtcatctag aggtccgtta actgatgact
     1201 gtcctccggt tacacggtgc ccgcgctcac gcgccagagc ttcgatcgac gggtcttcca
     1261 ctaggtcgcg aagctcctcc tggaacccac cagccatccg tcggagctgg ccgacgaccc
     1321 ggcccacctg ttggactacc acgcccaacc gggagggccc gagcaccagc aacccgagga
     1381 tcaggatgac gaggagttcg ccgctcccga gattgcccat agggaccaag cctaggcgtc
     1441 gcccacggag gcaccgatgc ccgccatgat gttccggtgc gcatcgtcca gcccattctc
     1501 ttcgctcatc ggggcggtag ggcccacgcc ccggagaaca ccttggatgc ctttcgactg
     1561 gccgtccgtc tcggggcaac cggtttagag agcgatgtgt ggtgcacact cgacgggatc
     1621 ccggtgctcc accacgacgg ccgggtgggt cggcgtccaa ggcgacgcga catctcgtcg
     1681 ttggatgtcg ccgagctgcc tgatgacctc ccgacactgg ccaacctcct ggcagagatc
     1741 gatccagacc tacctgtctc gctggacgtc aaggacccgc tggccgccgc cgccactatt
     1801 cgtctggcag ccgagtacgg cggaactgcc cgcctgtggc tctgccaccc cgaccatgcc
     1861 ctgttagcga cctggcaaga cctcgactca caggtacgcc tcgtgcactc caccagcgtc
     1921 aaccggatca acacctccct tgaacgtcat gcggtcgacc tggcggcttc cggcgtagac
     1981 gggatcaacc ttcccgagtc ggattggtct accggactgg ttgcgctgtt ccggcgcttc
     2041 ggccttgcct gcttcggttg ggacgcccag catcgccggc aaatcgaccg tctggtgaac
     2101 ctggagctcg acgccatcta cggcgaccac gtagaccgac tagtggatgg ccttcggagg
     2161 gttcacccag actcctgata ccggtcccct agggccctca gagtctgtcg aggctcccgg
     2221 gtgaccagac ccgcacgaac gccctgccgg tgatcgcgct gatcgggacg ggtccaaaga
     2281 atcggctgtc ccgtgagttg ccccggttgt cacccatcac gaacacgtgg tcggcgggca
     2341 cggtgcactg gttgctcact tccgagacgc accagggcac cacgcccatt ccctcggtca
     2401 tgtcggaggt tgtcaggtat ggctccagga gcagcccgcc atcgatggtc acccgtcccg
     2461 catcaaaccg aaccgtctcg cccgggagtg cgatcacccg cttgattagg tcgtcgatgc
     2521 cgtttgtcgt cgcccctctg gtggggtgga agaccaccag gtcgccccgg ttcacgtcgt
     2581 gcaggcgata gctcaccttg ttcacgatga tccgatcccc ctttgagagc gtcggctcca
     2641 tggaaggcga cgggatgtaa taggcgccga acaggaaggt tcgtacaacg attgccagga
     2701 tcaacgcacc ggcgaggaca gatccccact cgatcagtgc ccgacgtgcc cccgctccag
     2761 cgccaggaag ctccagatcc accggcggcg gaggtgccga gtgcggcggg tcccctggca
     2821 caacgaacgt gtcgggaaac ggtggatcag acagagcgcc gggagccgcc ctatcggcaa
     2881 ggtcggcgcg agtcaccagg gccggacgac cggtcgtgtc
//
LOCUS       DASCMR010000156         7361 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000755056, whole genome shotgun sequence.
ACCESSION   DASCMR010000156 DASCMR010000000
VERSION     DASCMR010000156.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 7361)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7361)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7361
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000755056"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..676
                     /locus_tag="QGG16_03960"
     CDS             <1..676
                     /locus_tag="QGG16_03960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HJP24462.1"
                     /translation="VNIARVAIQALAGVLGGTQSLHTDSYDEALALPSEEAVRVALRT
                     QQVIAHETGVVNTADPLGGSAYVEWMTDEMERRAEEVFAHLEGLGDGSLLEGVYAGID
                     SGWFVGEIADAAYRYEREVNAGERIVVGVNAFTEGDDPERRRLLRIGQDTEDLQCKRL
                     ATVRQERDDAVVASTLAQVAANAAQPTVNLMPALVDAVRARATVGEVVDTLEAEFGTY
                     VERAVV"
     gene            691..1077
                     /locus_tag="QGG16_03965"
     CDS             691..1077
                     /locus_tag="QGG16_03965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443172.1"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-dependent protein"
                     /protein_id="HJP24463.1"
                     /translation="MRVVLAKLGLDGHDRGLKVVARMLRDGGVEVVYLGLRQTTDTII
                     DAVEQEDVDVVGISMLNAGHLTLAPRMVQALADAGLDVPVVIGGIVPDEDRPAMAAAG
                     VAGVLGPGASADEVVACIRAAADTRS"
     gene            1084..2130
                     /gene="meaB"
                     /locus_tag="QGG16_03970"
     CDS             1084..2130
                     /gene="meaB"
                     /locus_tag="QGG16_03970"
                     /inference="COORDINATES: protein motif:HMM:TIGR00750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0015819 - lysine transport [Evidence IEA];
                     GO_process: GO:0015822 - ornithine transport [Evidence
                     IEA];
                     GO_process: GO:1903826 - L-arginine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HJP24464.1"
                     /translation="MPGETRSIAELVAAARGGERRATARLLTLVERGGPPADEVAERA
                     WSELGERASGGATGNGHRSHVIGLTGPPGAGKSTLVAAWTTRLVERGRRPAVLAVDPS
                     SPLTGGAILGDRVRMAEATASGVFIRSMATRGHAGGLALAVPGMVRVLELAGFDPVIV
                     ETVGVGQVEVDVASTADTVLVVVTPGMGDAVQANKAGLLEVADVFAVNKSDRPDAADT
                     RRDLELMLDLSDLTGHRRAGTGTGTRPRIISTVATTGVGVDELADVADAHLVAQVAAG
                     ALAGRRENRWRAEVRSHLDRLLLDASRSATAGTLPVSGAPGVVARSLSEWVADRLLGH
                     RIQGDSAAGEPAGY"
     gene            2244..2648
                     /locus_tag="QGG16_03975"
     CDS             2244..2648
                     /locus_tag="QGG16_03975"
                     /inference="COORDINATES: protein motif:HMM:NF016060.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HJP24465.1"
                     /translation="MSLINVFIGQSLLFLFHSVIGWPGAFANMAAVAISSWPAYWLSR
                     HYVWEQEQGGHTVGEIAPFWMLSFAGLFLSTAAVGVVDSIFGGALSVQLANAGAFAAL
                     WIVRYLIFHHVIWGDKAEAPAGEIAGGDSNGI"
     gene            2653..3357
                     /locus_tag="QGG16_03980"
     CDS             2653..3357
                     /locus_tag="QGG16_03980"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HJP24466.1"
                     /translation="MDSVPEAPSPGGIFSTDDARSDRSTEVLAHAVAARGFMPPDEGL
                     ALFDHASSVGQQGIDGPWLEIGSYCGKSACYLGAAAEAAGRQLFTLDHHRGSEENQAD
                     WEHHEPDLVDPAIGRMDTLPIFRRTIHDAGLEGTVVAIVGDSPSVAAVWQTPLALLFI
                     DGGHGTEPAHRDYEGWVPHLTIGGLLLIHDVFASPADGGRPPFEIWSRAVGSGAFTEV
                     NAVGSLRVLRRTGSGI"
     gene            complement(3441..4562)
                     /locus_tag="QGG16_03985"
     CDS             complement(3441..4562)
                     /locus_tag="QGG16_03985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24467.1"
                     /translation="MSLPEVPGVLNAEQLVVTAGTIAEWQLPDGMIPWVPGGHADPWN
                     HTEAAMALAVTGHLDQAEAAYQWLIATQHENGAWHQYYVADGVEDPKFDANVIAYVAT
                     GVWHHWLLTGDRGFLESMWEVVERAIDFVLDLQTPRGEILWARHPDGTPWSFALLTGS
                     SSICHSLRCAVAVAEETGHERPDWELSLGHLAHVVRTRPDGAFTPKDRWAMDWYYPVL
                     GGAISGSDALAHLDARWDEFVIMNPADGAIDGVADGGSLGVRCVSDKHWATAAETSEC
                     AMAYLLAGDRATATDLFRATLPMRQADGRYLTGIVYPDLVTFPTEECSTYTSAAVVLA
                     ADALGGCSPASGVFVDHRSLPDLIAVDGLPLRTPVTEND"
     gene            complement(4549..5349)
                     /locus_tag="QGG16_03990"
     CDS             complement(4549..5349)
                     /locus_tag="QGG16_03990"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HJP24468.1"
                     /translation="MLTADYERLGLIAGETVLDLGCGFGRHAYEALRRGAHVVACDLG
                     FDELRQVRSIGDVMRADGELTNDVVLETANGDAMMLPFADGSFDRIIASEVMEHIDDD
                     AGALAELTRVLRPGGVLAVTIPARLPERICWAISDDYHAPNQPGGHVRIYGNGQLRAL
                     MADAGLEPTDEHRVHALHSPYWWLRCAVGPNRPVADSRLVSLYHRFLTWDIVKAPRTT
                     RLAERLLAPVLGKSLVIYARRPVAGAPPIPHRDASDGPGTREGEHVAA"
     gene            complement(5383..6678)
                     /locus_tag="QGG16_03995"
     CDS             complement(5383..6678)
                     /locus_tag="QGG16_03995"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HJP24469.1"
                     /translation="MSNFPGDAPTGHTDEPLRIAYLAYRGKPHCGGQGVYTRHLTKAL
                     ADLGHHVEVLAGPPYPVLDERVGLVTLPSLELFNDYFPMRKARIWEMKSKWDVAEAMS
                     FNTGNFSEPMAFSMRAWEHLRGRRGEFDLVHDNQCLGWGLLLMKQREQLPVLSTIHHP
                     ITVDRRIEIEHARTRWEEFGKRRWYAFTKMQTQVAKRMTRVMTVSESSAGDIAADHKV
                     DPDRINVVPVGVDPDLFLPVPGVDRVPGRIVTTASADVAMKGLKYLLEAIAKLRTERH
                     VELVIIGKPKEDSASTNVFEDLGLTDCVSYVHGVPDERIVELYSEAELACVPSLYEGF
                     SLPAIEAMSCGVPLVATTGGALPEVTGTHGDTCFQVPPGDSDALAAMIRTALDDPDAR
                     QRVGAAGRQRVIDQWSWRHTALRTVEQYRSLLAETQQAG"
     gene            6787..7248
                     /gene="dtd"
                     /locus_tag="QGG16_04000"
     CDS             6787..7248
                     /gene="dtd"
                     /locus_tag="QGG16_04000"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: protein motif:HMM:TIGR00256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-aminoacyl-tRNA deacylase"
                     /protein_id="HJP24470.1"
                     /translation="MRALVQRVSRASVTVPGTPAGNAVDELVGAIGHGLCVFVGVTHD
                     DGPTEADQLAERLAGLRIMDDADGVMNLSVVDVDGAVLVVSQFTLYGDASKGRRPTWL
                     AAAKPDQAEPLIDRLVANLREQGIQVATGRFRADMVVDLINEGPATLMLET"
BASE COUNT         1164 a         2340 c         2587 g         1270 t
ORIGIN      
        1 ggtgaacatc gcccgggtgg ccatccaggc tttagccggc gtcctgggcg gcacccagag
       61 cctccatacc gattcctacg atgaggccct ggcgcttccg agtgaggaag cggttcgtgt
      121 cgccctccgt acccagcagg tcatcgccca tgaaaccggt gtggtcaaca cggccgaccc
      181 gttgggcggt tcggcttacg tggagtggat gaccgacgag atggaacgcc gggccgagga
      241 ggtcttcgcc cacctcgaag gtctagggga tggctcgctg ctcgagggtg tgtacgccgg
      301 gatcgacagc ggctggtttg tcggcgagat cgccgatgcc gcctaccgct acgagcgtga
      361 ggtgaacgcc ggagagcgga tcgtggtggg cgtcaacgcg ttcaccgagg gcgatgatcc
      421 ggagcgccgc cgcttgctgc gcatcggtca ggacacagag gacctccaat gcaaacgcct
      481 ggctaccgtc agacaggagc gcgatgacgc agtggtggcc tcgacgctgg cccaggtggc
      541 cgccaacgcc gcccagccca ccgtcaacct catgcctgct ctggtcgatg ccgtccgggc
      601 ccgggccacc gtcggcgagg tcgtcgacac gctcgaggcc gagttcggga catacgtaga
      661 acgggcggtg gtgtgatgaa cgagacgccg ttgcgggtcg ttttggccaa gttggggttg
      721 gatggccacg accggggcct caaggtggtg gcccggatgt tgcgtgacgg cggcgtggag
      781 gtcgtgtacc tcggcctacg ccagaccaca gacaccatca tcgacgcggt cgagcaggag
      841 gacgtcgacg tggtcggcat ttcgatgctc aacgccggac acctgacgct ggccccccgc
      901 atggtccagg cgctggcgga cgccggactg gacgtgccgg tggtgatcgg tggcatcgtc
      961 cccgacgaag accgacccgc catggccgcc gccggcgtgg ccggggtgct cggtccgggg
     1021 gcttcggccg acgaggtcgt ggcctgcatc cgggcggccg ccgacacccg gagctgatcg
     1081 gcggtgcccg gggagaccag gtccattgcc gaactagtgg ccgccgcccg gggtggcgaa
     1141 cgtcgggcca ccgctcggct cctgaccctc gtcgaacggg gcgggccacc ggccgacgag
     1201 gtggccgaac gggcctggtc ggaactcggc gaaagggctt ctggcggagc gactggcaac
     1261 gggcatcgtt cccacgtgat cggtctgacc gggccaccgg gtgccggcaa gtccaccctg
     1321 gtcgccgcct ggacaacccg actggtcgaa cgggggcgac ggccggccgt actggccgtc
     1381 gatccgtcgt ccccacttac cgggggtgcc atccttggcg accgggttcg catggcggag
     1441 gccacggctt cgggcgtgtt catccgatcc atggccaccc ggggtcatgc aggaggccta
     1501 gcgctcgccg tgcccggcat ggtgcgggtg ctagagctgg ccggatttga cccggtgatc
     1561 gtcgagacgg tgggcgtcgg ccaggtagag gtcgacgtgg cctccacggc cgacaccgtg
     1621 ctggtggtgg tgaccccggg catgggtgac gcggtacagg ccaacaaggc cggtctactc
     1681 gaggtggccg acgtgtttgc ggtgaacaag tctgatcggc ccgatgccgc ggatacacgg
     1741 cgtgacctcg agctcatgct cgacctctcg gacttgaccg gccataggcg cgccggcacg
     1801 ggtacgggca cccgtccgag gatcatctcg acggtggcca ccaccggggt cggcgtggac
     1861 gaactcgcgg atgtcgccga tgcccacctg gtagcccagg tcgctgccgg tgccctggca
     1921 ggccgccgag agaatcggtg gcgcgccgag gtccgatcac acctagaccg gctgctgttg
     1981 gacgcgtccc gcagcgctac ggctgggacc cttcccgtca gcggtgctcc gggtgtcgta
     2041 gcccgctcgc tctctgagtg ggtggccgac cgtctcctcg gccatcgaat ccagggtgac
     2101 agtgcggcgg gtgaaccagc tgggtactag ggcggcgccg cggatgggga tcgttaggct
     2161 ccccatctgt ggtgtccaac cccctctctc ttccagtgcg actctggcgg gaacatggag
     2221 cgacgcttat ccggttctcc cgggtgtcac tcatcaacgt gttcatcggc cagtccctgc
     2281 tgttcctgtt tcacagcgtc atcggctggc ccggcgcctt cgccaacatg gcggcggtgg
     2341 ccatcagtag ttggcccgcc tactggttga gccgccacta cgtctgggaa caggagcaag
     2401 gaggacacac ggtgggcgag atcgccccgt tctggatgct ctcgtttgcc gggttgttcc
     2461 tgtcgaccgc agcggtcggc gtggtcgatt ccatcttcgg cggtgccctg tcggttcagc
     2521 tggctaacgc cggcgctttc gcagccctgt ggatcgtgcg gtacctgatc tttcatcacg
     2581 tgatctgggg ggacaaggct gaagccccgg cgggagagat cgccggcgga gactccaacg
     2641 gaatctgaat cggtggattc tgtacctgaa gccccctctc ccggaggcat cttctcgaca
     2701 gacgacgccc ggtcggaccg ttccaccgag gtactggccc atgcggtagc cgcccgcggc
     2761 ttcatgccgc ccgacgaggg actcgccctg ttcgaccatg ccagcagcgt cggacaacag
     2821 ggcatcgacg gtccgtggtt ggagatcggc agctactgcg ggaagtccgc ctgctacctc
     2881 ggcgccgcgg ctgaagccgc cggtcgccaa ctgttcaccc tggaccatca tcggggttca
     2941 gaagagaacc aggccgactg ggaacaccat gaacccgacc tcgtcgatcc ggctatcggt
     3001 cggatggaca ccctgccgat cttccggcgc accatccacg atgccgggct ggagggcacc
     3061 gtggtggcca tcgtggggga ctcaccatcg gtggctgccg tgtggcagac cccgctcgcc
     3121 ctgttgttca tcgacggggg gcacggcacc gagccggccc atcgggatta cgagggttgg
     3181 gtaccgcatc taactatcgg cggcctcctt ctgatccacg acgtcttcgc gtctccggcc
     3241 gatggcggtc gcccgccgtt cgagatctgg agccgagcag tcggatcggg ggcgttcacc
     3301 gaggtcaacg cggtcgggtc gctccgagtc ctacggcgca ccggctccgg catctgacgc
     3361 cgcttcccgg tctgggcaac acgcccgcta gcgggtacgg gactgccgcc acatactgga
     3421 ggcgggtcga caacgggaac tcagtcgttc tcggtgaccg gtgttctcag aggtagcccg
     3481 tccacggcaa tcaggtcggg cagagagcgg tggtcgacga agacccccga agcagggctg
     3541 catccgccca gagcgtcagc ggccaacacg accgcagccg acgtgtatgt cgagcattcc
     3601 tcggtcggga aggtcaccag gtctgggtag acgattccgg tcaggtaccg gccgtcggcc
     3661 tgacgcatgg gaagcgtggc ccggaacagg tcggtcgccg tggcccggtc accggccagc
     3721 aggtaggcca tagcgcactc gctggtctca gccgctgtcg cccagtgctt gtccgatacg
     3781 cagcggacgc cgagtgatcc gccgtcggca actccatcga tggcaccgtc ggcagggttc
     3841 atgatcacga attcgtccca ccgggcatct agatgggcca gagcgtcgct gccgctgatc
     3901 gccccgccca gtaccgggta gtaccagtcc atggcccacc ggtccttggg ggtgaacgca
     3961 ccatcgggcc gggtccgcac cacgtgggcc agatggccga gggacagttc ccagtcggga
     4021 cgctcgtgac cggtctcttc ggccaccgcc acagcgcatc ggaggctgtg gcagatgctg
     4081 gacgatccgg tgagcaaggc gaaggaccac ggcgtgccgt cggggtggcg ggcccaaagg
     4141 atctcgccac gtggcgtctg caggtcgagc acgaagtcga tggcccgctc tacgacctcc
     4201 cacatggact caagaaagcc tcggtcgccg gtcaacagcc agtggtgcca caccccagtg
     4261 gccacgtagg cgatcacgtt ggcgtcgaac ttcgggtcct ccacgccgtc ggccacgtag
     4321 tactggtgcc aggcgccgtt ctcgtgctgg gttgcaatca accactggta ggcggcctcg
     4381 gcttgatcaa ggtggccggt taccgcgaga gccatggcgg cctcggtgtg gttccaaggg
     4441 tctgcatgcc caccggggac ccacgggatc atcccgtcgg gtagctgcca ctcggcaatg
     4501 gtgccggctg tgaccaccag ctgttcggcg ttcaggacgc ccgggacctc aggcagcgac
     4561 atgctcgccc tccctggtcc cgggtccgtc tgatgcgtct cgatggggga tcgggggggc
     4621 gccagcgacg ggccggcggg cgtagatcac gaggctcttg cccagcaccg gggccaagag
     4681 gcgttcagcg agccttgtgg tgcggggcgc cttcacgatg tcccatgtca ggaaccggtg
     4741 atagagcgac acgagacggc tatcggcaac gggacggttg ggccccacag cgcatcgaag
     4801 ccaccagtag ggactgtgca gagcgtggac ccggtgttcg tcggtgggct cgaggccagc
     4861 gtcggccatg agggcccgca actggccgtt gccgtagatc cgtacgtggc caccgggctg
     4921 atttggggcg tggtagtcgt ctgatatcgc ccagcagatc cgttcaggca gacgggccgg
     4981 aatggtcacg gccagcacgc ctcccggtcg cagcacgcgt gtcagttcgg ctagggcgcc
     5041 agcatcgtcg tcgatgtgtt ccatgacctc cgaggcaatg atccgatcga aggagccgtc
     5101 ggcgaaggga agcatcatgg cgtcgccgtt ggccgtctcc agcacgacgt cgttggtcag
     5161 ttcgccgtcg gcccgcatca cgtcgccgat ggagcggacc tgacgcagct cgtcgaagcc
     5221 gagatcgcac gccaccacgt gggcgccgcg ccgcagggcc tcgtaggcat ggcggccaaa
     5281 tccgcagccc aggtccagca cggtctcccc ggctatgagg cccagtcgtt cgtagtcggc
     5341 ggtcagcatg ggtcaggttc tggaaggcag gtgatcaggc gcctagccgg cctgctgggt
     5401 ctctgccaga agggagcggt attgctcgac ggtgcgaagc gcagtgtgtc gccagctcca
     5461 ctggtcgatg acgcgctggc ggcccgccgc gcccacccgc tggcgggcgt ctgggtcgtc
     5521 cagcgcagtg cggatcatgg cggccagggc atcgctgtcg ccgggcggca cctggaagca
     5581 ggtatcgccg tgggtaccgg tgacctcggg cagggccccg ccggtggtgg ccaccagcgg
     5641 cacgccacac gacatggctt cgatagccgg cagtgagaac ccttcgtaga gcgagggcac
     5701 gcaggccagc tcggcctcgc tgtacagctc cactatgcgt tcgtcgggca ctccgtgcac
     5761 gtaggacacg cagtcggtga gccccaggtc ctcgaacacg ttcgtcgagg cactgtcctc
     5821 cttcggcttc ccgatgatga ccagctcgac gtggcgttcg gtacgcagct tggcgatggc
     5881 ttccagcagg tacttgaggc ccttcatggc gacgtcggcg ctggccgtgg tcacgattcg
     5941 acctggcacg cgatccacgc cgggcaccgg gaggaacagg tcggggtcca cgccaacggg
     6001 caccacgttg atgcggtccg ggtcgacctt gtggtccgca gcgatgtcgc cggccgacga
     6061 ttcagagacg gtcatgaccc gggtcatccg tttagccacc tgagtctgca tcttcgtgaa
     6121 ggcgtaccag cgacgcttgc cgaactcctc ccagcgggtc cgggcgtgct cgatttcgat
     6181 ccgtcggtcc acggtgatcg gatggtggat ggtggagagc accggcaact gttcgcgctg
     6241 cttcatgagc agcagccccc agcccaggca ttggttgtcg tgcacaaggt cgaactcgcc
     6301 gcgacggcca cgaaggtgct cccaggctcg catcgagaag gccatgggct cggagaagtt
     6361 gccggtgttg aacgacatcg cctcggcgac gtcccacttg gacttcatct cccagattcg
     6421 tgccttgcgc attgggaagt agtcgttgaa caattcgagg ctgggcagcg tgaccagccc
     6481 gacccgctcg tcgagcaccg ggtagggggg gccggccaaa acctcaacgt ggtgcccgag
     6541 gtcggcgagg gccttcgtca ggtgtcgggt gtagacgccc tggccgccac agtggggctt
     6601 accgcggtat gccaggtagg cgatgcgaag cggttcgtct gtatggccgg taggggcgtc
     6661 gccggggaaa ttggacatcc gtcaagtctg gcggcgtcgg gcgttgatcc ctccaccggg
     6721 cgtggtgtca gtcggtatcg gggtgtgtgg ctgcgggatg cgcttttcgc gtcataggtt
     6781 cacaccgtga gagctttggt gcagcgagtt tcgagggcct cggtcacggt gcctgggacg
     6841 ccggctggta atgcagttga tgagttagtg ggcgccatcg gccatggtct gtgcgtgttc
     6901 gtgggggtga cccacgatga cggtcccacc gaggccgatc agttggccga gcggctggcc
     6961 gggctgcgga tcatggacga tgccgacggg gtgatgaacc tctcggtggt cgacgtggac
     7021 ggggccgtgc tggtggtcag ccagttcacc ctctacgggg acgcctccaa ggggcgacga
     7081 cctacgtggc tggccgcggc gaagcccgac caggctgaac cgctgatcga ccggctggtc
     7141 gcgaacctgc gggagcaggg gatccaggtg gccacgggcc gattccgggc cgacatggtc
     7201 gtcgacctga tcaacgaggg gccggccaca ctgatgttgg agacctgaga tggtcgaaaa
     7261 gtggggtgtc agcggccacc agtttgggtc gctagcagat gactacgcac tccaccgggc
     7321 tgactttcca gtagcggaga tgttggaacc agcttctacg g
//
LOCUS       DASCMR010000157         2179 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000756792, whole genome shotgun sequence.
ACCESSION   DASCMR010000157 DASCMR010000000
VERSION     DASCMR010000157.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2179)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2179)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2179
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000756792"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..482
                     /locus_tag="QGG16_04005"
     CDS             <1..482
                     /locus_tag="QGG16_04005"
                     /inference="COORDINATES: protein motif:HMM:NF013412.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HJP24471.1"
                     /translation="LNPPASDHQVRRSLNGNLPNERYVRLTTWTSDGRPKHTPVWIVG
                     LAPGGSDDSQVRVGFTTGSKSWKVRRILRNPAVELQPSDIDGALLPGSLPITASARVV
                     HGPAFRAVRRAVRRKYRLEDLKISLQAIPARLRGRGPLSDCAVVVTLTDWHPTSRQS"
     gene            582..989
                     /locus_tag="QGG16_04010"
     CDS             582..989
                     /locus_tag="QGG16_04010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24472.1"
                     /translation="MLGNNVGSISGPTTMKALPAVGGYPSFETVASGLSGTLAGAEVA
                     SFATYSATMRADGSFYGECPNSGVILAADGVATFRATGIGSPTPEGGFSFRGVTYFDT
                     AAPSLSSLNGIAIVYDWEVDPDGVASWDLWEWK"
     gene            complement(1014..1334)
                     /locus_tag="QGG16_04015"
     CDS             complement(1014..1334)
                     /locus_tag="QGG16_04015"
                     /inference="COORDINATES: protein motif:HMM:NF013494.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4a-hydroxytetrahydrobiopterin dehydratase"
                     /protein_id="HJP24473.1"
                     /translation="MADRTLLTDGERADLATRLPDWELAGDQLRRTFTFANFVEAWAF
                     MAEVAAIAEDLRHHPDWSNSWNRVDMAITTHRLSGPDGANGAGGLTHLDVTFAEAVGR
                     LLGP"
     gene            complement(1367..>2179)
                     /gene="sufC"
                     /locus_tag="QGG16_04020"
     CDS             complement(1367..>2179)
                     /gene="sufC"
                     /locus_tag="QGG16_04020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018226112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HJP24474.1"
                     /translation="LTARVGAIDILHGVDLEVRPGEVHAVMGPNGSGKSTLSHVLMGR
                     PGYEVTGGSVTLDGVDLLALPTWQRARAGLFLALQHPTEVPGVSLESVVAEAGRAAGR
                     PIEGIHELLVAEATRIGFDERLVSRPMNVDLSGGEKKRNEMLMLGALEPKYAVLDEID
                     SGLDVDALAAVSRRVQEATEEDGLGVLAITHFSRLLEVLEPDRVHVLAAGRIQAVGGK
                     ELAQRLEAEGYAGVLAEAGASVGLPAGVTHPHNHEAGFGEDPFADPFAGPTA"
BASE COUNT          394 a          725 c          677 g          383 t
ORIGIN      
        1 cactgaatcc tccagcgagt gaccatcagg tcaggcgctc gttgaacggc aacctgccta
       61 acgagcgtta cgtccgcctc accacctgga cgagcgacgg gcgtccgaaa cacacgccgg
      121 tctggatcgt cgggctggcc cccggagggt cggatgactc ccaggtccgg gtcggcttca
      181 cgacgggttc gaagtcgtgg aaggtgcggc gcatcctcag aaaccctgcc gtcgagttgc
      241 agcccagtga catcgatggc gccctgctcc caggatcgct cccgatcacg gcgagcgctc
      301 gagtcgtcca tggcccggcg ttcagggccg tccggcgggc cgtccggcga aagtaccggt
      361 tggaggatct taagatcagc ctccaggcga tccccgcccg ccttcgcggc cgtggcccgc
      421 tgagcgactg cgcggtggtg gtcacgctga cggattggca tcccacctcc cgccagtcct
      481 aacttccgtc ggagagagca ataccgacag gggggggttt ggggttggaa cacctcctgc
      541 aaagcaggtt gtagtaacag acactattga ggagatcaat catgttggga aacaacgtcg
      601 gttccatttc gggacccacc acgatgaagg ccctcccggc cgtaggcggg tatccgtcgt
      661 ttgagactgt cgcttctggc ctatcaggaa cccttgccgg tgctgaagta gcgagctttg
      721 caacatattc agcgacgatg cgggctgatg gttccttcta cggcgagtgt ccaaactctg
      781 gcgtgatcct ggcagcagat ggagtagcca ccttccgagc gactggaatc gggtccccaa
      841 cacccgaggg cgggttttcg ttcagagggg tcacgtactt cgatactgct gcaccatctc
      901 tctcgtccct gaatggaatc gcaatcgtct acgactggga ggtcgatcca gacggtgttg
      961 catcctggga tctctgggag tggaagtagc ccaacccctc cacaagggtc cgatcagggc
     1021 ccgagaagtc gaccaaccgc ttcggcgaag gtcacgtcga ggtgagtcaa accaccggcg
     1081 ccgttggccc catcaggacc ggacagacgg tgggtggtga tggccatgtc cacccgattc
     1141 cacgagttgg accaatcggg gtggtgtcgc agatcttcgg ctatggccgc cacttcagcc
     1201 atgaacgccc acgcttccac gaagttggcg aacgtgaacg tccggcggag ctgatctccg
     1261 gctagttccc agtcgggcag ccgtgtagcc aggtcggccc gttccccatc ggtcagtagc
     1321 gtccggtcag ccatcggggt tgactcgtca gtgatccgag ccgaactcag gccgtgggac
     1381 cggcgaaggg atcggcgaac gggtcctcgc cgaagcccgc ttcatgattg tggggatggg
     1441 tcacaccggc cggcagaccc accgacgccc cggcttcggc caacacgccg gcgtaaccct
     1501 cggcctccaa cctctgggcg agttccttcc cacccacggc ttgaatccgg ccagcggcca
     1561 gcacgtgcac ccggtcaggc tcgagaacct cgagcaggcg actgaaatgc gtgatggcca
     1621 gcacaccgag cccgtcttct tcagttgcct cctggaccct ccgtgacaca gcggccagag
     1681 catccacgtc gagccccgaa tcgatctcgt cgagcaccgc gtacttcggc tccagggctc
     1741 ccagcatcag catctcattg cgcttcttct caccgcctga caggtccacg ttcatcggtc
     1801 gggacacgag ccgctcgtcg aacccgatgc gggtcgcctc agcaaccagc aactcgtgga
     1861 tgccctcgat ggggcggccg gcggcacggc cagcctcagc caccaccgac tccaagctga
     1921 ccccgggcac ctcggttggg tgctgcaggg ccaggaacag tccggcccgg gcccgctgcc
     1981 aggtgggcag ggccagcagg tccactccgt cgagggtgac cgaccctccg gtcacttcgt
     2041 agccgggacg ccccatcagg acgtgggaca gcgtcgactt gcccgatccg ttggggccca
     2101 tcacggcgtg cacctcgccg ggtcgcacct ccagatcgac gccgtggagg atgtctatag
     2161 cgcccacccg agcagtgag
//
LOCUS       DASCMR010000158         5451 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000759930, whole genome shotgun sequence.
ACCESSION   DASCMR010000158 DASCMR010000000
VERSION     DASCMR010000158.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5451)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5451)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5451
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000759930"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(267..1592)
                     /locus_tag="QGG16_04025"
     CDS             complement(267..1592)
                     /locus_tag="QGG16_04025"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJP24475.1"
                     /translation="MTHETAPSYDFDAVIIGAGVLGGAIAVELARRGLRTLNVDKAPT
                     AGAGSTSNSCAIVRFSYSTVPGVSLAWEAMHYWTDWPAYIGTDDELGLITFNRCGQFN
                     LLVGGDDHSATVRALWEQLGIPFEEWTLDDLTQRMPVLDHGLYGPPKRPDDPHFWDDA
                     HGTVTGALFSPDSGYVSDPQLSCHNLQRAAEAAGGEFWFNAEVISVNRAEDRVSGVTL
                     ADGRRVAAPIVVNVAGPHSAVINRMAGVHDSMNIKTRALRHEVHHVPAPQGFDFMADG
                     MVGADDDTGFYFRPETGNNVLIGSVDPTCDPREFVDPDDYDTSLSQEQWEAQVLRANR
                     RMPNLGVPHEKRGVVDLYDVSDDWLPIYDRTDLNGFYVAIGSSGNQYKNAGAVGQLMS
                     ELIAAVESGHDHDASPVVMTGRYTGWEIDIGFYSRNREINADSSMSVHG"
     gene            1699..2439
                     /locus_tag="QGG16_04030"
     CDS             1699..2439
                     /locus_tag="QGG16_04030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24476.1"
                     /translation="MTTATPRTWSVTARNLPEHADNPIHTDDGARAAGFPAAIVAGTT
                     VHAYLTRPIVEAWGMAWLANGSSTVAFVAPVLADDPVDCVPVVAVDGSVEIQALVGGE
                     LRARLVARPEADTIDDGSQWDGEPLPAHVESLADGWVDYARRAGDDLALYATAGIVHP
                     CLWSSLANGVMVRHLVEGPWIHTSSRIVHYGTVRVGATALVEAKVVDRFETRRGIRAV
                     VDVNISVDGGSVAAVRHEALVSLTPTAL"
     gene            2465..2968
                     /locus_tag="QGG16_04035"
     CDS             2465..2968
                     /locus_tag="QGG16_04035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24477.1"
                     /translation="MDERQICVQRAVCASPGTIFEVLASPAGHVSIDASGMLMSADGD
                     PVSAVGDRFTVQMDRDSLQDFPLGEYEVEVVVTRFEVDRAIAWGIESANLQPPIGHVY
                     GYDLEPIDGGTLVTSTYDWTDVHPDWEAAVDAIFPVISETNLRATLGILARTVAPGQG
                     RPGAGED"
     gene            2972..3220
                     /locus_tag="QGG16_04040"
     CDS             2972..3220
                     /locus_tag="QGG16_04040"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24478.1"
                     /translation="MAWIQTIREDEWEGPLADLYGQVVDDAYGRVDNVMQIHSLNPNA
                     LAGHLAVYRSAMAGTKTLRKVERELVALVVSRYNDCHY"
     gene            3236..3523
                     /locus_tag="QGG16_04045"
                     /pseudo
     CDS             3236..3523
                     /locus_tag="QGG16_04045"
                     /inference="COORDINATES: protein motif:HMM:TIGR01926.1"
                     /note="This protein belongs to a clade of uncharacterized
                     proteins related to peroxidases such as the
                     alkylhydroperoxidase AhpD.; incomplete; partial in the
                     middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peroxidase-related enzyme"
     gene            complement(3556..4593)
                     /locus_tag="QGG16_04050"
     CDS             complement(3556..4593)
                     /locus_tag="QGG16_04050"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HJP24479.1"
                     /translation="MKFQLAINLERLDDSLAMDDVARHTLEMVQMAEAGGFTTAWAAE
                     HHALEMTIAPNPLQILTWWAGHTSRIRLGTAVAVAAYWNPIKLAGEAAFLDLVSDGRL
                     EFGIGSGAYQREFDRMRPGLKQSDAWRYMQEMLPVLKELWAGDYAHDGEFWSFPTSTS
                     VPKPVQQPHPPIWVAARSPITFDYAVANGCNVMSWPIARPFAEAELYREQLDASIAAC
                     PEAPRPTWALMRHTAVYDSADQWMVPVKAAQQQLSQFENLFKNLGDVQDGFPATIPMD
                     QVTNAADYEPATLSENLLFGTPDEVIAKLRRYEVLGVDEFIYYASLGLGLNEQKRSME
                     LFCDEVIPAFS"
     gene            complement(4590..>5451)
                     /locus_tag="QGG16_04055"
     CDS             complement(4590..>5451)
                     /locus_tag="QGG16_04055"
                     /inference="COORDINATES: protein motif:HMM:NF014794.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HJP24480.1"
                     /translation="STFYSWDNVNRNAAIIQVEVEPTAIGRFFPVEVGIHGDAPTVAG
                     QLAAALVSVRGDGTTDAKWARTFADDRAAHQVRREEQASSAYPIQPSGLFRELRAVLP
                     RDAMITLDAGTLCLQATDALDHFEPPCLFSPLDFGLVGFSFACGLGVKLARPDRPVIS
                     LMGDGGFGMTLSELSTAVSHDIPTVTVVMDNGCWGAEKAYQRDFFDGRYIGADVHSPP
                     FERVAELYGAVGLRAERIDEVGEAVRAGLESGRPAVVVVEVDGDALYSFRRDSFAHRT
                     PTDPNSEKLS"
BASE COUNT          909 a         1688 c         1876 g          978 t
ORIGIN      
        1 ctggaccagc acgtgagctg agcgcactgg atttactgct catcgctctt catgctcact
       61 ccgagcggtc aggccaaatg ggatagaaac agcactttgc tgggacagac accggcccca
      121 cagcccagaa acccttcaca tactgggcaa acacaaacct accgagaccc catcaaacga
      181 ggaggtccgg tccagagcgg ggtcttggtc gcgtctggtg gtcagtggcg atgcgtcggc
      241 ctcggcgatc atgtcgaccc aggccgtcag ccgtggaccg acatggacga atcggcgttg
      301 atctcccgat tgcggctgta gaagccgatg tcgatctccc aaccggtgta acgaccggtc
      361 atgaccaccg gtgaggcgtc gtggtcgtgt ccggattcga cggcggcgat tagctcggac
      421 atgagctggc cgacggctcc ggcgttcttg tactggttcc cgctggagcc gatggctacg
      481 tagaaaccgt ttaggtcggt gcggtcgtag atgggtagcc agtcatcgga cacgtcgtag
      541 aggtcgacta cgccccgctt ctcatggggc accccgaggt tgggcatgcg gcggttggcc
      601 cgcagcactt gggcctccca ctgttcctgg ctgaggctgg tgtcgtagtc gtcggggtcg
      661 acgaactccc gggggtcaca cgtcggatcg acgctgccga tcaacacgtt gttgcctgtc
      721 tcgggtcgga agtaaaagcc ggtgtcgtcg tcggcgccca ccatgccgtc ggccatgaag
      781 tcaaagccct gtggcgctgg tacgtggtgg acctcgtggc gcaacgcccg ggtcttgatg
      841 ttcatcgagt cgtgaacgcc ggccattcgg tttatgaccg cactgtgggg gccggccacg
      901 ttgacgacaa tcggggccgc tacccggcga ccgtcggcca gcgtcacgcc ggagacccga
      961 tcctcggccc ggttcactga gatgacctcg gcgttgaacc agaactcccc gcccgccgcc
     1021 tcggcggcac gttgcaggtt gtggcaagac agctggggat cgctcacgta cccggagtcc
     1081 ggcgagaaca acgccccggt aacggttccg tgcgcgtcgt cccagaagtg ggggtcgtca
     1141 ggtcgtttgg gcgggccgta gaggccgtga tcgagcaccg gcatccgttg ggtgaggtcg
     1201 tcgagcgtcc actcctcaaa ggggatgccc agttgttccc acagtgcccg aacggtcgcc
     1261 gagtggtcgt ctccgcctac cagcaggttg aactggccgc accggttgaa ggtgatgagc
     1321 ccgagttcat cgtcggtgcc gatgtaggcg ggccagtcgg tccagtagtg catggcctcc
     1381 caggccaggg acacgccggg aaccgtcgag taactaaagc gcacgatggc acatgagttg
     1441 ctcgtcgacc cggcacccgc cgtaggagcc ttgtcgacgt tcagggttcg caggccgcgg
     1501 cgggccagtt cgacggcgat ggcgccgccg agcacgccgg cgccgatgat gacggcgtcg
     1561 aaatcgtacg acggcgctgt ctcgtgggtc accgcttcct ccttggattc gtatcaccct
     1621 gaggacggcg ctcaggtccg tcggaaccta gttcgttgtg ggaaaccgga ggtctcccgg
     1681 gggtaggttc tgggccctat gacgacggcc acgccacgta cttggtcggt gacggcccgg
     1741 aacctgcccg agcacgctga caacccgatc cataccgacg atggggcgag ggcggctggt
     1801 tttccagcgg cgatcgtggc cgggaccacc gtgcacgcct acctgactag gccgatcgtc
     1861 gaagcgtggg ggatggcctg gctggccaac ggttcgtcca ccgtggcgtt cgtggcccca
     1921 gtgctggccg atgacccggt ggactgcgtt cccgtggtgg ctgtcgacgg gtcggtcgag
     1981 attcaggccc tggtgggtgg ggagctacgg gcccggttgg tcgcccggcc cgaagccgac
     2041 accatcgacg atgggagcca atgggacggc gagccgttgc cggcacatgt cgaatctctg
     2101 gccgatggct gggtcgatta cgcccgacgg gctggagacg acctggccct gtatgcgacc
     2161 gcggggatcg tgcatccgtg tctgtggtcg tcgttggcca acggggtgat ggtccgccac
     2221 ctggtggaag gaccctggat ccacacctct agccggatcg tccactatgg aacggtccgg
     2281 gtcggggcca cggcactggt cgaggcgaag gtggtggacc ggttcgagac ccggcggggt
     2341 atccgcgccg tggttgatgt caatatctcg gtcgacggcg gctctgtggc ggctgtccga
     2401 cacgaggcgt tggtcagcct gacgccgacc gccctctgac cggtcagcgg gcctaccttt
     2461 gaccatggac gaacgacaga tctgtgttca acgggcggtc tgcgcatcac ccggaaccat
     2521 tttcgaagtg ttggccagtc cggccgggca cgtatcaatt gacgcctccg ggatgctgat
     2581 gtcggctgac ggcgacccgg tgtcggcggt tggtgaccga ttcaccgtac agatggaccg
     2641 cgactcgctg caggacttcc ccctgggtga gtacgaggta gaggtggttg tcacccgctt
     2701 cgaggttgac cgggctattg cctggggcat cgagagtgcc aacctgcagc cccccatcgg
     2761 ccacgtctac ggctacgacc tggagccaat cgacgggggc accctggtca cctccaccta
     2821 cgactggacc gacgtccacc cagactggga ggcggccgtc gacgccatct tcccggtgat
     2881 tagcgagacc aacctacggg ccaccttggg catcctggcc cggaccgtcg cccccggcca
     2941 gggccgcccg ggtgccgggg aggactgacc agtggcttgg atccaaacca tccgtgagga
     3001 cgagtgggag ggcccgctgg ccgacctcta cggccaggtg gtcgatgacg cctatggccg
     3061 ggtggacaac gtcatgcaga tccactccct taacccgaac gctctggccg ggcacctcgc
     3121 cgtctaccgg tcggccatgg ccggcacgaa gacgctgcga aaggtcgaac gcgagttggt
     3181 ggccctagta gtcagtcggt acaacgactg ccactactga acggttcacc acgggcgcgg
     3241 tctgcgccga ctcctgaagg acgacgacct gctggccgcc atcgaggacg actggcgcac
     3301 cgctggcctg tctgaccagc gcacagcgat gttggcctac gcggaaaagt tgaccgccca
     3361 tcccggcgac atggtggagg ccgacgtgga ggccctgcgg tccgtcggct tcagtgatcg
     3421 cgacgtgctc gacatctgtg aggtggtggc ctactacgcc tacgccaacc ggatcgtgga
     3481 cggccttggc gtgtcgatgg agtcgtggat ccctgaggac tgaccggtcg gtgtcgggtc
     3541 acggggacct ggggatcagc tgaaggcggg gatgacctcg tcgcagaaca gctccatgga
     3601 ccgcttctgc tcgttgagcc ccaggccgag gctggcgtag tagatgaact cgtccacgcc
     3661 gagcacttcg tagcgtcgga gtttggcgat cacctcgtcg ggggtgccga ataggagatt
     3721 ttcgctcaac gtggccggtt cgtagtccgc agcgttggtc acctggtcca tggggatggt
     3781 tgccgggaat ccgtcttgca cgtcgcccag gttcttgaac aggttctcga actggctgag
     3841 ctgctgttgg gcggccttca cgggcaccat ccactgatcg gccgagtcgt acaccgcggt
     3901 gtggcgcatc agcgcccatg tgggccgggg tgcctcgggg caggcggcga tcgaggcgtc
     3961 caactgttcc ctgtagagct cggcctcggc aaacggtcgg gcgatgggcc acgacatgac
     4021 attgcacccg ttggccactg cgtagtcgaa cgtgatgggt gaccgggcgg ccacccagat
     4081 cggcgggtgg ggctgctgga ctggtttggg taccgatgtc gacgtcggga acgaccagaa
     4141 ctcaccgtcg tgggcatagt cgccagccca caactctttg aggacgggca gcatctcctg
     4201 catgtagcgc caagcgtcgg actgcttaag gccggggcgc atccggtcga actcgcgctg
     4261 gtaggccccc gatccgatgc cgaactcgag gcggccgtca ctcaccaggt ccaggaacgc
     4321 cgcttcgccg gccagcttga tggggttcca gtaggcggcc acggctaccg cggtgcccag
     4381 gcggatccgg ctggtatggc cggcccacca cgtcagaatc tgcagcgggt tgggggcgat
     4441 ggtcatctca agggcgtggt gctcagcggc ccatgcagtg gtgaatcctc cggcctcggc
     4501 catctggacc atctcgaggg tgtggcgggc cacgtcgtcc atggcgagcg agtcgtcgag
     4561 ccgctccagg ttgatggcca gttggaactt catgaaagtt tctccgagtt ggggtcggtg
     4621 ggggttcgat gggcgaacga gtcgcgtcgg aagctataga gcgcatcgcc gtccacctcg
     4681 acgacgacca cggcggggcg acccgactca agcccagccc ggacggcctc gcccacctcg
     4741 tcaatacgtt cggctcgtag accgacggct ccgtagagtt cggcgacccg ttcgaacggg
     4801 gggctgtgca cgtctgcgcc gatgtatcgg ccgtcgaaga agtcgcgctg gtaggccttt
     4861 tcggcgcccc agcagccgtt gtccatgacc acggtgacag tagggatgtc atggctgacc
     4921 gccgtggaca gctccgacag cgtcataccg aatccgccat cacccatcag gctgatcacc
     4981 gggcggtcgg gacgggccag ctttacgcca aggccgcagg cgaaagagaa gcctacgagg
     5041 ccgaagtcca ggggactgaa caggcaggga ggctcgaagt ggtcgagggc gtcggtggcc
     5101 tgtaggcaca gcgtcccggc atccaaggtg atcatggcgt cacggggcag tacggctcgc
     5161 agctcgcgga acaggcccga gggctggatt gggtaggcgc tggatgcctg ctcctcacgc
     5221 ctgacttggt gggcggcccg gtcgtcggcg aaagtccggg cccacttggc gtctgtggtc
     5281 ccgtctcccc taacggagac tagggcggcg gccaactgcc cggccaccgt cggggcatcg
     5341 ccgtggatgc cgacctcgac ggggaagaac cggccgatgg ccgtgggctc gacctccacc
     5401 tggatgatcg cagcgttccg gttgacgttg tcccacgaat agaaggttga g
//
LOCUS       DASCMR010000159         4049 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000760039, whole genome shotgun sequence.
ACCESSION   DASCMR010000159 DASCMR010000000
VERSION     DASCMR010000159.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4049)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4049)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4049
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000760039"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..228)
                     /locus_tag="QGG16_04060"
     CDS             complement(<1..228)
                     /locus_tag="QGG16_04060"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: protein motif:HMM:NF013301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HJP24481.1"
                     /translation="MTHRIRVVGLCGGIGAGKSTVATLLAERGATVIDVDALGRQVLT
                     DDDVHAAVVAEFGDGVLDADGAVDRKALAAEV"
     gene            complement(257..1024)
                     /locus_tag="QGG16_04065"
     CDS             complement(257..1024)
                     /locus_tag="QGG16_04065"
                     /inference="COORDINATES: protein motif:HMM:NF014534.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54 modulation/S30EA ribosomal C-terminal
                     domain-containing protein"
                     /protein_id="HJP24482.1"
                     /translation="MTKPHAVCEVELLTKGPVRPADRTLASAKIQAMCEVGHEPVLSA
                     VVKLRIRDHSMDSLAAIAEATLDLNGVPVRAHSSANTMTEAIDELDDRLTRRLRRHRK
                     RLEDRRHDSEPDASRAHPGYAEVPADDREVVRHKTLAMASMTAEEAVDEMDLLDHGFY
                     LYVDADHDIDRVVYHNGDGLIYVVPSVDGEELPGDTRPPIHPASLVLIHLPVEEAAML
                     LDELDEPFVFFAEPETNRGQVLYRRFDGHYGLITPAV"
     gene            1173..2066
                     /locus_tag="QGG16_04070"
     CDS             1173..2066
                     /locus_tag="QGG16_04070"
                     /inference="COORDINATES: protein motif:HMM:NF013706.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HJP24483.1"
                     /translation="MAFRLAALNDGRAVLLDVGLVDPPGGGGTSTDGATARWWDLGRL
                     TDGRLADPMAAVSASSALDALTDDRGIPAGDPDGMVGLDDLGPPVPRPQKVFGIGMNY
                     LAHIDEMGRAPSSAPVIFTKFPSCLVGPSADVRIVGDRTDYEVELVAVVGRTCRDLDE
                     SEVWDALAGVTVGQDISERTLQNASAPAQFSLGKSYDTFGPIGPAVVSSDLLNEQDDL
                     PLTCAVDGEVRQDSRTSRMIVGVKQLVAYLSAVCTLEAGDLVFTGTPSGVGDAQGRCL
                     GVGQRIDLHIVGVGHMVNHCV"
     gene            complement(2085..3716)
                     /locus_tag="QGG16_04075"
     CDS             complement(2085..3716)
                     /locus_tag="QGG16_04075"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HJP24484.1"
                     /translation="MADALLPLTEDPHATTTYRHLTADGVSTVEGPAGRTFLEVEPEA
                     IRLLAATGMRDIAHLLRPAHLAQVAAILDDPEASPNDRFVATELLQNACIAAGGVLPS
                     CQDTGTAIVSAKKGELVLTGGDDREAISLGVQDTYLTSNLRYSQLAPVDMFTERNTGT
                     NLPAQIEIESVPGSAYKFLFMAKGGGSANKSFLFQETKALLNPESLTRFLEENLRSLG
                     TAACPPYHLAVVIGGTSAEHTMRTAKYASAHYLDNLPTEGSESGHGFRDLDWEQRILD
                     MTRQFGIGAQFGGKYFCHDVRVVRLPRHGASNPVGIAVSCSADRQALGMITADGLFLE
                     QLEEDPARYLPEVTDDDLSTDVVPIDLGQPMDAIRSELSKHPIKTRLALTGTLVVARD
                     IAHAKIAELLDAGQPMPDYLRDHPVYYAGPAKTPEGYASGSFGPTTAGRMDGYVDRFQ
                     EAGGSLVMLAKGNRSRQVTEACARHGGFYLGSIGGPAARLALDSIRKVEVLEYPELGM
                     EAVWRIEVEDFPAFVVVDDKGGDFFDEVSTPVALS"
BASE COUNT          648 a         1228 c         1435 g          738 t
ORIGIN      
        1 cacctctgcg gccagtgctt ttcggtcgac ggcgccatcg gcgtccagca cgccatcgcc
       61 gaactcggcc accacggcgg catgcacatc atcgtctgta aggacctggc ggccgagggc
      121 atccacgtca atcaccgtgg cgccccgttc ggccagcagg gtggccaccg tggacttacc
      181 ggcgccgatg cctccacaga ggccaacgac ccggatcctg tgggtcacca gagggaccga
      241 aagaggcaga tgctgatcag acggcggggg ttatgaggcc gtagtggccg tcgaagcgcc
      301 ggtagagcac ctgaccacgg ttcgtttcgg gttcagcgaa gaacacgaac ggctcgtcta
      361 actcgtcgag cagcatggcc gcctcctcca ccgggaggtg gatcagcacg agcgaggctg
      421 ggtggatagg gggccgggtg tcgccaggaa gctcctcgcc gtccaccgac gggacgacgt
      481 agatgagccc gtcaccgttg tggtacacga cccggtcgat gtcgtggtct gcgtcaacgt
      541 agaggtagaa gccgtggtcc agcaggtcca tctcgtcgac ggcttcctcg gcggtcatag
      601 atgccatggc cagggtcttg tggcggacca cctcgcggtc gtcggccgga acctcggcgt
      661 agccggggtg ggctcgactg gcatccggct cggaatcgtg gcggcggtct tccaggcgct
      721 tgcgatggcg ccggagtcga cgcgtgagac gatcgtcgag ttcgtcgatg gcctcggtca
      781 tggtgttggc cgaggagtgc gcccggaccg gtacaccgtt gaggtcaagc gtggcctcgg
      841 caatggcggc cagcgagtcc atcgaatggt cccgtatgcg cagcttgacc accgcggaaa
      901 gcaccggttc gtgtccgacc tcgcacatgg cctggatctt ggctgaagcc agagtccggt
      961 cagctggccg caccggtccc ttcgtgagca actccacctc gcagacggca tgtggcttgg
     1021 tcaagctcga acctccggtt gtcggggtcg gaccgcccca ttgtgatggt tgacggatcg
     1081 acggtgtgcg tatgtccatc atggcgcgtc gcggcccgcc tgtcaggtct ggttcggcga
     1141 cggatccgcg ctgcgggggc gagactctgg tcatggcatt ccgactggcc gcactcaacg
     1201 acggacgcgc cgtccttctg gacgttgggc tggtggaccc gccgggtggc ggcgggacat
     1261 cgacggatgg ggccaccgcg aggtggtggg accttggtcg gctcaccgac ggccgtctgg
     1321 ccgaccccat ggccgcggtg tcggccagca gtgcgctcga tgcgctgacc gatgatcggg
     1381 gtatccccgc tggggatccc gacgggatgg tcggcctgga cgatctcggc ccaccagtac
     1441 cccgaccaca gaaggtgttc ggcatcggca tgaactatct ggcccatatc gacgagatgg
     1501 gtcgggcgcc atccagcgca ccggtgatct tcaccaagtt cccgtcgtgt ctggtcggcc
     1561 cttcggcaga tgtccggatc gtgggtgacc gcaccgacta cgaggtagag ctggtggcgg
     1621 tagtcggtcg gacctgtcgg gacctcgacg agtccgaggt atgggatgcc ctggccgggg
     1681 tgaccgtcgg tcaggacatt tcggagcgga ctttgcagaa cgcgtcggcc ccagcccagt
     1741 tcagtctcgg aaagagctac gacaccttcg ggcccatcgg gccggccgtg gtctcatcgg
     1801 acctgctcaa cgagcaggac gacctgcctt tgacctgcgc ggtggatggc gaggtccgtc
     1861 aggacagtcg gacaagtcgc atgatcgtag gcgtcaagca gttggtggcc tacctgtcgg
     1921 ccgtgtgcac gctcgaggcc ggtgacctgg tgtttacggg tacgccgtcc ggtgtgggcg
     1981 acgctcaggg gcggtgcctc ggagtgggcc agcggatcga tttgcacatc gtgggcgtgg
     2041 gccacatggt caaccactgc gtctgatcga cgcctcaccg ggtttcagga aagagcgacc
     2101 ggggtcgaca cttcgtcaaa gaagtcgccg cccttgtcgt cgaccaccac gaaggccggg
     2161 aagtcttcga cctctatgcg ccacacggcc tccatgccca gttcggggta ctccagcacc
     2221 tcgaccttgc ggatggagtc cagtgccagc cgggctgcag gaccgccgat ggacccgagg
     2281 tagaagcccc cgtgtcgggc acacgcctcg gtgacctgac gggagcggtt gccctttgcc
     2341 aacatgacga ggctcccgcc ggcctcctgg aaacggtcga cgtagccgtc catgcggccg
     2401 gccgtggtgg ggccgaacga gcccgatgcg tagccctccg gggtcttagc cggaccggcg
     2461 tagtagacgg gatgatcccg caggtagtcc ggcatgggct ggccagcgtc aagcagctcg
     2521 gcgatcttgg cgtgggcgat gtcgcgggcc accacgaggg tgccggtgag tgccagccgg
     2581 gtcttgatcg ggtgcttcga tagttcggac cgtatggcgt ccatgggctg gccgaggtcg
     2641 attggcacga catcggtcga caggtcgtcg tcggtcacct cggggaggta ccgggcgggg
     2701 tcctcctcca gttgctcgag gaacaggccg tcggcggtga tcattccgag ggcctgacgg
     2761 tcggccgaac aggacacggc gatccctacc gggttggacg ctccgtggcg cggcagccga
     2821 accacccgga cgtcatggca aaagtacttg ccgccgaact gggcgccgat cccgaactgg
     2881 cgggtcatgt ccaagatccg ctgctcccag tcgaggtcgc gaaagccgtg gcccgattcg
     2941 ctgccctcgg tgggcaggtt gtctaggtag tgggccgagg cgtacttggc ggtccgcatc
     3001 gtgtgttcgg ccgacgtgcc gccgatgacc acggccaggt ggtacggcgg acaggcggct
     3061 gttcccaggc tgcggagatt ctcctcgagg aagcgggtca ggctctccgg gttgaggagc
     3121 gccttggtct cctgaaagag aaagctcttg ttggccgaac cgccaccctt ggccatgaag
     3181 agaaacttgt aggcgctacc gggaacggac tcgatctcga tctgtgccgg caggttcgtc
     3241 ccggtgttgc gctcggtgaa catgtccacc ggagcgagct gtgagtaacg cagattcgac
     3301 gtgaggtagg tgtcctgtac gccgagcgag atggcctccc ggtcgtcgcc gccagtgagg
     3361 acgagttcgc ctttctttgc cgacacgatg gcggtgccag tgtcctgaca ggaagggagc
     3421 actccgccgg ctgcgatgca ggcgttttgg aggagttcgg tggccacgaa gcggtcgttg
     3481 ggggatgcct cagggtcgtc gaggatggcc gccacctgag ctaggtgagc ggggcgaagc
     3541 agatgggcaa tgtcacgcat gcccgtcgcc gccagtagcc ggatggcctc cggctcgacc
     3601 tccaggaagg tccgtccggc gggaccttcg acggtggaga cgccgtcggc ggtcaggtgc
     3661 cggtatgtgg tggtggcgtg cgggtcctcg gtgaggggga ggagggcgtc ggccatggcc
     3721 tccaacctac cggtcgagcc cgcgacggcc tgcgggggtt cttcgtggga gcgtttggag
     3781 gggtcgctag gtggtcgaca aattggagtc gaccgattcc tagcccacag ggctacccgg
     3841 actgtcgtag gtctagaaag tcagttgggc cacgtaggaa tcttctagtc cgcaactttg
     3901 gttttggctg atgtttccct tgcgcatggt catcgccgcc ttccttgtgc cttcctgacc
     3961 agatgcggtt cggacctgcc tagcaggggg tcggcacccg caccccttca tacgaggggg
     4021 cgacatacgc tcgaatgtgc gggagccac
//
LOCUS       DASCMR010000160         2462 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000761393, whole genome shotgun sequence.
ACCESSION   DASCMR010000160 DASCMR010000000
VERSION     DASCMR010000160.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2462)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2462)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2462
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000761393"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..327)
                     /locus_tag="QGG16_04080"
     CDS             complement(<1..327)
                     /locus_tag="QGG16_04080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24485.1"
                     /translation="MPVILAGLSALAFGFGDLLGGVAIRRSGRPGAALGVAMMATLVG
                     AVLIGLLLVVRPPEVVRWQDIAWPVGAGVLMVATRPLLYLGMARGPVAVFAPSFGLVT
                     IVVPTIV"
     gene            369..1064
                     /locus_tag="QGG16_04085"
     CDS             369..1064
                     /locus_tag="QGG16_04085"
                     /inference="COORDINATES: protein motif:HMM:NF013003.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HJP24486.1"
                     /translation="MEVRGHQITAEADLAGADLTDTDLRTVDLTGAWLGGAVLSGSDL
                     SDARLVGADLRHAICQRTVFADADLHHANLWSADLTDARLGGAVLSRCWLGSARLTGT
                     DLRSSDLGGAWMTATDLTGAALGAATLAGTSMTRTCMREADLTGVFAGGVDLRGAILN
                     GATIRAANLSGAILRHASLIGADLSLSDLIGADLSGAQLDQVILDDIRHDDTTRWPDG
                     FSPPSSGGLDDHD"
     gene            1128..1295
                     /locus_tag="QGG16_04090"
     CDS             1128..1295
                     /locus_tag="QGG16_04090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24487.1"
                     /translation="MSSEWGLETRQIHHGQEADPVIGSRAAPIHQIVNTTQIVLEARL
                     QTLEAGFTASR"
     gene            1308..2399
                     /locus_tag="QGG16_04095"
     CDS             1308..2399
                     /locus_tag="QGG16_04095"
                     /inference="COORDINATES: protein motif:HMM:NF013775.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HJP24488.1"
                     /translation="MTNQNFPTGVDEVTPAWLTSVLRSAGGLDSGSVTGFEAELIGQG
                     IGIMGLLHRLRPTYDGGSGPETVILKSPVQDEGTRFVARTFMFYGKEVAFYRTAADDS
                     PLTTPRCFAADHDSENDEFVLLLEDLADAEVASQLDGCPLDLAEASIRALARHHAAFW
                     ESPAFDAELSWVPYGWDPPMPQGVQHGVATAWEPFLAAFGDDLGDDIRAIGERFPAAA
                     EEMMSFQAGPTTLCHGDYRLDNLFFRPGNDGPEVTAIDWQICIRTAGAYDVGYFISQS
                     LTIEDRRSHERHLLDLYRTCLADEGIDYPADQLFEDYRRTVLFCLCYPIQSGGSIELV
                     NERAVQLVSGMLDRSITAIRDLDAGELMP"
BASE COUNT          465 a          857 c          742 g          398 t
ORIGIN      
        1 cacgatggtc ggaacaacaa tcgtcaccaa cccgaacgac ggagcgaaca ctgccaccgg
       61 gccacgggcc atccctaggt acaggagcgg acgggtggcc accatcagga ccccagcccc
      121 gaccggccac gcaatgtcct gccaccggac gacctcgggt ggtcggacga caagcaagag
      181 accgatcagg acagcgccca ccaacgtggc catcatcgct acaccgagag ccgctccggg
      241 ccgtcccgac cggcgtatag ccacgccccc taacaggtct ccaaagccga aagcgagagc
      301 cgacagaccg gcgaggatga caggcacccg gacatgctgc cctagtctcc acctcaatgg
      361 atgggaccat ggaagtccga ggacaccaga tcaccgccga ggctgacctg gccggcgcgg
      421 acctaaccga caccgacctc cggaccgtag acctcaccgg cgcctggctg ggaggcgccg
      481 tcctctccgg gtcggacctg tccgacgctc gtctagtggg ggctgacctg cgacacgcca
      541 tctgtcaacg gaccgtgttt gccgacgctg acctgcacca cgccaacctg tggagcgctg
      601 atctcaccga tgcccgactg ggtggcgcag tccttagccg atgttggctg ggaagcgccc
      661 gtcttacagg aaccgacctg cggagctccg atctgggcgg cgcctggatg acagccaccg
      721 acctcaccgg cgctgcactc ggcgccgcca ctctggccgg gacctcgatg acccggacct
      781 gcatgcgcga agccgacctc accggggtct ttgccggcgg cgtcgaccta cggggcgcca
      841 tactcaacgg agcaaccatc cgggcagcca acctctccgg ggccatcctc cgccatgcct
      901 cgctcatcgg tgccgacctc agcctctcgg acctcatcgg agccgacctg tcaggagcac
      961 aactcgatca ggtgatcctc gacgacatac gccacgacga caccaccagg tggcccgacg
     1021 gtttcagccc cccgtcatcg ggaggcctcg acgaccacga ctgattctcg ttccgggaat
     1081 cctgcagaag atcgcaccag ataccagacc agacagagag gcgctccatg agtagcgaat
     1141 ggggattaga gacccgacag atccatcacg gccaagaggc agacccggtg attggtagcc
     1201 gggccgctcc gatccaccag atcgtgaaca ccacccagat tgtcctcgag gcccgcctgc
     1261 agaccctcga ggccggcttc acggcctccc gataaagggg cgcgtatatg acgaaccaga
     1321 actttcctac aggtgtcgac gaggtcaccc cggcttggct gaccagcgtc ttgcgctccg
     1381 ccggcggcct tgacagcggc tcggtgactg gcttcgaggc cgagttgatc ggtcagggaa
     1441 tcggaatcat gggtctactc caccgactcc gaccgaccta cgacggaggc tcagggccgg
     1501 agacggtaat cctcaagtct ccggttcagg acgagggaac gcgctttgtg gcccggacct
     1561 tcatgttcta cggcaaggag gtcgccttct atcggacggc ggctgacgac agtccactca
     1621 ccactccccg ctgtttcgct gcggaccacg actcggagaa cgacgagttc gtcctcctgt
     1681 tggaggacct ggccgacgcc gaggtagcga gccagctcga cggctgcccg ctggatctgg
     1741 ctgaggcctc catccgagcc ctggcccgtc atcacgcggc cttctgggag tctccggcct
     1801 ttgacgccga gttgtcctgg gttccctacg gatgggatcc cccaatgccg cagggtgtcc
     1861 agcatggggt ggcgaccgcc tgggagcctt tcctagctgc cttcggagat gacctcggtg
     1921 acgacatccg ggctattggc gagcggttcc ccgctgcggc cgaggagatg atgtcgttcc
     1981 aagccggtcc gaccaccctc tgccacggtg actaccggtt agacaacctc ttcttccggc
     2041 ctggcaacga cgggccggag gtgacggcca tcgactggca gatctgcatc cgtaccgccg
     2101 gcgcctacga cgtcggctac ttcatcagcc agagcctgac catcgaggat cggcgttccc
     2161 atgagcggca cctactcgac ctctaccgga cctgcctggc tgacgagggg atcgattacc
     2221 cggcagacca actcttcgag gactaccggc ggaccgtgct gttctgcctc tgctacccga
     2281 tccagtctgg aggcagcatc gaactggtca acgaacgagc ggtccaactg gtgtcaggca
     2341 tgctcgaccg gtccatcacg gccatccggg accttgacgc cggtgagctc atgccctgag
     2401 gtgggccacg tcgttgaatc ctcgaagtga tggtccggcc ggcccggcgc cgatggtcat
     2461 ga
//
LOCUS       DASCMR010000161         1534 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000761822, whole genome shotgun sequence.
ACCESSION   DASCMR010000161 DASCMR010000000
VERSION     DASCMR010000161.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1534)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1534)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1534
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000761822"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1252)
                     /locus_tag="QGG16_04100"
     CDS             complement(<1..1252)
                     /locus_tag="QGG16_04100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24489.1"
                     /translation="MSELAGADLLPAIHFIFSRAGCDEARDTVVRDGLVLNDDREAEA
                     VDAHIAERLESLGESDRAALRVDHWADVLRRGIASHHAGLVPIFKEVTEELFVAGLVK
                     LVYATETLALGVNLPARSVVIDRLTKFTGETHEVLTPGQFTQLTGRAGRRGLDVEGHA
                     LVCWSPFVPFDRVAGLAGSRDFVLRSAFRPTYNMVANMVEGRTRVQAVDLLTRSFAQF
                     QMDRQMATRLRRNSEKYNEAALIRRRLDNEARPPVAQAGGKLVSAAVLRPGDIVVPDD
                     GLAHVVLSVANRGGGRIRVRTLSQEGRASVLSDGSVDGDDLVGDPELVGQMELPAPFV
                     PDDREFRREVARRLSDFAVDPSHRTARAVATNGAPGLAGDRKRLLRLERDLAREADRP
                     ADVESDLTARFDAALDVLSARGMVD"
BASE COUNT          280 a          535 c          470 g          249 t
ORIGIN      
        1 catcaaccat tccccgtgcc gacaggacgt ccaaggcagc atcgaaccgt gcggttaggt
       61 cactctcaac gtcagccggt cgatcagcct cgcgagcgag atcgcgttca agcctgagca
      121 gtcgtttccg atcgccggcc agacccgggg ccccattcgt cgccacagcc ctggctgtcc
      181 tatgtgacgg gtccacggcg aagtcggata gccgacgcgc cacttcgcga cggaactcac
      241 ggtcgtcggg cacgaaaggt gcagggagct ccatctggcc aaccagttcc ggatcaccga
      301 ctagatcgtc gccatcgacg gagccgtccg acaacacgct cgcccgaccc tcctggctga
      361 gggtacgtac ccggatacgc ccaccacccc ggttggccac cgacaggacc acatgggcca
      421 atccatcgtc gggcacgacg atgtcgccgg ggcggagtac agcagccgag acaagcttgc
      481 cccctgcctg cgcaaccggt ggccgtgcct cgttgtccag acgcctacgg atcagcgctg
      541 cctcgttgta cttctccgag tttcgacgca acctcgtggc catttggcgg tccatctgaa
      601 actgggcgaa cgatcgcgtc aggaggtcca cggcttgtac ccgtgtccgg ccctcgacca
      661 tgttggccac catgttgtag gtcggccgga acgccgatcg aaggacgaag tcccggctgc
      721 cggccagccc ggccacgcga tcgaagggca cgaagggtga ccagcagacc aacgcatggc
      781 cttcgacgtc taggccacgc cgtccggctc gtcccgtcag ctgtgtgaac tggccgggcg
      841 tcagaacctc gtgggtctcg ccggtgaact tggtgaggcg gtcgatgacc acagaacgcg
      901 ccgggagatt caccccgagg gccagtgtct cggtggcgta gacaagtttc acgagaccgg
      961 cgacgaagag ttcctcggtt acttccttaa agatgggtac aaggccagcg tgatgggatg
     1021 cgatgccccg acgtagcaca tcggcccaat ggtcgactcg caatgccgcc cggtccgatt
     1081 cccccaacga ctccaggcgc tcagcgatgt gagcgtcgac ggcttccgcc tcgcgatcat
     1141 cgttgagaac caggccgtcg cggaccacgg tgtcgcgggc ctcgtcacaa ccggctcgac
     1201 tgaagatgaa gtggattgcc gggagcaggt cggcgcccgc caactcggac accacctcgt
     1261 ttcgccgagg cggaacccag ggtccactcc tcccccggcc acggtgcctg ccgccggact
     1321 ggcccccgga ggagcgacca ttctgatcga agcgccgccc gaccgggttg ggcttgccgc
     1381 cattgaccag cagagctgtc cgatggacct tccggctcgc accatggcga ccacgctccg
     1441 ccaccaggta gtgagcccgg agacggactg gacgccgggt ctccacgatc acgtcggtcg
     1501 gccctcgtac cgacgtcacc cagtcgccta actc
//
LOCUS       DASCMR010000162         1555 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000788400, whole genome shotgun sequence.
ACCESSION   DASCMR010000162 DASCMR010000000
VERSION     DASCMR010000162.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1555)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1555)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000788400"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..754
                     /locus_tag="QGG16_04105"
     CDS             <1..754
                     /locus_tag="QGG16_04105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJP24490.1"
                     /translation="YGLPRDQRNTGRVEEVLATVGLTGFGDRSPATLSGGQQQRVALA
                     RALAPRPEVLLLDEPFSNLDTGLRTEIRTEVHRLLTELGITAVFVTHDQEEAFVLGDR
                     IAVMNDGRIEQLALPSEIYTRPASRWIASFVGEVNLFGAEASDATAHLPFGDVSLLRN
                     ADGHNDGPVEVLLRPEDLLVAKVDSSPSDDVPGHGSVELVEYYGHDAMVLVRLDDGSG
                     LRIRTGPVSPAVRGDRVVVTYRGLPTTAFPRV"
     gene            782..>1555
                     /locus_tag="QGG16_04110"
     CDS             782..>1555
                     /locus_tag="QGG16_04110"
                     /inference="COORDINATES: protein motif:HMM:NF013434.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJP24491.1"
                     /translation="MGAAKPTVSEHPVVVIGAGPTGLAAARRAAQSGHRVVLLERADE
                     VGGMAASPTIAGQRVDLGSHRLHPSIEPEILADLRDLLGDELQVRTRNGRIRLDDRWI
                     AFPLRTLDLLRSVSPKFALGAALDAMTSPLRRPRADTFAAHLRAGLGPTVSQAFYEPY
                     ATKLWGVSADELDASLARRRVSAGSPLAIIRKIARGVSPTGRTFLYPRDGYGRICERL
                     AESAIESGVDIQLSTEITGIRLNDGSATIKLTDGDLPAHR"
BASE COUNT          291 a          537 c          437 g          290 t
ORIGIN      
        1 ctacggtctc ccccgcgacc aacgaaacac tggccgcgtc gaagaagtct tggcaactgt
       61 cggcctcaca gggttcggag atcgctcacc ggccaccctc tccggtggac agcagcagcg
      121 cgtggctctc gcacgggccc tagctccccg gccagaggtt cttttactcg acgaaccgtt
      181 ctccaacctc gataccggac ttcgcacaga gattcgcacc gaagtacacc gacttctcac
      241 cgagctcggc atcaccgctg tgtttgttac ccacgatcag gaagaggcct tcgtgttagg
      301 tgaccggatc gccgtaatga acgatggccg aattgagcaa ctcgcccttc catccgagat
      361 ttatacacgt ccagccagcc ggtggatcgc ctccttcgtg ggcgaggtca acctcttcgg
      421 ggccgaggcc agcgacgcca ccgcccacct ccccttcggt gatgtctccc tcctgcgtaa
      481 tgccgatggc cacaacgatg ggccggtaga ggtgctgctc cgaccagaag acctcctggt
      541 tgccaaggtc gacagcagcc cctcggatga cgtccccggg cacggctcgg tcgagctcgt
      601 cgagtactac gggcatgacg ccatggtcct agtccgcctc gacgatgggt ctggcctccg
      661 gatccgcacc gggcccgtct ctccagccgt ccgaggcgac cgggtagtcg ttacctaccg
      721 gggtctaccg acgaccgcgt ttcctagggt ctgaccagcc accaccggtt cgctgaatcc
      781 catgggcgcc gccaagccga ctgtctcaga acacccggta gtagttatcg gcgcaggtcc
      841 aaccggactg gcggccgccc gtcgggccgc gcaatccggc caccgagtag ttctcctcga
      901 gagggccgac gaagtcggag gtatggctgc aagccctacc atcgcgggcc aaagggttga
      961 tctaggttcg caccgtctcc acccctcgat cgagccagag attctcgccg accttaggga
     1021 ccttctcgga gacgagttgc aggtccgcac tcgcaacggc cgcatccgtc tcgacgatcg
     1081 atggatcgcg ttcccgctac ggaccttgga ccttctacgc agtgtgagtc ctaagttcgc
     1141 cctcggtgcc gcgctagatg ccatgacatc accgttgcga agaccccgtg ccgacacctt
     1201 cgctgcccac ctccgagccg ggctcggacc tacggtcagt caagcatttt atgaaccgta
     1261 cgccacgaag ctgtggggag tcagcgccga cgaactcgac gcctccctgg cccgccgtcg
     1321 agtatctgcc ggctcaccac tagcaatcat ccgtaaaatt gcacgcggtg tctctccgac
     1381 gggtcgaacg tttctatacc cgcgcgacgg ctacgggcgt atctgcgaac gattagctga
     1441 gtcagccatc gaatcgggtg tggacatcca gctttcaacc gagatcaccg gcatccgact
     1501 caacgacggc tctgcgacga tcaaactgac ggatggggat ctcccagcac atcgg
//
LOCUS       DASCMR010000163        19378 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000804822, whole genome shotgun sequence.
ACCESSION   DASCMR010000163 DASCMR010000000
VERSION     DASCMR010000163.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 19378)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19378)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19378
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000804822"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..181)
                     /locus_tag="QGG16_04115"
     CDS             complement(<1..181)
                     /locus_tag="QGG16_04115"
                     /inference="COORDINATES: protein motif:HMM:NF013434.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJP24492.1"
                     /translation="MSDFPTRANVVVIGAGIVGNCLVGHLARLGWTDLVLLEKGPLPN
                     PGGSTGHASNFIFPVD"
     gene            505..1272
                     /locus_tag="QGG16_04120"
     CDS             505..1272
                     /locus_tag="QGG16_04120"
                     /inference="COORDINATES: protein motif:HMM:NF024950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJP24493.1"
                     /translation="MLITGGASGIGRAMAEAFSDAGARVHVADLPASRGGQPEGCGFS
                     GVDVSDPAGVDELFATVLAPADAGGLGGLDVLCANVGIAGPTGPIEDLDAEGWDQTMA
                     VNVRSAFLCCRRAVPAMRATGGGSILLTSSTAGITGFPMRSPYAASKYAIIGLGDTLA
                     MEVGEFGIRVNVLCPGSVDGDRMVRVIDAEAAATGESAADLRAAYEKQVSMRTFVEGR
                     DIAAMAVFLASPAARFVNGQTISVDGGLETLRTSWRT"
     gene            complement(1319..2062)
                     /locus_tag="QGG16_04125"
     CDS             complement(1319..2062)
                     /locus_tag="QGG16_04125"
                     /inference="COORDINATES: protein motif:HMM:NF013757.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HJP24494.1"
                     /translation="MQIVQSIDRAFQILTEVADDPSGISEISRRLGLPTSTVARLLAT
                     LEQLGAVERLADDSGYRIGPSVVTMAASVDTTQSLLAVAQPTMQELVDLVAEAVGLSI
                     PAGYDVHYIGQIDCANPVQVRDWTGVSLPMHIVPSGMVVLAHWPDEAVDRYLNRNLDR
                     YTPRSVTMPDRIRARLDEVRETGIFWMEEEFSEGINSVAAPLFNQVGAVVGALHSHGP
                     SYRFPDKTLKDIVADRVRWAADEISSALG"
     gene            2355..3062
                     /locus_tag="QGG16_04130"
     CDS             2355..3062
                     /locus_tag="QGG16_04130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="B12-binding domain-containing protein"
                     /protein_id="HJP24495.1"
                     /translation="MAEEQNIEEEIILADLSDEDLTAQMHDDLYDGLGDEISEGTNIL
                     LGRGWDPGRVLNDALVEGMRIVGIDFRDGILFVPEVLLSANAMKAGMAILRPLLAETG
                     AEPIGKVVIGTVKGDIHDIGKNLVGMMLEGAGFEVIDLGINTDVEEFLGALDEHKPDI
                     LGMSALLTTTMPYMKVVIDTLEEKSLREEYSVIVGGAPLNEEFGEAIGADAYCRDAAV
                     AAETASRLVSERRAAAA"
     gene            3071..3739
                     /locus_tag="QGG16_04135"
     CDS             3071..3739
                     /locus_tag="QGG16_04135"
                     /inference="COORDINATES: protein motif:HMM:NF019413.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1638 domain-containing protein"
                     /protein_id="HJP24496.1"
                     /translation="MNEPTGATEAPGGRTLVVACGALARELLQVVEANGLTHVDVECL
                     PASYHNTPDVIPQAVATRVRAAADHYQRIFVGYGDCGTGGRLDAVCTELGIDRLPGDH
                     CYEFLAGSAAFTDLHAEELGTFFLTDYLVKHFDRLVVKAFWLDTHPEMLEAVFGNYRR
                     LAYLSQVDDPDLLEQARAAAIRLGLAFEHRPTGLGNLETHLLAGTSVAITGPARSPLP
                     TGAH"
     gene            3744..4043
                     /locus_tag="QGG16_04140"
     CDS             3744..4043
                     /locus_tag="QGG16_04140"
                     /inference="COORDINATES: protein motif:HMM:NF025142.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor"
                     /protein_id="HJP24497.1"
                     /translation="MAAQLVTIYWRDIPAQITAQQGRTREKALLDARFQHAIDRAAMI
                     AGMDDTDSYVAQWRRESVSLTADMAAAVADEAARIDAAYDRDRLERLVLSGGVDN"
     gene            4088..4984
                     /locus_tag="QGG16_04145"
     CDS             4088..4984
                     /locus_tag="QGG16_04145"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HJP24498.1"
                     /translation="MTDTILSSDTREVAIGFGRPFVMIGERINPTGRKLLAEEMKAGD
                     FSRVEADAIAQVEAGARMLDINAGIPLADEPALLARAIKLVQSVVDVPLSIDSSIIEA
                     LEAGIAVYQGKPLVNSVTGEDEVLERVLPLVARAGAAVVAISNDDTGISEDPDVRFAV
                     AKKIVERAADHGIPAADVVVDPLVMPIGAMGTAGQQVFTLVRRLREELKVNTTCGASN
                     VSFGLPNRHAVTGTFLAMATSHGMTSAIMSPLHAEVKTAIQAADVLAGADADCATWIR
                     HHRDPDALAGARERRGNRRRRA"
     gene            5017..7119
                     /locus_tag="QGG16_04150"
     CDS             5017..7119
                     /locus_tag="QGG16_04150"
                     /inference="COORDINATES: protein motif:HMM:NF025925.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASKHA domain-containing protein"
                     /protein_id="HJP24499.1"
                     /translation="MADPAGRPEKHLVVFTPSGLRGSVHGGTSVLDAARQLGVDLDSV
                     CGGRGICGRCQVMPTFGEFAKHGVTASPDHVSDRGPTEADYRGRRPLVDGQRLGCAAT
                     ICGDLVVDIPAESQVHRQVIRKEVDVGDLALDPVLVLRLVEVAEPTLDESIGEIRRLV
                     DSLATQWDLHGLAVANDLVADVQRALAAGNRTVTVAIRDGCQVVAVWPGLRDRALGIA
                     VDVGSTTIAGHLCDLATGAVLATAGTMNPQIRFGEDLMSRVSYVMMNPGSEVELTDAV
                     RSALDDLVGNLVGQVDATRDEVLELVLVGNPVMHHLFLGYDPTPLGGAPFALAVDGPL
                     DLPVSSLDIEAHPATRAHVLPCIAGHVGADTAAVVLSTGLGRTAELEAGDQPTPSPPD
                     RERVRLVVDVGTNAEIVLAGRGRVLAASSPTGPAFEGAQISAGQRATPGAIERVRIDP
                     TTGEPRFRIIGVEPWSDEDGFTEAAIGTGVTGICGSGIIEVVAELWLANLMDTNGVIG
                     GADTRPSTRIEPDGRTFSYVLFDPTEMGLDGERLLVTQNDIRAIQLAKAALYAGIRLL
                     MDHLEVDTVDEIGLAGAFGSHIDTTHATVLGLVPDCDPDRVTSVGNAAGAGATIALLS
                     GSARQSIVEVVDRIEKIETALEPAFQDHFVDAMAIPHRTAEYPCLSTRVTLPERSTAS
                     VVGSERSGRRRRRNGAAR"
     gene            7350..8951
                     /locus_tag="QGG16_04155"
     CDS             7350..8951
                     /locus_tag="QGG16_04155"
                     /inference="COORDINATES: protein motif:HMM:NF018012.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine methyltransferase family protein"
                     /protein_id="HJP24500.1"
                     /translation="MTDLNNEDDVAAASGTAEGFETPTRSARRSGGRAARQAARSEAT
                     AETRAYLTRTMAPFEVLSTEGLETIEHAADTILEEIGIDFRDYPTALTLMADAGADVE
                     GERVRFPRGMCRQIIQSSAPSAYTQHGRNPARNVQVGGDATVLVPAYGSPFVHDLDEG
                     RRYATIGDFQNFVKLAYLHPGMHHSGGTIVEPVDIPVSKRHLDMVYSHLKYSDKPFMG
                     SVTAAERAQDSIDLASFVFGTDFVQQNTVMTSLINASSPMSWDATMLGSAEAYARSNQ
                     ASVISPFILAGAMAPVTVAGVAVQTLAEALAGMTFVQLVNPGAPVVFGSFASSMSMQT
                     GAPTFGTPEPALVLYTVAALARRLGVPFRSGGNLCGSKLPDAQAASESMSTFIPSLMG
                     GVNFMLHSAGWLEGGLTMGYEKFIIDADQCNLAATFVKGVDLSDNGLAMDAIREVGPG
                     QHFLGTAHTLANFETAFARSDVANNDSFEQWEEDGSLDAAQRANGIWKKMLDSYEAPP
                     LDEAADEAMLDFMARRKEVIPDEFG"
     gene            9141..10838
                     /locus_tag="QGG16_04160"
     CDS             9141..10838
                     /locus_tag="QGG16_04160"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004329 - formate-tetrahydrofolate ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HJP24501.1"
                     /translation="MSFPSDLEIARGATLRPLTEIAAESGIPADCLEQYGEGAAKIKL
                     EAIGRMADRPKAKYVVVSAITPTPLGEGKTTTTVGLGQGFSHVGKKATIAIRQPSMGP
                     TFGIKGGAAGGGYSQVVPMELFNLHLTGDMHAVTAAHNMCSAMLDAHLFHGNELGLDM
                     HNITWRRVMDINERALRNIVVGLGGRLDGVPRETGFDITAASEVMAALALCTSLADLR
                     ARMGRIVVGYDKAGTPITAEDLGVAGSMTVILKEAIKPNLMQTLEGTPALVHCGPFGN
                     IATGNSSIIADQIGIHTGDYLLTEAGFGADMGAERFFNIKCRYSGIAPDAAVLVATVR
                     GLKAHSGNHKIVAGRPLPEALLAENPDEVHQGGDNLRKQLENMQVHGVSPVVAINVFP
                     GDHDADIAAIGEIADEFNARSAVTTHFADGGSGAAELAEAVAEAADEPSEFQVLYPDE
                     MSLRDKIRTVADKVYGADGVDFSPQANKQIDSYEANGFGNLPVCIAKTHLSISSNAAL
                     KGAPTGWTLPVREVRASVGAGFVYPICGDMRTMPGLGAQPGAMGIDIDEDGEIVGLS"
     gene            10939..11829
                     /locus_tag="QGG16_04165"
     CDS             10939..11829
                     /locus_tag="QGG16_04165"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF014296.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0006555 - methionine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HJP24502.1"
                     /translation="MATRPRTKRSRIIQPRTDRAIQRSLLEGMTYELIPLKNLADQSA
                     HLPDGATVSVTCSPAKTIDDTLDLCAGYAEKGFTVIPHFAARMVESENHVERIAERVN
                     AIGIRKVFCIGGDADPRGPFADAAGFLRSFLDRRPEIDVVGIGSYPDGHSTIPDQALA
                     DALVEKQELIREAGLEGYMATQMCFDAQTIGTWLAGQRAAGVDLPCHLGVPGAVDRTK
                     LLTISIRLGIGHSARYLKKNKTSVIRLLSPGGYNPNKLIAPLSGRAHELGIAGIHCFT
                     FNAVDTTENWRQKSLRKLAT"
     gene            11909..14101
                     /locus_tag="QGG16_04170"
     CDS             11909..14101
                     /locus_tag="QGG16_04170"
                     /inference="COORDINATES: protein motif:HMM:NF012927.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJP24503.1"
                     /translation="MPSDPTSTRNSHPLLLSPISVGPMDLRNRIVLPAMDQNICDNGL
                     ITDPLITHYAERARGGAGLLILETAAVAFPYGATARHQPALSHDGVIDGLRRLGEAVH
                     THGAKMVVQANHHGRISGVDTAEDRPSLVPSLPLPDADPMAIMRDTTMDELMAMATLT
                     GGKMPTYAEASADDLAWVVDQFADAAWRVQQAGLDGIEVHAGHGYLIDTFLSPAWNQR
                     TDGYGGCVEGRARLLLEVVRAVRSRCGMNFAVLVRLNGRDAALEGGITPDLAARYAAL
                     AADAGADAIHVTAYSSITGGTGFTEGPLPWLDCQYEDLARTVKTAVDVPVVAVGRIHP
                     DDGERIISDGGADLIAMGRQLLADPDLPKRLAGGRPELVRPCINCFVCVAQNFWNSAP
                     VCAVNARLGHQDEPEPTPAPTPGHVVVVGGGPGGMEAARVAAERGHRVTLLERSNHLG
                     GTARFSSLTTPLNGDLVRYLIAAITEAGVDVRTGTTVSPAMVAALRPDAVVVATGAIR
                     SRPDVPGAELPHVLSGDDLRSLLTGEGDLGVRRPGVAARAVLTTARLLGITSDIGRVR
                     SLSRRWMPLGSRVVVVGGGLVGTELAEFLAERGRTVTVLEEGTHLATEMAHPRRWRAL
                     HEARSRGVEFHTGTRLAAITPSDVVAEMTVEASDDRASRDEPEVLEQRFAADAVLLAG
                     GVEPERSLAEAIEAAVEDDVTVHMVGDAGTVGYIEGAIRTGYAVGCHL"
     gene            14216..15466
                     /locus_tag="QGG16_04175"
     CDS             14216..15466
                     /locus_tag="QGG16_04175"
                     /inference="COORDINATES: protein motif:HMM:NF012296.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HJP24504.1"
                     /translation="MSNPSVNEEAAPSWNPFDPEFLLDPYPTYTRLRDEDPVHRNPLG
                     ILIVSRYDDAHQVLRDPHTSVRRFESSADTPEHMQVLRNRGEERTPSILGLDPPDHTR
                     LRKLVQRTFTPRSIARMRERTTTIVDELLDNLSTRSRKGDDEIDLIADYAFVIPFAVI
                     HAMLGLPTADVERVRSWSHALTQTLEPYLTPEQVDAAVDGGTHMEAYLRDAIAWKRRE
                     PAEDLLTDLVQVEEEGDRMDEEELLAMTSLLFVAGHETTVNLIGNGTHALLRHPDQLA
                     QVRDDDSVDETLADELLRYDSPVQTSGRRMMHDVEIGGVEVPSGERVLTALGSANRDP
                     RFWGDTAAQLDVTRADANRHMSFGSGVHHCLGAALARMEGEIAVTRLVRRFPDLALAA
                     EPTYNARIILRGREAMPVALGQPA"
     gene            complement(15435..16877)
                     /locus_tag="QGG16_04180"
     CDS             complement(15435..16877)
                     /locus_tag="QGG16_04180"
                     /inference="COORDINATES: protein motif:HMM:TIGR00711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HJP24505.1"
                     /translation="MPTSSGSDGVGSTSHQTALVDRRAWVALSVATLAGLLTTIDISI
                     VNVAFPSMRRDLGATEASLSWVLSGYSIASGAFLMLAGRLADQKGRRRLFLIGVTVFV
                     VGSLLSGMADTTGWLIAARVVQGVGGSILGPASLAMILPAFSEKRRSMVIGIWGASAA
                     LGAALGPSIGAVLIDFASWRWIFFVNVPIGILILVLTPRFVRESSDPDARGGFDVVGV
                     PAGTLGIALVLLAVVEGERWGYLSARSVGSVLAGIALVVLLFVRSARHHNPLIDLSLI
                     RIRSFWSAGLGQIFFITAFIATILFHTLLLQELWGWSVLTAGFGVVPGPALAAVLGGP
                     VGTIVDRVGHRNVVVFGSLMAAINPLWLMSTVGPESSWATTLLPAQLFLGVAVSCSFA
                     TYSSLGLRDVLPARFATASAMLRTVGSIGFASGVAIAIAVFSSARHLDPLAAFNRVWT
                     FLFCTFLTGAAFCAVACPGRIRQADRGRPA"
     gene            complement(16959..17606)
                     /locus_tag="QGG16_04185"
     CDS             complement(16959..17606)
                     /locus_tag="QGG16_04185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24506.1"
                     /translation="MGEMVARVAVVVVGLVLFGVGIGVLFLADLGVGPWDVLHDALAG
                     LLDRQPGTVILGLGVVLLALLVGLRQPIGLATLANVAIVGTTVNVLLAVVDTPSAMAA
                     RLVLVATAPMVVAFGSMLYIGGGIGIGPRDGLMTALVDAGLSFRVARTLLEVTVLLVG
                     IVLGGRFGLGTVVFALTVGSALQFFRARVWAGYPESPGYVFRRAGSASPGQDADL"
     gene            complement(17798..18919)
                     /locus_tag="QGG16_04190"
     CDS             complement(17798..18919)
                     /locus_tag="QGG16_04190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJP24507.1"
                     /translation="MKKRLTTRLLAVLAVLTLFATACGDDEAAVGIGDCESVDSVSLQ
                     LQWLTQAQFAGYYAAADEGIYEKYCLDVEIREGGVDIAPHQQLASGAVDFAVSWVPKA
                     LVPREEGMDIVNVAQVFQRSGTLQVSWADAGIDGPADLAGKVVGNWGWGNEFELLAGS
                     RKAGLDPSSDYELVQQSFDMLALLNGEIDAAQAMIYNEYAQMLEATNPATGKRVTADD
                     LSIIDWNDEGTAMLNDAIWADGTRLGNADYADITTRFVAASLEGWMYCRDNSADCVEI
                     VLNNGSSLGASHQAWQMNEINGLIWPSPDGAGVMDEGLWAQTVDVATSQGILASAPDS
                     GAYTTQYAEAAVEMLKNRGVDTTGKNWRRVDVTLNPGGE"
     gene            complement(18919..>19378)
                     /locus_tag="QGG16_04195"
     CDS             complement(18919..>19378)
                     /locus_tag="QGG16_04195"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HJP24508.1"
                     /translation="WFGITATLSNQAVVVAVLFFPVFINTSRGLTEVHPDEIELMRSY
                     AASEWTILREVRIPNALPFFANSLRLVAPLSVIAAIVAEYFGGPQDRIGNVITSNVAF
                     VRYDVAWAAIAVASALGLTLFSVALLVERASMPWRAAMGDGEYTTTPGRE"
BASE COUNT         3567 a         6716 c         6098 g         2997 t
ORIGIN      
        1 ggtcgaccgg gaagatgaag ttcgacgcgt ggccagtcga acctccagga ttgggcaacg
       61 ggcccttttc cagcaggacc aggtcggtcc agccgaggcg ggccagatgg ccgacgagac
      121 agttaccgac aatgccggca ccgatcacga cgacattggc gcgagtcggg aaatcactca
      181 ttcggttgtt ctcctgcgac acggcccggg gcggctcgac cacgagggtg ggtccgaccg
      241 ggggcggttg atgggatgcc tgacagcggt cgccgcgagg cgccggaagc gtacctaccc
      301 cctccggatg atgctgacaa tcgggcgccg ctaaatcgtt cgtacctgac gtaccgtcag
      361 gacacccatc aggggagtaa cttccgcgcc cgagacagat gccatcggaa gggagtcgaa
      421 aggcccatgg ccgaaccaca ggcgaccaac ccaccggcga ccgaaccgcg gacaaccaga
      481 ccaccagcaa cggatccgca gcgcgtgctg atcaccgggg gtgcctcagg tataggacgg
      541 gccatggccg aggccttcag cgatgcgggt gcccgggtgc acgtggccga cctgcccgct
      601 tcccgaggcg gccaacccga gggttgtggc ttcagcggcg tggacgtctc cgatcccgcc
      661 ggagtagacg agcttttcgc cacagtgcta gccccggccg acgccggcgg tctgggcggg
      721 ctggacgtac tgtgcgccaa cgtgggtatc gccggcccca ccggaccgat cgaggacctc
      781 gacgccgagg gttgggatca gaccatggcc gtcaacgtgc gcagcgcctt cctctgctgc
      841 cgccgggccg tcccagccat gcgggccacc ggaggcggat cgatcctgtt gacctcgtcg
      901 accgcgggga tcaccggctt cccgatgcgt tcgccgtacg cagcatccaa gtacgccatc
      961 atcggactgg gcgacacgct ggccatggaa gtgggcgagt ttgggatccg agtgaacgtg
     1021 ctgtgtcccg gctcggtgga cggcgaccgg atggtgcggg tgatcgatgc cgaggcggcc
     1081 gccaccggtg aatcagccgc cgacctgcgg gccgcctacg agaagcaggt ctcgatgcgg
     1141 accttcgtcg aggggcggga catcgcggcc atggccgtgt ttctggcgtc gccggccgcc
     1201 cggttcgtca acggtcagac catctcggtg gacggtggcc tcgagacgct gcgaaccagc
     1261 tggagaacct gaagtcaggc cgctggtcct gcctccaccg gaaccggaat caagccacct
     1321 agccaagggc ggacgagatc tcgtcggctg cccaacgcac ccggtctgcc acgatgtctt
     1381 tcaacgtctt gtcggggaac cggtagctcg gtccgtgact gtgcagggca cccaccacgg
     1441 cgccgacctg gttgaacaac ggcgcggcca ccgagttgat gccctcggag aactcctcct
     1501 ccatccagaa gatcccagtc tcgcggacct cgtcgagacg ggctcggatc cggtccggca
     1561 tggtgaccga tctcggcgtg taccggtcga gattacggtt caggtagcgg tcaacggcct
     1621 catcgggcca gtgggcgagg acgaccatgc ccgaggggac aatgtgcatg ggcaggctga
     1681 cccccgtcca gtcccggacc tggacggggt tcgcgcagtc gatctgaccg atgtagtgga
     1741 cgtcgtatcc cgccgggatg gacagaccta ccgcctcggc caccaggtcg accagttcct
     1801 gcatggtcgg ctgagccacg gccaggaggc tttgggtcgt atccacactg gccgccatgg
     1861 tgaccaccga cgggccgatc cggtagccgc tgtcgtcagc cagtcgctca acggccccta
     1921 actgctcaag ggtggccagc agccgggcca ccgtgctcgt cggaagaccg agccgtcgtg
     1981 agatctcgct gatccccgac ggatcgtcag ccacctcggt caggatctgg aaggcccggt
     2041 cgatgctctg gacgatctgc atatgtctgc tcgcctctcc cccatgaacg ctgccatggg
     2101 tttcggcatt ccgttatctg ccctgccagg cgatccacca agcgacgtcc cacatagcgg
     2161 gaagcacatt ccggtgggtg gacaacccaa ctgagggtta gtagatttcc caccatacag
     2221 gatcttcccg cctagcggga aactgattat gagcacctca ggtagcgtga cgacattcca
     2281 caccgccccc cggggcagca acggctgacc acgggacgta aaacacgtcc cccgattcgc
     2341 aacggagcgc atccatggcc gaagagcaaa acatcgaaga agagatcatc ctggcggacc
     2401 tcagtgacga ggatctcaca gcccagatgc atgacgacct ctacgacggc ctcggcgacg
     2461 agatcagcga aggcaccaac atcctcctgg gtcgcggctg ggaccccggc cgagtcctga
     2521 acgacgccct ggtcgaaggc atgcggatcg tgggcatcga cttccgcgat ggcatcctct
     2581 tcgtacccga ggtactgctg tccgccaacg ccatgaaggc cggcatggcc atcctccggc
     2641 ccctgctggc cgagacaggc gctgagccca ttggcaaggt ggtgatcggt accgtcaagg
     2701 gcgacatcca cgacatcggc aagaacctgg tcgggatgat gctcgagggc gccggcttcg
     2761 aggtcatcga cctcggcatc aataccgacg tcgaggagtt cctcggggca ctcgacgagc
     2821 acaagcccga catcctcggc atgtcggccc tgctgacgac caccatgccg tacatgaagg
     2881 tcgtcatcga cacccttgag gagaagagcc tccgcgagga gtactcggtg atcgtcggtg
     2941 gtgccccgct gaacgaggag tttggcgagg ccatcggtgc cgacgcctac tgccgcgatg
     3001 ccgcggtggc tgccgagacg gcgagccgcc tggtgtccga acgccgggcc gcggccgcct
     3061 gacccggacg gtgaacgagc ccaccggtgc caccgaggca cccggcgggc gaactctcgt
     3121 cgtcgcctgt ggcgcactcg cccgcgagtt gctccaggtg gtggaggcca acggcctcac
     3181 ccatgtcgac gtcgagtgtc tgcccgcctc gtaccacaac acgccagacg tcatccccca
     3241 ggccgtcgcc acacgcgtcc gggccgccgc cgaccattac cagcggatct tcgtgggcta
     3301 cggcgactgt ggcaccggtg gtcgcctcga cgcggtgtgt accgaactgg gtatcgaccg
     3361 cctacccggc gaccactgct acgaattcct ggccggctca gcggccttca cggacctgca
     3421 cgccgaggag ctgggcacct tcttcctaac cgactacctg gtgaagcact tcgaccgtct
     3481 ggtggtgaag gccttctggc tagacaccca ccccgagatg ctcgaggcgg tgtttggcaa
     3541 ctaccgacgc ctcgcctatc tctcccaggt ggacgatccc gacctgctgg aacaggcgcg
     3601 ggccgcagct atccgactcg gactggcctt cgaacaccgc cccaccggtc tcggcaacct
     3661 ggagacccac ttgctggccg ggacctcggt ggccatcacc ggccccgcca ggtcacccct
     3721 tcccacagga gcccattgaa ctcatggccg cccagctcgt caccatctac tggcgtgaca
     3781 tccccgccca aatcaccgcc cagcagggac ggacccgcga gaaggccctg ctggatgccc
     3841 gcttccagca cgccatcgac cgggcggcca tgatcgccgg aatggacgac accgactcct
     3901 acgtggccca gtggcgccgg gaatcggtgt ccctcaccgc tgacatggcc gccgctgtgg
     3961 ctgacgaggc cgcccgcata gatgctgcct atgaccgtga ccgactcgag cgcctcgtgc
     4021 tctcgggtgg cgtcgacaac tgaaccatcc cgccagacat ggcacaagac agagggccat
     4081 caccaagatg actgacacca ttctcagctc ggacacccgt gaggtggcca tcggcttcgg
     4141 ccgaccgttc gtcatgatcg gcgagcgcat caaccccacg ggccgaaagc tcctcgccga
     4201 ggagatgaag gccggtgact tcagccgggt ggaggccgac gccattgccc aggtggaggc
     4261 aggcgcccgg atgctggaca tcaacgccgg catcccgctg gccgacgagc cggccctgct
     4321 agcccgggcc atcaagctgg tccagtcggt ggtcgacgtc ccgctctcca tcgactcctc
     4381 gatcatcgag gccctagagg ccggcatcgc cgtctaccag ggcaagccac tggtcaactc
     4441 ggtcaccggt gaggacgagg tgctcgaacg ggtcctaccg ctggtcgcgc gggcaggcgc
     4501 cgcggtagtg gcaatttcca acgacgacac cggcatctcc gaggaccccg acgtgcgttt
     4561 cgccgtggcg aagaagatcg ttgaacgggc cgccgaccac ggcatcccgg ccgccgacgt
     4621 ggtggtcgac cctctggtca tgcccatcgg cgccatgggg acagccggcc agcaggtgtt
     4681 caccctcgtg cggcgcctgc gcgaggaact gaaggtcaac accacgtgtg gcgcgtccaa
     4741 cgtgagcttc ggcctaccca accggcacgc ggtgaccggc acgttcctgg ccatggccac
     4801 cagtcacggc atgacctcgg ccatcatgag cccgctgcat gccgaggtga aaacggccat
     4861 ccaggccgcc gacgtgctgg ccggcgccga cgccgactgc gccacctgga tccgccacca
     4921 ccgtgacccg gacgcgctag ccggcgcccg cgaacgtcgc ggcaaccgcc gtcggcgcgc
     4981 ctgaggcccg gcgcccgacc caccagatac cagaccatgg ccgaccccgc tggacgcccc
     5041 gaaaagcatc tcgtcgtctt cacgccgtcc gggctacgcg ggtcggttca cggaggcacc
     5101 tcggtactgg acgccgcccg acaactgggc gtcgacctcg attcggtgtg cgggggccgc
     5161 ggcatctgcg gccgctgtca ggtgatgccc acgtttggtg agttcgccaa acacggagtt
     5221 accgccagcc cggaccacgt ctcggaccgg ggccccaccg aagccgacta ccggggccgg
     5281 cggcctctgg tcgatggcca acgcctaggt tgcgcggcca cgatctgcgg cgacctggtg
     5341 gtcgacatcc cagccgaaag tcaggtccac cgccaggtga tccgcaagga ggtcgacgtg
     5401 ggcgatctgg cactcgaccc ggttctggtc ctgcgtctcg tggaggtagc cgaacccaca
     5461 ctggacgagt cgatcggcga aatccggcgc cttgtcgact cactggccac ccagtgggac
     5521 ctccatggcc tggcggttgc caacgatctg gtggccgacg tgcagcgggc tctcgccgct
     5581 gggaaccgca cggtcaccgt ggccatccgg gacggttgtc aggtagtggc cgtctggccc
     5641 gggctccgtg accgggcgtt gggcatcgct gtggatgtcg gatcgacgac cattgccggc
     5701 cacctctgcg atctggccac gggggcagtg ctggccaccg ccgggaccat gaacccacag
     5761 atccgcttcg gcgaggacct gatgagccgg gtctcctacg tgatgatgaa cccgggcagt
     5821 gaggtcgaac tgaccgacgc ggtgcgctcc gcccttgatg acctcgtggg caacctcgtc
     5881 ggacaggtag atgccacacg tgacgaggtg ctggagctgg tgctggtagg taatccggtc
     5941 atgcaccacc tgttcctggg ttacgacccc acaccactgg gcggggctcc gttcgccctg
     6001 gccgtcgacg ggccgctcga cctaccggtg tcctccctgg acatcgaggc acacccggcg
     6061 acccgcgccc acgtgctgcc ttgcatcgcc ggccacgtgg gcgccgatac ggcagccgtc
     6121 gtcctgtcca ccggcctcgg ccggacagcc gaactagaag ccggcgacca gccgacccct
     6181 tcacctccgg accgcgagcg ggtccgactg gtggtcgacg tgggcaccaa cgccgagatc
     6241 gtgttggctg gccgtggacg ggtcctcgcc gcgtctagtc cgaccggccc ggccttcgag
     6301 ggcgcccaga tcagtgccgg ccagcgggcc acacctggcg ccattgaacg agtccggatt
     6361 gacccgacaa ccggtgagcc tcgctttcgc atcatcggcg ttgagccgtg gtccgacgag
     6421 gacggcttca ccgaggctgc aataggcacc ggggtgaccg gcatctgtgg ctccgggatc
     6481 atcgaggtgg tcgccgaact ctggctcgcc aacctcatgg acaccaacgg ggtgatcggc
     6541 ggggccgaca ccaggccgtc gacccgtatc gaacccgacg gtcggacctt ctcctacgtg
     6601 ctgttcgacc ccaccgagat gggcctcgac ggagagcgcc tactggtcac ccagaacgac
     6661 atccgggcca tccagttggc caaggcagcg ctgtacgccg gcatccggct gctcatggac
     6721 cacctcgagg tcgataccgt tgacgagatc ggtctggcgg gcgccttcgg cagtcacatc
     6781 gacaccaccc acgccaccgt gctgggcctg gtcccggact gcgatcccga ccgggtcacc
     6841 agcgtcggca acgctgcggg cgccggggcg accatcgccc ttttgtccgg ttcggcccgc
     6901 caatcgatcg tcgaggtggt cgaccgcatc gagaagatcg aaacggccct cgagccggcg
     6961 ttccaggacc acttcgtgga cgccatggcc atcccccatc ggaccgccga gtacccctgt
     7021 ctttcgacac gggtcacgct ccctgaacgg tctaccgctt cggtggttgg ttcggagcgc
     7081 tccggtcggc gacgtcgtcg caacggagcc gcaagatgag cagtcacaat cgatggttga
     7141 gaacatggtc aaggaccgtc ggtatgcctt tgggcgtaac cgacgatgac aaaccagagt
     7201 ttctgccaat aagccaaaca agcgtaaaac gggcactggg ttttcgcaca ttttggatag
     7261 tgatgcatgt cgtcacatgc ctttttatta tcgccgcggc ggggcggact ttaggaattt
     7321 ggtagcccat caatcgagga agacacccca tgaccgatct gaacaacgag gacgacgtgg
     7381 ccgcggccag cggcacggcc gaaggctttg agacgccaac ccgcagtgcc cgacgtagcg
     7441 gtggccgggc cgcccgccag gccgcccgtt ccgaggcgac ggccgagacc cgggcatacc
     7501 tcacccgcac catggcgccg ttcgaggtgc tgtcgaccga gggtctcgag accatcgagc
     7561 acgcggccga caccatcctc gaggagatcg ggatcgactt ccgcgactac ccgacggcgt
     7621 tgaccctcat ggccgacgcg ggagccgatg tggagggcga acgggtccgc tttcctcgcg
     7681 ggatgtgtcg ccagatcatc cagtcctcag ctccgtccgc ctacacccag cacggccgca
     7741 acccggcccg caacgtgcag gtgggggggg acgccacggt gctagttccc gcctacggct
     7801 ctccgttcgt ccacgacctc gacgaggggc gtcgctacgc caccatcggg gacttccaga
     7861 acttcgtgaa gctggcctac ctccacccgg ggatgcacca ctcaggcggg accatcgtcg
     7921 agccggtgga catcccggtg tccaaacggc atctagacat ggtgtattcg cacctgaagt
     7981 acagcgacaa gccgttcatg ggatcggtga cggctgccga gcgtgcccag gactccattg
     8041 acctggccag cttcgtgttc gggaccgact tcgtccagca gaacaccgtg atgacgagcc
     8101 tcatcaacgc ctcgtccccc atgtcatggg acgccaccat gctcgggtcc gccgaggcct
     8161 acgcccgatc caatcaagcc tcggtgatca gcccgttcat cctggccggg gccatggccc
     8221 cggtgaccgt ggcaggcgtt gccgtccaga ctctggccga ggcgttggcc ggcatgacgt
     8281 tcgtgcagct ggtcaacccg ggtgccccgg tggtcttcgg atcgttcgcc agttccatgt
     8341 cgatgcagac cggagccccg acgttcggaa cccccgagcc ggccctcgtg ctctacacag
     8401 tggccgctct ggcccgccgc ctcggagtgc ctttccgctc gggtggcaac ctctgcggct
     8461 ccaagctgcc cgatgcccag gcggccagcg agtcgatgtc gacgtttatc ccgtcgctga
     8521 tggggggcgt gaacttcatg ctccactcgg cgggctggtt ggagggaggc ctcaccatgg
     8581 gctacgaaaa gttcatcatc gacgctgacc agtgcaacct ggccgccacc ttcgtcaagg
     8641 gagtggacct gtccgacaac ggtctggcca tggacgccat ccgcgaggtc ggaccaggac
     8701 agcacttcct cggcaccgca cacaccctgg ccaacttcga aacagcgttc gcccggtccg
     8761 acgtggccaa caacgactcc ttcgagcagt gggaggaaga cggcagcctg gacgccgccc
     8821 agcgggccaa cggcatctgg aagaagatgc tggacagcta cgaggcacct ccactagacg
     8881 aggcggccga cgaagccatg ctcgacttca tggcccgccg caaggaggtc attcccgacg
     8941 agttcgggtg atcgaactcg tcacaccacc cagcacacga ttttcctctg gttggtggtt
     9001 ctttccaccc agtacacctg atcctcgcct ctggctacaa tccccgaggc tgtggacgac
     9061 cccctcgtcg tctaccccac cccagcacag atcttccctc acgaccccta agacaaccct
     9121 tgaaccggag aaccagaaca atgtcgttcc cctctgacct cgaaattgcc cgcggcgcca
     9181 ccctgcgtcc cctcaccgag atcgccgccg aatccggcat ccccgccgac tgcctcgagc
     9241 agtacggcga aggtgccgcc aagatcaagc tcgaagccat cggtcggatg gccgaccgcc
     9301 ccaaagccaa gtacgtggtg gtctcagcca tcactcccac accgctcggc gagggcaaga
     9361 ccacaaccac cgtcggcctt ggccagggct tcagccacgt cggcaagaag gccacgatcg
     9421 ccatccgcca gccttcgatg ggcccgacct tcggaatcaa aggtggcgca gcaggtggcg
     9481 gctacagcca ggtcgtgccg atggaactgt tcaacctcca cctgaccggc gacatgcatg
     9541 cggtcaccgc ggcccacaac atgtgctcgg ccatgcttga cgcccacctg ttccacggaa
     9601 acgaactggg cctggacatg cacaacatca cgtggcgacg ggtcatggac atcaacgaac
     9661 gggcccttcg caacatcgtg gtcggtctcg gtggccgcct cgacggcgtg ccccgcgaga
     9721 caggctttga catcaccgct gcatcggagg tcatggccgc cctggcgctg tgcacctcgc
     9781 tggccgacct gcgggcccgc atgggccgca tcgtcgtggg ctacgacaag gccggcaccc
     9841 cgatcactgc cgaagacctc ggcgtggccg gctccatgac ggtcatcctc aaggaggcca
     9901 tcaagccaaa cctcatgcag accctcgagg gcaccccagc gctcgtgcac tgcggcccat
     9961 tcggcaacat cgccaccggc aactcttcga tcatcgccga ccagatcggc atccacaccg
    10021 gtgactacct cctcaccgag gctggcttcg gcgccgacat gggcgcagag cgcttcttca
    10081 acatcaagtg tcgctactcg ggcatcgccc cggacgcggc cgtactagta gccaccgtgc
    10141 gaggcctcaa ggcccactcc ggcaaccaca agatcgtggc cgggcgaccc ctgcccgagg
    10201 ctttgctggc cgagaacccc gacgaggtcc accagggcgg tgacaacctt cgcaagcaac
    10261 tggagaacat gcaggtccac ggagtgtccc cggtggtggc cataaacgtg tttcccggtg
    10321 accacgacgc agacatcgcc gccatcggtg agatcgccga cgagttcaat gcccgctcgg
    10381 cagtgaccac ccacttcgcc gacggcggct caggggctgc cgagttggcc gaggcagtag
    10441 ccgaggcggc tgacgagccc agcgagttcc aggtgctcta ccccgacgaa atgtcgctgc
    10501 gggacaaaat ccggacggtg gccgacaagg tgtacggcgc cgacggcgtg gacttctcgc
    10561 cgcaagccaa caaacagatc gactcgtacg aggccaacgg cttcgggaac ctgccggtgt
    10621 gcattgccaa gacccacctc tcaatcagct ccaacgcggc gctaaagggc gccccgaccg
    10681 gctggacgct tcccgtccgc gaagtccggg cctcggtggg cgcagggttc gtgtacccga
    10741 tctgcggcga catgcgtacg atgcccggac tcggcgcgca gccgggggcc atggggatcg
    10801 acatcgacga ggacggcgag atcgtcggcc tcagctaagc cccggcagta ccagcaatac
    10861 cggcgtcagc cggaaccagg tccagatcag cagcgggcgg cctcagccgt ccccggagtt
    10921 gcacaggagg gcgggagcgt ggccacccga ccccggacta aacggtccag aatcatccag
    10981 cccagaactg accgggccat tcagcgatcc ctgctcgagg gaatgaccta tgagctcatc
    11041 cctctgaaga atctggccga ccagagcgcc cacctaccgg acggggcaac cgtgtcggtg
    11101 acctgctcgc cggccaagac catcgacgac accctcgatc tgtgcgccgg gtacgccgag
    11161 aagggcttca ccgtcatccc gcacttcgct gcccggatgg tcgagagtga gaaccacgtc
    11221 gaacggatcg ccgaacgggt gaacgccatc ggcatccgga aggtcttctg catcggtggc
    11281 gacgccgacc cgcgcggacc cttcgccgac gccgccggct tcctccggtc gttcctggac
    11341 cgccggcccg agatcgacgt ggtgggcatc ggctcctacc ccgacggtca ttccaccatt
    11401 ccggatcagg ccctcgccga tgctctcgtc gagaagcaag aactgatccg cgaggctggg
    11461 ctggagggct acatggcaac ccagatgtgc ttcgacgccc agaccatcgg aacctggctg
    11521 gccggtcagc gggcggccgg tgtggacctg ccgtgccatc tcggcgtacc gggagccgtg
    11581 gaccgcacca agctgttgac catctcgatc cgtctgggca tcggccactc ggcccggtac
    11641 ctgaagaaga acaagacgtc ggtcatccgg ctgctgtcac ccggtggcta caaccccaac
    11701 aagctcatcg ccccgctgtc gggtcgggcc cacgagttgg gcatcgccgg catccactgc
    11761 ttcaccttca acgcggtgga caccacggag aactggcggc agaagtccct gaggaagctc
    11821 gccacctgag tacgccggcc cgtgtcagcg ggcctggaag ggttgatgcg gttggcccgg
    11881 cggcccatcc tcgggcagga tccctgacgt gccgtcagat cccacctcca cccgaaactc
    11941 ccacccgctg ctgttatccc cgatcagcgt ggggccaatg gacctgcgga accggatcgt
    12001 ccttccagct atggaccaga acatctgcga taacggactg atcactgatc cgctgatcac
    12061 ccactacgcc gaacgggccc ggggcggcgc cgggctcctc atcttggaga cagcggcggt
    12121 tgcctttccc tacggggcca cggcacgcca ccaaccggca ctgtcccacg atggggtgat
    12181 cgacggactg cggcgcctcg gagaggccgt ccacacccac ggggcgaaga tggtcgtgca
    12241 ggccaaccac cacggccgga tctccggggt cgacaccgcc gaggaccgac ccagcctcgt
    12301 gcccagcctc ccgcttcccg acgccgatcc catggccatc atgcgcgaca ccacgatgga
    12361 cgagttgatg gccatggcca ccttgaccgg cgggaagatg cccacctatg ccgaggcatc
    12421 ggccgacgac ctggcatggg tggtggacca gttcgccgat gccgcgtggc gcgtccaaca
    12481 ggccggcctg gacggcatcg aggtccatgc gggccatggc tacctgatcg acaccttcct
    12541 ctcgccggcc tggaaccagc gcaccgatgg gtacggcggg tgtgtcgagg gtcgggcccg
    12601 actgctcctc gaagtggtaa gggccgtgcg gagccggtgc gggatgaact tcgccgtgct
    12661 tgtccgtctc aatggtcgcg atgccgccct cgagggaggc atcacccctg atctggcagc
    12721 ccgctacgcg gcgttggccg ccgacgccgg cgccgacgcc atccacgtca ctgcctactc
    12781 gtcgatcacc ggcgggaccg ggttcaccga gggcccgttg ccgtggctgg actgccaata
    12841 cgaggacctg gcccgcaccg tgaagacagc cgtcgacgtg ccggtcgttg ccgtgggacg
    12901 gatccaccct gatgacggcg agcggatcat cagcgacggt ggggccgacc tgatcgccat
    12961 gggtcgccag ttgctggccg accccgacct gcccaaacgg ctggccgggg ggcgcccgga
    13021 actcgtccgt ccgtgcatca actgcttcgt gtgcgtggcc cagaacttct ggaactcggc
    13081 ccccgtctgc gcggtgaacg cccggttggg ccatcaggac gaacccgagc cgaccccggc
    13141 gcctaccccc ggccacgtag tggtggtggg cggcggtccg ggcggcatgg aggccgctcg
    13201 ggtggccgcc gagcggggtc accgagtgac cctgctggaa cgatccaacc atctgggtgg
    13261 tacggcccga ttctcgtcgc tcaccacccc actcaacgga gacctggtcc gctacttgat
    13321 cgctgccatc accgaggccg gcgtggacgt ccggaccggc accaccgtgt cgccggccat
    13381 ggtcgctgcg ctccgacccg acgccgtcgt ggttgccacc ggcgcgatcc gaagtcggcc
    13441 cgacgtgccc ggtgcggagc taccccatgt gctgtccggc gacgacctcc gaagcctgtt
    13501 gaccggcgag ggtgacctcg gggtccgccg ccccggcgtg gcggcgcgtg ccgtgctcac
    13561 cactgctcga ctgctgggca tcacctctga cataggacgt gtccgctcgc tgtcacgccg
    13621 ctggatgccg ttaggtagcc gggtggtcgt ggtgggcggt ggcctggtcg gtactgaact
    13681 ggccgagttc ctggccgagc gaggccggac ggtcacggtg cttgaagaag gcactcacct
    13741 ggccaccgag atggcccacc cgcgacggtg gcgggccctc cacgaggccc ggtcccgggg
    13801 cgtggagttc cacaccggca cccgtctggc ggccatcacg ccgagcgacg tggtggccga
    13861 gatgaccgtc gaagcctccg atgacagagc ctccagagat gagcccgagg tccttgagca
    13921 gcgattcgcg gccgacgccg tcctgctggc cggtggggtg gaacccgagc ggtcgctggc
    13981 cgaagccatc gaggctgcgg tggaagacga cgtgaccgtc cacatggtgg gcgacgccgg
    14041 cacggtgggc tacatcgagg gcgccatccg caccggctac gccgtcggtt gccacctgta
    14101 ggcccgtagc caccggcttc cagctagccg agtttcgggg gtgccgccgg catgccccct
    14161 gcgaaagcaa gccccggttc gggccgggaa cgcacccgtc ggtagcgtct ggaccatgag
    14221 caacccatcg gtcaacgagg aggccgcccc ttcgtggaac ccgttcgacc ccgagttcct
    14281 cctcgacccg taccccacct acacccggct ccgtgacgag gatcccgtcc accggaaccc
    14341 actgggcatc ctcatcgtca gccgttacga cgacgcccac caggtgctgc gcgaccccca
    14401 cacctctgta cgccgcttcg agtcgtcggc cgacacgccg gagcacatgc aagtgcttcg
    14461 caaccggggc gaggagcgca ccccctcgat cctcggactc gacccgccag accacacccg
    14521 actgcgaaag ttggtccagc gcacgttcac cccacggtcg atcgcccgga tgcgcgaacg
    14581 aaccaccacc atcgtcgacg aactgctcga caacctctca acccgctctc gtaagggcga
    14641 cgacgagatt gacctgatcg ccgactacgc cttcgtcatc ccgttcgccg tcatccacgc
    14701 catgctcggt ctccccaccg ccgacgtaga acgggtccgg tcgtggtccc acgccctcac
    14761 ccagaccctc gagccgtacc tcacccccga acaggtcgac gcggcagttg acggcggcac
    14821 ccacatggag gcctacctac gcgacgccat tgcatggaag cgccgtgagc ccgccgagga
    14881 cctccttacc gacctggtcc aggttgagga ggaaggtgac cggatggacg aggaggagtt
    14941 gctggccatg acctcgctgc tgttcgtggc cggtcacgag accacagtga acctcatcgg
    15001 gaacggtacc cacgccctgc tgcgccatcc cgaccaactg gcccaggttc gcgacgacga
    15061 ctcggttgac gagaccctgg ccgacgagct gctgcgctat gacagcccgg tccagacctc
    15121 ggggcgacgg atgatgcacg acgtggagat cggcggcgtc gaggtgccgt caggcgaaag
    15181 ggtgctgacc gctctgggca gcgccaaccg ggatccccgg ttctggggcg acacggccgc
    15241 ccagttggac gtaacccggg ccgatgccaa ccggcacatg tcgttcggca gtggggtaca
    15301 ccactgtctg ggcgccgcgc tggcacgcat ggaaggcgag atcgccgtga cccgtctggt
    15361 gcggcgcttc cccgacctgg cgctggccgc cgagccgacc tacaacgccc ggatcatcct
    15421 ccggggtcgc gaggctatgc cggtcgccct cggtcagcct gcctgatcct tccgggacac
    15481 gccacggcgc aaaacgcggc gccggtcagg aacgtgcaga acaggaaagt ccagacccgg
    15541 ttgaaagcag ccagtgggtc gaggtggcgg gctgacgaaa acacggctat ggctatggcg
    15601 actcccgagg caaagccgat cgaccccacg gtccggagca tggcgctggc cgtggcgaac
    15661 cgggccggca gcacgtcgcg caggccgagc gaggagtagg tggcgaacga gcaggagacg
    15721 gccaccccga ggaagagttg cgccggtagg agggtggtgg cccaggacga ctccggaccg
    15781 accgtcgaca tcagccagag cggattgatg gcggccatca gagagccgaa gaccacgacg
    15841 tttcggtggc ccacccgatc cacgatcgtc cccaccggcc cgccgaggac ggcggccaac
    15901 gccgggcccg gcaccacgcc gaagccagca gttagcaccg accatcccca cagttcctgt
    15961 agtagcaggg tgtggaacaa gatggtggcg ataaacgccg tgatgaagaa gatctgaccg
    16021 agcccggccg accagaacga tcggatccgg atcagcgaaa ggtcgatcag cgggttgtga
    16081 tggcgggccg agcgcacgaa gagcaggacg acgagcgcga ttcccgccag gaccgagccc
    16141 accgagcggg ccgacaggta accccatcgc tcgccctcca ccacggccag gagcacaagg
    16201 gctatgccca aagttccagc cggcacgccc accacgtcga aaccgccccg ggcatcagga
    16261 tccgatgact cgcggacgaa ccggggggtg agcaccagga tcaggatccc aatgggcacg
    16321 ttgacgaaga agatccaacg ccatgaggcg aagtcgatga gcaccgctcc aatggatggc
    16381 ccgagcgccg ccccgagggc cgccgacgca ccccagatcc cgatgaccat ggaccgtcgc
    16441 ttctctgaga aggcgggaag gatcatggct agcgacgccg gaccgaggat cgagccaccc
    16501 acgccctgca ccacccgtgc ggcgatcagc cacccggtcg tgtcggccat tcccgatagc
    16561 agagaaccga cgacgaaaac cgtgaccccg atcaagaaga ggcgacgacg acccttctgg
    16621 tcggctagtc ggccggccag catgaggaac gccccagagg cgatcgagta gcccgacagg
    16681 acccacgaca ggctggcctc tgttgcccct aggtctcgtc gcatcgatgg gaaggccacg
    16741 ttcacgatcg agatgtcgat ggtggtgagc aggccggcca gcgtggccac gctcagggcg
    16801 acccatgccc gccggtcgac cagcgccgtc tggtggctgg tcgacccaac gccgtctgac
    16861 ccgctgctcg ttggcacgat ttcctccacg cctggcctac ccgcccggta agcggaagga
    16921 gccgctccga ctggcggtgc tccctgacga tgacgacgct agaggtcggc gtcctggccg
    16981 ggcgaagcgg acccagcacg gcgaaagaca tacccgggcg actcggggta tccagcccag
    17041 actctggcgc ggaagaactg cagagcagaa ccgaccgtca aggcaaacac cacggttccc
    17101 agcccgaacc ggcctccgag gacgatgccg accaacagca ccgtgacctc cagcagcgtc
    17161 cgggcgacac ggaagctcaa ccctgcatcg accagcgccg tcatcaggcc gtcacgaggc
    17221 ccgataccga tgccaccacc gatatagagc atcgagccga aggccaccac catcggagca
    17281 gtggccacca acaccagacg ggccgccatg gccgacggcg tatccacaac agccagcagc
    17341 acatttaccg tcgtgccaac gatggccacg ttggccaacg tggccaagcc aatcggttgg
    17401 cgaagcccaa ccaacaaagc gagcagcacc acccccagcc cgagaatgac cgtgcccggt
    17461 tgacgatcga gcagaccggc caaagcatcg tgcaggacgt cccatggccc gacaccaagg
    17521 tcagctagga acaggacgcc gatcccaacg ccaaacagaa ccaggcccac gacgactacc
    17581 gcaaccctgg cgaccatctc tcccatcagg tcattctctc gccctcacca tgtgacgagc
    17641 ccgacgaggg ggctggtcat cagtcatgag acgagcctga cggagtcggg tatacgtccg
    17701 gagccgggtg acccaaccga atgatgtcgg tcaggccacc cggagcaccc gggagttggg
    17761 gcaagcggga cagagacgcc gccgcccctc cggacagcta ctcgccgccc gggttgagtg
    17821 tcacatccac tcgacgccag ttcttgccgg tggtgtccac accgcggttc ttcaacatct
    17881 ctacggccgc ctcggcgtac tgcgttgtgt acgcgccgga gtcgggcgct gaagcgagaa
    17941 tgccttggct agttgccacg tcgacggtct gggcccacaa gccctcgtcc atcacgccgg
    18001 ccccgtcggg cgatggccag atcaggccat tgatctcgtt catctgccaa gcctgatgtg
    18061 atgcgccaag cgacgagccg ttgttgagca cgatttcgac gcaatccgct gaattgtcgc
    18121 ggcagtacat ccaaccctca agagaggcag ccacaaagcg ggtggtgatg tcggcgtagt
    18181 cagcgttgcc gagtcgggtg ccgtcggccc agatggcgtc attgagcatc gccgtccctt
    18241 cgtcgttcca gtcgatgatc gagaggtcgt ccgcggtgac acgcttgccg gtcgccgggt
    18301 tagttgcttc aagcatctgg gcgtactcgt tgtagatcat tgcctgagca gcgtcgatct
    18361 ccccgttgag caaggcgagc atgtcgaaac tctgctggac caactcgtaa tcgctggatg
    18421 gatcgagacc tgctttgcgc gagccggcta ggagctcgaa ctcgttgccc cagccccagt
    18481 tgccgacgac tttgccagcc aggtccgcgg gaccgtcgat gccagcgtca gcccacgaga
    18541 cctgcagggt ccccgagcgc tggaatacct gggccacgtt tacgatgtcc atgccctcct
    18601 cacgcggtac tagggccttg ggtacccatg acacggcgaa atccacagct cctgaagcca
    18661 actgctgatg gggagcgatg tcgacaccgc cttcgcggat ctccacgtcg aggcagtact
    18721 tctcgtagat cccctcgtca gccgccgcgt agtaacccgc gaactgggcc tgggtaagcc
    18781 actgcagttg tagcgaaaca gagtcaactg attcgcagtc gccaataccg accgcagctt
    18841 cgtcatcgcc acaagcagta gcaaacaacg ttagaactgc cagcaccgcc agcagtctcg
    18901 tcgtcaatcg cttcttcatc attccctccc gggtgtagtt gtgtactcac catcgcccat
    18961 cgccgctcgc caaggcatgc ttgcgcgctc aactagtagg gccacagaga acaaagttag
    19021 gccaagagcc gaggcgactg cgatggcggc ccaagcaacg tcgtatctca cgaatgcgac
    19081 gttcgatgtg atcacgttgc cgatgcggtc ctgggggccg ccaaagtact cggccacgat
    19141 cgcggcgatt accgacaggg gcgccaccaa ccggagagag ttggcgaaga acggaagagc
    19201 attgggaatt cgaacctccc gaaggatcgt ccactcgctc gccgcatagg aacgcatgag
    19261 ctcaatctca tcgggatgca cttcggtgag gcctcgagac gtgttgatga aaaccgggaa
    19321 gaagagcacg gcgactacta cggcctggtt gctgagcgtg gcggtgatcc cgaaccaa
//
LOCUS       DASCMR010000164         1603 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000807776, whole genome shotgun sequence.
ACCESSION   DASCMR010000164 DASCMR010000000
VERSION     DASCMR010000164.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1603)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1603)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000807776"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..583)
                     /locus_tag="QGG16_04200"
     CDS             complement(<1..583)
                     /locus_tag="QGG16_04200"
                     /inference="COORDINATES: protein motif:HMM:NF013168.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]
                     imidazole-4-carboxamide isomerase"
                     /protein_id="HJP24509.1"
                     /translation="MRTPALFPAIDLRAGRCVRLMQGDYDRETVYGDDPVAQALAFQE
                     AGADWVHVVDLDAARTGDPVNRPAVAAVAAALDVPVQAGGGVRSVADARELFDAGVSR
                     VVLGTAAVENPDLVTAVADRGPVAVGLDVWGDEVAVRGWTESSGVKLSDALIRYSDLG
                     TAAFVITRIERDGTLEGPDVDGLAGALAATSVDV"
     gene            complement(580..1248)
                     /gene="hisH"
                     /locus_tag="QGG16_04205"
     CDS             complement(580..1248)
                     /gene="hisH"
                     /locus_tag="QGG16_04205"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020376913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HJP24510.1"
                     /translation="MTRPDGDGSPARTGPLLAVLDYGIGNLRSAQKALQKVGADARLT
                     SDPDEVAAADGLVLPGVGAFGRCIEALRTAGLWETAMQAASEAATGDGRPFLGVCVGL
                     QMLHEASVESPGVAGLGVLPGEVTLLSDAVKRPQMQWNRLDQKGIDKHPMLAGLGDDP
                     WTYFVHSYAAPVGPDTVATCTYGDQVCAAEARNLLWACQFHPEKSSVTGLRVLENFVS
                     LVAR"
     gene            complement(1245..>1603)
                     /locus_tag="QGG16_04210"
     CDS             complement(1245..>1603)
                     /locus_tag="QGG16_04210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase"
                     /protein_id="HJP24511.1"
                     /translation="FADALGDKAGVRRFASIRVPLDEALVDVALDLSGRPYLHHDVEF
                     PGEKILGDPPFDPQLMEEFWRAFTVAARITLHLTVVRGKNTHHIVEASFKGVARALRD
                     AVRIDGGDVPSTKGSL"
BASE COUNT          274 a          577 c          505 g          247 t
ORIGIN      
        1 ccacatcgac gctcgtggca gctaatgcgc cggccagtcc gtcgacatca gggccttcca
       61 gcgtcccgtc acgttcgatc cgggtgatga cgaaggcggc ggtgcccaag tcggaatatc
      121 ggatcaacgc gtcgctgagc ttcacaccac tgctctcggt ccagccccgg acggccacct
      181 cgtcgcccca cacgtcgagc cccacggcca ccgggccgcg atcagccacc gctgtcacaa
      241 ggtccgggtt ctcgaccgcg gcggtgccca ggaccacccg agacaccccc gcatcgaaca
      301 gctcccgagc gtcagcgacc gaacggactc ccccgccggc ctgtacgggc acgtcaagag
      361 cggcggccac cgcggcgact gccggacggt tcaccgggtc gccggtccgg gcggcgtcga
      421 ggtccaccac gtggacccag tcggcgcccg cctcctggaa ggccagggcc tgggcgacgg
      481 gatcatcgcc gtacacggtc tcccggtcgt agtcgccctg catgaggcgc acacagcgac
      541 cagcacgtag gtcgatggct gggaacagcg cgggtgtcct catctggcaa ccaggctcac
      601 aaagttctcc agtactcgca ggcctgtgac cgaggacttc tccgggtgga actggcacgc
      661 ccagagcagg ttccgagctt cggccgcaca gacctgatcg ccgtaggtgc acgtggccac
      721 cgtgtcgggt ccgaccggtg cggcataact gtgtacaaag taggtccacg ggtcgtcacc
      781 caggccggcc agcatcggat gcttgtcgat acccttctgg tccagacggt tccactgcat
      841 ctgcggccgc ttgacggcat cggatagcag tgtcacctcg ccgggcagca cgccgagacc
      901 ggccacgccg ggtgactcga cactcgcctc gtggagcatc tggagcccca cacagactcc
      961 taggaacggt cgtccgtccc ctgtagctgc ctcgctggcc gcttgcatcg ccgtctccca
     1021 gagacccgca gtccgcagtg cctcaatgca acgtccaaac gcccctacgc caggaagaac
     1081 tagtccgtca gccgccgcga cctcgtcggg gtcgctggtc aggcgggcgt cggcacccac
     1141 cttttggaga gccttctggg ctgaccgcag gttgccgatt ccgtagtcca ggacggccag
     1201 tagcgggccc gtccgtgccg gggagccgtc cccgtcgggt cgggtcacag gctgcccttg
     1261 gtggacggca cgtcgccacc atcgatccgc acggcatcgc gcagggctcg ggccacgccc
     1321 ttaaaggagg cctccacgat gtggtgggtg ttctttccgc gcaccaccgt gaggtgcaaa
     1381 gtgatgcggg ccgccaccgt gaatgcccgc cagaactcct ccatgagctg tgggtcgaac
     1441 ggcgggtcgc cgaggatctt ctcaccggga aactcgacat cgtggtgtag gtacggacgc
     1501 cccgacaggt cgagggccac gtcgaccaac gcctcatcga gcggcacccg gatcgaggcg
     1561 aagcgcctca cacccgcctt gtcgcccaac gcatcagcaa agg
//
LOCUS       DASCMR010000165         2655 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000814588, whole genome shotgun sequence.
ACCESSION   DASCMR010000165 DASCMR010000000
VERSION     DASCMR010000165.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2655)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2655)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2655
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000814588"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(105..1538)
                     /locus_tag="QGG16_04215"
     CDS             complement(105..1538)
                     /locus_tag="QGG16_04215"
                     /inference="COORDINATES: protein motif:HMM:NF014443.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium transporter TrkG"
                     /protein_id="HJP24512.1"
                     /translation="MTAGLIDLLGDGDDTTALLIVGGAAGLLAAVIAVWVRPPDRVRD
                     ADVLCAFTGSLVLFIGMVAGLFLLVDPASGFADALFRAGTSATTTAMEAYPVEPTEHA
                     ERFLLGGAQWLGGIGALLLAVAVLPFFGAGREFADRSRRGGRRPMAPDPATAVRHLVI
                     VHGLASGFTLIGFLLVGIAPLDAVLLAMATASTGGLVSSPDLESAAAQWVAVIGMAVA
                     GTSLVVLWRLGVGRVRSLLRSTELQVYLGLLIIGSALFLLWTDGSGVDWVRRAAFTVT
                     AAVTTTGFPSTPGGNWAPAAPVLLLGLVSIGPMTGSVGGGFQILRHRILARVAIRELL
                     RQLHPRAVIPARLGGRIAAENTLARVVVTQFLFVSVLFVTAAVVASAGLELATALGAG
                     IHAISTAGPVRTLDGTLVDVGAWPAGVRLALLPAMVVGRLSVYPAIVALGAGTTLIRD
                     RVRFRRRLTASLSRSPGGRRHPPGTDQ"
     gene            complement(1675..>2655)
                     /locus_tag="QGG16_04220"
     CDS             complement(1675..>2655)
                     /locus_tag="QGG16_04220"
                     /inference="COORDINATES: protein motif:HMM:NF014325.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA C-terminal domain-containing protein"
                     /protein_id="HJP24513.1"
                     /translation="VLEFDEMAGGEVVVLTARLPGAAPLVGKSLRELGRELEPDWGFI
                     VGSITRRDNGEEMERTAVPRGDWTLREGDLITVVCKKDNLDDVTTRMGMESQRSDRVL
                     LLGGGRTAELLAESLLAQGRSVGIIEMDKARADYLAENLDRALVYHGDITDAVLLDEA
                     EVARQDVVVALTGEDHANVLACLYAKSASDSTGGRRDQQTETIAVVHRLKLLDLLEAH
                     QVDATISPRTATANSVLRFVRGEGDTVAAVSTSLHGDAEVLEFAVSPGCKCDGKKISD
                     LGLHEDVLIGAIVRDGKAQIARGRSTLRPRDHVIAVVRPGQAAHLSSLFG"
BASE COUNT          539 a          901 c          833 g          382 t
ORIGIN      
        1 cgttgccacg gccatgccag cagccacgaa caagatcgcc ataccggcaa cgctggccgt
       61 ggtgctcgcc caacggtcac cgaacgggaa gcggcggaat gggctcattg gtcggtaccc
      121 ggagggtgcc ggcggccacc aggcgagcgg ctcagactgg cagtcagacg tcgtcggaaa
      181 cggacccgat cacggatcag agtcgtaccg gcgccaaggg ccactattgc cgggtacaca
      241 gacaggcgtc ccaccaccat ggcgggcagg agggctagtc ggacgccggc cggccaggcg
      301 ccgacatcta ccaaggtgcc atctaatgtc cgaaccggtc cggccgtcga gatggcatgg
      361 attccagcac cgagagcggt ggccagttcc aagcccgccg aggccaccac tgcagcggtc
      421 acgaagagca cgctaacgaa gagaaactgc gtcactacga cacgggccag tgtgttctcc
      481 gcggcgatcc ggccgcccag ccgggccgga atgacagctc gcgggtggag ttgtcgaagc
      541 agttcccgga tggctacccg agcaagaatc cggtgccgga ggatctggaa gccgccgccg
      601 accgaaccgg tcatcggccc gatcgagacg aggccgagca gcaacaccgg cgcagccggc
      661 gcccagttgc cgcccggagt cgacgggaac ccggtggtgg taactgcggc ggtcacagtg
      721 aaggcggcgc gtcgcaccca atcaacgccc gacccgtcgg tccacaacaa gaacagggcg
      781 gagccgatga tcaggagacc cagataaacc tgaagttcgg tggaacggag aagagaacgg
      841 actcggccaa caccaagccg ccacagaacc acaaggcttg tgccggcaac agccataccg
      901 atcacggcta cccactgcgc cgccgccgac tcgaggtccg ggctgctcac gagtccgccg
      961 gtggatgcgg tggccatcgc caggagtacg gcatccaacg gtgctatccc gaccagcagg
     1021 aagccgatca gggtaaatcc agacgccaga ccatggacga tgactaaatg gcgcaccgcc
     1081 gtggcagggt cgggggccat gggacgtcga ccgcctcgac gtgatcggtc ggcaaactcc
     1141 cgccctgctc cgaagaaagg caacacagcg accgctagca ggagtgcgcc gatacccccc
     1201 agccactggg cgcctccgag cagaaatcgc tcggcatgtt ccgtcggttc gaccgggtag
     1261 gcctccatag ctgtagtggt tgccgacgtg ccggccctaa acagggcgtc cgcaaagccg
     1321 ctcgccgggt cgaccagcag gaagaggccg gcaaccatcc cgatgaagag caccaggctg
     1381 cccgtgaagg cgcacaggac gtcggcatca cggacccgat ccggtggacg gacccatacg
     1441 gcgatcaccg ccgccagaag tcctgcggca cctccgacga ttagaagggc tgtcgtgtcg
     1501 tcgccgtcgc cgagcagatc aatcaacccg gccgtcacgg caagcaggaa agtggcaccc
     1561 aatgctgcgg cgatcgacca cgcagcggcg gcggcccacg aaggccaggg cgcacgtccg
     1621 ccgctccgtg gcctgatatc agatcccacc ggacgattca tccggaccgc cgacctagcc
     1681 gaacagcgag gagaggtggg cagcctgccc tggacggacc acggcgatca catggtcgcg
     1741 tggcctcagt gtgctccgtc ccctcgcgat ctgggccttc ccgtcgcgca cgatggcgcc
     1801 gatcagcacg tcctcatgaa gcccgaggtc agaaatcttc ttgccgtcgc acttgcatcc
     1861 cggggacacg gcgaactcca ggacctcggc gtcaccgtgg agggacgttg agacggcagc
     1921 cactgtgtct ccctcacccc gcacaaaccg gaggacactg ttggcagtgg ccgtccgcgg
     1981 gctgatagtg gcgtccacct gatgtgcctc gagaagatcc agcaacttca gtcggtgcac
     2041 cacggcgatg gtctcagttt gctggtctcg tcgaccaccg gtggaatcgc tagccgattt
     2101 ggcgtacagg caggccaaca cattggcgtg gtcctccccg gtcagggcaa ccaccacatc
     2161 ttgacgggcg acctcggcct cgtcgagcag gacggcgtca gtgatgtctc cgtggtacac
     2221 cagagctcgg tccaggttct ccgccagata atcggcccgg gccttatcca tttcgatgat
     2281 gccaaccgac cggccctggg caagcaatga ctctgccagc aactcggcag ttcgaccgcc
     2341 gcccagaagg agtacgcggt ccgagcgttg gctttccatg cccatccggg tcgtcacgtc
     2401 gtcgaggttg tccttcttgc aaacgacggt gatgagatcc ccctcccgaa gggtccagtc
     2461 tccacgggga acggccgtcc gttccatctc ctcaccgttg tcccggcgag tgatcgaacc
     2521 cacgatgaaa ccccagtcgg gctccaactc ccggcccagt tcccgtagcg acttgcccac
     2581 caatggggct gctccgggga ggcgagcggt aagtaccacg acctcgccgc cggccatctc
     2641 gtcgaattcc aacac
//
LOCUS       DASCMR010000166         6542 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000815192, whole genome shotgun sequence.
ACCESSION   DASCMR010000166 DASCMR010000000
VERSION     DASCMR010000166.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 6542)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6542)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6542
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000815192"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(33..1946)
                     /locus_tag="QGG16_04225"
     CDS             complement(33..1946)
                     /locus_tag="QGG16_04225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014344862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_except=(pos:complement(1707..1709),aa:Sec)
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HJP24514.1"
                     /translation="MSKRLTTPMVRDDGVLREATWEEALQRAATGFRAAVDTHGPTAF
                     GMFSCSKTTNEVNYAAQRFARRVIGSNNIDSCNRTUHAPSVVGLATVFGAGGGTSSYV
                     EIEEADLIIMWGSNARNAHPIFFHHALRGVANGARMWSVDPRRTGTAKFADHWLGLNV
                     GTDIGLANGVAREIIAAGLTNDEFIANATTGYEEFVAFVEPWTLEHTSAVTGVPAEAI
                     RDLAHAYATADKAQICWTLGITEHHTGVDNVQSLCNLSLLTGHVGRWGSGLVPLRGQN
                     NVQGGGDMGALPNKLTGFQDVEDDDARGKFEEAWDCTIPSTNGWNLTQMFEAMGRDEL
                     KAVYCIGENPVDSEADAIHARAMLERLDMLVVQDVFMTRTAEMADVVFPAALGWAESD
                     GTATNSERRVQRMRAAVPPPGQARQEVGIINDLAAAMGDDQWGQPAPEDLWEELRTVS
                     PMHGGMSWDRLEAEGGIQWPCPTDDHPGSPFLHGRLWERPVQGRLAPFSRVEDRPPLD
                     VLTEEFPLRLTTVRALDSYNTGVQTEHFPSPIRTGEALSISTTDADLLGVTDGERVTV
                     SSRRGSITMTIEVEEHLAVGLCHTTFHFPETTDINQITSDAVDPKSGTADFKAAAVRV
                     DKLVDGPLVGNNA"
     gene            complement(2075..2869)
                     /locus_tag="QGG16_04230"
     CDS             complement(2075..2869)
                     /locus_tag="QGG16_04230"
                     /inference="COORDINATES: protein motif:HMM:NF012596.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HJP24515.1"
                     /translation="MSEETASPIRTTVDGPILDVVLDRPKANAIDAATSRELGRVFAG
                     FRDDPSLRVAVFTGVGERFFSAGWDLTAAADGEAFEADYGEGGFGGFCELPGRNKPVV
                     CAVNGMAVGGGFEIAMAAEFVVAAEHATFFLPETGLGIIPDAGAIRLPRQLPAVVANE
                     VLYGGRRLDAAEAERWGLVNRVVPVDELSAAARELAGRIAAAAPLAVEAVMAIDQATG
                     HRSLNEAFGHLRSGQLEAYERMLTSEDALEGPRAFTEQRDPYWQGC"
     gene            complement(2866..4986)
                     /locus_tag="QGG16_04235"
     CDS             complement(2866..4986)
                     /locus_tag="QGG16_04235"
                     /inference="COORDINATES: protein motif:HMM:NF024938.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HJP24516.1"
                     /translation="MGGESRLTRLLAPRSVAMIGGRPAELAIEQCRRLGYEGEMWAVH
                     PTRADLAGVSCVPSVDDLPGVPDAALVAVNRYATVEVVGRLAAIGAGAAVCYASGFAE
                     IGPDGTALQEALVAAADGMPVLGPNCYGTVAATVGAALWPDQQGCRRADRGVALVTQS
                     GNIGLDLTLQTRPMPIAHMLTLGNQADVGIEECLEALVGDPAVTAVGLHVEALHDVPR
                     FVAACQLASRRGVPVVALKTGSSTRGAEIAASHTSSMVGSDEAYQALFCRTGVRRVRS
                     VPELLDTLHVLDRLGGLPGNRIVSLSCSGGEASIVADRCEGLDLSLPGFDGARVDRIR
                     TALGDPQKAALVSVSNPFDYHTFIWGDAERLLATFTEAVTREPDGAPDAALLVLDFPP
                     EDSTSDLDASSWWPTLEAFGAACMATGTPGVVAASMAENLPLTVEASAADIGLVPVRG
                     IDEALVGLEAAAWWGRRVDGPSLAPLPARTTAPSGRVGGTWATLLEAEAKAVLAGHGV
                     PVPPGEVVGVEEAAAAADRMGWPVVVKAVGVAHKTEVDGVAVGLTDAAEVTGAARRIG
                     LATGADRVLVEAQIDGPVGGPVELLVTVRRADPVGWLLTVGAGGTLVEVLADTRNLLL
                     PAADDDIRRALQALAIRPLLDGHRGRPGVDLDAVVDVIQRIGAAALAVEGLVEVEVNP
                     LMATAEGATVVDVLMQVEDPEEQS"
     gene            complement(5012..6172)
                     /locus_tag="QGG16_04240"
     CDS             complement(5012..6172)
                     /locus_tag="QGG16_04240"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP24517.1"
                     /translation="MDFALTDEQEMVVDTVRAFTERELVPHEEEVERLGDVRPELVVQ
                     IRDRALDAGIYAANMPADLGGGGLDNLTMALVDRAFGWTQYALHYVVARPSNILQACV
                     GDQIEEYLLPTIRGERVDCLAMSEPDAGSDVRGMTCRAVRDGDDYVINGTKHFISHAD
                     LADYTILFAATGEEETPRGPKKLITSFLVDHDTPGLEIADGYRSVSNRGYHNCILSFD
                     DCRVPASAVLGEEHRGFEVANEWLGATRLQVASVCLGRADRAMAVALDWAASREQFGQ
                     KIGKFQGVSFKLADMRTRMVQAELMTYRAAWLMDRGEMADGDAAMAKISSTEMLQFVS
                     DEAIQILGGMGLMDELPLERIWRDARVDRIWDGTSEIQRHIVSREMLRPLGA"
     gene            complement(6221..>6542)
                     /locus_tag="QGG16_04245"
     CDS             complement(6221..>6542)
                     /locus_tag="QGG16_04245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24518.1"
                     /translation="TFFTVETHLNYVKEASLGEPLRFTTQVLGVDSKRLHFFHAMYLV
                     DEAGAVGDLLCTTEQMLLHVNTETGSTAPILDGPAAALAAVARVHADLPVPPQVGRVM
                     RIPA"
BASE COUNT         1103 a         2321 c         2054 g         1064 t
ORIGIN      
        1 cggtcggctc ctcggtcgcc ccgaagtaca ggtcaggcat tgtttcctac caacggacca
       61 tccacgagct tgtcaacccg gacggcagct gccttgaaat ctgcggtccc ggacttcgga
      121 tcaacggcat cgctggtgat ctggttgatg tcggtggtct ccgggaagtg gaaggtggtg
      181 tggcagaggc ctaccgccag atgctcctcc acctcaatgg tcatggtgat cgatccccgg
      241 cgggacgaca cggtgacccg ctcgccgtcg gtcaccccga ggaggtcggc gtcggtcgtc
      301 gagatggaca gcgcctcacc ggttcggatg ggcgacggga agtgctcggt ctgtaccccg
      361 gtgttgtacg agtccagcgc ccgcactgtg gtgagccgta gggggaactc ttcggtcagc
      421 acgtccaatg gcggtcggtc ttcgacacgc gagaacggag ccaaccgacc ctgcaccggt
      481 cgctcccaga ggcggccgtg caggaacggg ctccccggat ggtcgtcggt gggacatggc
      541 cactggatgc caccctcggc ctccagacga tcccacgaca taccgccgtg catgggtgac
      601 accgtgcgga gttcctccca gagatcctcc ggcgcgggtt gaccccactg gtcgtcgccc
      661 atagcggccg ccaggtcgtt gataatgccg acctcctggc gggcctgccc gggtggcggc
      721 acggcagccc gcatccgctg gacccgtcgc tcactgttgg tggccgtccc gtcggactca
      781 gcccatccca gggcagccgg gaacaccacg tcggccattt cggcggttcg ggtcatgaag
      841 acgtcctgga cgaccagcat gtcgagtcgc tccaacatgg cccgggcgtg gatggcatcg
      901 gcctcggaat caacaggatt ctcaccaatg cagtagacgg ccttgagttc gtcacgaccc
      961 atggcctcga acatctgggt gagattccag ccgttggtcg acggaatggt gcagtcccac
     1021 gcctcctcga actttccccg ggcatcgtcg tcctcgacat cctggaaccc ggtgagcttg
     1081 ttgggcagcg cgcccatgtc gccgccaccc tgcacgttgt tctgcccgcg caggggtacg
     1141 agccccgatc cccaacgccc gacgtgaccg gtgagaagcg acagattgca gagggactgc
     1201 acgttgtcga cgccggtgtg gtgctcggtg atccccagcg tccagcagat ctgggccttg
     1261 tcggctgtgg cgtatgcatg agctaggtcg cggattgcct cggctggtac gccggtgacc
     1321 gccgaggtgt gctccagggt ccacggttcg acgaaggcca cgaactcctc gtagccggtg
     1381 gtggcgttgg cgatgaattc gtcgttggtg aggcccgcag cgatgatctc gcgggccacg
     1441 ccgttggcca ggccaatgtc ggtgccgacg ttgaggccca gccagtggtc ggcgaacttg
     1501 gcagtgccgg tgcggcgcgg gtcgacggac cacatgcgcg caccgttggc cacaccacgt
     1561 agggcgtgat gaaagaagat cgggtgtgcg ttacgtgcgt tggatcccca catgatgatg
     1621 aggtccgctt cctcgatttc cacatacgag gaggttcccc cgcctgctcc gaagaccgtc
     1681 gccagaccga cgacgctggg agcgtgtcaa gttcgattac agctgtcgat gttgttcgag
     1741 ccgatgaccc gacgggcgaa ccgctgcgcg gcgtagttca cctcgttggt ggtcttcgaa
     1801 caactgaaca tcccgaaggc cgtcgggccg tgggtgtcga ccgcagcgcg aaacccggtg
     1861 gcggcccgct ggagggcctc ctcccaggtg gcctcgcgga ggacgccatc gtcccggacc
     1921 atcggggtcg tcagacgctt gctcatgtat tcctcattac tggtcagtga ccggacaccg
     1981 tcgtccgatc ggagcgaacg ggccacagag ggtccgcccg acggggccgg aacctatcgc
     2041 acttccgtgc ccttcagagt ttcctgtcag tagatcaaca tccctgccag taggggtccc
     2101 tctgctcggt gaaagccctc ggtccctcca gggcatcctc agaggtcaac atcctctcgt
     2161 aggcctcgag ttgacccgac cgcagatgcc cgaacgcctc gttcagtgac cggtggcccg
     2221 tggcctggtc gatggccatc acggcctcca cggccaacgg ggccgctgct gcgatccgcc
     2281 cggccagctc ccgagccgcg gcggacaact cgtcgaccgg caccactcgg ttgaccagac
     2341 cccaccgttc cgcctcggcg gcatccaggc gcctaccgcc gtagagcacc tcgttggcca
     2401 ccaccgccgg caattgacgt ggcagtcgga tagcgcccgc gtcggggatg attcccagac
     2461 cggtctcggg caggaagaaa gtcgcgtgct cggcggccac cacgaactcg gcggccatgg
     2521 cgatctcgaa accgcctccg acggccatgc cgttcaccgc acagaccacc ggtttgttcc
     2581 gacccggaag ttcacagaac cccccgaaac ctccctcgcc gtagtcagct tcgaacgcct
     2641 ccccgtcggc cgccgccgtc aggtcccaac cagccgagaa gaaccgttca ccgacaccgg
     2701 taaacacggc cacccgcaat gacgggtcgt cacggaaccc cgcgaacact cggcccagct
     2761 cacggctagt cgccgcatcg atggcgttgg ccttcggacg gtccaacacc acgtcgagga
     2821 tcggaccatc gaccgtcgtc cggatcgggc tcgccgtctc ttcactcatg actgctcctc
     2881 ggggtcctcg acctgcatca agacgtccac caccgtggca ccttccgcgg tggccatcaa
     2941 cgggttgact tccacctcga ccaatccctc cacggcaaga gcggccgccc cgatccgttg
     3001 gattacgtcg accactgcat ccagatcgac ccccggtcga ccccgatggc cgtccagcaa
     3061 cggacggatg gccaacgcct ggagtgccct ccggatgtca tcatcggcgg ccggcagtaa
     3121 caggtttcgg gtgtcagcca gcacctcgac gagggtgccc ccggccccca cggtgaggag
     3181 ccaccccacc gggtcggccc gtcggacggt gaccagcaac tcgacgggcc cgccaactgg
     3241 cccgtctatc tgcgcctcga ccagcactcg gtcagccccg gtggccagcc cgatccgccg
     3301 ggccgcacca gtcacctcgg ccgcgtctgt caacccgacg gccacgccgt cgacctcggt
     3361 cttgtgggct acgccaaccg ccttgacgac caccggccag cccatccggt cggccgccgc
     3421 ggcggcctcc tcgaccccca ccacctcacc aggcgggacc ggcactccgt gcccggccag
     3481 caccgccttg gcctcggcct ccaacaaggt cgcccaggta cccccgaccc ggcccgacgg
     3541 cgctgtcgtt ctcgccggca ggggcgccag cgacgggccg tccaccctcc gcccccacca
     3601 ggcggcggcc tccaacccga ccagtgcctc atcgatgccc cggaccggca caagaccgat
     3661 gtcggccgct gaggcctcca ccgtcaatgg aaggttctcg gccatcgatg cagccaccac
     3721 gccgggggtc ccggtcgcca tgcacgcggc accgaacgcc tcaagcgtcg gccaccaact
     3781 agaggcgtcg aggtccgacg ttgagtcctc cggcgggaag tccaggacta ggagggcggc
     3841 gtccggcgct ccgtctggtt cgcgggtgac cgcctcggtg aacgtggcca gcaagcgttc
     3901 cgcatcgccc caaatgaacg tgtggtagtc gaacgggttg gagactgaaa ctagggctgc
     3961 tttctggggg tcaccaaggg ccgtccggat ccgatctacc cgagcaccgt cgaacccggg
     4021 tagcgagagg tcaagtccct cgcaacggtc agccacgatg gaagcctcgc cacccgagca
     4081 actcaggctg acgatcctgt tccccggtag acccccaagc cggtccagta cgtgcaacgt
     4141 gtcgagcagc tcaggcacgg accggacccg acgcactccc gtccggcaga aaagggcctg
     4201 ataggcctcg tcgctgccca ccatcgacga agtgtgcgac gcggcgatct cggcgccacg
     4261 ggtcgaggac cccgtcttga gcgccaccac cggcacgccc cgtcttgagg ccagctggca
     4321 ggcagccacg aatcggggca cgtcgtggag ggcctcgacg tgcaggccca ccgcggtgac
     4381 cgccggatcg cctaccagcg cctcgaggca ttcctcgata cccacatcgg cctgattccc
     4441 cagcgtcaac atgtgggcaa tgggcatggg tcgggtctgc agggtcaggt ccaggcctat
     4501 gttcccgctc tgggtcacca gcgccacgcc ccgatcggcc cgacgacagc cctgctggtc
     4561 gggccacagc gcggcgccga cggtggccgc caccgtcccg tagcagttgg ggcccagtac
     4621 gggcattcca tcggccgccg ccaccagggc ctcctgcaaa gccgtgccgt cgggtccgat
     4681 ctccgcgaaa cccgaggcgt aacagaccgc cgcgccggca ccgatggcag ccagacgtcc
     4741 tacaacctcg acagtggcgt accggttcac ggccaccaat gccgcgtcgg gcacccccgg
     4801 aagatcatca accgagggca cgcacgacac cccggccaga tcggcccgcg tcggatgtac
     4861 cgcccacatc tcgccctcgt accccaggcg acggcactgt tcgatggcca gctccgctgg
     4921 tcggcctccg atcatggcca ccgatcgggg tgcaagcagg cgggtcaggc gggattcccc
     4981 gcccacgtcg gtcaccttcg agatccccgg atcaggcgcc gagggggcgc aacatctcgc
     5041 ggctcacgat atggcgctgg atctcgctcg tcccgtccca gatccggtcc acccgggcat
     5101 cgcgccagat ccgctccaac ggcagctcgt ccatcaggcc catcccgccg aggatctgga
     5161 tggcctcgtc ggacacgaac tggagcatct cggtcgacga gatcttggcc atggcggcgt
     5221 cgccgtcagc catctcccct cgatccatca gccatgccgc ccggtaggtc attagctcgg
     5281 cctggaccat ccgggtccgc atgtcggcca acttgaacga gacgccctgg aactttccga
     5341 tcttctggcc aaactgctcg cgtgatgccg cccagtccag ggctacggcc attgcccggt
     5401 ccgcccggcc caggcacacc gaggccacct gcaggcgagt ggcgcccagc cactcgttgg
     5461 ccacctcaaa accccggtgt tcctcgccca gcacggccga cgccggcacc cggcagtcat
     5521 cgaagctcag gatgcagttg tggtagccgc ggttggacac cgaccggtaa ccatcggcta
     5581 tctccaggcc cggcgtgtcg tggtccacca ggaacgacgt gatcaacttc ttggggcccc
     5641 gaggggtctc ctcctcgccg gtcgccgcaa agaggattgt gtagtcggct aggtcggcgt
     5701 ggctgatgaa gtgcttggtc ccgttaatga cgtagtcgtc cccgtcgcgc accgcccggc
     5761 acgtcatgcc ccgcacgtcg gacccggcat cgggctcgct catggccaga cagtcgaccc
     5821 gctcgccacg gatggtgggt agcaggtact cctcgatctg gtcacccacg cacgcctgga
     5881 ggatgttgga cggccgggcc accacgtagt gcagcgcgta ctgggtccag ccgaatgccc
     5941 gatccacgag tgccatggtg aggttgtcga ggccacctcc gccaaggtcg gccggcatgt
     6001 tggccgcgta gatcccggca tccagggccc gatcgcggat ctggacgacg agttccggcc
     6061 gaacgtcgcc gagacgctcg acctcctcct cgtggggtac caactcgcgc tcggtgaagg
     6121 ctcggacggt gtcgaccacc atctcctgtt catcggtcag ggcgaagtcc atgggggctc
     6181 cctacgcagc ggggtcggac ggttcttgtc ggatcggggg tcaggcgggg atccgcataa
     6241 cgcgacccac ctggggcgga acgggcaggt cggcgtggac tctggcaacg gcagccaagg
     6301 cggcggcggg accatcgagg atgggtgccg tcgaaccggt ctcggtgttg acgtgtagca
     6361 gcatctgttc ggtcgtgcac aacaggtcgc cgacggcccc agcctcatcc accagataca
     6421 tcgcgtggaa gaaatgcagc cgcttggaat ccacaccgag tacctgagtg gtgaatcgca
     6481 acggttcgcc gagcgacgcc tccttcacgt agttgagatg ggtctccacg gtgaagaagg
     6541 ta
//
LOCUS       DASCMR010000167         2752 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000816258, whole genome shotgun sequence.
ACCESSION   DASCMR010000167 DASCMR010000000
VERSION     DASCMR010000167.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2752)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2752)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2752
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000816258"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..223
                     /locus_tag="QGG16_04250"
     CDS             <1..223
                     /locus_tag="QGG16_04250"
                     /inference="COORDINATES: protein motif:HMM:NF036456.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF5318 family protein"
                     /protein_id="HJP24519.1"
                     /translation="PTSEICPVCEDYEVAHVTYVFGPRLPAFGRCISTPGELERLDAR
                     KAHLTGYVVEVCAACGWNHLVRVTSLGRG"
     gene            503..859
                     /gene="rpsF"
                     /locus_tag="QGG16_04255"
     CDS             503..859
                     /gene="rpsF"
                     /locus_tag="QGG16_04255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HJP24520.1"
                     /translation="MRVYELMIIFDGDLEAEALEASLSKVTANIESEGGRIASLKDSE
                     PWGRRRFAYRINHKWEGVYVVLDVVTDAGNLDSTDRILRLADRSEVVRHKIIRLPDAE
                     VARRGLLGEAEPAEAG"
     gene            876..1307
                     /gene="ssb"
                     /locus_tag="QGG16_04260"
     CDS             876..1307
                     /gene="ssb"
                     /locus_tag="QGG16_04260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HJP24521.1"
                     /translation="MAFDNTVTIVGNVTRDPELRFTPSGAPVCNFGVAWNMKSKTGED
                     SVSFFDVACWRDLAENVAESITKGMRVVIYGRLDQRSWESQEGERRSKVELVADEVAP
                     SLRWATAEVTRTEFRGDGGSGAPTGGGGKTAPTHPTDEEPF"
     gene            1307..1561
                     /gene="rpsR"
                     /locus_tag="QGG16_04265"
                     /pseudo
     CDS             1307..1561
                     /gene="rpsR"
                     /locus_tag="QGG16_04265"
                     /inference="COORDINATES: protein motif:HMM:TIGR00165.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
     gene            1771..2217
                     /gene="rplI"
                     /locus_tag="QGG16_04270"
     CDS             1771..2217
                     /gene="rplI"
                     /locus_tag="QGG16_04270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HJP24522.1"
                     /translation="MKVLLRSDVDGLGRTGDIVDVARGYARNYLVPKGLAIEAVAGVT
                     AQAESMRRKRALKAASDRAEAEATAARIAGVVVQVTAKASDEGRLFGSVGTVEVAEAL
                     TAQVGLEVDRRQLAGEVIKEVGSYEFTVALYSDVAVPVTVEVQAEV"
BASE COUNT          472 a          871 c          932 g          477 t
ORIGIN      
        1 gcccacctcg gagatctgtc cggtgtgcga ggactatgag gtggcgcacg tgacctacgt
       61 tttcgggccc cggctgccgg ccttcgggcg gtgtatctcc accccgggcg agttggaacg
      121 gttggatgcc cggaaggccc acctcaccgg gtacgtggtc gaggtctgtg cggcctgtgg
      181 gtggaatcat ctggtgcggg tcacttcctt gggccgcggc tgagccccct cggttttctg
      241 gcagcagcgg ctgcgtgaaa cccgtcactc accacgacgc ggccggaccc tgtctagaag
      301 cccgcgccag aagccctgtc acaggcccct gccatgatgt ctgcgtggat gcgaaccgaa
      361 ggccggtaac ctgctctcgc ccttgtggat gccggtcaac tggtgtccac ggaggctctg
      421 acaacccgtt acccctgccc caccgtgggg ccccgggcac gccgtgggcg atgtccgaga
      481 ccagaggagg tgagtccccg ccatgcgggt atacgaactc atgatcatct tcgacggaga
      541 cctcgaggct gaagccttgg aggccagcct ttcgaaggtc accgcaaaca tcgaatctga
      601 gggtggacgc atcgcgtccc tcaaggattc cgaaccctgg ggccgtcggc gatttgccta
      661 ccggatcaac cacaagtggg agggcgtcta cgtcgtcctc gacgtggtga ccgatgcggg
      721 caacctggac tccacggatc gcatcctcag actcgcggac cgcagtgaag tggtccgtca
      781 caagatcatt cgcctgcccg atgcggaggt cgcacgacgc ggcctcttgg gtgaggcgga
      841 gccggctgag gccggttgag caccggagag aacaaatggc attcgacaac actgtgacca
      901 tcgtgggcaa tgtgacccgt gatcccgaac tccggttcac tccgagcggc gcccccgtgt
      961 gcaacttcgg cgtggcctgg aatatgaagt ccaagaccgg ggaggacagc gtctccttct
     1021 tcgacgtcgc ctgctggcgt gacctggctg agaacgtggc cgagtccatc accaagggca
     1081 tgcgcgtcgt catctacggg cgactcgatc agcgctcctg ggaatcccag gagggagagc
     1141 gtcgctcgaa ggtggaactg gtagccgatg aggtggcccc tagcctccgg tgggcgactg
     1201 ccgaggtgac cagaaccgag ttccgcggcg acggtggatc cggcgccccg acgggtggtg
     1261 gtggcaagac cgctcccacc catccgaccg atgaggagcc tttctgatgg cacgtcgtac
     1321 ccctccccgc cgatccaagc cccgcgatgc gggcaggcgg ggcaagaaga agatcagcgc
     1381 actcgtcatc ggcaagatcg agtacgtcga ttacaaagac accgagcttc tcaagaagtt
     1441 cgtatcggag cggtcaaagc tcaaggcacg tcggatcacc ggcaacaccg agcagcagca
     1501 gcgtgaggtc gcccgggcgg tcaagaacgc ccgtgagatg gcactgattc cctatgccaa
     1561 ccgcgtcacg acccagcgtc gtgagcgtcg taatgacgac cggggtgccc gggccgatgg
     1621 tccgccgccg cgtccgtcag gtccgccgcc cggctcggat gacgaggccg gtaccgacga
     1681 gaccgttgag gcgattgacg aggtggttgc cgtcgagacg ctcgacgatg cggtcgaggc
     1741 cgcgtcggcg gtagacgagg agacccagtc gtgaaggttc tcctgcgttc cgacgtggat
     1801 ggtctgggcc ggaccggcga cattgtcgac gtggctcgcg gctatgcacg caactacctg
     1861 gtgcccaagg gcctggccat tgaggccgtg gccggtgtga ccgcgcaggc cgagtccatg
     1921 cggcgcaagc gtgcgctcaa ggcagcgtca gaccgggccg aggctgaggc aactgccgct
     1981 cggatcgccg gcgtggtggt tcaggtgacc gccaaggcct ctgatgaggg ccgtttgttc
     2041 ggttcggttg gcactgtcga ggtggctgag gctctgaccg cgcaggtcgg gctcgaagtc
     2101 gatcggcggc agctcgccgg tgaggtaatc aaggaggtgg gctcgtatga gttcaccgtt
     2161 gccctctata gcgacgtggc cgttccggtc accgtcgagg tgcaggccga ggtctgatcc
     2221 cccggttatg acgaacgtcg gccggtccgg ggagaaggct cggaccggcc agacggtcgt
     2281 ccacagaaag gcccgggttt tccccggtga gttacggcgc gatggggaga agttcggtgc
     2341 ttttccttct ggttccccac agggcatcgc gtgcatgctt gtccccatgg gtggggtggc
     2401 gatcggcagc gtggcgtgaa cgctccgtcg tctgaaattc cggagccctc ggaacgcccg
     2461 gaagaagcgc cggaccagtc gccggatgcg actgatctac agtccgatcc cctcgtggcg
     2521 tcgcctaccc tcgaaccgcc gccggccctc ggtgagccgc cgcccatcga acccccggag
     2581 tacgacgagc caccgcgctg ggagccctcc tcggcgggat cctggagtgg atcgcgatct
     2641 ggagaccagt cccagaatcg tcgagccagc ggatcgttgg cctcgcgtgt tccaccacac
     2701 aacctcgatg ccgaggcttc cctcttgggg gccatgctcc tctcgcgcga cg
//
LOCUS       DASCMR010000168         3077 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000824765, whole genome shotgun sequence.
ACCESSION   DASCMR010000168 DASCMR010000000
VERSION     DASCMR010000168.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3077)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3077)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3077
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000824765"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(142..1095)
                     /locus_tag="QGG16_04275"
     CDS             complement(142..1095)
                     /locus_tag="QGG16_04275"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP24523.1"
                     /translation="MPKILAIRLTRLVVTVIVVSFVTFVGTNVLPGDPVNALIPIDAQ
                     QDREFVEQIREEWGLNDPMIVRYGRWLGDAVQGDLGRSLVTGQPVTDEITHRLPITLE
                     LMAVAVGFSLLIAVPLGAFTGYREGRRSDRVVSGFAQAGLSLPVFVTGLILIYVFALR
                     LQWFPAVGWNRLSDGLGPNLKSVALPALSLAVTEIAVYTRVLRSDMIATLKEDYILSA
                     RAKGLTDRFILFRHGLRPSLLTLVTVVGLNIGFLIGGSLVIEYLFAIPGLGKRLFSAI
                     QQRDFMMVQAITVLITVFYVIVNTATDLVYMVVDPRIRRTN"
     gene            complement(1275..>3077)
                     /locus_tag="QGG16_04280"
     CDS             complement(1275..>3077)
                     /locus_tag="QGG16_04280"
                     /inference="COORDINATES: protein motif:HMM:NF012706.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJP24524.1"
                     /translation="GGTLVIDRAGVREHLNSVTDYSGIIGLITCDAFGDCGSQKITVI
                     GHGDSGDIAASNANVVYEYAPGGSSLGEGNLVVPAAKPQYGGTVVVGLEAEAVGLRPW
                     EDACASSCYTMLGQMFDPLLRQAKSGEYLPWLAESISANDDFTVWTVTLRSGVTFHNG
                     KALSAQTLEDMWPIQQAGSSAAGAIATAGLINVEATGDLTVDYTLGATNVAFPSFLNG
                     APIGYPFDPEAAADSDAFNANPIGTGPFVMDSRDIDNETVLVRNPNYWLSINGRQLPY
                     LDGVSYRPIPDETTRLAALAAGTTSAMESRRQATVRDARSLEGVVLYEFQGNDAGGGH
                     FNAQVPPYDDVRVRRGLTLANNQEAVIEALGGAGISSPVTQFFSVDSPWWSQAVADSY
                     PHFDFDAGIALLQEYVDDPSRSDGKAAGEKIHVDLACPMDPTLVAAMSVLDQLWTATG
                     LVDVDVDTGNDQQTHINVSLGIANGFLGDHGAHCWRYGSEADPSVPIGQAFNNWQANP
                     LNFSNYDNAEIQGYLADALVTNDFAERYALYEKIGIIANRDVPHWFSGGTATVIAVEE
                     GITGLDTWVLPDGTLGIGHPSAVGRWEQVWRTDN"
BASE COUNT          609 a          956 c          958 g          554 t
ORIGIN      
        1 cggcatcttc ccgaacaagt tcccgaaccg acttttccgg gacgaacccg ggaacatctg
       61 ctcggcgttc cttggccccc gccggagtgt cgacgggacc cgggtctgga ccggtaccgg
      121 tggcaggccg agcttggaca cttagttcgt cctccgtatc cgggggtcaa cgaccatgta
      181 gacgaggtcg gtggccgtgt tgacaatcac gtagaagacg gtaatgagga ctgtgatggc
      241 ttggaccatc atgaagtcac gttgttggat cgccgaaaat agacgctttc caaggcccgg
      301 aatggcgaac aggtactcga tgacgagcga cccgccgatc aagaatccga tgttcaggcc
      361 gaccaccgtg acgagcgtga ggaggctggg tcggagaccg tgccggaaga gaataaaccg
      421 gtcggtcagc cccttcgctc gcgctgaaag gatgtagtcc tccttgaggg tggcgatcat
      481 gtcggatcga aggacccgcg tatagacagc gatctctgtg acggccaacg acagtgcagg
      541 gagggccaca ctcttaaggt tgggtcctag cccgtcactg agcctgttcc atccgacagc
      601 ggggaaccat tggagtctta gggcaaacac gtagatgagg atcagcccgg tgacgaatac
      661 gggcaaactg agcccagctt gggcaaaccc gctgaccacg cgatctgatc ttcgcccctc
      721 ccggtagccg gtgaacgccc ccaggggaac cgctatcagg agtgagaagc caacggcaac
      781 ggccattagt tcgagggtga tcggcaaccg gtgggtgatc tcatcggtca ccggctgtcc
      841 ggtaacgagg gaacggccga ggtctccctg cactgcgtcg cccagccacc gtccgtagcg
      901 gacgatcatc gggtcgttca gaccccattc ctcccggatc tgttcgacga actcccgatc
      961 ttgctgagca tcgatcggga tcagagcgtt gacggggtcg cccggtagga cgttggtgcc
     1021 gacgaaagta acgaaggaga ccacgatcac ggtcacgacg agacgcgtca agcgaatcgc
     1081 gaggatcttc ggcatctccg tcctttcggg atcaactcag gtcacctgag tcccagtcat
     1141 gacctgttct atgcggcgcc cctcacaacg acaatcctgc accctcccgc gacgcccgac
     1201 aggaaggcag ttgtgggggc cgtgcccatt ggacacgacc cccacaacac caactaacta
     1261 ctcgtagcta ccaactagtt gtcggtccgc caaacctgtt cccaccggcc aacggcactc
     1321 gggtggccga tgcccaatgt cccgtcgggc aggacccagg tgtcgagccc ggtgatccct
     1381 tcctcgaccg cgataaccgt tgccgtaccc cctgagaacc agtggggcac gtcacggttg
     1441 gcgatgatgc cgatcttctc gtagagcgcg taacgctctg cgaagtcgtt cgtcaccagg
     1501 gcgtctgcca ggtaaccctg aatctccgcg ttgtcgtagt tggagaagtt caggggattg
     1561 gcctgccagt tgttgaaggc ctggccaatg ggcacggacg gatccgcctc actgccgtag
     1621 cgccagcagt gggcaccatg gtcacccagg aagccgttgg cgattcccaa cgagacgttg
     1681 atgtgggtct gctggtcgtt ccccgtgtcg acgtcgacgt cgacgagccc ggtcgctgtc
     1741 cacaactggt cgagaaccga catcgctgca acgagcgtcg ggtccatcgg gcatgccaga
     1801 tccacatgga tcttctctcc ggcggccttg ccgtcggacc gggacggatc gtccacgtac
     1861 tcctgaagca gagcgattcc agcgtcgaag tcgaaatgcg gatacgagtc ggcgaccgcc
     1921 tgcgaccacc acgggctgtc caccgagaag aactgtgtga ccggtgatga aatcccggct
     1981 ccacccagtg cctcgatgac cgcctcctgg ttgttggcca gggtcaggcc acgccgaacc
     2041 cgaacgtcgt catacggcgg cacctgtgca ttgaagtgtc caccaccggc atcgttgccc
     2101 tggaactcgt acaggaccac accttccagc gaccgggcat cacgcactgt ggcctgacgc
     2161 cgagactcca tcgccgaggt cgtacctgca gctagcgccg ctagacgggt cgtctcgtca
     2221 ggaatcggcc ggtaggagac gccgtctagg tacggaagtt gcctgccgtt gatcgacagc
     2281 cagtagttcg ggttacgaac cagaaccgtc tcgttgtcga tgtcacggct gtccatgacg
     2341 aacgggccag tcccaattgg gttggcgttg aaggcatcgg aatctgctgc cgcctccggg
     2401 tcgaacgggt agccgatcgg agcaccgttg aggaacgacg ggaaggccac gttggtggct
     2461 cccagcgtgt agtcaaccgt gaggtcccct gtggcttcga cgttgatcaa acctgcggta
     2521 gcgatcgcac cggcagccga agaaccggcc tgctggatcg gccacatgtc ctcgagcgtc
     2581 tgggcagaaa gcgccttgcc gttgtggaag gtcaccccgg atcgcagggt caccgtccaa
     2641 acggtgaagt cgtcgttcgc ggagatcgac tcggcaagcc atggcaggta ttcgcccgac
     2701 ttggcctggc ggagcagcgg atcgaacatc tggcccagca tcgtgtaaca cgacgatgcg
     2761 cacgcgtcct cccacggtcg gaggccaaca gcctcggcct cgaggccgac gaccaccgtg
     2821 ccgccgtact gcggcttggc tgccggtacg acgaggttgc cttcgccgag cgacgagccg
     2881 ccgggggcgt actcgtagac gacgttggcg ttggacgcag caatgtcacc ggagtcgccg
     2941 tggccgatca cggtgatctt ctgggaacca cagtcgccaa aggcgtcaca ggtgatcagg
     3001 ccaatgatgc ccgagtagtc ggtaaccgag ttgaggtgct cgcgcacgcc cgcccggtcg
     3061 atgaccagcg tgccgcc
//
LOCUS       DASCMR010000169         3273 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000832591, whole genome shotgun sequence.
ACCESSION   DASCMR010000169 DASCMR010000000
VERSION     DASCMR010000169.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3273)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3273)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3273
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000832591"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1496)
                     /gene="dnaG"
                     /locus_tag="QGG16_04285"
     CDS             complement(<1..1496)
                     /gene="dnaG"
                     /locus_tag="QGG16_04285"
                     /inference="COORDINATES: protein motif:HMM:TIGR01391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003896 - DNA primase activity [Evidence
                     IEA];
                     GO_process: GO:0006269 - DNA replication, synthesis of RNA
                     primer [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HJP24525.1"
                     /translation="MGIVDEDVRKVRDESDIIRIITEHTQLKKTGAQWMGLCPFHGEK
                     SPSFSVNAEKGVYYCFGCQVSGDVIDFVREIEGLDFAGSVEFLAAKTGIPLRYTDQNE
                     GRRRNRRKEYAEIVQKAVDSYHRRLLEDPAARPARDYLRARGYGGEVARRFQIGWAPD
                     DWSLLSRELHLSDEDLKATGLGGINKRGGQYDFFRARIVFPIFDVQGNPVGFGGRKLP
                     DGEGPKYKNTSDAAEYYSKSDVLYGLHWAKAEAGRLDELVVCEGYTDVIGCHLAGIER
                     AVATCGTALTPSHARLIGRFARRVVLAFDADGAGQAAAERVYAWEEEFGLQFAVAALP
                     EGADPGDLAGSDPEALRQAIDGARPFLEFRVDRVLARGDLDSAEGRARAATEAMTLVA
                     EHPDSLVRDQYAMSIADQCQVGIDELRRRGAAAVAAGPRGRTVPASDRTAAGASPDTG
                     HLTPETQALRLLVHRPDPISVHLSPVLFDDRLNRAAYLALREAGDLHGA"
     gene            complement(1579..3135)
                     /locus_tag="QGG16_04290"
     CDS             complement(1579..3135)
                     /locus_tag="QGG16_04290"
                     /inference="COORDINATES: protein motif:HMM:NF014895.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative PEP-binding protein"
                     /protein_id="HJP24526.1"
                     /translation="MDSSDGLRSLVAEATTAGSAEARWRAVAAVDPALVERLIHGGPA
                     ALTPDGQSRPVLLAAGTGASPGVATGVVCLTAEAVLDAVDRDEDALLVCDETSPADEI
                     GMRMATGILTTRGGVASHAAVVARGWGIPAVVGVVGMVVGDDHVVLGEVRVDAGDVVS
                     VDGGSGEVLAGAVESVRAAEAGEVPELDVLLEWADEVRGERIGVRANADRAEDADRAR
                     LFGAEGIGLCRTEHLFLGDRLPLVRAFLLADSPRDETEALAALGAAQREDLTGVLVAM
                     APLPVTIRLLDAPLHEFLGDDAPAEWREHNPMLGIRGVRLAVLREGLYRMQVRALLGA
                     MDDAAAAGSHAHAAIMVPLVSTAAELALVRGWVLDEIEEWDPTEPPAVGTMIETPRAA
                     LLAADMAAHADFFSFGTNDLTQMVFGLSRDDVEQRMMGPYLERGLLPADPFAHLDPGA
                     VAPLVAAATRAGRMARPDLEVSVCGEHGGDPESIRLLVEAGVDSVSCSPFRVPVARLA
                     VAQALIARDG"
BASE COUNT          522 a         1183 c         1063 g          505 t
ORIGIN      
        1 gctccgtgga ggtcaccagc ctccctcagc gccagatagg ccgcacgatt gagtcgatcg
       61 tcgaaaagca cgggcgagag gtggacgctg atcgggtccg gtcggtggac gagtagacgg
      121 agcgcctggg tctcaggagt gaggtgaccg gtgtccggcg atgctcccgc tgcggtcctg
      181 tccgaggcgg gcacggtccg tcccctcggg ccggctgcca cagctgccgc cccccgcctt
      241 ctgagttcgt cgatgcccac ctggcactgg tcggcgatac tcatggcgta ctggtcacgt
      301 accagcgagt ccgggtgctc ggcgaccagc gtcatggcct cggtggctgc ccgggcccga
      361 ccttcggcag agtccaggtc gccgcgggcc agcaccctgt ccacgcggaa ctccaggaac
      421 gggcgagcgc catcaatagc ctgccgcaac gcctccgggt ccgacccggc caggtcacct
      481 gggtcggctc cctcgggaag ggcggcgacc gcgaactgga ggccgaactc ctcctcccag
      541 gcgtagaccc gctcggccgc cgcctggccc gctccgtcgg cgtcgaaggc cagcaccacc
      601 cgtcgggcga accggccgat gagtcgagcg tggctggggg tgagggctgt cccgcaggtg
      661 gccaccgccc gctcgatgcc ggccagatgg cagccgatga catcggtgta gccctcgcat
      721 accaccaact cgtcgaggcg ccccgcctcg gccttcgccc aatggaggcc gtagagcacg
      781 tcggacttcg agtagtactc ggcggcatct gaggtgttct tgtacttcgg gccctccccg
      841 tctggcagct tccggcctcc gaagcccacc ggattcccct ggacgtcgaa gatcgggaac
      901 acgatccggg cccggaagaa gtcgtactgg ccacctcgct tgttgatccc gccgagtccg
      961 gtggctttca ggtcttcgtc ggacaggtgg agttccctgg aaagcagcga ccagtcgtcg
     1021 ggtgcccacc cgatctggaa gcgacgggcc acctcgccgc cgtacccccg ggctcgcaga
     1081 tagtcgcggg ccgggcgggc cgccgggtcc tccagaagac gtcgatggta ggaatccact
     1141 gccttctgga cgatctcggc gtactccttg cgacggttgc ggcggcgtcc ctcgttctgg
     1201 tcggtgtacc gcagcgggat gccggtcttg gccgccagga actccaccga gccggcgaag
     1261 tccagtccct cgatttcgcg gacgaagtcg atgacgtcgc ccgacacctg acacccgaag
     1321 cagtagtaga cgcccttctc ggcattgacc gagaaggagg gagacttctc gccgtggaac
     1381 gggcacagtc ccatccattg ggcgccggtc ttcttgagtt gggtgtgttc ggtgatgatc
     1441 cggatgatgt cggactcgtc gcgaaccttc ctgacgtcct cgtcgacgat gcccatggcc
     1501 ggacggtacc gcccaccggc ctacccggtc agccgggcct gttgatcgcc ttgtcagtcg
     1561 tcctgtcagc gcaacagatc agccgtcgcg ggcgatgagt gcctgggcca cggccaagcg
     1621 ggccaccggc acccgaaacg gggaacacga caccgagtcg acccccgcct cgaccagcag
     1681 acgtattgat tccgggtcgc caccgtgctc accgcacaca ctgacctcta ggtcggggcg
     1741 ggccatccgt ccagcgcggg tagccgcagc caccagaggc gccacggcgc ctgggtctag
     1801 gtgggcgaac gggtcggcgg gtaacagccc ccgctcgagg tacggaccca tcatccgttg
     1861 ttccacgtcg tcacggctta gcccgaacac catctgggtg agatcgttcg ttccgaagga
     1921 gaagaagtcg gcatgggctg ccatgtcagc ggccaggagg gccgcccgtg gcgtctcgat
     1981 catcgttccg acagcaggtg gttcggtggg gtcccattcc tcgatctcgt ccagcaccca
     2041 gcccctcacg agggccaact cggccgctgt cgagaccagt ggcaccatga tcgctgcatg
     2101 ggcgtgcgaa ccggcggccg cggcgtcgtc catggccccc agcagcgccc ggacctgcat
     2161 ccggtagagc ccctcacgca atacggcaag gcggaccccc cggatgccca gcattgggtt
     2221 gtgttcgcgc cactccgccg gggcgtcgtc gccgaggaac tcgtgcagcg gcgcatccaa
     2281 caagcggatg gtcaccggga gcggcgccat ggcgaccagg acgccggtca ggtcctccct
     2341 ctgggcggca cccagcgcgg ctagcgcctc ggtctcgtcg cggggtgaat cggccagcag
     2401 gaacgctcgc accaggggaa ggcggtcccc gaggaacagg tgctcagtcc gacacaagcc
     2461 gattccctcg gcaccgaaca agcgcgcccg gtcggcatct tcggcccggt cggcgttggc
     2521 ccgaaccccg atccgctcac cgcgtacctc gtcggcccat tcgaggagaa cgtccagttc
     2581 tggcacctct ccggcctcgg ccgccctgac cgactcgacc gccccagcca gtacctcgcc
     2641 cgacccgccg tcaaccgaaa ccacgtcacc ggcgtcgacc cgaacctcgc ccagtaccac
     2701 gtggtcgtca cccaccacca tcccgactac cccgaccacc gcggggatcc cccacccgcg
     2761 agccaccacg gcagcgtggc tggccacccc acctcgggtc gtcaagattc cggtggccat
     2821 gcgcatgccg atctcatcgg ctggcgacgt ctcgtcgcag accagcaggg cgtcctcgtc
     2881 ccggtcgacg gcgtccaaca cggcctcggc cgtcaggcag acgacccccg tggccactcc
     2941 ggggctggcg cccgtcccgg cggccagcaa aacgggtcga ctctggccat cgggcgttag
     3001 cgcggcgggg ccaccatgga tcagcctttc aactagggct ggatcgacag cggccacggc
     3061 gcgccaccgg gcttcggccg aaccggcggt cgtcgcctcg gcaaccaggg aacgcagtcc
     3121 atccgagctg tccacgcggt cctcaggtga tgacatcaag tcgctctggt cgctcaggga
     3181 cactggcctc gcaggggctg gggccgatca ggccgcgagc cgctccgaga ggtaggccac
     3241 caggtcgcca atggccaccc gttcctgagc cat
//
LOCUS       DASCMR010000170         2196 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000835929, whole genome shotgun sequence.
ACCESSION   DASCMR010000170 DASCMR010000000
VERSION     DASCMR010000170.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2196)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2196)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2196
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000835929"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..251
                     /locus_tag="QGG16_04295"
     CDS             <1..251
                     /locus_tag="QGG16_04295"
                     /inference="COORDINATES: protein motif:HMM:NF026213.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alkyl sulfatase dimerization domain-containing
                     protein"
                     /protein_id="HJP24527.1"
                     /translation="KALVEAGDVRLACHLVEMAVAAEPEHEGAQRARADVYWHRRAAE
                     RSLMSKGVYAAAARESEDALGEDVAGDSIATSIRGSLG"
     gene            complement(300..1310)
                     /gene="menC"
                     /locus_tag="QGG16_04300"
     CDS             complement(300..1310)
                     /gene="menC"
                     /locus_tag="QGG16_04300"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: protein motif:HMM:TIGR01927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HJP24528.1"
                     /translation="MITDFTDLEPPDVREIGVDRVALAYRSPMVTAHGTISQRNVVVL
                     TLVDAEGRTGRGEAAPLTAFTPETVDGAERALRRWADDGAEPTGSPTARAAIDGALLD
                     LAAKAAERPLHDLLAPGSPGVVPVSKLVVGATPDEAAAAAASAVALGHRTVKVKVAAG
                     LFEADLARLKAVRDAIGDARLRIDANGGWTIDEAPRHLERLADLEIEFVEEPVSGLDA
                     LAAVRATSPIPLAVDESITTQEDLDRAISLVSADVVVLKPSAMGGPLVTAAAARTASE
                     AGLTVVVTSLLEGSVGIGAAAHLASALGALDPAPGLATASLLHTDNSQSLLPRRGALH
                     LD"
     gene            complement(1307..2143)
                     /gene="menH"
                     /locus_tag="QGG16_04305"
     CDS             complement(1307..2143)
                     /gene="menH"
                     /locus_tag="QGG16_04305"
                     /EC_number="4.2.99.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR03695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070205 -
                     2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009234 - menaquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase"
                     /protein_id="HJP24529.1"
                     /translation="MTDELGLHVEFEGPSDGDAEGRPILVLHGFTGSTITMWPLARPL
                     SDTRSVAVVDLPGHGRSTTVRSTDDAQTYGFEHTVDAVAQVIDQHNLGPTHLVGYSMG
                     GRVALGLAIRHPEQVTSLSLIGASPGLSDPVERAARRRADDELADDLLEQGLPAFVDR
                     WMASPLFASQKRLGTDSLADARAQRLTNDPDGLAASLRGSGTGAQPSYWHHLAGIDVP
                     VLLLVGDEDPKFRAIAMRMAAGLVRSAIEVVPEAGHAAHLEHPDHVVAAIREMLDEVD
                     GQ"
BASE COUNT          321 a          708 c          812 g          355 t
ORIGIN      
        1 cgaaggctct ggtcgaggct ggagacgtcc gtttggcctg tcatctggtg gagatggccg
       61 tggcggccga accggaacac gagggggcac agcgggcccg ggccgacgtc tactggcacc
      121 ggcgggccgc cgaacggtca ctcatgtcca agggcgtgta cgcggcggcg gcccgtgagt
      181 ccgaagacgc cctcggtgag gacgtggccg gggattcgat cgcgacgtcg attcggggtt
      241 ccctgggttg agtttcgact caggcctcgg ctgtggtcgc tgtctggtcc cgggtgggat
      301 caatcgaggt ggagagcgcc gcgtctcggc agcagcgact ggctgttgtc ggtgtgcagc
      361 aggctggcgg tagccagccc gggtgccggg tccagtgcgc cgagcgcaga cgccaggtgg
      421 gccgccgcac cgatgcccac cgacccctcg agtagcgagg tcaccacgac ggtcaggccg
      481 gcttcggagg cggtccgggc cgcggcggcg gtcaccaacg gtccacccat ggcggacggc
      541 ttgagcacca cgacgtcggc gctgaccaga ctgatggccc ggtcgagatc ctcctgggtg
      601 gtgatggact catccacggc caacgggatc ggcgacgtgg cccggacggc tgccagggcg
      661 tcgagaccgg acaccggttc ctccacgaac tcgatctcta ggtcggcgag gcgttccagg
      721 tgacgggggg cctcgtcgat cgtccaacca ccgttggcgt cgatccgtag acgggcgtca
      781 ccaatggcgt cccggacggc tttcaagcgg gccaggtcgg cctcgaacag accggcagcg
      841 accttcacct tgaccgttcg gtgtccgagg gcgacggcgg aagcggcggc tgctgctgcc
      901 tcgtctggag tggcgccaac caccagtttc gaaacgggca cgacgccggg actcccggga
      961 gccagcaggt catggagggg ccgctcggcg gctttcgcgg cgagatccag cagggctccg
     1021 tcgatggcgg cccgagcggt tggactcccc gtgggttcgg cgccgtcgtc ggcccagcgc
     1081 cggagcgccc gttccgcccc gtcgacggtc tcgggggtga aggccgtcag cggggcggct
     1141 tcaccgcggc cggtacgtcc ctcggcgtcg accagcgtca gcaccacgac gttgcgctga
     1201 ctgatggtgc cgtgggcggt caccatgggg gagcggtagg ccaacgccac ccggtcgacc
     1261 ccgatctccc tgacgtccgg aggttcgagg tcggtgaaat ccgtgatcat tgcccgtcga
     1321 cctcgtcgag catctcccgt atggcagcca ccacgtggtc ggggtgctcg aggtgggctg
     1381 cgtgcccggc ctcggggacc acctcaatgg ctgaccgcac caacccggcg gccatacgca
     1441 tggcgatggc tctgaacttt gggtcctcgt cgcctaccag caggaggact ggcacatcga
     1501 tgcccgccag gtggtgccag tacgacggct gggcgcccgt gccggagcct cggaggctgg
     1561 cggctagtcc gtctggatcg ttggtcagtc gctgggcccg ggcgtcggcc agcgagtcgg
     1621 tgccgagacg tttctggctg gcgaacagcg ggctagccat ccaccggtcg acgaaggcgg
     1681 gaaggccctg ttccagaagg tcgtcggcca gttcgtcgtc ggctcgtcga cgtgccgccc
     1741 gttctacggg atccgacaat cctggggacg ccccgatcag agagagggag gtcacctgtt
     1801 cggggtgtcg gatcgccagg ccgagggcca cccgtccacc catggagtag ccgaccaggt
     1861 gggtcggtcc aaggttgtgc tggtcgatca cctgggccac ggcgtcgacg gtgtgttcga
     1921 acccgtaggt ctgggcgtcg tcggtggagc ggacggtagt gctacggcca tggcccggta
     1981 gatcgaccac cgccaccgac cgggtgtcag acagcggtcg ggccaggggc cacatggtga
     2041 ttgtcgaacc ggtgaaaccg tggaggacca ggatcgggcg gccttcggca tctccgtcgg
     2101 aaggtccctc gaattcgacg tggagtccca gctcgtcggt catccaatcg cctctgggcc
     2161 tcggagcgca cggtcggcta cccgggcggc ttcgcg
//
LOCUS       DASCMR010000171         1555 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000836095, whole genome shotgun sequence.
ACCESSION   DASCMR010000171 DASCMR010000000
VERSION     DASCMR010000171.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1555)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1555)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000836095"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..676)
                     /locus_tag="QGG16_04310"
     CDS             complement(<1..676)
                     /locus_tag="QGG16_04310"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24530.1"
                     /translation="MTVVVGTGGVLDRFGQKVTVEDPATVLEWDLAISEVLDHRGDPD
                     VRLTELTARDEAFVMGLIVTLAGAVLGGDDPRSPTVRDALRELHGRCVGATVRERDHA
                     AAVADLVKGEFSRSAARWEAVAEAHPHDVVATRLAHFVHLHVGDDEGRLRASTAVLDR
                     LTPADPGYGVAAGQHAFALEEVGRLEEAEWFGHCALEVDPVDVWALHALAHVYETRNL
                     QEEAVAF"
     gene            complement(696..926)
                     /locus_tag="QGG16_04315"
     CDS             complement(696..926)
                     /locus_tag="QGG16_04315"
                     /inference="COORDINATES: protein motif:HMM:NF018595.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HJP24531.1"
                     /translation="MQVRTEGDDQVSLIVDEDRCIGIGQCELLEPEVFQLGDEDAISR
                     VVDSAGLPRVRALEVADRCPSSAISIAEPHGA"
     gene            complement(926..>1555)
                     /locus_tag="QGG16_04320"
     CDS             complement(926..>1555)
                     /locus_tag="QGG16_04320"
                     /inference="COORDINATES: protein motif:HMM:NF012296.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HJP24532.1"
                     /translation="LFEYGEKMRGLRLAEPADDLVTGLVQAEADGERLTPAEYKNFFQ
                     LLVFAGNETTRTAIVHGGMAFADHPDQWEAMVSDPGLVTTAVDEVIRWATPVLHMRRT
                     ASRNTELAGTPIAAGDKVVMWYAAANRDPDAFSDPFQFDVARIDNPHFAFGGGGPHFC
                     LGAFLARMEIQVLLEEMVKRGVSLERRGEPERIASNFVHGVASVDLAVA"
BASE COUNT          311 a          542 c          450 g          252 t
ORIGIN      
        1 agaaagccac agcctcctcc tgaaggttgc gggtctcgta cacgtgagcg agcgcatgaa
       61 gtgcccaaac atcgaccggg tcgacctcta gcgcgcaatg gccaaaccac tcggcctcct
      121 cgaggcggcc gacctcctca agggcgaagg cgtgttggcc ggcggccacc ccgtaaccgg
      181 gatcagcagg ggtaagacga tcaagaacag cggtcgacgc ccggagacgt ccctcatcat
      241 cgccgacatg gaggtggacg aagtgggcga gccgggtggc gacaacgtcg tgtggatgtg
      301 cctcggcaac agcctcccaa cgggcggccg aacgggagaa ctcccccttc accaggtctg
      361 ccacggctgc ggcatggtcg cgttcgcgga ccgtcgcccc cacacaacga ccgtgtagtt
      421 ccctgagagc atcccgaaca gtgggtgacc gaggatcatc tcctcccaga accgcaccgg
      481 cgagagtcac gatcaggccc atcacgaacg cctcatcccg ggccgtgagt tccgtcaaac
      541 gcacgtcggg atcaccccga tgatcaagga cctcgctgat cgccaagtcc cactcgagca
      601 cggtcgctgg atcttcgacg gtcaccttct ggccgaaccg gtcaagcacg cctcccgtcc
      661 cgactaccac ggtcacgcct gcatcctgtg aagcttcatg cgccatgcgg ctcagcgatc
      721 gagatcgccg agctcgggca cctgtccgcc acctcaagtg cccggacccg aggcagaccg
      781 gcactatcca ctactcgaga gatcgcgtcc tcgtcgccca gctggaacac ctcgggctcc
      841 aaaagttcac actggccgat tccgatgcac cggtcctcgt cgacgatcag gctcacctgg
      901 tcatcaccct cggtccgaac ctgcattacg ccaccgccag gtcgaccgag gccacgccgt
      961 ggacgaagtt tgaggcgatt cgctccggct caccccgacg ctcgagcgac acccccctct
     1021 tcaccatctc ctccaagagc acctgaatct ccatccgggc aagaaaggcc ccaaggcaga
     1081 aatgggggcc acctccacca aaggcaaaat gtgggttgtc gattcgggct acgtcgaatt
     1141 ggaaggggtc ggagaatgca tccggatccc ggttggccgc cgcgtaccac atcacaacct
     1201 tgtcacccgc ggcgatcggg gtcccggcca actcggtgtt ccgactagcc gtccggcgca
     1261 tatgcaggac cggtgtggcc caccgaatta cctcgtcgac ggccgtcgtc acgagaccag
     1321 gatcggagac cattgcctcc cactggtcag ggtggtcggc gaaggccatg cccccgtgga
     1381 cgatggccgt ccgggtggtc tcattgccgg cgaaaaccag aagctggaaa aagttcttgt
     1441 actcggctgg cgtaaggcgc tcaccgtcag cctcggcctg caccagtccg gttaccaggt
     1501 cgtcggctgg ctcagcaagg cgcagtccac gcatcttctc tccgtactcg aagag
//
LOCUS       DASCMR010000172        10487 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000844540, whole genome shotgun sequence.
ACCESSION   DASCMR010000172 DASCMR010000000
VERSION     DASCMR010000172.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 10487)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10487)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10487
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000844540"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1292
                     /locus_tag="QGG16_04325"
     CDS             <1..1292
                     /locus_tag="QGG16_04325"
                     /inference="COORDINATES: protein motif:HMM:NF014804.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HJP24533.1"
                     /translation="RQLADGIGYRSAGTVEFLVDDASGEFFFLEVNTRLQVEHAVTEE
                     VTGIDLVREQLRIAAGEPLGYGQNDVTFDGHAIEVRLYAEDPSAGFLPATGTLEAWEP
                     ADEPAVRWDTGVTAGSVVGVDFDPMLAKVVAHGPTRAEAAGRLALALERMHLGGVTTN
                     RDFLAATLRHEAFLAGDTTTDFIERHTPATTMVHDGPTADRVATTAALWIQGRNRTNA
                     LVQGQAPSGWRNARLPDQAVTLARVGSEDAPTAVRYRSERDGTFSVSITQPDSRSDDD
                     SVRHQATIYAWSANGIDLAVDGIRTTALITAVTADELAGRGEVLHVTMANTTTSLETV
                     PRFNLPGTEAPTGGLTAPMPGKVLDVLAAAGDVVIAGQAMVVLEAMKMEHRMTAPFDG
                     TVAEVRVTAGDQVDNGAVLMVIEPADGHPMGEDGADG"
     gene            1285..3087
                     /locus_tag="QGG16_04330"
     CDS             1285..3087
                     /locus_tag="QGG16_04330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyclic terpene utilization AtuA family protein"
                     /protein_id="HJP24534.1"
                     /translation="MAEPIRIANCSGFYGDRLSAAAEMVEGGHIDVLTGDWLAELTML
                     ILARTKAKRAGGGFAGSFVKQMEQVMGTCLDRGITVVSNAGGLDPAGCAEALAEVADR
                     LGLSPTIAYVAGDDLLERLDDLLAAGVDLPDMVTGEPLADPGRFVSANAYLGCWGIVD
                     ALDRGADIVVTGRATDAAIVCGPAAWHHGWARDDWDALAGAVVAGHVIECGTQATGGN
                     YSFFTEVPGMGRVGFPWAEVAADGSSTIGKHDGTGGQVSIGTVTSQLLYEIGSPAYLG
                     PDVTSRFDTIQLDEVGPDRVRIHGVQGEPPPTTLKVSMNAMGGHRADLSVALTGLDVE
                     AKAALAEEAFWIAMPDGPDDFESVESRIVRTDKIDPASNEEAVAQWCLTLKDADERKV
                     GRGVFNAMTEMALSTIPGFFSVRSSASRTFGVHRAGLVPADLVPQDVVVLEAGQVTSR
                     TIVESAAPTSEAADVSVEPRPGPDVTIPGGPTVAVPLGRIAGARSGDKGGDANLGLFV
                     RDDAAWAWLDDHLTVDRLRVLLPETADLSIERHRLPAIRSLNFMIRGLLGEGVAASSR
                     QDGQAKSLGEWIRARIVDVPASLLPAEQSNEASG"
     gene            3087..3785
                     /locus_tag="QGG16_04335"
     CDS             3087..3785
                     /locus_tag="QGG16_04335"
                     /inference="COORDINATES: protein motif:HMM:NF012655.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HJP24535.1"
                     /translation="MAKSTALLAVEQATEQAAEQARRLRAVPAPRPVLDREREDQLTG
                     RQREVLDQLVALFADGFVELTMADIAAQAGCSLRTLYDLAPSRDELVLTVIDRNLRHI
                     GRAAVGAMAPDMAPLEAIRAYLRAANLAVASTTPAFARDQAATPSTHRLATAHSDYLV
                     AVTRTLLDLAVERGNLADPSGDPIDTAAVARVVAGLGAMFALPEHIEAIDSTPRDAAN
                     TMVDVILRGLESTP"
     gene            3803..4594
                     /locus_tag="QGG16_04340"
     CDS             3803..4594
                     /locus_tag="QGG16_04340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03084 family metal-binding protein"
                     /protein_id="HJP24536.1"
                     /translation="MANLTADLTAEQQALDDVVAHLDLDAWDMATASPRWTVGDQIAH
                     LAYFDATATLAITDPEGFRSAVDGLMGVARDGEEAIDDLTMGAYRRLTPPERLDAWRD
                     GRRRLAAAAGTLADDAQVPWYGPSMGGKSFLTARLMEAWAHGQDVVDAVGAIRPPTDR
                     LRHIAQLGVMTRGWSYANRRMEAPDVAVDVVLEAPSGAVWTWGPGDASETISGPAEDF
                     CLVVTQRRHVDDTVLRMTGDGARDWMVRAQAFAGPPTNGPDAGSS"
     gene            4594..5379
                     /locus_tag="QGG16_04345"
     CDS             4594..5379
                     /locus_tag="QGG16_04345"
                     /inference="COORDINATES: protein motif:HMM:NF012596.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HJP24537.1"
                     /translation="MPLVETTRGEDGLAGVVTVTLADEENRNALSAALVGELVETLDA
                     ADSDPTVRVVVLTNRGRVFCAGADLSERSGGGARDGGPPPKSVDPAALFSRFRSSPKI
                     YVGRIAGHCVAGGMGLAAAMDLTVVDESAKFGFTEVRRGIAPAMISVLCLPKMRPTQA
                     AEAMLLGNRMTGADAARLGLVNQAVPADELDAAVESFVTDLLAGGPDALAATKQLLTQ
                     VPGMDVDEAFAWTAELSSTIFRSDEAREGMRAFLEKRPPSWTD"
     gene            complement(5405..6787)
                     /locus_tag="QGG16_04350"
     CDS             complement(5405..6787)
                     /locus_tag="QGG16_04350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015799357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HJP24538.1"
                     /translation="MSRLDLVAAAYLVAAVLFVLGLKSLGRPRTAPRGNLLGASGMLV
                     AVLATLLDRSIVDFRVLLAGLVVGSAIGMVLAVKVRMTAMPQLVALFNGFGGGASVLV
                     ATASLVEVGDQGLVDDQFAVTAALTALIGAVTLTGSMVAFTKLQEIGSLRSFPGLAVL
                     RATMVIVAVVASVMVVTRPGDQGWMWALVAAGALLGVFGTIAIGGADMPVVIALLNSC
                     SGVAASTAGFVLDNSLLIVAGSLVGASGLVLTQIMCRSMNRSLFDVVFGSLAASGVAP
                     DASDVYGDRVISTSAEEVAMLLEVAERVAIVPGYGLAVAQAQHAVRDLMRTLNDSGVE
                     VVFGIHPVAGRMPGHMNVLLAEAEIDYERLLDMDQINPTFAQTDVTIVIGANDVVNPS
                     ARTDPDSPIAGMPILDVDESRTVVVVKRSLSPGFAGVPNPLFAADGTLMLFGDGKDAV
                     LDVVAALLNG"
     gene            complement(6784..7098)
                     /locus_tag="QGG16_04355"
     CDS             complement(6784..7098)
                     /locus_tag="QGG16_04355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015799358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P) transhydrogenase subunit alpha"
                     /protein_id="HJP24539.1"
                     /translation="MTLLVALTLFVLAVFLGLELITKVPATLHTPLMSGSNAVSGITL
                     IGAMVSAGTDHSALTTWLGFVAVVLATVNVVGGFLVTGRMLAMFSARSTKRRPSVGEE
                     PS"
     gene            complement(7095..8213)
                     /locus_tag="QGG16_04360"
     CDS             complement(7095..8213)
                     /locus_tag="QGG16_04360"
                     /inference="COORDINATES: protein motif:HMM:NF013430.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit alpha"
                     /protein_id="HJP24540.1"
                     /translation="MRIAVLRERGDGETRVSLTPEAVGTLVSDGHEVVVEAGAGDGAG
                     MADGDYRSAGALVESNVGSVVGDTGLVTSIGGPGNLSTIGLLGPGHVVIGLLDPVWRP
                     EGVTALATTGATAISLDLVPRSTRAQAVDVLSSMATVAGFQAVVLAATRSYRMFPLLM
                     TAAGTVPPARVLVLGAGVAGLQAVATARRLGAIVEGFDIRPEALEQIRSLGGRSIEPP
                     VGADGGVPDAVRIHEVLAPHVVDADVVIGAAQIPGRQSPLLVTEAMIETMRPGSVVVD
                     LAVQRGGNCSVSRLDEDVVLGGVTVLGPSELATGTAVTASRMFATNLVNLVRMLDRDG
                     EPFVDPDDEVLAGMLVATGGEIVHPVVRDALGRGEANT"
     gene            complement(8436..8511)
                     /locus_tag="QGG16_04365"
     tRNA            complement(8436..8511)
                     /locus_tag="QGG16_04365"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8476..8478),aa:Gly,seq:gcc)
     gene            complement(8559..8789)
                     /locus_tag="QGG16_04370"
     CDS             complement(8559..8789)
                     /locus_tag="QGG16_04370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24541.1"
                     /translation="MTEPMLDVDAMLQRFRERAAAVRTRTLPPVGGEERQRFIDQAQN
                     DLLDFGIVGDAEADLVDGVLTMRIDLRSTVDD"
     gene            complement(8786..9133)
                     /locus_tag="QGG16_04375"
     CDS             complement(8786..9133)
                     /locus_tag="QGG16_04375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24542.1"
                     /translation="MRRRGLIAVHRRAHVLALVFLASLWLGTFALPADAQVTTIETVP
                     PDVDDEGRTAGERIDQAVVMLRVLGVVVVVSTAAYWWRTRPNVNGVRNQNRDELQVAA
                     EDEIRIENEEVAR"
     gene            complement(9170..9949)
                     /locus_tag="QGG16_04380"
     CDS             complement(9170..9949)
                     /locus_tag="QGG16_04380"
                     /inference="COORDINATES: protein motif:HMM:NF013328.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase family
                     protein"
                     /protein_id="HJP24543.1"
                     /translation="MPEILEVEAYRRLAEQVVGRTIATVEAPDHWFLKGGVTPTGMAD
                     ALTGRRITAARRHGKVLLLDSGGPTLGLRFGMTGRLLVDGRAAIEYLKWGGRRSNPVW
                     ERFGLRFRGGGRLWIDDPRRLGGAELEPNLGSLGPDAWTLGVVQLRMALTGGRGPLKA
                     RLLDQGRLAGLGNLLVDEVLWRAGLSPLRASGGLDPNEARHLHRVIRRTLDQMARRGG
                     SHTGDLFEHRRPGGACPRDGEPLRRDTVGGRTSWWCPGHQR"
     gene            complement(9971..>10487)
                     /locus_tag="QGG16_04385"
     CDS             complement(9971..>10487)
                     /locus_tag="QGG16_04385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HJP24544.1"
                     /translation="ISWLWGFATLHGANASPYDAYNAHRGVRTLGARLRQQSETALVL
                     AEFLEGRPEVAGVRYPGLASHPQHELAVRQMQSMGGLLTFDLAGGIDAGRRFVEATSI
                     ARQATSLGGPETLVCHSATTTHVSLTPEELETSDIGEGTVRVSCGLEHVDDLVDDFDR
                     GLNAAGARDPQ"
BASE COUNT         1865 a         3755 c         3339 g         1528 t
ORIGIN      
        1 cccggcaact ggccgacggg atcggctacc ggtcagccgg gacggtcgag ttcctggtcg
       61 acgacgccag cggcgagttc ttcttcctag aggtcaacac ccgccttcag gttgagcatg
      121 cggtgaccga ggaggtcacc ggcatcgacc tggtccgcga gcaactacga atcgccgccg
      181 gcgaaccgct gggctacggg cagaacgacg tgacctttga cggccacgcc atcgaggtgc
      241 ggctctacgc tgaggacccg tcagccggct tcctcccggc caccggaacg ctggaggcct
      301 gggagccggc cgacgaacca gccgtgcgtt gggacaccgg ggtgacagcg ggcagcgtgg
      361 tcggggtcga cttcgacccc atgctggcca aggtggtggc ccacgggccg acccgcgccg
      421 aggccgctgg acgcctggcc ctggcgcttg aacgcatgca cctcggtggg gtgaccacca
      481 accgggactt cctggccgcc acgctgcgtc acgaggcgtt cctggccggc gacaccacca
      541 ccgacttcat cgagaggcac accccggcga cgaccatggt ccatgacggc ccgacggccg
      601 accgggtggc gaccacggcc gccctgtgga tccagggacg caaccggacc aacgctctcg
      661 ttcagggcca ggcccccagc ggttggcgca acgcccgcct tcccgatcag gcggtcaccc
      721 tcgcccgggt gggaagcgaa gacgctccga ccgccgtccg ctaccgctcg gagcgcgacg
      781 ggacgttctc ggtgagtatc acccaacctg actcccggtc cgacgacgac tcggtccgac
      841 atcaggcgac gatctacgcc tggtcggcca acgggatcga cctggcggtc gacggcattc
      901 gaaccacggc actgatcacc gcggtgaccg ccgacgagtt agccggccgg ggcgaggtac
      961 tccacgtcac catggccaac accaccacgt cgctggagac ggtcccccga ttcaacctgc
     1021 ccgggaccga ggctccgacc ggtggcctga cggcacccat gcccgggaag gtcctcgacg
     1081 tgctcgctgc agccggtgac gtggtcatcg ccggacaggc catggtcgtg ctggaggcca
     1141 tgaagatgga acaccgcatg accgccccgt tcgacggcac agtggccgag gtacgggtga
     1201 cggccggcga tcaggtcgac aacggagccg tcctcatggt catcgaaccc gccgacggtc
     1261 acccgatggg cgaagatggc gctgatggct gaaccgatcc gcatcgccaa ctgctccggc
     1321 ttctacggag accgcctctc ggcggccgcc gagatggtag aaggcggcca catcgacgtc
     1381 ctgaccggtg actggctggc cgagttgacg atgctgattt tggcccgcac caaggccaag
     1441 cgggcgggcg gcggcttcgc cgggagcttc gtcaagcaga tggaacaggt catgggcacc
     1501 tgcctcgacc ggggcatcac ggtggtcagc aatgccggcg gtctcgaccc cgccggctgt
     1561 gccgaggcgc tcgccgaggt ggccgatcgc ctcgggctgt cacccaccat cgcctacgtg
     1621 gccggcgacg acctgctgga acgcctcgac gacctgctgg ccgccggcgt ggaccttccc
     1681 gacatggtga ccggcgagcc gctggccgac ccgggccgct tcgtgagtgc caacgcctac
     1741 ctcggctgct ggggcatagt cgacgccctg gaccggggtg ccgacatcgt ggtgaccggt
     1801 cgggccaccg acgctgccat tgtttgcggc ccggcggcgt ggcaccacgg ctgggcccgt
     1861 gacgactggg acgcactggc cggagccgtg gtagccggcc acgtcatcga gtgcggcacc
     1921 caggccaccg gtggcaacta ctcgttcttc accgaggtgc cgggcatggg ccgggtgggt
     1981 ttcccgtggg ccgaggtggc cgccgacgga tcatcgacca tcggcaagca cgacgggacc
     2041 ggcggccagg tgtcgatcgg caccgtgacc tcgcagttgc tgtacgagat cggatcaccg
     2101 gcctacctgg gccctgacgt gacgtcacga ttcgacacca tccagctcga cgaggtcggg
     2161 ccggaccgtg tgcggatcca cggcgtacag ggcgaaccac ccccgacgac gttgaaggtc
     2221 tcgatgaacg ccatgggcgg ccaccgtgcc gacctctccg tcgccctgac cggcctggac
     2281 gtcgaagcca aggctgcact ggcagaggag gcattctgga tcgctatgcc cgatgggccc
     2341 gacgacttcg agtcggtcga atcccgcatc gtccgtaccg acaagatcga cccggcatcc
     2401 aacgaggagg cggtggccca gtggtgccta accctcaagg acgccgacga gcgaaaagtg
     2461 ggtcgtggag tgttcaacgc catgaccgag atggccttgt ccaccattcc cgggttcttc
     2521 tcggtgcgta gcagcgcgtc cagaaccttc ggtgtccacc gggcaggcct cgtgcccgcc
     2581 gacctcgtcc cgcaggacgt ggtggtgctc gaagccggcc aggtgacctc acgaaccatc
     2641 gtggaatcgg ctgctccaac cagtgaagcg gccgatgtct ctgtcgaacc ccgaccgggg
     2701 cccgacgtga ccatccctgg gggcccaacg gtggccgtgc ccctcggccg catcgccggt
     2761 gcccgctcgg gcgacaaggg tggcgatgcc aacctcggcc tattcgtccg cgacgatgca
     2821 gcctgggcgt ggctggacga ccacctcacc gtggaccgcc tccgagtcct gctacccgag
     2881 acggccgacc tgtccatcga gcgtcaccgg ctgccggcta tccggtcgct caacttcatg
     2941 atccgtggcc tattgggcga gggggtggct gcgtcgtccc gtcaggatgg ccaagccaag
     3001 agtctcggcg aatggatccg agcccggatc gtggacgtgc ccgcctcact gctccccgcc
     3061 gagcagtcga acgaggcctc cggctgatgg ccaagagcac ggccctgctg gccgtcgaac
     3121 aggccaccga acaggccgcc gaacaggccc gccgactccg ggccgtgccc gccccccgtc
     3181 ccgtcctgga ccgcgagcgg gaggaccagc tcactggccg ccagcgtgaa gtcctggacc
     3241 agttggtggc cctcttcgcc gacggcttcg tcgagctcac catggccgac attgccgccc
     3301 aggccggctg ctcgttgcgc accctctacg acctcgcacc cagcagggac gagctggtac
     3361 tcacggtcat cgaccgcaac ctgcgacaca tcggacgagc cgccgttggc gccatggctc
     3421 ccgacatggc cccgctggaa gccatccggg cctacctacg ggcggccaac ctggccgtgg
     3481 cctcaaccac gccggcattc gcccgcgacc aggcggccac cccgtcgacc caccggctgg
     3541 ccaccgccca ctccgactat ctggtggccg tcacccgaac tcttctggac ctggccgtag
     3601 agcgtggcaa cctggccgat ccgagcggcg atccgatcga caccgcggca gtggcaaggg
     3661 tggtggccgg cctgggggcc atgttcgccc ttcctgaaca catcgaagcc atcgactcga
     3721 caccccgaga tgccgccaac accatggtcg acgtcatcct tcgaggactg gagagcacac
     3781 cgtgaccgac tcgcctctca ccatggcgaa tctcaccgcc gacctcacgg ccgagcagca
     3841 ggccctcgat gacgtcgtag cccacctcga cctcgacgcc tgggatatgg cgacggccag
     3901 cccccgctgg acggtcggcg accagatcgc ccaccttgcc tacttcgacg cgaccgccac
     3961 gttggccatc accgaccccg agggcttccg ctcggcggtc gatggcctga tgggcgtggc
     4021 ccgagatggc gaggaggcga tcgacgacct aaccatgggc gcctaccggc gactcacgcc
     4081 acccgaacga ctcgacgcat ggcgcgacgg ccgccgacgg ttagccgcgg cggccggcac
     4141 actggccgac gacgcccagg tgccgtggta cggaccgtcg atgggtggta agtcgtttct
     4201 cacggcccgt ctcatggagg cgtgggccca cggccaggac gtggtggacg ccgtgggcgc
     4261 catccgtccg ccgaccgacc gtctccgcca catcgcccaa cttggggtca tgaccagagg
     4321 gtggtcctac gccaaccgac gaatggaagc tcccgatgtg gccgtcgacg tcgtgctcga
     4381 ggcaccgtcg ggcgccgttt ggacgtgggg ccccggtgat gcatccgaaa cgatcagcgg
     4441 gccggccgag gacttctgtc tggtggtcac ccaacgccga cacgtcgacg acactgtgct
     4501 ccgaatgaca ggtgacggcg cccgggactg gatggtccgg gcccaggcct tcgccggccc
     4561 acctacgaac ggacccgatg cagggagttc ctgatgccac tggtagagac gacacgcggt
     4621 gaagacggcc ttgccggcgt cgtcacggtc accttggccg acgaagagaa ccgcaacgcc
     4681 ctgagcgccg cgctggtcgg cgaactggtc gagacactgg acgccgcgga cagcgatcca
     4741 accgtccggg tggtggtgct gaccaacagg ggtcgagtgt tttgtgccgg cgccgaccta
     4801 tcggaacgct cgggcggcgg cgcccgagat ggtggtcctc ctccaaagtc agtcgacccc
     4861 gcggcactgt tctcgcggtt tcggtcgtcc cccaagatct acgtgggccg aatcgccggt
     4921 cactgcgtag ccggcggcat gggactagcc gccgccatgg acctgacggt ggtcgacgag
     4981 tcggcgaagt tcggcttcac cgaggtgagg cgcggtatcg ccccggcaat gatctcggtg
     5041 ctgtgcctac cgaagatgcg gcccacccag gctgctgagg ccatgctgct gggcaaccga
     5101 atgacaggcg ccgacgcggc ccgtctcggc cttgtcaacc aggccgtccc ggccgacgaa
     5161 ctggatgccg ccgtcgaatc gttcgtgacc gacctgctgg ccggtggccc ggacgcactg
     5221 gcggccacca agcaactgct gacccaggtg ccgggcatgg acgtcgacga ggccttcgcc
     5281 tggacggccg aactctcgtc aacgatcttc cgatccgacg aagccagaga aggcatgcgg
     5341 gccttcctcg agaagcgccc cccgtcctgg accgactgac caccgaattg gccagcaatc
     5401 cccctcagcc gttcaacagg gcggccacca cgtcgagcac cgcgtccttg ccgtcgccaa
     5461 acagcatcaa cgtgccgtca gcggcgaaca gcggattcgg aacccccgcg aaacccggac
     5521 tgagcgaccg tttcacaacc accaccgtcc gggattcatc gacatccagg atcggcattc
     5581 cagcgatcgg cgagtctgga tcggtccggg ccgaagggtt caccacgtcg ttggcgccga
     5641 tcacgatggt cacatccgtc tgggcgaacg tcgggttgat ctgatccata tcgagcaagc
     5701 gttcgtagtc gatctcggcc tcggccagca ggacgttcat gtggcccggc atccgaccgg
     5761 ccaccggatg gataccgaac accacctcta caccggagtc gttcaacgtc cgcatgaggt
     5821 cccggacagc gtgctgcgcc tgagccacgg ccaggccata accggggacg atggccaccc
     5881 gctcggccac ctccaacagc atcgccacct cctcggcaga cgtggatatg acacggtcgc
     5941 cgtagacgtc cgaggcgtcg ggtgccaccc cactggccgc cagggaaccg aacaccacgt
     6001 cgaacaggga acggttcata gagcgacaca tgatctgcgt gaggaccagc ccgctggccc
     6061 cgacgagcga accggcgacg atgagcagcg agttgtcaag gacgaagccc gccgtggacg
     6121 cagcgacacc cgaacaggag ttcaggaggg cgatcaccac cggcatgtcg gcccctccga
     6181 tggcgatggt gccaaatact cccaataggg ccccggcggc caccagtgcc cacatccagc
     6241 cctgatcgcc gggccgggtg accaccatca ccgaagccac tactgcgacg atgaccatgg
     6301 tggcacgcag cacggcgagg cccgggaagg aacgcaggct cccgatctcc tggagtttgg
     6361 tgaaggccac catcgacccg gtgagggtga cggcgccgat caacgctgtc agggcggcag
     6421 tcacagcgaa ctggtcgtcc accaagccct gatctcccac ctcgacgagc gaggccgtgg
     6481 cgaccagcac cgacgcacct cctccgaacc cgttgaacag ggcaacgagc tgtggcatcg
     6541 ccgtcatccg gaccttgacg gccagcacca tgccgattgc agaacccacg acaagcccgg
     6601 ccagaaggac gcggaagtcg acgatagacc ggtcgagcag ggtcgccaga acagcgacca
     6661 gcatccccga agcgccgaga aggtttcccc ggggggcggt ccgcggccgt ccgagagact
     6721 tgaggcccag aacgaaaagc accgcggcga ccagataggc cgcggcgacc aggtcgagcc
     6781 ggctcatgac ggttcctccc caaccgacgg tcgacgcttc gtcgatcggg ccgagaacat
     6841 ggccagcatc cgcccggtca ccaggaaccc acccacgacg ttcaccgtgg ccaggacgac
     6901 ggcaacgaag ccgagccacg tggtcaatgc cgagtggtcg gtccccgccg agaccatggc
     6961 cccgatcagg gtgatgcccg acaccgcgtt ggagcccgac atgaggggcg tgtgcagggt
     7021 ggccggaacc ttggtgatga gttccaggcc gaggaagaca gccagtacga aaagcgtgag
     7081 agcgaccagc agggtcatgt gttcgcctcc ccgcggccca acgcatcacg gaccaccggg
     7141 tggacgatct cgccgccggt ggctaccagc atcccggcca gcacctcgtc gtccgggtcg
     7201 acgaatggtt caccgtctct atcgagcatc cggacgaggt tcacgaggtt ggtggcgaac
     7261 atccgggacg ccgtcaccgc ggtaccagtc gccagctcgg agggcccgag gacggtcacc
     7321 ccgccgagaa ccacatcttc gtcgagccgg ctgaccgaac agttgccgcc ccgctggacg
     7381 gctaggtcaa cgaccaccga tcccggacgc atggtctcaa tcatggcctc ggtcaccaac
     7441 agcgggctct gtcgaccggg gatctgggca gcgccgatca ccacgtcggc gtcgaccacg
     7501 tgaggcgcaa ggacctcgtg gatccggacg gcatcgggga cccccccgtc ggcgcccacc
     7561 ggcggttcga tcgaacgtcc acccagcgac cggatctgct ccaaggcctc gggacggatg
     7621 tcgaacccct cgacgatcgc acctaggcgc ctggccgtcg ccaccgcctg aagtccagcc
     7681 acgccggcac ccagcaccag tacccgggcc gggggtaccg ttcccgccgc ggtcatgagg
     7741 aggggaaaca tccggtacga acgtgtagcc gccagcacaa cggcctggaa gccggccacg
     7801 gtggccatcg acgacagtac gtcgacagcc tgggcccgag tgctgcgcgg aacaaggtcc
     7861 agcgatatgg ccgttgcccc ggtggtggcc agggccgtga ctccctcggg tcgccagacc
     7921 ggatccagca ggccgatcac gacgtgcccc ggacccaaca gaccgatcgt ggacagattc
     7981 ccggggccac cgatcgaggt gaccaaaccg gtatcaccga ccaccgatcc cacgttggac
     8041 tccaccaacg cgcccgccga gcggtagtcc ccgtcagcca tcccggctcc atcgccagca
     8101 cccgcctcga ccacaacctc gtgaccgtcc gagaccaggg tcccgacagc ctccggggtt
     8161 aacgagacac gggtctcgcc atcgccccgt tctcgcagca ccgcaatccg cacgatcccc
     8221 tccatccgcg ccgatcggcg tcggtcgagg atggtagcgc tcgtcgactg ggccggtcac
     8281 tccctgccag atcaggacat gggtcggtta cggacgtcaa cgtcgactgc atcgacccat
     8341 ccggcgacca cgaactcacc gacgacggcc tgggcggaac tcagtgtgtt gattccgaaa
     8401 acaggcagaa ccccctgctg ggcagggggt tcatttggag cggacgacga gattcgaacc
     8461 cgcgaccctc accttggcaa ggtgatgctc taccagctga gctacgtccg cgtcagaccg
     8521 aaacgatagc ggtcgggcgc tgctttgcgc cccatgggtc agtcgtcgac tgtcgaccgg
     8581 aggtcgatcc gcatggtcag taccccatcg acaagatccg cttcggcgtc accaacgatg
     8641 ccgaagtcca acaagtcgtt ctgggcctgg tcgatgaacc gctggcgctc ctcgcctccc
     8701 accggaggaa gagttcgggt tcgcacggcg gcggcccgct cccggaaacg ctgcaacatc
     8761 gcgtcgacat ccagcatcgg ctcggtcatc gggctacctc ctcgttctcg atccggatct
     8821 cgtcctcggc cgccacctga agctcgtccc ggttctggtt gcggacacca ttgacattgg
     8881 ggcgggtcct ccaccagtag gccgcggtcg acacgaccac aaccacacca agaaccctca
     8941 acatgaccac cgcctggtcg attcgttcgc cggccgtccg gccctcgtcg tcgacgtcgg
     9001 gcggcacggt ctcgatggtc gtgacctgag cgtcagcggg cagggcaaat gtccccagcc
     9061 acaggctggc cagaaacacc agcgccagga catgggcgcg ccgatgcacc gcgatcaggc
     9121 cccttctccg catacctgaa tcgtacttcc gctgcctagc accgacagtt cagcgctggt
     9181 gtccgggaca ccaccaactg gttcgaccac ccaccgtgtc ccgtcgaagg ggctccccgt
     9241 cccggggaca cgccccgccg ggtcggcgat gctcaaaaag gtcgcccgtg tggctcccac
     9301 cccgccgagc catctggtcc aacgtgcgtc ggatcacccg gtggaggtgc cgggcctcgt
     9361 tgggatccaa gccgcccgac gctcggagcg gcgacagtcc ggcccgccac agcacctcgt
     9421 cgaccagcag gttcccgagg ccggccagcc gcccctggtc caacagccgg gccttcaacg
     9481 gcccccgccc accggtcaac gccatccgca actgaacaac gcctagcgtc cacgcatcag
     9541 gaccgagcga accgaggttg ggttccagct cggcaccccc aaggcgtcgg gggtcatcga
     9601 tccacagtcg ccctcccccg cggaacctca gcccgaaccg ctcccatacg ggattagacc
     9661 gccgccctcc ccatttcaga tactcaatgg ccgcccgacc atcgaccagc agtcgtccgg
     9721 tcatcccgaa ccgcaggccc aacgtcggac caccggaatc caacaacagg acctttccgt
     9781 gccgccgggc cgcggtgatc cgccgcccgg tcagggcatc agccatcccg gtcggcgtga
     9841 ccccgccctt gaggaaccag tgatctggcg cctcgaccgt ggcgatggtc cgtccgacca
     9901 cctgctcagc caggcgtcga tacgcctcga cttcgagaat ctccggcacg attcctcccg
     9961 gcgggcccgc ctattggggg tctcgggcgc ctgccgcgtt aagtccacgg tcgaagtcgt
    10021 ccaccaggtc atcgacgtgc tccagcccac atgacacacg aaccgtccct tccccgatgt
    10081 ctgatgtctc gagctcttcc ggcgtgaggc tcacgtgtgt ggtggtcgct gaatggcaca
    10141 ccagggtctc tggtccaccc aacgacgtgg cctggcgggc aatggacgtg gcctccacga
    10201 atcgacgacc ggcatcgatg ccgcccgcca ggtcgaaggt gagcagacca cccatggact
    10261 gcatctgtcg gacagccagt tcgtgctggg gatgggaggc aaggcccggg tagcgaacgc
    10321 ccgctacctc gggtcggcct tcgaggaact cggctaggac cagcgccgtc tcggactgct
    10381 gccggagccg ggcaccgagg gtccggacgc cccggtgggc gttgtaggcg tcatacggcg
    10441 aggcgttggc cccgtggagg gtggcaaacc cccacaacca cgagatg
//
LOCUS       DASCMR010000173         2048 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000846072, whole genome shotgun sequence.
ACCESSION   DASCMR010000173 DASCMR010000000
VERSION     DASCMR010000173.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2048)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2048)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2048
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000846072"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..503)
                     /locus_tag="QGG16_04390"
     CDS             complement(<1..503)
                     /locus_tag="QGG16_04390"
                     /inference="COORDINATES: protein motif:HMM:NF019334.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004672 - protein kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase"
                     /protein_id="HJP24545.1"
                     /translation="MTDGFTDGAPAGPSGAMPAPGRMLGGRYRLGGVIGTGGSGTVYL
                     ADDLSLGRQVAVKVLHSSLVGDQAFVERFRAEARLVASLADPHVVAIYDWGVDGQAYL
                     VTEYLGGGSLRSILSSGRTLTPSQMLMVALEACRALDHAHRQGIIHRDVKPANLLFGQ
                     AARLRIA"
     gene            547..960
                     /locus_tag="QGG16_04395"
     CDS             547..960
                     /locus_tag="QGG16_04395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24546.1"
                     /translation="MTRRRALVISVLMGLGVGVLVLAALLPSENLGDVSVSTNPAVSE
                     LLPARGDTVLPQANVGAILAAGWVGEIVHIGGTAIPFDQQRVEKALNSVIFRPDAGLA
                     LERLPSQEVCATVRYWPVRNTDRTATIDWCFRVDG"
     gene            complement(1023..>2048)
                     /locus_tag="QGG16_04400"
     CDS             complement(1023..>2048)
                     /locus_tag="QGG16_04400"
                     /inference="COORDINATES: protein motif:HMM:NF012743.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HJP24547.1"
                     /translation="GQATPFARLEPVFVGGSTVAAATLHNADQVAVKDVRPGDVVVVR
                     KAGDVIPEVLRPVLSERPDGLAPWTFPTACPACDEPLVRPDGEAATFCGNHACPRQVR
                     GRIEHFVSRGALDIEGFGEQRVDLFVGEGLLNDVAGVFALDYDRIAGWDGFGETSVEN
                     LRRAVETSRERPLGRLLFGLRIPHVGTTVADLLAAAFGHLDLLQAATVEDLEAVEGLG
                     PIIAASVHEWLRQPRNVDLLGRLRSAGVNLEAPTTDPGDEVAQVLDGMAIVVTGTLAG
                     QSRDEAKAAIVARGGKSPGSVSVKTTALVAGEGGGSKLVKAEELGVPVLDEAAFNLLL
                     ASGQLPG"
BASE COUNT          341 a          737 c          668 g          302 t
ORIGIN      
        1 tcagcaatac gcaggcgggc ggcttgtccg aagagcaggt tggccggctt gacatcccgg
       61 tggatgatgc cctggcggtg cgcatggtcc agtgcccggc aggcctcgag ggccaccatc
      121 agcatctgcg acggcgtgag cgtgcgaccc gacgacagga tgctgcggag gctgccacca
      181 cccaggtact cggtcaccag gtaggcctgc ccgtcgaccc cccagtcgta gatggccacc
      241 acgtgggggt cggccaacga ggccaccaga cgggcttcgg cccggaaccg ctcgacgaac
      301 gcctggtctc cgaccagcga ggaatggagc accttgacgg ccacctggcg acccagcgac
      361 aagtcgtcgg cgaggtacac ggtgcccgag ccgccggtgc cgatgacacc acccaggcga
      421 tatcgaccac ccagcatccg gcctggcgcg ggcatggcgc cggacgggcc ggcgggggcc
      481 ccgtcggtga atccgtcggt cacccccgga ggctacccgt ccgaacgcta tggatagcct
      541 gcgcccgtga cccgacgccg tgccctcgtc atcagcgtgc tcatgggcct cggcgtgggc
      601 gtgctggtgc tggccgctct gctacccagc gaaaacctcg gcgacgtatc ggtgtcgacc
      661 aatccggccg tgtctgaact cctgcccgca cggggggaca ccgtcctgcc tcaggccaac
      721 gtgggggcca tcctcgctgc cggctgggtg ggtgagatcg tccacatcgg tggcaccgcc
      781 atccccttcg accagcagag ggtcgagaag gcgttgaact cggtgatctt ccgacccgac
      841 gccggcctgg ccctcgagcg actcccctct caggaggtat gcgccacggt gcgttactgg
      901 ccagtccgca acaccgaccg caccgccacc atcgactggt gcttccgggt cgacggctga
      961 cccgggggcg ggccccagcc aatcgtccaa ccaaccgctg gatgggccaa ctggtcagtg
     1021 ggtcagccgg gaagttgccc ggacgccagc aacaggttga acgccgcctc atcgagaacc
     1081 gggacaccga gctcctcggc cttcaccagc ttcgatccgc cgccctcacc ggcaaccaag
     1141 gcggttgtct tgaccgacac gctgcccggc gacttgccac cccgggcgac aatggccgcc
     1201 ttcgcctcgt cccgactctg accggccagt gttccggtca cgacgatggc cataccgtcg
     1261 agtacctggg caacctcgtc gcctgggtcg gtggtcggcg cctcgaggtt cacgccagcg
     1321 gaccgcagtc gacctagcag gtcgacgttg cggggttgtc ggagccattc gtgcacgctg
     1381 gccgcgatga tcgggccgag cccctcgacg gcttcgaggt cctcgacggt ggccgcctga
     1441 agcagatcga gatgtccgaa ggccgccgcc aaaagatcag ccaccgtggt cccaacgtgg
     1501 gggatcctga ggccgaaaag cagccgtccc agcggacgct cccgggaggt ctcgacggcc
     1561 cgcctcaggt tctcgaccga ggtctcgccg aagccgtccc atccggcgat ccggtcgtag
     1621 tccagggcaa acacgccggc cacgtcgttc agcaggccct cacccacgaa caggtcaacc
     1681 cgctgctcac cgaagccctc aatgtccaag gcaccccgtg acacgaagtg ttcgatgcgc
     1741 cccctgacct gtcgggggca ggcgtgattg ccacagaacg tggccgcctc gccatcgggc
     1801 cggaccagcg gttcgtcaca tgctggacac gccgtcggaa aggtccacgg cgccagtccg
     1861 tcgggtcgct ccgacaggac gggccggagt acctcgggga tgacgtcgcc cgcctttcgg
     1921 accaccacta cgtcgcccgg acggacgtcc ttgacggcca cctggtcggc gttatggagg
     1981 gttgccgcgg cgacagtcga accacccacg aacaccggct ccaggcgggc gaatggcgtg
     2041 gcctggcc
//
LOCUS       DASCMR010000174         6750 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000852214, whole genome shotgun sequence.
ACCESSION   DASCMR010000174 DASCMR010000000
VERSION     DASCMR010000174.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 6750)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6750)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6750
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000852214"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1463
                     /locus_tag="QGG16_04405"
     CDS             <1..1463
                     /locus_tag="QGG16_04405"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HJP24548.1"
                     /translation="LLATASRAWSMGPMLTVGALDALHSFADEGQKETYLPKMVTAEW
                     SGTMNLTEPQAGSDVGALTSRAVPADDGSYRIFGTKIFITFGEHEMTENIIQLVLART
                     PDSPPGTKGISLFIVPKYLVNDDGSLGERNDYRCLSVEHKLGLHASPTCVLSYGDGGD
                     GAVGFLIGEEHQGMRYMFKMMNNARLGVGVEGLAVTERALQQAADYAIERQQGRAIGA
                     PAGEQSAIVDHADVRRMLLTMRAYTDAMRCLLYLNAASLDVAARHPDSDVRQAASDRA
                     ELLTPISKAWCTDVGVEMSSLGIQVHGGYGYIEETGAAQHWRDSRISPIYEGTNGIQA
                     MDLVGRKLAMNGGAVMVDLLAEIAGLDIELAAAGETFASIRKGLADALAATEEATRWL
                     VANGLNDPNDAMAGATPYLRMFGQLVGGWLLARLALGAQRRIDAGEGDATHLGTKVVA
                     ARFYAEQLLPIARAQMGAVMAGKADLFEIPADAFSA"
     gene            1478..2290
                     /gene="lgt"
                     /locus_tag="QGG16_04410"
     CDS             1478..2290
                     /gene="lgt"
                     /locus_tag="QGG16_04410"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: protein motif:HMM:NF013915.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HJP24549.1"
                     /translation="MFASIPSPSVNSLSIGPLELQAYGLMIALGAFAAVTWSQRRYAA
                     RGGNAETIASISMWAIPAGLVGSRLYHVATDWRSFRGRWEDVPALWQGGLGIPGGLMA
                     GVLVGTLVARRRGLTMSAAMDVMVPTIPLAQAIGRWGNWFNQEVFGRPSDLPWALEID
                     AMHRPSEYAASPTFHPTFLYEGLWNVALAMVLVRVERRGVLRPGYVTGLWVCGYGLGR
                     LWVEMLRSDVASLVVGVRVNVWMALAAILIGGLVAWRGRIPADLAPMEVGDR"
     gene            2287..2844
                     /locus_tag="QGG16_04415"
     CDS             2287..2844
                     /locus_tag="QGG16_04415"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HJP24550.1"
                     /translation="MTGEMIRRPIKRIDRTFSFLDLCNFTAFTDQEGDVAAFDVVTAF
                     RAVVRQVASERGVRLAKWLGDGVMMVGVEPEDLVEAVVDIEVLIDEANSPLPMRAGIA
                     RGPVMLIGGDDYVGPAVNLASRLCDLAEAHQVLAEKGTVTPLMTNVEEQAFIRQQIKG
                     FEKGIDVVRLVPLGGDAHGSGGGPY"
     gene            2882..3148
                     /locus_tag="QGG16_04420"
     CDS             2882..3148
                     /locus_tag="QGG16_04420"
                     /inference="COORDINATES: protein motif:HMM:NF013222.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HJP24551.1"
                     /translation="MTPFETDVATVLAALCDGEVVTYGEVAAEAGHPGAHRAVGRFLR
                     DYGGHHWWRVVTSTGRLVPGHEVEQARLLAAEGVDVSDGRVRPT"
     gene            3340..4506
                     /locus_tag="QGG16_04425"
     CDS             3340..4506
                     /locus_tag="QGG16_04425"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020376938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HJP24552.1"
                     /translation="MTIQFADLGIDQDLVEVLSERGITTPFDIQSLTIPDGLAGRDVC
                     GKAKTGSGKTLAFGIPLIQRLPRGNPKRPTGLVLVPTRELAVQVCKDLEPLAEVRGLR
                     IEAIYGGTPIEKQIAALTSGVDFVVATPGRMIDLIQQEELSVVDLAGVVIDEADRMAD
                     MGFMPQVEWILRRAEKEHQTLLFSATLDGMVGALIARYQTDPVTHEVASREVTVAEME
                     HRFLTVHEMDRIRVAARIIEASKRTIVFSRTKWGADKLAAKLVDAGVDAAPIHGDLRQ
                     AQREKALADFTGGRIKCLVATDVAARGIHVDDVDVVIHYDPPSDAKTYLHRSGRTARA
                     GESGVVVSLVLWNEELEVRKLLRRLGMKQPIVEVYSNDERLDDLMAWDPAADAA"
     gene            4479..6164
                     /locus_tag="QGG16_04430"
     CDS             4479..6164
                     /locus_tag="QGG16_04430"
                     /inference="COORDINATES: protein motif:HMM:NF014442.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008170 - N-methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006306 - DNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HJP24553.1"
                     /translation="MGPGRRRSLTSHEVDDLAAVLAADLQRVDDRRERGVFFTPSDIA
                     ERLTALALVPTNGSTAGTVADPACGAGVFLLAAGRLLVDQGVADPATVVRRHLFGADI
                     DPTSVEVTRRLLATWAGIEPGQVEGVVVGDPLHHGRDVWAGCPGGGATTGFDAVVGNP
                     PFLGQLRASTVVSAADRERLRYRFPGLVAAYTDVAWLFLAAGLELLADGGRMVLIQPQ
                     SVLAARDAGPVRDLVISTARLAGIWWDRSEVFAGHAEVCAPVVERSPCRRSPRVEAPV
                     KVFVDREVVIAGRSPEPAVGETWGGVLASVLGVPPGVPSGGGTTTGGSIGTMGAVTAG
                     FRQHFYGLVAGVVERSGPDDPRPSMVTTGSVDPLHLRWGDRPCRFDGRRWQAPVVDLD
                     AVTAGDPEVGRWFAERRRPKLLVASQTAVVEVVVDQTGDLVPVTPLIVVEPDGRSREV
                     DLEVLWRLAAALSAPSITALAVRRFLGAARSSGRLRLSAAQVSDLPLPTDAGAWNEGT
                     ALARTLHRSSGAPAASDTWREFGRVMVAAYGVVDPEAAATLVDWWWSRHPARH"
     regulatory      6238..6357
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01725"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM-I-IV-variant riboswitch; SAM riboswitches
                     modulate the expression of downstream genes in response to
                     levels of S-adenosylmethionine; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF01725"
     gene            6493..>6750
                     /gene="metX"
                     /locus_tag="QGG16_04435"
     CDS             6493..>6750
                     /gene="metX"
                     /locus_tag="QGG16_04435"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020376924.1"
                     /note="Catalyzes the conversion of acetyl-CoA and
                     L-homoserine to CoA and O-acetyl-L-homoserine; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HJP24554.1"
                     /translation="MDLPGALPVHPRAYTDGLPVTGAWRHGDPVGGRRFTSVGGGRPL
                     SLESGEALSDIEVAYETWGELSPTADNAILICHALTADSHAY"
BASE COUNT         1062 a         2139 c         2325 g         1224 t
ORIGIN      
        1 aactgctcgc cacggcctca cgggcatggt ccatggggcc catgctgacc gtcggagcgc
       61 tagacgcctt gcactcgttc gctgacgagg gacagaagga gacctacctc ccgaagatgg
      121 tgaccgccga gtggtcgggg accatgaacc tgaccgagcc tcaggccggt tccgacgtcg
      181 gggcgttgac ctctcgggcc gtacctgccg acgacgggtc gtaccggatc tttggaacca
      241 agatcttcat caccttcggc gagcatgaaa tgactgagaa catcatccaa ctggtgctgg
      301 cccgcacacc cgacagcccc ccgggaacca agggaatctc gctgttcatc gttcccaagt
      361 acctcgtgaa cgacgacggc agcctcggcg agcgaaacga ctaccgatgc ttgtccgtag
      421 aacacaagct gggtctgcac gccagtccga cctgcgtcct ttcgtacggt gatgggggtg
      481 acggtgccgt tggcttcctc attggcgagg aacaccaggg catgcgctac atgttcaaga
      541 tgatgaacaa cgcccggcta ggcgtgggtg tcgaaggcct ggccgtcacc gaacgtgccc
      601 tccagcaggc tgccgactac gccattgagc gacagcaggg tcgggccatt ggtgcaccgg
      661 ccggcgagca gtcggccatc gtggaccacg ccgacgtccg tcggatgctg ctcaccatga
      721 gggcctacac cgacgccatg cgttgcctgc tgtacctcaa tgccgcatca ctcgacgtgg
      781 ccgcccgtca ccccgactcc gacgttcgtc aagcggcgtc agaccgtgct gagctgctca
      841 caccgatctc caaggcgtgg tgcaccgacg tgggcgtcga gatgtcgtcg ctgggcatcc
      901 aggtccacgg cggatacggc tacatcgaag aaaccggggc tgcccagcac tggcgcgatt
      961 cacggatctc gcctatctac gagggcacaa acgggattca ggccatggac ctggtgggtc
     1021 gcaagctagc tatgaacggt ggggccgtca tggtcgacct gctggccgag atcgccggtc
     1081 tcgacatcga gttggccgcc gccggcgaga cattcgcctc aatccgcaag ggcctagccg
     1141 atgctctggc cgccacggag gaggcaacca gatggttggt ggccaacgga ctaaacgacc
     1201 ccaacgacgc catggccgga gcgacgccgt atctccggat gttcggacaa ctggtcggcg
     1261 gatggctgct ggcccgtctg gccctgggag cacagcgtcg aatcgacgcc ggcgaaggcg
     1321 atgccaccca ccttggcacc aaggtggtgg ccgcccgctt ctacgccgaa caactcctgc
     1381 cgatagcgcg cgcacagatg ggagcggtga tggccggcaa ggccgacctg ttcgagattc
     1441 ctgctgacgc attctctgcc tgactggagg atcacaggtg tttgcctcga tccccagccc
     1501 gtcggtcaac tccctgtcca tcgggccgtt ggagttgcag gcctatgggc tgatgatcgc
     1561 cctcggggcg ttcgccgccg tgacctggag ccaacgtcgg tacgcggcgc gtggtggcaa
     1621 tgcggagacc atcgcctcga tttcgatgtg ggccattccg gcgggcctcg ttggatcccg
     1681 gctgtaccac gtggccacgg actggcggtc gttccgtgga cgatgggagg acgtgccggc
     1741 cctctggcag ggtggtctcg ggattcccgg cggcctgatg gccggtgtgc tcgtcggaac
     1801 gctggtggcc cggcggcggg ggctgaccat gtccgccgcg atggacgtga tggtgcccac
     1861 catcccgttg gcccaggcca tcggccgctg ggggaactgg ttcaaccaag aggtgttcgg
     1921 ccgtcccagt gaccttccgt gggcactcga gatcgatgcc atgcaccgac cctctgaata
     1981 cgcagcttcg ccgacctttc atccgacctt cctctacgag ggcctgtgga acgtggccct
     2041 cgccatggtg ctggtcaggg tcgaacgacg tggggtgctt cgcccggggt acgtgaccgg
     2101 tctatgggta tgtggctacg gcctgggccg actctgggtg gagatgctcc gtagcgatgt
     2161 cgcctcgctg gtggttgggg tcagggtcaa tgtctggatg gccctcgcgg ccatcctcat
     2221 cggtggtctg gtggcctggc ggggccggat tccggccgac ctagcgccca tggaggtggg
     2281 ggatcgatga ccggggagat gatccgacgc cccatcaaga ggatcgaccg cacgttctca
     2341 ttcctcgacc tgtgcaactt cacggccttc acggatcaag agggtgacgt cgcggcattc
     2401 gacgtggtga ccgcgttccg ggccgtcgta cgacaggtgg catctgaacg gggggtacga
     2461 ctcgctaagt ggttgggtga cggggtcatg atggtcggcg tcgaaccgga ggacctggtt
     2521 gaggctgtgg ttgacatcga ggtcctgatc gatgaggcga actctccgtt gcccatgcgg
     2581 gccggcatcg cccggggtcc agtcatgctc attggcggcg acgactacgt cgggccggca
     2641 gtcaatctgg catcccggct ctgcgacctc gccgaagccc accaggtgct ggccgaaaag
     2701 ggaactgtca ccccgctgat gaccaacgtc gaggaacagg cgttcattag gcagcagatc
     2761 aaggggttcg agaaggggat cgacgttgtc cggctggtgc cgttgggcgg agacgcccac
     2821 ggatccggtg gcggtccgta ctgaccacct tggagggatc cggttccatg aaccctgttc
     2881 catgacaccg tttgagaccg acgtcgccac tgtgctcgcc gcgctctgtg acggcgaggt
     2941 cgtgacctac ggtgaagttg ccgccgaggc cggccatccg ggtgctcacc gggccgtcgg
     3001 ccggttcctg cgggactacg gcgggcacca ctggtggcgt gttgtgacct caacgggtcg
     3061 gttggtgccc ggccacgagg tcgaacaggc ccgccttctg gctgccgagg gcgtggacgt
     3121 aagcgacggt cgggtccgtc ctacctgacg accggtaggt ggcgcctcga atctcagggt
     3181 tggaggcact cgccggtagg ctggcgatac ccgtcggggt ccgtcggccg cttgtacgcc
     3241 gacccctgac ggtctcgtca cccgggaaga gtggtggcgg acccgccaag gagcgggtga
     3301 cgacacggcg gcacagccgt cgggaagcac aggttcacca tgacgatcca gttcgccgat
     3361 ctgggcattg accaggacct ggtcgaagtc ctctccgagc ggggcataac caccccgttc
     3421 gatattcagt cgctgaccat ccccgacggc ctcgccggac gggatgtctg cggaaaggct
     3481 aagaccggct cgggcaagac cctggccttc ggcatcccgc tgatccagcg actgccccga
     3541 ggaaacccga agcggcctac cggcctggtc cttgtgccta ctcgcgagtt ggctgttcag
     3601 gtctgcaaag atcttgagcc cctggccgag gttcgtgggc ttcgtatcga ggccatctac
     3661 ggcggcaccc cgatcgagaa gcagattgca gcgcttacca gtggagtcga ctttgtggtc
     3721 gccaccccgg gtcgcatgat cgacctcatc cagcaggagg agctttcggt ggtcgacctg
     3781 gccggcgtcg tcatcgacga ggccgaccgc atggccgaca tggggttcat gccccaggtc
     3841 gaatggatcc ttcggcgggc cgagaaagag caccagacgc tgctcttctc agcgaccttg
     3901 gacggtatgg tcggcgcgct catcgcccga taccagaccg atccggtgac ccacgaggtg
     3961 gcgtcgcggg aggtcaccgt tgccgagatg gagcaccgct tcctcaccgt ccacgagatg
     4021 gaccggatac gggtggcggc tcggatcatt gaggcatcga agcggacgat cgtcttctcc
     4081 cgtaccaagt ggggtgccga caagttggct gcaaagcttg tggacgctgg ggtggacgcg
     4141 gcaccgattc acggcgatct ccgtcaggct cagcgggaga aggcgttagc ggacttcacc
     4201 ggcggcagga tcaagtgcct ggttgccacc gacgtggctg cccgcggcat tcacgtggat
     4261 gatgtcgatg tggtgatcca ctacgacccg ccgtccgatg ccaagacata cctccaccgg
     4321 tcgggtcgga ccgcccgggc cggcgagtcc ggcgtggtgg tcagcctcgt gctctggaac
     4381 gaggaactcg aggtccgcaa gctgctacgc cgcctcggaa tgaagcagcc gatcgtcgag
     4441 gtgtactcca acgacgagcg gctcgatgac ctgatggcgt gggacccggc cgccgacgca
     4501 gcctgacctc ccacgaggtc gatgatctgg ccgccgtcct ggcggccgac ctgcagcggg
     4561 tcgatgaccg tcgcgagcgt ggtgttttct tcacgccatc tgacatagcc gaacgactaa
     4621 cagcgctcgc gctcgttccc acgaacggtt caacagccgg cactgtggcc gacccggcgt
     4681 gtggggccgg ggtgtttctg ctggccgccg gccggcttct cgtagatcag ggggtcgctg
     4741 atccggccac cgtggttcgg cgccacctgt ttggcgccga catcgaccca acatcggttg
     4801 aggtgacccg ccgccttctg gcgacgtggg cgggcatcga gcccggtcag gttgaggggg
     4861 tggtggtcgg cgatccgctc caccacggtc gtgacgtctg ggctggatgt cccggcggag
     4921 gtgctaccac cgggttcgat gccgtggtgg gcaatcctcc gtttctgggt cagctccggg
     4981 cgtccactgt tgtgtctgcc gctgaccggg aacggctccg gtatcggttt ccgggactgg
     5041 tcgccgccta caccgacgtg gcctggttgt tcctggctgc cggtctagaa ctgttggccg
     5101 acggtggacg gatggtgctg atccagcccc agtcggtgct ggccgcccgt gatgcgggac
     5161 cggtccgtga tctcgtcatc tcgacggccc ggctggccgg gatttggtgg gaccgctcgg
     5221 aggtgttcgc tggccatgcc gaggtctgtg ccccggtggt cgaacggtct ccctgccggc
     5281 gtagcccccg cgtcgaggca cccgtgaagg tgttcgtgga tcgggaggta gtcatcgccg
     5341 gccggtcgcc ggaacccgcc gtgggtgaga cgtggggcgg agtgctggcc agtgtgctcg
     5401 gtgtacctcc gggggtgccg tccggcggcg ggactacgac gggcggctcc atcgggacca
     5461 tgggcgcggt aacagcgggt ttccggcagc acttctacgg gttggtggcc ggcgtcgtcg
     5521 agcgatccgg tccggatgac ccgcgcccgt cgatggtgac cacggggtcg gtagatcccc
     5581 tacaccttcg ttggggagat cggccctgcc gttttgacgg ccgccgttgg caggcgccgg
     5641 tggttgatct cgatgccgtg accgccggtg atcccgaggt tggacgatgg ttcgctgagc
     5701 gtcgccgacc caagctgttg gtggcttctc agaccgccgt ggtcgaggtg gttgttgacc
     5761 agacgggcga tctcgtgccc gtcaccccgc tgatcgtcgt cgagccggac ggtaggagcc
     5821 gggaggtcga cctcgaggtg ttgtggcgac tggcggcagc gttgtcggca ccgtcgatca
     5881 ccgcccttgc cgtccgccga ttcctcgggg cggcccggtc ctctggtcgg ctccggctct
     5941 cggccgccca ggtctccgac cttccgctgc cgaccgatgc tggggcctgg aacgaaggga
     6001 cggcgctagc ccgaacgctg caccgttcct ccggggcacc tgcggcttcc gatacgtggc
     6061 gggagttcgg tcgggtcatg gtcgcggcct acggcgttgt cgatccggaa gcggcggcca
     6121 cgctcgtgga ctggtggtgg tcccgccacc cggcgaggca ctgagccgtc gggcggacat
     6181 cgactggccg agatcaatgc attggcgtcc ttgcgagcca ccccgcctac actggtacga
     6241 cgacatcacg agaggcccgg ttcgccgggt ccggcaacct gggacggaca cccaaggtgc
     6301 tcgcccgtcg gagacggtgg ggatgtggcc ttgagagggg caacgaagtg tccgccggct
     6361 ggctttcgag tcacgctgtc ggcgccgagc gcgtggaagg tcctgttgga gaacggcgcc
     6421 atgacggaca aaccgaggag cgacgacgga taccccgttg acccgaccct tgagccgccc
     6481 attctccggc ccgtggacct cccaggcgct ctgccggtgc atccgcgcgc ctacacggat
     6541 gggcttccgg tcaccggagc atggcgccat ggagatccgg tcggcggacg gaggttcacc
     6601 tcggtaggtg gaggccggcc cctttcgttg gagagcggcg aggccctatc cgacatcgag
     6661 gtcgcctacg aaacatgggg tgaactgtcg ccgaccgccg acaatgccat cctcatctgt
     6721 cacgccctga ccgccgacag ccacgcctac
//
LOCUS       DASCMR010000175         1953 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000858223, whole genome shotgun sequence.
ACCESSION   DASCMR010000175 DASCMR010000000
VERSION     DASCMR010000175.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1953)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1953)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1953
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000858223"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1575)
                     /locus_tag="QGG16_04440"
     CDS             complement(<1..1575)
                     /locus_tag="QGG16_04440"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJP24555.1"
                     /translation="MTDANPLTLSETRGPSEPPLRDLTIGGLLREVAAQVPDRRALVA
                     GVPDPAGRREWTYADLLADAERAARALRVRFEPGERVALWAPNVPQWVVLEFACGMAG
                     VILVTINPAYQARELQYVLTQSRAAGLILLPEFRGNPMLGTALDVQSECPELREVIRL
                     DEWKDFLASGDVWDGELPDPDPMDPCMIQYTSGTTGFPKGALLHHRGLVNNGAHTGDR
                     VGVTEGAVYVLTMPLFHTGGCVLGVLTAVSMKMTMVLVEAFDPGLVLELIEAYDGAAM
                     LGVPTMLVAMLEHPDFAIRDLSAIEAICSGGSTVPAALVERLERELKAPFTIVFGQTE
                     LSPVSSMTHTTDTIEDKASTIGNAMPHVEVKIIDPETGETVPPGTVGEYCARGYLVMH
                     GYYEMPDATAETIDADGWLHTGDLAAMDERGYLTIECRLKDMIIRGGENIYPKELEEL
                     LFAHPTVGEVAVVGLPDDKWGEVVSAFVRPAPGQAVDRNELFAYLRGHLAPHKTPRHW
                     FEVDEYPLTGSGKIQKF"
     gene            1665..>1953
                     /locus_tag="QGG16_04445"
     CDS             1665..>1953
                     /locus_tag="QGG16_04445"
                     /inference="COORDINATES: protein motif:HMM:NF012334.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HJP24556.1"
                     /translation="MGALDGKSIVVTGASSGIGEAIARRMVAEGARVVVGSRSEPSVD
                     GAVWVPTDVTDPVAVDALVAAAVDAYGGLDVMVANAGVQIAKTVADTTDAEF"
BASE COUNT          314 a          623 c          698 g          318 t
ORIGIN      
        1 gaatttctgg attttgccgc tgccagttag cgggtactcg tcgacctcga accagtggcg
       61 gggcgtcttg tgaggtgcca gatgcccccg caggtaggcg aacagctcgt tacggtcgac
      121 ggcctggccg ggggccggcc gcacgaaggc cgacaccacc tctccccact tgtcgtcagg
      181 caggcccacc acggctactt ctcccaccgt ggggtgggcg aacagcaact cctcgagctc
      241 cttgggatag atgttctcgc cgcctcggat gatcatgtcc ttgagccgac actcgatggt
      301 caggtagccc cgctcgtcca tggccgctag gtcgccggtg tgcagccacc cgtcggcgtc
      361 gatcgtttca gcggtggcat cgggcatctc gtagtagccg tgcatgacca gataaccgcg
      421 ggcgcagtac tcaccgaccg tgcctggggg caccgtctcg ccggtctccg ggtcgatgat
      481 cttgacctcc acgtggggca tggcgttgcc gatggtcgac gccttgtcct cgatggtgtc
      541 cgtggtgtgg gtcatcgacg acaccggcga caactcggtc tggccgaaca cgatggtgaa
      601 cggagccttc agttcccgct cgaggcgttc cacgagcgcc gcgggcaccg tggagccgcc
      661 ggagcagatg gcctcgatgg ccgacaggtc gcggatggcg aagtccgggt gttcgagcat
      721 cgccacgagc atggtgggta cgcccagcat ggccgccccg tcgtaggcct cgatgagttc
      781 cagcacgagg cccgggtcga aggcctcgac cagaaccatg gtcatcttca tcgacaccgc
      841 ggtgaggacc ccgagcacgc acccaccggt atggaacagc ggcatggtca ggacgtagac
      901 ggcgccctcg gtgaccccga cccggtcgcc ggtgtgggca ccgttgttga ccaggccccg
      961 atggtgcagc agggcaccct tggggaagcc ggtggtgccc gacgtgtact ggatcatgca
     1021 ggggtccatc gggtcggggt cgggcagctc gccgtcccag acatcgcccg aagccaggaa
     1081 gtccttccac tcgtctaggc ggatgacctc gcgcagttcg gggcactccg actgcacgtc
     1141 gagggctgtg cccagcatcg ggttgccccg gaactcgggg agcaagatca gccctgccgc
     1201 ccgggactgg gtcaggacgt actgcagttc ccgggcctgg taggccgggt tgatggttac
     1261 caggatcacc cctgccatgc cgcaggcaaa ctccaacacc acccactggg gcacgttggg
     1321 agcccaaagt gccactcgct ccccaggctc gaagcggacc cgcagggcac gggccgcccg
     1381 ttcggcgtca gccaacaaat cggcgtaggt ccactcgcgg cggccggcgg gatcgggcac
     1441 gccggccacc agggcccgcc ggtcggggac ctgggcggcc acctcacgaa gcaacccgcc
     1501 gatagtcaag tcgcgtaacg gcggttcgga ggggccgcgg gtctcggaga gggtgagggg
     1561 gttggcatcg gtcatgaacg gtgaccgtac tgtggaggcc gcggctggtt cgtgggcggg
     1621 gctacattcc gcggagttgc agcactgaga cagggggaat gcctgtgggg gcactggacg
     1681 gaaagtcgat cgtggtcaca ggggccagca gcggcatcgg cgaggccatt gcccgccgga
     1741 tggttgccga gggggcccgg gtcgtggtgg gcagtcggtc ggaaccgtcg gtggacggtg
     1801 cggtctgggt gccgaccgac gtcaccgatc cggtggccgt cgatgcgctg gtcgccgcgg
     1861 cagtcgacgc ctacgggggc ctcgacgtga tggtggccaa tgccggggtc cagattgcga
     1921 agacggtggc cgacaccacc gacgcagagt tcg
//
LOCUS       DASCMR010000176         2660 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000861388, whole genome shotgun sequence.
ACCESSION   DASCMR010000176 DASCMR010000000
VERSION     DASCMR010000176.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2660)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2660)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2660
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000861388"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(21..554)
                     /locus_tag="QGG16_04450"
     CDS             complement(21..554)
                     /locus_tag="QGG16_04450"
                     /inference="COORDINATES: protein motif:HMM:NF016001.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase/quinone reductase family protein"
                     /protein_id="HJP24557.1"
                     /translation="MGAVSDLGLEVKPANVFQRLVQAVGSSRPGAWLFSKTLYQPDKA
                     LFKATGGRLTIPALVAGLPVIMVTTTGAKTGKRRTMPLLGIPVGEDLAVIGSNYGQKH
                     TPSWVYNLEADPSATIGYRDSTVEVVAHRADETETDRIFDLASTVYPGYAKYRKRAEH
                     RVIQVFVLKTDTQGVAL"
     gene            647..802
                     /locus_tag="QGG16_04455"
     CDS             647..802
                     /locus_tag="QGG16_04455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24558.1"
                     /translation="MSDGNEPLVGLPMFPGSPMREYFCQVAEFSPGVAVSTLRTPSSY
                     EAWGPLA"
     gene            complement(924..1574)
                     /locus_tag="QGG16_04460"
     CDS             complement(924..1574)
                     /locus_tag="QGG16_04460"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025953.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HJP24559.1"
                     /translation="MVGLRATAWSVAGAAVRWAAAIAGRAAAVGPDHRMARNFGGFGG
                     GSILGWPTGPVFGERWIWIGSDTLIAPHVTLSAGMATWEATSIEPAVRIGDRCLIGRG
                     TAIVGHLAIDIGDDVYTGMNVYITDQNHGYEDLTLPIGVQAPSEKPVTIGPGSWIGSG
                     AVILPGARIGAHVVVGANSVVRGEIPDHSVVVGVPGRVVRRHDGTGWRRVGEALDL"
     gene            1922..>2660
                     /locus_tag="QGG16_04465"
     CDS             1922..>2660
                     /locus_tag="QGG16_04465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJP24560.1"
                     /translation="MADREPLAFDRPEWHAQVDEEIVDPEQEIVDPHHHLWQIPGADY
                     VLENLWADTGSGHRVTRTVFIECHAEYRDDGPEHLRPVGETEFVAGLATESMAGPGAR
                     IAGIVAYADLRLGDLLPEVLDAHVTAGNGLFRGIRHAISHPTHPEVLTIPGRAPSGLA
                     ANEGFRSGVRLLGRHGYTYESWHYHYQLPDFVDLARSAPDTTIILDHFGTPLGVGPWA
                     NQRDEIFEQWKIDIAEAARCPNVVAKLG"
BASE COUNT          488 a          887 c          775 g          510 t
ORIGIN      
        1 gtgaaccttg accagggcgg ctagagggcc actccctgag tgtccgtctt gaggacgaac
       61 acctgaataa cgcgatgttc ggccctcttg cggtacttcg cgtaaccggg gtagacggtg
      121 ctggctagat caaagatccg gtccgtttcg gtttcgtctg ctcgatgggc caccacttcc
      181 actgtggagt ctcggtatcc gatagttgcc gacggatcgg cttcgaggtt gtacacccag
      241 ctcggcgtgt gcttctggcc gtagttggat ccgatcaccg ccaggtcttc tcccaccgga
      301 atgccgagaa gcggcatggt tcggcgtttc ccggtcttcg ccccagttgt agtcaccatt
      361 atcaccggca gtccagcgac gagggccggg atggtcaaac ggcctccagt ggccttgaac
      421 aacgccttgt ccggctggta gagggttttg gaaaacagcc acgcccctgg ccgactcgat
      481 cccaccgcct ggacgagccg ttgaaaaacg ttggccggtt tcacttcgag tcctaaatcg
      541 cttactgcac ccatttctca cctcctgtca acaagttaac catcaggtgc taccgccaac
      601 ccttctcatg acgtcaccgg aagcttggac ccgctgaatg ttgtccatga gcgacggcaa
      661 cgaaccactc gtcggcctcc caatgttccc gggttcgccg atgcgcgaat acttctgcca
      721 agttgccgag ttcagcccag gtgtcgctgt gtcgacgttg agaacaccgt cttcctacga
      781 ggcatggggg cccctcgcct aggaccggtg tctgtagtcg gtcagcccga cctccagttg
      841 gacgaccaga tgaacaagac aaatgcactg cggttcgatt tcgactttca tggtgttgga
      901 ctcgaccccg aacgacagtc ccttcagagg tcgagggctt ccccaacgcg ccgccaccca
      961 gtgccgtcgt ggcgtcgtac cactcgacca gggacgccga ccaccactga gtggtcgggg
     1021 atttcaccgc ggaccaccga gttggccccg acgacgacgt gagcaccgat tcgcgcccct
     1081 gggaggatca ctgcgccgga cccgatccag cttcccgggc caatggttac cggcttttca
     1141 gagggcgctt gcaccccgat cgggagggtt agatcttcgt aaccgtggtt ctggtcggtg
     1201 atgtagacat tcattcccgt gtacacgtcg tcgccgatgt cgatagccaa atgcccgaca
     1261 atcgccgtgc cccgcccgat aagacatcgg tcaccaatac gaaccgctgg ctcgatagag
     1321 gtggcctccc aggtagccat tccggccgac agcgtcacgt gcggggcgat cagagtgtca
     1381 ctcccaatcc agatccaccg ctcgccgaac accggtccgg tcggccaccc aaggatgctg
     1441 ccgccaccga acccgccaaa gtttcgggcc atccggtggt cggggcctac cgcggcggcc
     1501 ctgccggcaa tggccgccgc ccatcgaacc gctgctcccg ccactgacca agcagtcgcc
     1561 ctgagtccca ccatgcctgg aacctagatg cgattagggc cggccggttt cgagccgtcc
     1621 ggcttttcag cttctttccc tgatccgttg ccgttgtcaa ctccaggggt atctggaatc
     1681 ccctaaccgc ctttggggcg atcaccctct cagcggtgaa actcaacggt aagagtggtg
     1741 tgcaccacgc caatgtcggc gagcaaccgt tccactgcgg cagccatcgg cgagagacgc
     1801 agcactccgg ccgaggcagt gagggcaagg cgaagaccgt gtgatccggt ctctaggtgg
     1861 gctcctccct gacgatcact tcaggattca gccttaccgt ccgaggctag attcggtaac
     1921 catggcagac cgcgagcccc tcgccttcga ccggcccgag tggcatgccc aggtcgatga
     1981 ggagatcgtt gatcctgaac aggagatcgt cgacccccac caccacctgt ggcagatccc
     2041 cggcgccgac tacgtgctgg agaacctttg ggccgatacc ggatcgggtc atcgggtcac
     2101 caggaccgtc ttcatcgaat gccacgccga gtaccgcgac gacgggccgg aacacctccg
     2161 tccagtcggc gagactgagt tcgtggccgg tctggctacc gagagcatgg cgggaccggg
     2221 tgcacgtatc gccggcatcg tggcctacgc cgacctgcgc ctaggggatc tactgcctga
     2281 ggtgctcgat gcccacgtga cagccggcaa cggtctattc cgggggatcc gtcacgccat
     2341 ctcgcacccc acccaccccg aggtgctaac tattcccggg cgagcaccgt cggggctggc
     2401 cgccaacgag gggttccgga gcggtgttcg cctgctgggc cgccacgggt acacctatga
     2461 gagttggcac taccactacc aactcccgga cttcgtcgat ctggcccgtt cagctcccga
     2521 caccacgatc atcctcgacc acttcggcac cccgttgggt gtcggcccct gggcgaatca
     2581 gcgcgacgag atcttcgagc agtggaagat cgacattgcc gaggcagccc gctgccccaa
     2641 cgtggtcgcc aagctgggtg
//
LOCUS       DASCMR010000177         3971 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000866429, whole genome shotgun sequence.
ACCESSION   DASCMR010000177 DASCMR010000000
VERSION     DASCMR010000177.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3971)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3971)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3971
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000866429"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..351
                     /locus_tag="QGG16_04470"
     CDS             <1..351
                     /locus_tag="QGG16_04470"
                     /inference="COORDINATES: protein motif:HMM:NF012412.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24561.1"
                     /translation="IYLLRMQSERITEGLIPSMREYATDFGLSVERAARLPDDALILH
                     PGPTNPGVEISAAAAADQRSVILDQVVHGVSVRMAVLFLLLGSGRTPAPTGSSETGIS
                     ATSGSASDDEGVRP"
     gene            348..1640
                     /locus_tag="QGG16_04475"
     CDS             348..1640
                     /locus_tag="QGG16_04475"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004151 - dihydroorotase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HJP24562.1"
                     /translation="MSVVLRGGRIIDADGERTLDVEISEDGTIAAVGTGLIGDLDLDA
                     SGCVVSPGFVDLHAHLREPGQEEAETIETGARGGSLGGYTALVAMPNTDPTTDCVAVV
                     EQVRALGRRSTCEIVPSAAMTVDRAGTDMAPMGELVDAGVGIFTDDGTGLQDPRLMRR
                     VMEYSTGLTRRLGRPVMLAQHCEVSALSAGGYMHEGEWSSRLGIPGQPAEAEELMVMR
                     DIALVRLTGAHLHFQHLSTASSVAMVRGAKAAGLPVTAEATTHHFTLTDAACATYDPV
                     FKVHPPLRTDADVAAIRAGLADGTIDAVATDHAPHAPHAKERTFDEAPPGMLGLETAF
                     ALTLSESGLDLPEVLAVLSWRPAAIAGIADRHGVSVVPGAPANLCVVDPDETWTVSGA
                     AMASRSSNTPYEGDTLRGRVRHTIRAGELVVVDGEAQR"
     gene            1637..2797
                     /gene="carA"
                     /locus_tag="QGG16_04480"
     CDS             1637..2797
                     /gene="carA"
                     /locus_tag="QGG16_04480"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005951 - carbamoyl-phosphate synthase
                     complex [Evidence IEA];
                     GO_function: GO:0004088 - carbamoyl-phosphate synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HJP24563.1"
                     /translation="MSESTHEPHRNRRHRPPEAALVLADGEVFEGEAIGAAPPNGVAS
                     GEVVFNTVLSGYQEVITDPSYAGQIITFTASHLGNYGVSPHDNENRRPFCRGVVVRDL
                     ARRRSNWRAEDDLDGLLRTHGVAGITGIDTRRLTRHLRDAGAMPGAFGTADLATLTAA
                     ANVEPGTDGLDLVSTVTCDAPTTVASTGGGRRIVAFDFGIKATIIRHLAGLGEVTIVP
                     ASTSASDVLAMEPDGVFLSNGPGDPGPLADVRTQIGVLLGEVPVFGICLGHQLLAGTI
                     GAETYKLPFGHHGGNHPVRNLATGAVEITSQNHNYCVAEGSIPTAELTHVNLNDQTVE
                     GIRCLDVPAFSVQYHPEAGPGPHDSRYLFDEFEDLMARVRGTASVASPGGAA"
     gene            2797..>3971
                     /gene="carB"
                     /locus_tag="QGG16_04485"
     CDS             2797..>3971
                     /gene="carB"
                     /locus_tag="QGG16_04485"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HJP24564.1"
                     /translation="MPRRNDIESILLIGSGPIVIGQACEFDYSGTQACRVLREEGYRV
                     ILANSNPATIMTDPDFADATYVEPLRLDVLEAIIARERPDALLPTLGGQTALNLSMEL
                     VEAGVLDRYDVELIGADADAIATAEDRERFKVAMQEIGLAVPPSGVAHEMDEARAVVA
                     ELGLPVVIRPAYILGGRGTGIASTAEEFETVAANGIAASPISEILIEKSIAGWKEYEL
                     EVMRDRADNCVVICSIENVDPMGVHTGDSITVAPAQTLSDVEYQEMRDAAFACLRRVG
                     VETGGSNVQFAVDPATGQQVIIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDE
                     IPNDITKKTPAAFEPTIDYVVTKIPRFTFEKFPSTKPLLTTSMKSVGEAMAIGRTFQ"
BASE COUNT          717 a         1361 c         1278 g          615 t
ORIGIN      
        1 atctacctcc tacggatgca gagcgaacgc atcaccgagg ggctgattcc gtcaatgcgc
       61 gagtacgcca cggactttgg actctcggtc gaacgagcgg cccgcctacc tgacgatgcc
      121 ctgatcctgc atcccggtcc gaccaatccc ggagtcgaga tttctgcggc cgccgcggcc
      181 gaccaacgat cggtgatcct cgaccaggtg gtccacgggg tgtcggtccg catggcggtc
      241 ctgttcctgc tcctgggctc gggccgaacc ccagcaccga ccggtagttc agagaccggt
      301 atttcagcaa ctagcggttc agcatctgac gacgaagggg ttcgaccatg agcgtcgtgc
      361 tgcgaggcgg ccgcatcatc gacgccgatg gcgaacggac cctcgacgtc gaaatcagcg
      421 aggacggaac gatcgccgca gtcggcaccg ggttgattgg cgacctcgac ctcgacgcat
      481 cggggtgcgt agtttccccc ggcttcgtcg acctccacgc ccacctccgt gagccgggcc
      541 aggaagaggc cgagaccatc gagaccggcg caaggggtgg atcgctcggt ggctacacgg
      601 cactggtggc catgcccaac accgatccga ccaccgactg cgtggccgtg gtcgaacagg
      661 tccgggccct cgggcggcgg tcaacgtgcg agatagtgcc gtcggcggcc atgacggtgg
      721 atcgggcggg caccgacatg gcgcccatgg gcgagttggt ggacgccggg gttgggatct
      781 tcaccgacga cggcaccggc ctccaggacc cccgcctcat gcggcgggtc atggaataca
      841 gcaccggtct cactcgccgc ctgggtcgac cggtgatgct ggcccagcac tgcgaggtat
      901 cggccctgtc ggccggcggc tacatgcacg aaggggagtg gtcgtcgcgg ctgggcattc
      961 ccggccaacc ggcggaggcc gaagaactaa tggtgatgcg agacatcgcc ctggttcgac
     1021 tcaccggtgc ccacctgcac ttccaacacc tctccacggc cagttcggtg gccatggtgc
     1081 gtggcgccaa ggcggccggc cttccggtga ccgccgaggc gaccacccac cacttcaccc
     1141 tcaccgatgc ggcgtgcgcc acctacgacc cggtgttcaa ggttcacccg ccgctgcgga
     1201 ccgatgccga cgttgccgcc atccgggccg gcctcgccga cgggaccatc gatgcggtgg
     1261 ccaccgacca cgcaccgcac gcaccgcacg ccaaggagcg aaccttcgac gaggcccccc
     1321 caggaatgct gggcctggag acggcctttg ccctcaccct gagcgagtca ggactagacc
     1381 ttcccgaagt actagctgtt ctctcatgga ggccagcggc cattgccggc atcgcggatc
     1441 ggcacggcgt gtcggtggta cccggtgccc cggcgaacct ctgtgtcgtc gaccccgatg
     1501 agacatggac ggtgtccgga gcggcgatgg ccagccggag cagcaacacc ccctacgagg
     1561 gggacaccct gcgggggcgg gtacgccaca ccattcgcgc cggtgagctg gtcgtggtcg
     1621 atggagaggc ccaacgttga gcgaatccac ccacgaaccg catcggaacc gtcggcatcg
     1681 cccccccgaa gcggccctgg tgctggccga cggtgaggtc ttcgagggtg aggcaatcgg
     1741 tgccgcaccg cccaacggcg tggccagcgg tgaggtcgtg ttcaacacgg tgttgtcggg
     1801 gtaccaggag gtcatcaccg acccgtccta cgccggtcag atcatcacct tcacggcctc
     1861 gcatctaggg aactacgggg tcagccccca cgacaacgag aaccggcgac cgttctgtcg
     1921 tggtgtggtc gtccgtgacc tagccagacg tcgcagcaac tggcgggccg aggacgacct
     1981 cgacggactg cttcggaccc atggcgtggc gggtatcacc ggaatcgaca cccggcgcct
     2041 cacccgccac ctgcgcgacg cgggcgccat gccgggcgcc ttcggaacgg cggacctggc
     2101 cacgctcaca gcggcagcga acgtcgaacc gggcaccgac ggcctcgacc tggtgtcgac
     2161 ggtgacctgc gacgcgccga ccaccgtggc gtcgaccggt ggtggtcgac gcattgtcgc
     2221 cttcgacttc ggcatcaagg ccaccatcat ccggcatctg gcagggctag gagaggtcac
     2281 gatcgtgccg gcgtccacgt cggcgtccga cgtcctagcc atggagcccg acggcgtgtt
     2341 cctctccaac ggtcccggcg acccgggccc cctggccgac gtccgcaccc agatcggcgt
     2401 ccttctcggc gaggtgccgg tgttcgggat ctgcctcgga caccagttgc tagccggaac
     2461 catcggcgcc gagacctaca aactcccgtt cggccaccac ggaggcaatc acccggtgcg
     2521 gaacctggcc accggagccg tcgagatcac cagtcagaac cacaactact gcgtggccga
     2581 gggatccatc cccaccgccg aactaacgca tgtgaacctc aacgaccaga ccgtggaggg
     2641 catccgctgc ctggacgtgc cggcgttcag cgtccagtac caccccgaag ccggcccagg
     2701 cccgcacgac agccggtatc tcttcgatga gttcgaggac ctgatggcac gagttcgggg
     2761 tacggcgtcg gtggcctcac cgggaggggc agcctgatgc cccgccgcaa tgacatcgag
     2821 agcatcctgc tgatcggctc ggggccgatc gtgattggtc aggcgtgcga gttcgactac
     2881 tcgggaaccc aggcctgtcg cgttcttcgc gaggagggct accgggtcat cctcgccaac
     2941 tcgaacccgg cgacgatcat gaccgacccg gactttgccg atgccaccta cgtggaacct
     3001 ctacgactcg acgtgctgga ggccatcatc gccagggagc gacctgatgc tctcctaccc
     3061 accctgggcg gacagacggc attgaacctc tctatggaac tggtcgaagc cggtgtgctg
     3121 gaccgctacg acgtggagct catcggcgcc gacgccgacg ccatcgccac ggccgaggat
     3181 cgggagcgat tcaaggtggc catgcaagag atcggactcg ccgtgccgcc ctccggcgtg
     3241 gcccacgaga tggacgaggc ccgagccgta gttgccgagc tcggactacc agtagtcatc
     3301 cggcccgcct acatcctggg cggccggggg acgggcatcg cgtcaaccgc cgaagagttc
     3361 gaaacggtgg cggccaacgg catcgcggcc agccccatct ccgagatcct gatcgagaag
     3421 tcgatcgccg gctggaagga atacgaactc gaggtgatgc gggaccgcgc cgacaactgc
     3481 gtggtcatct gttcgatcga gaacgtggac ccaatggggg tacacaccgg tgattcgatc
     3541 accgtggcgc ccgcccagac cctcagcgac gtcgagtacc aggagatgcg ggacgcagcg
     3601 ttcgcctgcc tacgtcgggt cggtgtcgag accggcggat caaacgtgca gttcgccgtt
     3661 gatccggcca ccggccaaca ggtcatcatc gagatgaatc ctcgggtgag tcgatcctcc
     3721 gcgctggcgt cgaaggccac cggtttcccg atcgccaaga ttgccgccaa gctggccgtc
     3781 ggatacacgc tcgacgagat tcccaacgac atcacgaaga agacgccggc cgccttcgag
     3841 ccgaccatcg actacgtggt caccaagatc ccgcgcttca cgttcgagaa gttccccagc
     3901 acgaagccgt tgctcaccac atcgatgaaa tcggtaggcg aagccatggc catcggacgc
     3961 acgtttcagg a
//
LOCUS       DASCMR010000178         2069 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000873190, whole genome shotgun sequence.
ACCESSION   DASCMR010000178 DASCMR010000000
VERSION     DASCMR010000178.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2069)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2069)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000873190"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            162..1646
                     /locus_tag="QGG16_04490"
     CDS             162..1646
                     /locus_tag="QGG16_04490"
                     /inference="COORDINATES: protein motif:HMM:NF040160.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5719 family protein"
                     /protein_id="HJP24565.1"
                     /translation="MNATRGPAILVLAAMTAAAAALSSGPVEVSGAEARPEARAATTL
                     DSSSTALWFCTGPTAELDGIDERTVEVVGISASPTEGRVTVVDEAGRAVERAFRIDPG
                     DRLRISPGQFVSGAMFAGVTVEVRGGAAVVGQTVAGPDGADRRPCTTRASDTWVVPWS
                     TTARPGNRAWVLLHNPFRAAAVADLRFVGDIGRRETLDSQGVVVPGRSIVAYDVTERI
                     ADSAVVSATIDVRVGRVVVARLQASDGSGPLATRGLDLAPGVPELATRAFIPGVGTGA
                     VSTGSPGAGTSVVVVNTGVEAVEAEVVVRTGEEVTGLEPWRLVLRAGQRHVVDLDAGR
                     LEGTDAFGVEVRTLDGRPIAASVVQRFGGDGVSEASSSVEGGLAVRPAAVVAARGWVV
                     DLNDRYGATADVLAVMNPASEGIATIEVKVLAGTAPAGVARSVELAPGTQVSFDLAGG
                     PPAVLAVESTAPVIVSIHSRTGEGATASFAVAVAGTEARPVPSN"
     gene            complement(1727..>2069)
                     /locus_tag="QGG16_04495"
     CDS             complement(1727..>2069)
                     /locus_tag="QGG16_04495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24566.1"
                     /translation="VPEQLDRDDFEQPDVAWLVAVFTSATCDSCESVMATASPLASAE
                     VAVQEVEVGTHRAIHDRYAVDAVPMVLIADALGVVRDHHMGPVSATHLWGSLAELRNP
                     GSTPDGCSAGS"
BASE COUNT          285 a          630 c          802 g          352 t
ORIGIN      
        1 agggtggccg ccgggagcat ggccatgttc gaggtcgacg atgccgggct agcccggcgt
       61 cgccagatcc agctggcact ggtcgccgtg ttggtgctcc tggccagttg ggctcgcacg
      121 tcccgggact cgaagcgacg acagcagcgg gcggggatcc gatgaacgcc acccggggtc
      181 cggccatcct ggtgctggct gccatgacgg ctgcggcggc cgcgctctct tccggaccgg
      241 tcgaggtgtc aggcgccgag gcccgccctg aggcccgagc cgccacgacc ctcgacagtt
      301 cctcgacggc cctctggttc tgtaccgggc cgaccgctga actggacggg atcgatgagc
      361 ggaccgtcga ggtggtgggg atctcggctt cacccaccga gggtcgggtg acggtggtgg
      421 acgaagccgg tcgggccgtg gagcgggcct tcaggatcga tccgggagac cgcctcagga
      481 tctcgcccgg ccagttcgtc tccggggcga tgttcgccgg tgtcaccgtc gaggtcaggg
      541 gtggtgccgc cgtggtaggc cagacggtgg ccggtccgga cggagcggat cgtcggccat
      601 gcacgaccag ggcttctgat acctgggtgg tgccctggtc gaccacggcc cggcccggaa
      661 atcgtgcctg ggtgctgctc cacaatccgt tccgagccgc agcggtggcc gatctacggt
      721 tcgtcggcga catcggtcgc cgcgagactt tggactccca gggcgtcgtg gtgcccggcc
      781 gttccattgt ggcctacgac gtgacggagc ggatcgccga ttccgcggtc gtttcggcca
      841 ccatcgacgt ccgcgtgggt cgggtggtgg tcgctcgact ccaggcgtcg gacgggtcgg
      901 gccccctggc cacccggggt ctggacctgg ctcccggggt gccggagctc gccacccggg
      961 cattcattcc cggggtcggc acgggagcgg tgtcgaccgg aagcccgggt gccggtacgt
     1021 cggtggtggt cgtcaacacg ggcgtggagg ccgttgaggc cgaggtggtg gtccggaccg
     1081 gtgaagaggt gaccggcctg gagccgtggc gtctggtgct gagggccggc cagcgccacg
     1141 tggtggacct cgatgccggt cgtctcgagg ggactgacgc cttcggggtg gaagtgagga
     1201 cgctggacgg tcgcccgatc gccgcttcgg tggtgcagcg gttcggaggt gacggtgtct
     1261 cagaggccag tagttcagta gagggcggcc tggcggtacg gccggcggct gtcgtggcgg
     1321 ctcgagggtg ggtggtggat ctcaatgatc ggtacggggc caccgctgat gtcctcgccg
     1381 tcatgaatcc agccagcgag ggaatcgcca ccatcgaggt gaaggttctg gccgggacag
     1441 caccggctgg tgtggcgcgt tcggtggagt tggcgcccgg gacgcaggtc tcgttcgatc
     1501 tggcgggcgg accaccggcg gttctggccg tggagtccac ggcgccggtc attgtctcta
     1561 tccacagcag gacaggtgag ggagcaaccg cttctttcgc agtggcggtc gccgggaccg
     1621 aggcccggcc cgttcccagc aactgagggc cggtttcaga aggcttgttt cggaaggccc
     1681 gtttcggaag aactgttctg gaaggctggt cgacaggatg gcgggttcag gagccggcgc
     1741 tgcagccgtc gggcgtggag cccggatttc gtagctcagc caacgagccc cagaggtggg
     1801 tggcgctgac cgggcccatg tggtggtcgc ggaccacgcc gagggcatcg gcgatcagca
     1861 ccatgggcac ggcgtcgacg gcataccggt cgtggatggc ccggtgggtt ccgacctcca
     1921 cctcttgaac ggcgacctcg gcgctagcca ggggagaagc ggtggccatc accgattcgc
     1981 acgagtcgca ggtagccgag gtgaacacgg cgaccagcca ggccacgtcg ggttgctcaa
     2041 agtcgtcgcg gtcgagttgt tcgggaacc
//
LOCUS       DASCMR010000179         1748 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000880559, whole genome shotgun sequence.
ACCESSION   DASCMR010000179 DASCMR010000000
VERSION     DASCMR010000179.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1748)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1748)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1748
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000880559"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..994
                     /locus_tag="QGG16_04500"
     CDS             <1..994
                     /locus_tag="QGG16_04500"
                     /inference="COORDINATES: protein motif:HMM:NF014516.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HJP24567.1"
                     /translation="RQLVEAIDVRMALVDARLQVLREHRRQQSERVRAVAARLDGLRR
                     ERTEAETALREIRERQSRLEIERAETRMRIENVTATIRVEFDREPEAAIEAPCPVLPD
                     GILAAARIAELERELKLMGPINPLALTEFDSLKERHEFLQEQLDDIRSTRKELRKVIR
                     SVDEEIVSVFAAAYAEVSGHFTDLFESLFPGGQGRLRLTDPDDLLETGLEVEARPSGK
                     NVKKLSLLSGGERSLTALAFLFAVFRSRPSPFYVMDEVEAALDDVNLHRFLGLVDQFR
                     NDAQLVIVSHQKRTMEAADCLYGVSMAPGGSSKVVSERVEAARVAERLGVLTNG"
     gene            1084..>1748
                     /locus_tag="QGG16_04505"
     CDS             1084..>1748
                     /locus_tag="QGG16_04505"
                     /inference="COORDINATES: protein motif:HMM:NF012301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HJP24568.1"
                     /translation="MRILVVDDEADLLDALSRGLRREGYAVDTADNGEEALAKASWTP
                     YDLICLDLTMPGIDGLEVCERLRADPPDEVVPRILMLTARDTLEDRIRGLDVGADDYL
                     VKPFAFDELSARIRSLLRRDPGRSGAVLEVGDVVVDTARHHARRGGRDLALTAKEFAV
                     LRYFMTRPGEVISQEQLLDHVWDEHADPFTNTVRVTVGTLRRKLTVGDEDPALETVVG
                     SGYR"
BASE COUNT          280 a          562 c          595 g          311 t
ORIGIN      
        1 ccgtcaactg gtcgaggcca ttgacgtccg aatggccctg gtcgacgccc gactccaggt
       61 gctacgggag catcgtcgcc aacagtccga gcgggtccgg gccgtggccg cccgactgga
      121 cggtctccgt cgagagcgaa ccgaggccga gaccgctctc cgagagatca gggaacgtca
      181 gtcccggctc gagatcgagc gggccgagac ccggatgcgg atcgagaacg ttacggccac
      241 cattcgtgtc gagttcgatc gggagcccga ggcggccatc gaggcaccat gcccggtgct
      301 gcccgacgga atcctggccg cggcccggat cgccgagctg gagcgggaac tcaagctcat
      361 gggacccatc aacccattgg ccctgaccga gtttgattcc ctgaaggagc gacacgagtt
      421 cctccaggag cagctggacg acatccggtc cacccgcaag gaactccgca aggtcatccg
      481 ctcggtggac gaggagatcg tctcggtatt cgccgcggcc tatgcggagg tgtccggcca
      541 tttcaccgat ctattcgagt cgttgttccc gggcggacag ggtcgccttc gcctcactga
      601 tcccgatgac cttctggaga ccgggctgga ggtcgaggca cgtccgtcgg gcaagaacgt
      661 caagaagctc tcgctgctgt cgggtggtga acggtcgctg accgcgctgg ccttcctgtt
      721 cgccgtgttc cgtagtcgtc cgtcgccctt ctacgtgatg gacgaggtcg aggcggcgct
      781 cgacgacgtc aacctccacc gcttcctcgg actggtcgac cagttccgta acgacgcgca
      841 gttggtgatc gtgagccacc agaagcgcac aatggaggcc gcggactgcc tgtacggggt
      901 atccatggct cccggtggct cctcgaaggt ggtcagcgaa cgggtcgagg cggcccgcgt
      961 agccgaacgc ctcggcgtcc tcaccaacgg ctgaccgacc cacggtggcc tgctcccggg
     1021 cccggcgccc gagcgagaca cccgcggccc ggcaccggtg ggtctcggag taccgtcgtt
     1081 gacgtgcgca tcctcgtggt cgatgacgag gccgatctgc tcgacgctct gtcccgtggt
     1141 ctccgccgcg agggctacgc ggtggacacg gccgacaacg gtgaggaggc gctggccaag
     1201 gcctcgtgga cgccgtacga cctgatctgc ctggacctga ccatgcccgg cattgatggg
     1261 ctcgaggtct gcgaacgcct acgggccgat ccgcctgacg aggtggtgcc tcggatactg
     1321 atgttgacgg cccgcgacac tctggaggac cgcattcgtg gtctcgacgt gggggccgac
     1381 gactacctgg ttaagccctt cgccttcgac gagctctcgg cgcgtatccg gtcactgctt
     1441 cggcgtgatc ccggtcgatc gggtgccgtg ctggaggtgg gggacgtggt cgttgacacg
     1501 gcccgccatc acgctcgtcg tggtggccgg gacttggcgc tcacggccaa ggagttcgct
     1561 gtgttgcggt atttcatgac ccggccgggt gaggtcatct cccaggagca gttgctggac
     1621 cacgtgtggg acgaacacgc cgatccgttc accaacacgg tgcgggtcac cgtcggcact
     1681 ttgcgtcgca agttgacggt gggcgatgag gatccagcac tcgagacggt ggtcggatcc
     1741 ggttaccg
//
LOCUS       DASCMR010000180         3549 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000882628, whole genome shotgun sequence.
ACCESSION   DASCMR010000180 DASCMR010000000
VERSION     DASCMR010000180.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3549)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3549)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3549
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000882628"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(91..687)
                     /locus_tag="QGG16_04510"
     CDS             complement(91..687)
                     /locus_tag="QGG16_04510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24569.1"
                     /translation="MDDQESADEVEASTSDDRARGADSPLPHTPPFGIRAVHPGDAPP
                     VGPPDLGGDPPRRERPAGNGLAAMAATVGVVLAIMGTFLPWIVVDRADGAVDHLIGWD
                     LAGDAVLVLVTGLVAAGVTGALWIGQRGLVHKLVLLLAGGVLLAVAGLEISDVRAVDA
                     VSSLERSVGSGLPVVALGGVLLVGGALLDRGPWSFGSR"
     gene            complement(748..822)
                     /locus_tag="QGG16_04515"
     tRNA            complement(748..822)
                     /locus_tag="QGG16_04515"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(786..788),aa:Cys,seq:gca)
     gene            complement(876..1349)
                     /locus_tag="QGG16_04520"
     CDS             complement(876..1349)
                     /locus_tag="QGG16_04520"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HJP24570.1"
                     /translation="MTTQDLPASGLQVRNQGFIDFMVGRKSDTCIDGFLGIRHEEISA
                     GRLVAEFDVDDQHLSFIGNMHGGCLAALCDHCLGVVLYPVMPPGSWAATTEFKVNYLK
                     PVSEGTCRATATIEAMTKRSAVVSIRVENLADDGMRLVALAQGTCTVKLAEDRPD"
     gene            1416..2483
                     /locus_tag="QGG16_04525"
     CDS             1416..2483
                     /locus_tag="QGG16_04525"
                     /inference="COORDINATES: protein motif:HMM:NF012517.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HJP24571.1"
                     /translation="MTGPRMRTAIQLAAEQAPWPEHVAWVVEAERLGIDHCWVAEAWG
                     GDAATPIAGLSQHVERMTFGSGVFQVGARSAANTAMTALTLQHITGGRFSLGLGASGP
                     QVVEGLHGVPFARPLTRMRETIEVVRMAEAGDRLAINGEQICLPLPGGEGKALRLALR
                     PPAGSDYPPLPIYIASLSPRMLALTGEVADGWLGTSFVPEGAASSFESLTAGAQRAGR
                     SLTDLDLCQGAEVAFARDEADLTAMVDMRRAGLAFSLGGMGSADTNFYNDAYARQGFA
                     EVAAESQRLWLAGDRAAASSVIPDEMVLATTLLGTEEMVAERLRVWHDVGITHVRLYP
                     AGDNIEERLETLGRALDLIPT"
     gene            2534..2965
                     /locus_tag="QGG16_04530"
     CDS             2534..2965
                     /locus_tag="QGG16_04530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family deazaflavin-dependent
                     oxidoreductase"
                     /protein_id="HJP24572.1"
                     /translation="MSDTDYAPSPWEPVADHVERYLATDGVDGFEFNGAECIILTTIG
                     RKSGMVRRSPLIRVHDGEFYLVVASMGGAPRNPIWYLNLAANPEVTIQDRAEVHELMA
                     RTASPEEKAERWPAALAAWPAYAEYQTKTDRDIPLVVCEPR"
     gene            complement(2984..3487)
                     /locus_tag="QGG16_04535"
     CDS             complement(2984..3487)
                     /locus_tag="QGG16_04535"
                     /inference="COORDINATES: protein motif:HMM:NF024773.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0120225 - coenzyme A binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HJP24573.1"
                     /translation="MSGWPAIDGWTPPSAVERRDLLARIRTIAMVGVSANPSRPSNFV
                     ATYLLGTDYEVYFVNPMADEILGRPCVPTLADLPVVPDCVDVFRRLDDVPEVADEAVA
                     AGAPVFWTQFGLWSPEAARTVLDAGMDLVMDRCLKIEHARFHGGLHLAGFDTGVINSK
                     RESGRKR"
BASE COUNT          580 a         1242 c         1167 g          560 t
ORIGIN      
        1 catgcaggtg ctctagccaa ctgagctaac ggccccggaa cgacacaggc tagcggtcgc
       61 cctttagtgg cacacccagc gagagatggg tcagcgggag ccaaacgacc agggaccacg
      121 gtccaacaac gcgccaccaa ccagcagtac cccaccgagc gccaccactg gtaggccgct
      181 gcctaccgac cgttcgagcg acgagacggc gtcgacggcc cgcacgtcgg agatctccag
      241 accggccact gccagcagca cgcccccggc tagcagcagc accagcttgt gcaccagccc
      301 ccgctgtccg atccacagtg ccccggtcac tccggcggca accaggccgg taaccagcac
      361 gagcacggca tcgccggcga gatcccaccc gatcaggtgg tcgacggctc cgtcggcccg
      421 atccacaacg atccacggca ggaacgtccc catgatggcc agcaccacgc cgaccgtcgc
      481 cgccatcgcc gccaggccgt tgcccgcggg tcgttcccga cgcggtgggt cgcccccgag
      541 gtcgggtgga ccgaccggcg gcgcgtcgcc gggatgtacg gccctgatgc cgaacggcgg
      601 cgtatggggc agcggcgaat cagccccgcg ggcacggtca tcgctggtgc tggcctcgac
      661 ctcgtcggcc gattcctgat catccatggg ttcccccgtt tctcatcggt cgccccgacc
      721 cgctgttgcg gatcgcccga tcagtcgagc accgggcggg atttgaaccc gcggctttac
      781 ggctttgcag gccgtcccct tgggcctctc gggcaccggt gcatctctcc ggtcggaacc
      841 ggagcagagc caatggtagc gctgcgtccc cggcctcaat cgggccggtc ctcggccaac
      901 ttcaccgtgc aggtgccctg ggccagagcc accagacgca tcccgtcgtc ggccaggttc
      961 tcgacccgga tcgagaccac cgcggatcgc ttcgtcatgg cctcgatggt ggccgtggcc
     1021 cggcacgtcc cctccgacac cggcttgagg tagttgacct tgaactcggt ggtggccgcc
     1081 catgaccccg gcggcatcac cgggtagagg accacgccca ggcagtggtc acagagggcg
     1141 gccaggcaac ccccgtgcat gtttccgatg aatgacaggt gctggtcgtc cacgtcgaac
     1201 tcggcgacca ggcggccggc cgatatctcc tcgtggcgga tccccagaaa tccgtcgatg
     1261 caggtgtcgg acttccgccc gaccatgaaa tcgatgaagc cctggttccg gacctgtagc
     1321 ccggacgcag gaagatcttg tgtggtcatc gtcggctctc ctcaccccgt cggggatggt
     1381 cgtcgcccac gctatgcacc agcaaggatg gggccatgac cggcccgagg atgcgaaccg
     1441 ccatccaact ggctgccgag caggcgccgt ggcccgagca tgtcgcatgg gtcgtcgaag
     1501 ccgaacgcct gggcatcgac cactgctggg tggccgaagc gtggggtggg gatgccgcca
     1561 cgccgatcgc cggcctttcc caacacgtcg agcggatgac cttcggttcg ggcgtcttcc
     1621 aggtgggtgc ccggtcagcg gccaacaccg ccatgacggc cctcactctt cagcacatca
     1681 cgggtggtcg gttcagcctt ggcctcgggg cgtcgggacc ccaggtggtc gaagggctac
     1741 acggcgtgcc gttcgctcgc ccgctcaccc ggatgcgtga gaccatcgag gtggttcgga
     1801 tggccgaggc cggtgatcgt ctggccatca acggtgaaca gatctgcctt cccctgcccg
     1861 gcggggaggg caaggctctc cgtttggccc tacgaccgcc ggccggatcg gactatccac
     1921 cccttccgat ctacatcgcc tcgttgtcgc cgaggatgct ggccctcacc ggcgaggtgg
     1981 ccgacggttg gttggggacg agctttgtcc cggaaggggc agcatcgtct ttcgagtccc
     2041 tgacggcggg ggctcaacgg gccgggaggt cgctaaccga cctggacctc tgccagggcg
     2101 ccgaggtggc cttcgcccgc gacgaggcgg acctgaccgc catggtcgac atgcgacggg
     2161 ccgggctggc gttcagcctc ggcggcatgg ggtcggccga caccaacttc tacaacgacg
     2221 cgtacgcccg ccagggcttc gccgaggtgg ccgccgaatc ccagcgcctc tggctggctg
     2281 gcgaccgggc ggccgcctcc tcggtcatcc ccgacgagat ggtgctggcc accaccctgc
     2341 tgggcactga ggagatggtg gccgaacgcc tccgggtgtg gcacgacgtc ggcatcaccc
     2401 acgtccgcct ctacccggcc ggcgacaaca ttgaggaacg cctcgagacg cttggacggg
     2461 cgctggacct cattcccacc tgagtggagt cccgctggga ggtcgcgcga tgcccggcca
     2521 tagggtcgat gccatgagcg acaccgatta cgcaccgagc ccctgggagc ccgttgccga
     2581 ccacgtcgag cgctatctgg ctaccgacgg cgtcgatggc ttcgagttca atggtgccga
     2641 atgcatcatc ctgaccacga tcggtcgaaa gtccggcatg gtccggcggt cgccgctgat
     2701 ccgtgtccac gacggcgagt tctatctcgt ggttgcctcg atgggcggtg cgcccaggaa
     2761 cccgatctgg tacctgaatc tggcggccaa cccggaggtc accatccagg accgggctga
     2821 ggtccacgag ctgatggccc gcactgcttc gcccgaggag aaagctgaac gctggccggc
     2881 cgcattggcc gcatggcccg cctatgccga gtaccagacg aagaccgacc gcgacatccc
     2941 cttggtggtc tgcgaacccc gctgaccagg acttctctgt cggtcagcgt ttgcgaccgg
     3001 actcccgctt cgagttgatg acgccggtgt cgaagccggc caggtgtagg ccgccgtgga
     3061 agcgggcgtg ctcgatcttc aggcaacggt ccatcaccag gtccatgcct gcgtcgagca
     3121 cggtccgggc cgcctcgggg ctccacagac cgaactgggt ccagaacacc ggggcacccg
     3181 cggccactgc ctcgtcggcg acctcgggca cgtcgtccag ccgacggaac acgtccacgc
     3241 agtcgggcac caccggtaga tcggcaagcg tcggcacgca gggccgaccg agaatctcgt
     3301 cggccatcgg gttcacgaag tagacctcgt agtcggtacc cagcaagtag gtagctacaa
     3361 agttgctggg gcgggagggg ttggccgaca ccccgaccat ggcgatggtc cgtatcctgg
     3421 ccagcagatc gcggcgctcg acggccgatg gtggggtcca gccgtcgatg gccggccacc
     3481 cgctcactgg gcaccgccgg tgagagcctg gtcaaggtcc cacaggatgt cgtcgacgtc
     3541 ttcgaggcc
//
LOCUS       DASCMR010000181         2433 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000885488, whole genome shotgun sequence.
ACCESSION   DASCMR010000181 DASCMR010000000
VERSION     DASCMR010000181.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2433)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2433)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2433
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000885488"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..693
                     /locus_tag="QGG16_04540"
     CDS             <1..693
                     /locus_tag="QGG16_04540"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJP24574.1"
                     /translation="APIKNALLDHHPCTIVDTLGSSEGTGMASQVTSGRTRAAGQRET
                     TARFSLGEHTRVFTEDGREVEQGSGERGQIALGWPLPVGYFKDPEKTESAFPMVDGRR
                     WSIPGDWATVEADGSITLLGRGSACINTGGEKVFPEEVEEALKELDAVTDCNVVGVED
                     ERWGQAVTAVVELTTPGAADEDSLKTELRTGLAGFKVPKRIVFVHRLERSPNGKSDYR
                     WAKEFAVAALAD"
     gene            complement(754..1620)
                     /locus_tag="QGG16_04545"
     CDS             complement(754..1620)
                     /locus_tag="QGG16_04545"
                     /inference="COORDINATES: protein motif:HMM:NF004843.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HJP24575.1"
                     /translation="MEDLQGKVAVITGGASGMGLAFAHRFAAAGMKVVLGDIEVPALD
                     AAVTGLRDAGAEVLGVRCDVSDAASVHGLATATEEAFGAAHVICLNAGVAGSGGLHEQ
                     TLADWEWILGVNLMGVVHGLDAFLSGLIERDEGHVVVTASVAGHTAYPGLGIYSATKH
                     AAAVIAETLYNELASSGSKVGATALCPGFVDTGIFNSARNRPEHLIDTLPDLEADEDR
                     ATREAFLEMIASQALKPDAVADLVHDAILDGTFWVFTDGRHVENITNRHAEIAGRRNP
                     TEGRAITEDALD"
     gene            complement(1698..>2433)
                     /locus_tag="QGG16_04550"
     CDS             complement(1698..>2433)
                     /locus_tag="QGG16_04550"
                     /inference="COORDINATES: protein motif:HMM:NF014860.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJP24576.1"
                     /translation="EVYGNRMGLLLKTTVAHVRHEAERTNTGGESGTFHLELSDGTKL
                     EADQLLVATGRTPNGDLADVAVGGIAVDERGYVTTDEQLRTSADCVWALGDVTNPVQL
                     KHTANAEARLVAHNLVHPDDPWSIDRRFVPHAVFGHPQVGSIGPTEQDLVDSGRPYLV
                     ATRDYASTAYGWAMEDTTGFAKVMADPKTRLLLGAHIVGPQAPTLVQQLIQGMVAGQT
                     VDQMAHDQLWIHPAMPELVEQALLAL"
BASE COUNT          414 a          750 c          829 g          440 t
ORIGIN      
        1 gccccaatca agaacgcact cctggaccac cacccgtgca ccattgtcga caccctcggc
       61 tcgagtgagg gcaccggcat ggccagccag gtcacctcgg ggaggacccg ggccgccggt
      121 caacgcgaga ccacggcacg cttctccttg ggagagcaca cccgggtgtt tacagaggac
      181 ggacgggaag ttgagcaggg ctcaggggag cgaggccaga ttgcgctggg ctggccactg
      241 cccgtcgggt acttcaagga tccggagaag accgagtcgg cattcccgat ggtggatggc
      301 cgtcgctggt cgatccccgg ggactgggcc accgtggagg ccgacggttc catcaccctg
      361 ctgggtagag gatcggcatg catcaatacc ggcggcgaga aggtcttccc cgaggaggtt
      421 gaagaggccc tcaaggagct ggatgcggtg accgactgca acgtggtggg tgtggaagat
      481 gagcgctggg gacaggccgt gaccgcggtg gtcgaactga cgacccccgg agcggccgac
      541 gaggattcgc taaagaccga gttacggacg ggtctggctg gctttaaggt gcccaagcgg
      601 atcgtgttcg tacaccgtct ggaacgcagc cccaacggga agtccgacta ccgctgggcc
      661 aaggagtttg ctgtcgcggc tctcgctgat tgatccgtac ctggtggccc ggctcagggc
      721 ccgcactctg agcttcatct ccgatccagc tcctcagtca agggcgtcct cggtgatggc
      781 gcgaccctcg gtggggttcc gacgcccggc gatctcggcg tgacggttgg tgatgttctc
      841 cacgtgccgg ccgtcggtga acacccagaa tgtcccgtcc agaatggcgt cgtgcaccag
      901 gtcagctacc gcgtccggct tgagggcctg agaggcaatc atttcgagga aggcttctcg
      961 agtggcgcga tcctcgtcgg cctcgaggtc gggcagcgtg tcgatgaggt gctctggccg
     1021 gttccgagcg gagttgaaga taccggtatc cacgaaaccc ggacacagcg ccgtagcacc
     1081 gaccttcgat ccgctggaag ccagctcgtt gtagagcgtc tcagcgatga ctgcggctgc
     1141 gtgcttggtg gccgagtaga tgcccagccc gggatatgcc gtgtgcccgg caaccgaggc
     1201 ggtgaccaca acatggccct cgtcgcgctc gatgagtccg gagaggaagg cgtccagtcc
     1261 gtggacgacc cccatcaggt ttacgccgag gatccattcc cagtcagcca gggtctgctc
     1321 gtgcagacct cctgagccag caaccccggc gttcaggcag attacgtgag cggccccgaa
     1381 tgcctcctcg gtggctgtag ccagcccgtg gaccgaggcg gcgtcggaca cgtcgcagcg
     1441 aacacccagg acctcggcgc ccgcatctcg gagtccggtc accgcggcgt ccagtgcagg
     1501 aacctcgatg tcgccgagga ccaccttcat gccggccgct gcgaagcggt gggcgaaggc
     1561 cagacccatg cctgatgcgc cgccggtgat gacggcgacc tttccctgca ggtcctccat
     1621 gattgatcgt tcctctcagg tgggttcagt tcgttggtcg ttggccagcg ggagtatccg
     1681 cctgggtcca gcttgcatca gagcgcgagg agggcctgtt cgacgagttc gggcatggcg
     1741 ggatggatcc agagttgatc gtgggccatc tggtcgacgg tctgacctgc caccatgccc
     1801 tggatgagtt gctggaccag ggtcggtgcc tgcgggccga cgatgtgtgc gcccagcagg
     1861 agccgggttt tcgggtcggc catgaccttg gcgaagccgg tcgtgtcctc catggcccac
     1921 ccgtaggcgg ttgacgcgta atcccgtgtg gccaccaggt aagggcggcc agaatcgacc
     1981 agatcctgtt cggtgggacc gatggaaccc acctgggggt ggccgaacac cgcatggggt
     2041 acgaaacgac ggtcaatgga ccacgggtcg tcaggatgga cgaggttgtg ggctaccagt
     2101 cgggcctcgg cgttggccgt gtgcttgagt tgcaccggat tggtgacgtc ccccagggcc
     2161 cagacgcaat cggccgacgt tcggagctgt tcgtcggtcg tcacgtatcc ccgttcgtcg
     2221 acagcgatgc caccgacggc cacatcggcc aggtcaccgt taggggtccg accggtggcc
     2281 accagcagct ggtcggcctc tagcttcgtt ccgtcggaca actcaaggtg gaaggtgccc
     2341 gactctcctc cagtattcgt tctctcggcc tcgtgtctga catgggccac ggtcgtcttg
     2401 aggagtaagc ccatccggtt gccgtagacc tcg
//
LOCUS       DASCMR010000182         3623 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000887701, whole genome shotgun sequence.
ACCESSION   DASCMR010000182 DASCMR010000000
VERSION     DASCMR010000182.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3623)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3623)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3623
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000887701"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..877)
                     /locus_tag="QGG16_04555"
     CDS             complement(<1..877)
                     /locus_tag="QGG16_04555"
                     /inference="COORDINATES: protein motif:HMM:NF020905.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urea carboxylase-associated family protein"
                     /protein_id="HJP24577.1"
                     /translation="MAGLAPGVERYRVTGGAVTAVLLGAGDRLQIIDPEGCQPVEVAA
                     FDRDGNSDPGLLGDLPHGASGAPATGITAILAAKGIDLATATAVQLFAPDSPSGLEAW
                     LTATADVVCVIGVTGGKMLPHEQNPPTDIIAFVHRTAPPVPGLEVLPTPLADQNQDLR
                     IDAATARVYEVKAGEFIQVIDVEGRECSDFQCFDAARLDGGVEAALDATITRSLMGAS
                     YPMPGLFAKYYSLDFQPMVEVVHDTVGRHDTFNTACNPKYYEDMGYPGHVNCSENFNR
                     VLAPYDIAPRRGWEAI"
     gene            1200..2609
                     /locus_tag="QGG16_04560"
     CDS             1200..2609
                     /locus_tag="QGG16_04560"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012348.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase family protein"
                     /protein_id="HJP24578.1"
                     /translation="MTDIQAFIEAEGRAEQVAEVQKRIEAEGIQYLYCQFVSVTGRIM
                     GKGIPAKHFGTIANKGFQLVYGSTANLFVDRHGQYIGYGPESRELVGVAEVDTFMKLP
                     WDPKTARVFCTLFRGREEEVDGGMFLTSDCRGNLQRIHKEFEEKTGLHLRAGTEPEMM
                     WLKADADGKPTVEGLTKPNCYHIDQFAELQPLIHRVVEYSEAMGLDMIQGDHEDAPGQ
                     LELNFNFDRAELTADRLTTYRQICKQVGRELGAFPCFMPKPFVGVSANGCHHNISLWT
                     GEPDEGGENKFMPEGDDPQIPGAIGMKAIGGIMEHLNALTCLGSPTVNSYRRLWDTGF
                     WAPVFADWGFQNRTTALRISAPGRFEYRSVDSAVNPYLSFAALIKAMDDGLDRNLDPG
                     PPEERNIYEAMEEGKEVKKIPMNLGEALDALRADEVVKSALPGEMFKVFEHYKRDEWE
                     RFMHTVTDWDVEEYLDILP"
     gene            2696..>3623
                     /locus_tag="QGG16_04565"
     CDS             2696..>3623
                     /locus_tag="QGG16_04565"
                     /inference="COORDINATES: protein motif:HMM:NF024628.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HJP24579.1"
                     /translation="MCGIAGIIHRDGSADIGAELTAMLQSMKHRGPDSTGYAMYGPPD
                     DLVVVRFMLAEPNEVGGFGMDEKMERNRAEVEARLAKVGADLATIHTESGGYAFRATI
                     RYGGDLKPLADYLEDIDGCEVLSLGNSLEIVKDLGDAESVHEQYQLDNLKGTHGIGHV
                     RMATESDVDLASAHPYWAYPFADVSVVHNGQLTNYHVWRRRLERMGHRFQSECDSEII
                     AVYLAQQLENGMPLETAMKHSLDDFDGVFTYLVATGNELGVAKDEMAAKPLVLMETDD
                     LVVMASEEMAIRALMGREVESRDPFEREVLTWQ"
BASE COUNT          678 a         1137 c         1185 g          623 t
ORIGIN      
        1 tgatggcctc ccagcctcgg cggggagcga tgtcgtaggg ggccagaacc cggttgaagt
       61 tttcactgca gttgacgtgg cccgggtagc ccatgtcctc gtagtacttg gggttacagg
      121 ccgtgttgaa ggtgtcgtgg cgccccaccg tgtcgtggac gacctccacc atcggttgga
      181 agtccagcga gtagtacttg gcgaacaggc cgggcatggg gtagctggcg cccatgaggc
      241 tgcgggtgat agtggcgtcc agcgcggctt ccacgccacc gtccagacgg gcggcgtcga
      301 agcactggaa gtcggaacac tcccggccct cgacgtcgat gacctggatg aactcgccgg
      361 ccttcacctc gtagacccgg gcggtggccg cgtcgattcg gagatcctga ttctggtcgg
      421 ctagtggcgt ggggaggacc tcgaggcccg gtaccggggg ggcggtgcgg tgaacgaagg
      481 cgatgatgtc ggtgggcggg ttctgctcgt gggggagcat cttcccgccg gtcacgccga
      541 tgacgcagac cacgtcggcc gtggcggtca accaggcttc caggccggaa ggggaatcgg
      601 gggcgaacag ttgaacggca gtagccgtag cgaggtcgat gcccttggcg gccaggatcg
      661 ctgtgatgcc cgttgccggg gcacccgatg caccatgggg cagatcgccc agcaagcctg
      721 ggtcggagtt gccgtcccgg tcgaacgcgg ccacctcgac gggctggcaa ccctcgggat
      781 cgatgatctg caaccggtcg cctgcgccta ggagcaccgc ggttaccgcg ccgccggtaa
      841 cccggtagcg ctccacgccg ggcgctaggc cggccatccc cggcatgaga agccgaggtc
      901 tttcggccat tgtgatcgtc atttcgtgct ctccgttgta cctagggcgc aggttccgtt
      961 ggatccgatc ccgatcatga caccgaacaa agtgtctgga cggcggcttc cgccccaccc
     1021 cccgtgagcg tagatgtcct ccactcacac gaaagatttc actggcaggg actgtagttg
     1081 attggtatgg tacgccggtc cgggaagcgt gaccccgggc tcgggccctc ttcccgaggg
     1141 ggtcgacgtt ctagcgaaac cgtcactagc gatgcgccct cgggcgccag ggggagacca
     1201 tgaccgacat ccaggccttc atcgaggcag aggggcgtgc cgagcaggtc gctgaggtcc
     1261 aaaagcgcat cgaggcagag ggcattcagt acctttactg ccagttcgtg tccgtgaccg
     1321 ggcgcatcat gggcaagggc atcccggcta agcacttcgg taccatcgcc aacaagggct
     1381 tccagttggt ctacgggtcc acggccaacc tgttcgtcga ccgtcatggc caatacatcg
     1441 gttacggccc ggagtcccgc gagttggtcg gcgtagccga agtagacacc tttatgaagc
     1501 tcccctggga ccccaagacg gctcgggttt tctgcacgtt gttccggggt cgtgaggaag
     1561 aggtcgacgg tgggatgttc ctcacctcgg actgtcgcgg caacctccag cgcatccaca
     1621 aggagttcga ggagaagacc ggcctccacc tgcgtgccgg gaccgagccc gagatgatgt
     1681 ggctcaaggc tgatgccgac ggaaagccca ccgttgaggg cctgaccaag ccgaactgct
     1741 accacatcga ccagttcgcc gagctccagc cgctcatcca cagggtggtc gagtacagcg
     1801 aggccatggg cctcgacatg atccagggtg accacgagga cgctccgggc cagctcgaac
     1861 tcaacttcaa cttcgacagg gccgagctga ccgccgaccg gctcaccacc taccgccaaa
     1921 tctgcaagca ggtcggtaga gaactcggtg ccttcccctg cttcatgccc aagcccttcg
     1981 tgggcgtgtc ggccaacggc tgccaccaca acatctccct gtggaccggc gagcccgacg
     2041 agggtggcga gaacaagttc atgcccgagg gtgacgaccc gcagatcccc ggagcgatcg
     2101 ggatgaaggc cattggcggg atcatggagc acctcaatgc gctgacctgc ttgggttcac
     2161 caaccgtcaa ctcctaccga cgactctggg acaccggttt ctgggcaccc gtcttcgccg
     2221 actggggctt ccagaaccgc accacggccc tgcgtatcag cgcaccgggc cgcttcgagt
     2281 accgctcggt cgactcggcg gtcaacccct acctgtcctt cgctgccctc atcaaggcca
     2341 tggatgacgg gctggatcgc aacctggatc ctggcccgcc cgaggagcgc aacatctacg
     2401 aggccatgga agaaggcaag gaagtcaaga agatcccgat gaaccttggc gaggccttgg
     2461 atgctctgag ggccgacgag gtcgtcaaga gcgctctccc cggagagatg ttcaaggtgt
     2521 tcgagcacta caagcgcgac gagtgggagc gcttcatgca caccgtgact gactgggacg
     2581 tcgaggaata cctcgacatt ctgccgtagg gccaattccc gggagtctgt ttcgggccct
     2641 gacctaagtc atacggaaca gaccacagag cgatacgaga gatcaggaga cccctatgtg
     2701 tggcatcgcc ggcatcatcc atcgcgacgg ctcggccgac atcggcgccg agttgaccgc
     2761 gatgctccag tccatgaagc accggggtcc cgactccacc ggttacgcca tgtacggccc
     2821 gcccgacgac ctggtcgtcg tacggttcat gctggctgag cccaacgagg tcggtggctt
     2881 cggcatggac gagaagatgg agcgcaatcg ggccgaggtc gaggcccgcc tggccaaggt
     2941 cggtgcagac ctggccacca tccacaccga gtccggcggc tacgccttcc gggccaccat
     3001 ccggtacggc ggtgacctga agccgctggc cgactatctg gaggacatcg acggttgcga
     3061 ggtgctctcg ctgggcaact cgttggagat cgtcaaggac ctcggtgacg cggagtcggt
     3121 ccacgagcag taccagctgg acaacctgaa gggcacccat ggcatcgggc acgtacgcat
     3181 ggcgaccgag tcagacgtgg acctggccag cgctcacccc tactgggcct acccgttcgc
     3241 cgacgtatcg gtcgtgcaca acggacagct caccaactac cacgtatggc gccgtcgtct
     3301 cgagcgcatg ggccaccggt tccagtccga gtgcgactcg gagatcattg ccgtttacct
     3361 ggcccagcaa ctggaaaacg gcatgccgct ggaaacggcc atgaagcaca gccttgatga
     3421 cttcgacggc gtgttcacct acctcgtggc aaccggcaac gagttgggtg tggccaagga
     3481 cgagatggcg gccaagccgc tggtgctcat ggagaccgac gacctggtcg tcatggcctc
     3541 cgaggagatg gcgatccggg cgctgatggg tcgtgaggtc gagagccgcg atccgttcga
     3601 gcgggaggtc ctgacgtggc agg
//
LOCUS       DASCMR010000183         3250 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000890267, whole genome shotgun sequence.
ACCESSION   DASCMR010000183 DASCMR010000000
VERSION     DASCMR010000183.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3250)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3250)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3250
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000890267"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..359
                     /locus_tag="QGG16_04570"
     CDS             <1..359
                     /locus_tag="QGG16_04570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24580.1"
                     /translation="TSEPTTPVVLDITWDPTEVNLGAAAGGCADTSQTETSETLQVTI
                     EPDDWPLGDWGASMPAGMLTFATSGAGDGIADGDQITEIRVTVVDELSDPAYHNADDL
                     VITVTTVDRPDGAICH"
     gene            413..754
                     /locus_tag="QGG16_04575"
     CDS             413..754
                     /locus_tag="QGG16_04575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24581.1"
                     /translation="MPFSGILAAAAITASLLAGCGSDSGLRSPDYGALEEIKTGIERE
                     AWIRTDLLIGLPWREARQMADDAGWHTEMYFPAEDQESMAWTLDSQWDRLRIVVTGGE
                     EAGTVSNVSEG"
     gene            762..1112
                     /locus_tag="QGG16_04580"
     CDS             762..1112
                     /locus_tag="QGG16_04580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24582.1"
                     /translation="MRTIKLLAAVTLAIGLLVGCGSDSGLRSQPRWYNSWALDEPKSG
                     AEREAWIRTDLLIGLPWREAQKMAHDAGWDTQVIFTVEGEPTPMTADLRLDRLRLIVV
                     GGEEAGTVTDVINS"
     gene            complement(1348..2385)
                     /locus_tag="QGG16_04585"
     CDS             complement(1348..2385)
                     /locus_tag="QGG16_04585"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HJP24583.1"
                     /translation="MKIDGGLTGLTTPADKSGIGAIGEAARRLEEAGYSGAWTAETSH
                     DPFLPHMVAAEHTERIELGTSIAVAFARNPMLLANLGHDLQRYSDGRFIMGLGTQIKP
                     HITKRFSMEWSRPAARMREMISAMRAIWSTWNDGEKLAFRGDFYSHTLMTPFFDPGPN
                     ECGPPKVFIAAVGPLMSEVAGEVCDGLICHAFSTEHYLREVTIPAIERGLEKSGRTMN
                     DFEIVGPGFVVTGSTEEAMAKAATGVRQQIAFYGSTPAYRPVLETHGWGDLQDDLNRM
                     SKLGQWQEMGELIDDEVLDAFAVVGEQGAVATGFRDRYGDCVDRLSFYTQGGEGGAAF
                     WEPIIADLSTT"
     gene            2434..3054
                     /locus_tag="QGG16_04590"
     CDS             2434..3054
                     /locus_tag="QGG16_04590"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012521.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HJP24584.1"
                     /translation="MELLLIRHGLPVTVDNRDTGAEADPVLSELGCRQAEALADWFVN
                     PPTAQRIDAVYASPKARAQQTVAPLAARLGLELVIEPMVNEYDQGEPEYIPIEHLKAS
                     GDPRWEAMMAGDDLPDPEAFQAQVVEGMGRIIAANPGRTVAVGCHGGVVSAYLSHLLG
                     IGRVMFYEAHYTSVARVAASSAGHRSVRSMNELGHLQVAGVSLSDI"
BASE COUNT          586 a         1098 c         1056 g          510 t
ORIGIN      
        1 tgacgtccga gccgaccacc ccagtggtcc tcgacatcac ctgggacccg accgaagtca
       61 acctcggagc cgcagctggc ggttgcgccg acaccagcca gaccgaaacg tccgagaccc
      121 tccaggtcac catcgaaccc gacgactggc cactggggga ctggggggcc tcgatgccgg
      181 cgggcatgct cacgttcgcc acgtcaggcg ccggcgacgg aatcgccgac ggcgaccaga
      241 tcaccgagat ccgcgtgacc gtcgtagacg aactatccga cccggcgtac cacaacgcag
      301 acgacctcgt catcacggtg accactgtcg accgcccgga cggggcgatc tgtcactagg
      361 cacacaagaa atgcggacac gccccatgac agccaggacg gttttccata ccatgccttt
      421 cagcggaatc ctcgcagcag cagccatcac cgccagcctc ctagccggct gcggttcaga
      481 ctccggcctg cgcagccccg actacggggc cctcgaagag atcaagaccg gcatcgaacg
      541 cgaagcatgg atccgcaccg acctactgat cggcctgccg tggcgcgaag cccgacagat
      601 ggcagacgac gccggctggc acaccgagat gtacttcccc gcagaggacc aagagtccat
      661 ggcctggacc ctcgactcgc aatgggatcg gctacgcatc gtcgtgacag gtggcgaaga
      721 agccgggacg gtcagcaacg tctccgaagg ctgatcacac catgcgtacc atcaaactcc
      781 ttgcagcagt aaccctcgcc atcggtctcc tggtcgggtg tggttcggac tccggcctgc
      841 gcagccagcc caggtggtac aactcctggg ccctcgacga gcccaagtcc ggcgccgaac
      901 gggaagcgtg gatccgcacc gacctgctga tcggcctgcc gtggcgcgaa gcccagaaga
      961 tggcacatga cgccggctgg gacacccagg tgatcttcac cgtggagggc gaaccgaccc
     1021 ccatgacagc ggacctccgc ctggaccggc tgcgcctcat cgtggtcggc ggcgaagaag
     1081 ccggaacggt gacagacgtc atcaacagct gatccaccgg gcccggcaac aggcagatgg
     1141 acggtacgga atcagggcag gggagcggac cgtcatcacc atctggccag acgaacgaaa
     1201 acgccagaga gcgtcacctt cgggtggcgc tctttcgccg tttaccgcag ggacaggtcg
     1261 aacacgctgc cggtccgcag gacggccttg gcgccgccgg ttacggcgtc acgctggctc
     1321 ccacggcttc aaatctacta atgggcgtca ggtggtcgat aggtcggcga tgattggctc
     1381 ccagaacgct gcaccaccct caccgccctg ggtgtaaaag ctcagccggt ccacacagtc
     1441 gccgtagcgg tcccggaagc cggtggccac cgcgccctgt tcgccgacca ccgcgaaggc
     1501 gtccaacacc tcgtcgtcga tgagttcgcc catctcctgc cactggccca gcttggacat
     1561 gcggttcagg tcgtcctgga ggtcacccca accgtgggtc tccagaacgg gccggtaggc
     1621 cggcgtggag ccgtagaagg cgatctgctg acggaccccg gtggctgcct tcgccatggc
     1681 ctcctcggtg ctgccggtca ccacgaagcc cggtccgacg atctcaaagt cgttcatggt
     1741 gcggcccgac ttctcaaggc cccgctcgat ggccgggatg gtgacctccc ggagataatg
     1801 ctcagtgctg aaggcatggc agatgagtcc gtcgcatacc tcgcctgcca cctcggacat
     1861 gagcggaccg accgcggcga tgaacacctt gggaggtccg cactcgttgg ggccgggatc
     1921 gaagaacggg gtcatcaagg tgtgcgagta gaagtcgcca cggaaggcca gcttctcgcc
     1981 gtcgttccag gtggaccaga tggcccgcat ggcgctgatc atctcgcgca tgcgggctgc
     2041 cggcctggac cattccatcg agaagcgctt ggtgatgtgg ggcttgatct gagtacccag
     2101 acccatgatg aaccgaccgt cgctgtaacg ctgcaggtca tggcccagat tggccagcag
     2161 catcggatta cgggcgaacg ccacggcgat cgacgtgccc aactcgatgc gctcagtgtg
     2221 ttcagcggcc accatgtggg gcagaaacgg gtcgtggctg gtttcggccg tccaggcccc
     2281 ggagtagccg gcctcctcca ggcggcgggc cgcctcgccg atggcgccga tgccgctctt
     2341 gtcggcgggc gtggtgagtc cggtgagtcc tccgtcgatc ttcatggcgc cgaaggtagc
     2401 gggggccggt cgcgccgcta ctgtccgccg gtcatggagc tcctactgat ccgccacggc
     2461 ctcccggtca ccgtcgacaa ccgtgacacc ggggccgagg ccgacccggt gctgtctgag
     2521 ctgggctgcc ggcaggccga ggcgctggcc gactggttcg tgaacccgcc gaccgcgcag
     2581 cggatcgacg ccgtgtacgc cagtcccaag gcccgggcgc agcagactgt ggcacccttg
     2641 gccgcccgcc tgggcctcga actggtcatc gagccgatgg tcaacgagta cgaccagggt
     2701 gagccggagt acatccccat tgagcaccta aaggccagcg gtgacccccg ctgggaggcg
     2761 atgatggccg gcgacgacct gcccgacccc gaggcctttc aggcccaggt ggtcgaggga
     2821 atgggccgga tcatcgccgc caacccgggg cggaccgtgg ccgtgggttg tcacggcgga
     2881 gtggtgtcgg cctacctgtc tcacctgctg ggcatcgggc gagtgatgtt ctatgaggcc
     2941 cactacacgt cggtggcgcg ggtggccgcg tcatcagccg ggcaccggtc ggtgcgttcc
     3001 atgaacgaac tgggccatct acaggtggct ggagtgtccc tcagcgacat ttgaccggct
     3061 taatggtcag cctgcaggga gtcagttgtt gaccgacccc cccctcagag gccccgggtc
     3121 acggcaccag ttccggaagg tcccggaagt ggtcgagggt ctcgggattg gccagcgcct
     3181 cgacgttggt gatcggccgg ccctccacca cggcacgcac ggccagctcc acgagcttgc
     3241 ccgatcgggt
//
LOCUS       DASCMR010000184         4479 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000898173, whole genome shotgun sequence.
ACCESSION   DASCMR010000184 DASCMR010000000
VERSION     DASCMR010000184.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4479)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4479)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4479
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000898173"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..272
                     /locus_tag="QGG16_04595"
     CDS             <1..272
                     /locus_tag="QGG16_04595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24585.1"
                     /translation="PGVQESHGNVSMTAVRGGDVNGVHLAYEVAQVATRRADTVIVCE
                     SRDPGGITANDSDDLMADSSGRAKERGDNAPMSNNPPPHQASIAP"
     gene            450..1337
                     /locus_tag="QGG16_04600"
     CDS             450..1337
                     /locus_tag="QGG16_04600"
                     /EC_number="3.8.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018786 - haloalkane dehalogenase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="haloalkane dehalogenase"
                     /protein_id="HJP24586.1"
                     /translation="MTPTTGKHPIDKRFATVNGKRMAYVEVGEGDPIVFLHGNPTSSY
                     LWRNIIPYVADLGRCIAPDLIGQGDSEKLDDSGPGSYRFVEHRTYLWELLEQIGVTER
                     VTLVVHDWGSALGFDWAANHPEAVAGVCYMEAIVRPIATWDEWPESARGIFQAFRSAA
                     GEDMVLEKNLFVEAVLPGATICDLAPEDHDEYRRPFTEPGEGRRPTLTWPREIPIADE
                     PADVVSIASAYANFMASAPFPKLFVNAEPGAILTGAQRQFCRTWLNQTELTVAGKHFI
                     QEDSADEIGTALADWHTHL"
     gene            complement(1447..2304)
                     /locus_tag="QGG16_04605"
     CDS             complement(1447..2304)
                     /locus_tag="QGG16_04605"
                     /inference="COORDINATES: protein motif:HMM:NF017532.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HJP24587.1"
                     /translation="MSQALTRLSADGLLASALEVFDTDGGMVVEGMVGGGVIDELLRA
                     TTAFAKGVQPGAANQGMGEAGKFFVGANTVRFSSLGRITPAYFDLLDNEVYAALADAV
                     LLPNCGSYWVNTAQVMFIGPGEPAQVLHRDADNWFQHVEPTWPDTPEVTISAMIALEE
                     VTEELGATRAVPGSHRWPELEVYDFEAESVPAELAPGDAFVYSGKTLHGGGANLTVDR
                     WRRALHLSFVVGWLTPEEANALDYAPGELDDRSPRAQRLLGHRSYDPRPHIGGGLWLR
                     HVRPIEDQA"
     gene            2539..3342
                     /locus_tag="QGG16_04610"
     CDS             2539..3342
                     /locus_tag="QGG16_04610"
                     /inference="COORDINATES: protein motif:HMM:NF006108.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crotonase/enoyl-CoA hydratase family protein"
                     /protein_id="HJP24588.1"
                     /translation="MTVHTNSDGPVTVITIDRPEVRNAVDRDTAEALGSAFDAVDADE
                     DTSVIVLTGSSGTFCAGADLKALSDGRGNRVTEPDVAGIVDSLGPMGPTRRALSKPVI
                     AAIEGHAVAGGLELALWCDLRIAATDAVFGVYCRRWGVPLVDGGTVRLPRLIGHSRAM
                     DLILTGRAVGGDEALQMGLANRLCESGAALDTAVEVARELATFPQRCLRSDRLSAIEQ
                     WGLDLGPALANEVRRGMATIRSGETQEGATRFADGEGRHGSFAAFSPGT"
     gene            complement(3744..>4479)
                     /locus_tag="QGG16_04615"
     CDS             complement(3744..>4479)
                     /locus_tag="QGG16_04615"
                     /inference="COORDINATES: protein motif:HMM:NF024771.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HJP24589.1"
                     /translation="GRTDGSVRLHSSIPSGTPDELLAEIDLARAEGYTFHSAKIGADV
                     EVDVERMRILDAAMVPGEELTFDVNRSWTPAEAISVLSATREILRVVEQPCETYGQHL
                     AVRSAVGQPLAIDESLVTVDDMIRAVGDRACEVVGLKIGRVGGITPARRIRDVAAAAG
                     IRMNIEDTGGTALSASAAVHLAQATPEPLRRATWLCFDHLTDNPVEGGVANDGGTATA
                     PDSPGIGAVPDQAALGQSLAIFEADR"
BASE COUNT          836 a         1462 c         1420 g          761 t
ORIGIN      
        1 accccggcgt ccaggagagt cacggaaacg tctcgatgac tgctgtgcgg ggtggcgacg
       61 taaacggcgt ccacctcgcc tacgaggtcg cccaagtcgc aactcgacgc gccgataccg
      121 tgatcgtctg cgaaagccgc gaccctgggg gcatcacggc caacgacagc gacgacctca
      181 tggccgactc ctctggccgc gctaaggaac gtggagacaa tgcccccatg tccaacaatc
      241 ccccaccgca tcaggccagc atcgcacctt gacccagagt tgggcctccc ctgggccacg
      301 gccctcgaag tgagcaaagc atcaagatct tgaccgtctt ggtgccaagg tccgagccgc
      361 tggctgcggt gcgaagccgt tccctgcatc tgctggttga cgagccactt cctgaaggta
      421 tacggacggt aggactacgg tccgtcggta tgaccccgac cacaggaaag cacccgatcg
      481 acaagcgatt cgccaccgtc aatggcaaac ggatggccta cgtggaggtc ggtgagggcg
      541 acccgatcgt gttcttgcac ggcaacccca cgtcgtcgta cctctggcgc aacatcatcc
      601 cgtacgtggc cgacctcggg cgttgcatcg cccccgactt gatcggccag ggcgattcgg
      661 agaagttgga cgactccggc cccggctcgt accgattcgt ggaacaccga acctacctgt
      721 gggaactgtt ggaacagatc ggcgtgacgg agcgtgtgac cctggtcgtg cacgactggg
      781 gctcggctct cgggttcgac tgggccgcca accaccccga ggcggtagcc ggggtctgct
      841 acatggaggc catcgtccgg cccatagcca cgtgggacga gtggcccgag tccgcacggg
      901 gcatcttcca ggccttccgg tcggcggcgg gcgaggacat ggtgctggag aagaacctgt
      961 tcgttgaggc ggtcctcccc ggggcgacga tctgcgacct ggcacccgag gaccacgacg
     1021 agtaccgacg accgttcacc gaaccgggtg aagggcggcg ccccaccctc acctggcccc
     1081 gtgagatccc aatagctgat gagccggccg acgtggtgtc gatcgcctcg gcatacgcga
     1141 acttcatggc gtcggccccg ttcccgaagt tgttcgtgaa cgcagaaccc ggcgccatcc
     1201 tgaccggcgc ccagcgccag ttctgtcgta cctggctcaa ccagacagag ctcacagtcg
     1261 ccggaaaaca tttcatccag gaggactccg ctgatgagat aggaacagcg ctggccgact
     1321 ggcacacgca cctgtaagta gcagaacccg gttccaagcc ctcacgttcc tcgagcaccg
     1381 agcgacagac gtagatggct ggtgcgtgct gcgctctccg acatggaacc agaaagggct
     1441 agccggtcaa gcctggtcct cgatgggtcg aacgtgccgg agccacagcc caccgccgat
     1501 gtgggggcgc gggtcgtagg agcgatgtcc aagcagtctt tgcgcccgtg gtgaccggtc
     1561 atcgagctcg ccgggggcgt agtcgagcgc gttggcctcc tcgggagtga gccagccaac
     1621 cacgaagctg aggtgtagtg cacgtcgcca ccggtcgaca gtgaggttgg cccctccccc
     1681 atggagggtc ttcccggagt agacgaacgc atcgccgggg gcgagttcgg ctggaacgga
     1741 ctctgcctca aagtcgtaca cctccaactc gggccaccgg tggcttccag ggaccgcccg
     1801 ggtcgcgccg agctcttcgg tcacttcttc gagggcaatc atggcgctga tggtcacctc
     1861 cggcgtgtca ggccaggtgg gttccacgtg ttggaaccaa ttgtcggcgt cgcggtgtag
     1921 cacctgagcc ggctcgccgg gtccgatgaa catgacctgt gccgtgttaa cccagtacga
     1981 gccgcagttg ggcaggagaa cggcgtccgc aagggcggcg tagacctcgt tgtcgagcag
     2041 atcgaagtag gcgggagtga tcctgccgag gcttgagaag cgaacagtgt tcgcgccaac
     2101 gaaaaatttt cccgcttcgc ccatgccctg attagcggca cccggttgaa cgcccttcgc
     2161 gaacgccgtc gttgcacgga gcagttcatc tatcacgccc ccgccgacca tgccctcgac
     2221 gaccatgccg ccatcggtgt cgaagacctc aagggccgac gcgagcaagc cgtcagccga
     2281 aagtctggtc agtgcctgtg acatcgatcc ttctcctccc caagaaaagc gtacctacgc
     2341 gatacagagc gaccttcggg ccgattgaga tgatcaggaa tgcagcctta agacaccgtc
     2401 aaggcgcctg gggttcacgc aaggcgactt gacctatagc ccgccctatc ccttccgact
     2461 cccgtaccag tactgacgaa ttccagccgg gtaccaatat caggtcggct acaggtcgag
     2521 ccgtataccg tgccgatcat gaccgtccac accaactccg acggaccggt gactgtcatc
     2581 accatcgacc gccccgaggt tcgcaacgcc gtcgaccgag acaccgccga agccttgggc
     2641 tcggcattcg acgcagttga tgccgacgaa gacacctcgg tcatcgtgct caccggttca
     2701 agtggcacgt tctgcgccgg ggccgatctc aaggccctct cagacggtcg cggtaaccgg
     2761 gtgaccgagc ccgatgtagc cgggatcgtc gactcgctgg gcccgatggg gccgacgcgc
     2821 cgggcgctgt ccaagccggt gatcgccgcc attgagggcc atgccgtcgc cggcggcctg
     2881 gagttggcgc tgtggtgcga cctgcgaatc gctgccaccg acgctgtctt cggtgtctat
     2941 tgccgacgct ggggggtccc cctggtagac ggtggaacgg ttcgcctccc ccgtctaatc
     3001 ggacatagcc gcgccatgga cctgatcctt accggacgag cggtgggtgg cgacgaggca
     3061 ctccagatgg gtctggccaa ccggctgtgc gaatccggtg ctgcgctgga cacggccgtc
     3121 gaggtcgcca gggagttggc gacgtttccg caacgatgcc tgcgatccga ccgtctctcg
     3181 gctatcgagc agtgggggct ggatctagga cctgcgctcg ccaacgaggt ccgccggggc
     3241 atggcgacca ttcgtagcgg cgagacccag gagggtgcca cccgctttgc cgatggtgaa
     3301 gggcgtcacg gctcattcgc tgcgttctcc cccggtacct agacgaggcg acagaaggca
     3361 tttctccagt ggattccgat gacgagaaac cgttccctct aactacagaa tggtttgagc
     3421 tccaacgcca ggaagcggta gaaaacgcta gggcgagtaa ggctcagcgc gagcaggatc
     3481 gggccaataa gggcaagacg aggggtcggg agtatcgact cctgcgatgg tggaaatcca
     3541 ggctgccacc gccccaataa acggacgcga acagggttgt tactaggacc gccgtcaggc
     3601 gcaccgtcgc gacgttaggc ctaccagcca gccggatccg ccccaaaggg ccaaaccggg
     3661 cccaccggta accttcacag cgaggaagac cgttaccggc agtaacgcgc cacataacgc
     3721 gccaccctca ccgagggggc tatttaccgg tcggcctcaa agatggccag cgattggcca
     3781 agcgcggcct ggtcgggaac cgcaccgatg cctggggagt ccggggcggt agctgtaccc
     3841 ccgtcgttgg ccacgccccc ctccaccggg ttgtcagtca ggtggtcgaa gcacagccag
     3901 gtggcgcgcc gcaacggttc aggagtcgcc tgggccagat gcaccgcagc gcttgccgac
     3961 agggcggtgc cccccgtgtc ctcgatgttc atccggatcc ccgctgccgc cgccacgtcc
     4021 cggatgcgac gggccggggt gatccccccc actctgccga tcttcagacc gaccacctcg
     4081 caggcccggt cgccgaccgc cctgatcatg tcatcgacgg tgacgagcga ctcgtcaata
     4141 gccaggggct ggccgaccgc ggaccgcact gcaagatgtt gcccgtaggt ctcgcagggc
     4201 tgttccacca ctcggagaat ctcccgggtg gcgctcaata cgctgattgc ctcggcggga
     4261 gtccaggagc ggttgacgtc gaaggtgagt tcctcgcctg ggaccatggc tgcgtcgagg
     4321 atccgcatgc gttcaacgtc aacttctaca tcggcgccga tcttggccga gtgaaatgtg
     4381 tagccctcgg ccctagccaa gtcgatctcg gctaggagtt cgtcgggggt gccggatggt
     4441 atggacgagt ggagccgcac tgagccatct gttctcccg
//
LOCUS       DASCMR010000185         2492 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000900437, whole genome shotgun sequence.
ACCESSION   DASCMR010000185 DASCMR010000000
VERSION     DASCMR010000185.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2492)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2492)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2492
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000900437"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..258
                     /locus_tag="QGG16_04620"
     CDS             <1..258
                     /locus_tag="QGG16_04620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24590.1"
                     /translation="TENEAIVQLALADALAGRTAVVIAHRLSTVVDADEIVVLDEGTI
                     VERGRHSELRDAGGLYAELWEALVRGENGAEGGAGIGPDGP"
     gene            275..1477
                     /locus_tag="QGG16_04625"
     CDS             275..1477
                     /locus_tag="QGG16_04625"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012784196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HJP24591.1"
                     /translation="MASPQTRSSIVILAGARTPMGRFQGGLSSLTATDLGAGAIAAAI
                     DRSGITPEDVDFAYLGNVVAAGVGQVPARRAAADAGIPLTVPSTLLNRACLSGLHAIH
                     LASQMIRLGEADTVVAGGMESMTNAPYLLTKARSGYRIGDGAVVDSMMADGLTCTLEH
                     CAMGEATERYASELGLAREPQDAFAAASHERAARAQKDGLFATEIVPVSIPQRRGEPV
                     VVSDDEGIRTDADAESMGRLPAAFAPDGNLTAGNASQISDGAAACIVTTMDRAEALGI
                     APLAEVVSHGQVAGPDASLLHQPSNAISVALDRAGLTVADMDLLEINEAFAAVALASM
                     GALGVTDEIVNVNGGAIALGHPIGMSGTRIALTLAHELARRGGGLGAAGLCGGGGQGE
                     AMVLRVAA"
     gene            1474..>2492
                     /locus_tag="QGG16_04630"
     CDS             1474..>2492
                     /locus_tag="QGG16_04630"
                     /inference="COORDINATES: protein motif:HMM:NF012363.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase family protein"
                     /protein_id="HJP24592.1"
                     /translation="MISDAEGPTDEATNQPSSGPTAQVAEGTLKGRHRKGVELFAGIP
                     YAAPPTGDRRFRAPEPPEPWDGVRDARRFGPAAPQLPGTGLTSNFEVRWDEDCLTLNV
                     VTPGCTVPDGGAGRPVYVWIHGGAYKHGQGATPWYDGTSFATRGDIVVVTINYRLGAL
                     GFCDLASHLGDDFATCGINGTLDQLAALQWVQANIAAFGGDPERITIGGESAGAFSVC
                     NLLAMEAADGLFHRAIAQSGACHHTFGPVDGREIAGEFLNQLGNPSADVLMALPVDDL
                     LQAMERVSEESGQRTGRSQEPFYPVWGHDLLPRDPRDLMADGAGATVPLLTGTNEDEL
                     ALWGVT"
BASE COUNT          393 a          881 c          838 g          380 t
ORIGIN      
        1 accgagaacg aggccatagt ccagttggcc ctggccgacg cgctggccgg tcgaacggcc
       61 gttgtcatcg cccaccggct gtccacggtg gtcgacgccg acgagatcgt ggtcctcgac
      121 gaaggaacga tcgtcgaacg gggccgccac agtgagttac gcgacgccgg cggcctgtac
      181 gccgaactct gggaggcctt ggtacggggg gaaaatgggg ctgagggtgg ggccggaatc
      241 ggaccggacg gcccctgacc ggtaccgtcg gggagtggcc agcccccaaa cccgttcgtc
      301 catcgtcata ctcgccgggg cccgtacccc catgggtcga ttccagggcg gcctgtcgtc
      361 gctgacagcg actgatctgg gcgccggagc catcgcggcg gccatcgatc gctcgggaat
      421 cactcccgag gacgtcgact tcgcctacct gggcaacgtt gtggccgccg gtgtcggcca
      481 ggtgccagca cgtcgggccg ccgccgatgc ggggattccc ctcaccgtgc ccagcacgtt
      541 gctgaaccgg gcctgcctgt cggggctgca tgccatccac ctggcctccc agatgatccg
      601 cctcggcgaa gccgacaccg tggtggctgg cggcatggag tccatgacca atgcccccta
      661 cttgctcacc aaggcccgct ccggctaccg catcggtgac ggggcggtcg tcgattcgat
      721 gatggccgac ggcctgacct gcacgctcga acattgcgcc atgggtgagg ccaccgaacg
      781 ttacgcctcc gaactgggcc tggcccgcga gccccaggac gcctttgccg ccgcatctca
      841 cgagcgggcc gcccgagccc agaaggacgg cctgttcgcc accgagatcg tgccggtgag
      901 cattccccag agaaggggtg aaccggtagt ggtgtctgat gacgagggca tccggactga
      961 cgccgacgcc gagtcgatgg gccgcctgcc agccgccttt gctcccgacg ggaatctcac
     1021 cgctggcaac gcctcgcaga tctcggacgg cgccgccgcc tgcatcgtga ccaccatgga
     1081 ccgagccgag gccctaggca tcgccccgtt agccgaggtg gtatctcatg gtcaggtggc
     1141 cggtcccgac gccagcttgc tccaccagcc cagcaacgcc attagcgtgg ctctcgatcg
     1201 ggctggcctg accgttgccg acatggacct gttggagatc aatgaagcgt tcgccgcggt
     1261 ggctctggcg tcgatgggtg ccctcggggt gaccgacgag atcgtcaacg tgaacggtgg
     1321 tgccatcgcc ctgggtcacc ccattgggat gtctggcacc cgcattgccc tcacgttggc
     1381 ccacgagttg gcccgacggg gtggaggcct cggggccgcc ggcctgtgtg gcggcggcgg
     1441 tcagggcgag gccatggtcc tgcgggtcgc cgcatgatct ccgacgccga aggtccaacc
     1501 gacgaagcca ccaaccagcc ctccagtggg cccaccgccc aggtcgccga gggaaccctc
     1561 aaggggcggc accgcaaggg tgtcgagttg ttcgccggaa tcccctacgc ggccccgccg
     1621 accggtgacc ggcggttccg ggcccccgaa cctcccgaac cgtgggacgg cgtgcgcgac
     1681 gcacgacgct tcggcccggc cgcgccacag ttgcccggca ccggcctgac cagcaacttc
     1741 gaggtccgct gggacgagga ctgtctcacc ctgaacgtcg tcaccccggg ctgcacggtc
     1801 cctgacggag gagccggccg ccccgtctac gtgtggatcc acggcggcgc ctacaaacac
     1861 ggtcagggcg ctaccccgtg gtacgacggg acctccttcg ctacccgggg cgacatcgtg
     1921 gtcgtcacta tcaactaccg gctaggcgcc ctcggcttct gcgacctggc cagccacctc
     1981 ggcgacgact tcgccacgtg tggcattaac ggcaccctgg accaactggc cgccctgcag
     2041 tgggtgcagg cgaacatcgc ggcgttcggc ggcgaccccg agcgaatcac catcggcggc
     2101 gagtcggccg gtgcgttcag cgtgtgcaac ctgctggcca tggaggccgc cgacggcctg
     2161 ttccaccggg ccatcgcgca gagcggggcc tgccaccaca cgttcggccc cgttgacggc
     2221 agggagatag ccggagagtt cctgaatcag ttgggcaacc catcggccga cgtcctcatg
     2281 gccctacccg tcgatgacct gttgcaggcc atggagcggg tcagcgagga aagcggccaa
     2341 cgcacgggcc gtagccagga gcccttctat ccggtgtggg gccacgacct tctcccccgc
     2401 gacccccggg acctgatggc cgacggcgcc ggggcgacgg tgcccctgct gaccggcacc
     2461 aatgaagacg agttggccct ctggggcgta ac
//
LOCUS       DASCMR010000186         2444 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000900892, whole genome shotgun sequence.
ACCESSION   DASCMR010000186 DASCMR010000000
VERSION     DASCMR010000186.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2444)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2444)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2444
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000900892"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..250)
                     /locus_tag="QGG16_04635"
     CDS             complement(<1..250)
                     /locus_tag="QGG16_04635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24593.1"
                     /translation="MSDAFRRCFAGWWAPVLSGLMLLAAACGGGDDSTLTGSRGGGPA
                     DEAGNGRTATTSIVEVRPTQPDAGIPDWVGEVVNLHDLE"
     gene            286..969
                     /gene="ccmA"
                     /locus_tag="QGG16_04640"
     CDS             286..969
                     /gene="ccmA"
                     /locus_tag="QGG16_04640"
                     /EC_number="7.6.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015439 - ABC-type heme transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC exporter ATP-binding protein CcmA"
                     /protein_id="HJP24594.1"
                     /translation="MSVVELRAAVALLGRFPALSGVDLTIHAGETVLLRGPNGAGKTT
                     LLHLCAGLLRPESGEVRVLDHDLTEVVGRRSVRRRVALLGHATGLYDDLTVGENLRFW
                     ARAAGLSAADADRRTDEARSRLEVPDRLLDQPVHTLSAGQRRRTSLASLVVRRPELWL
                     LDEPHAGLDQAGRDLVDALIGDAVAAGGTVVVSSHELDRVAALSPRTVTLAGGAVVDA
                     SATDDGGIR"
     gene            966..1649
                     /locus_tag="QGG16_04645"
     CDS             966..1649
                     /locus_tag="QGG16_04645"
                     /inference="COORDINATES: protein motif:HMM:NF015344.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HJP24595.1"
                     /translation="MSTLRTVLRDARLVAGRDLRIEARSRVVVDQVLPFAVLVLVLFG
                     FALDADHSTLRTFAPGLFWVTVLLSALLAIQRSASLDSADGTGTSLRMSGLSPVARYL
                     GRTTAVFVQLLVLEALLVGGLVVLYGVSVEEWFLLVVAGVAAGVAVAAAGTLYGALAS
                     GLRARETLLPILVLPVLAPVLIGATRAFDDALGVAAVDGWAWTGLLAVAALVLTVVGA
                     SAHGALVED"
     gene            1677..>2444
                     /gene="ccsA"
                     /locus_tag="QGG16_04650"
     CDS             1677..>2444
                     /gene="ccsA"
                     /locus_tag="QGG16_04650"
                     /inference="COORDINATES: protein motif:HMM:NF013725.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcsA"
                     /protein_id="HJP24596.1"
                     /translation="MSPAPLPEGTASDTTGSRGSRLLGVLALVGLAVLGVLAFVLTDP
                     DVRIHPSTGAEFGQFDAVRMLYVHVPLAVMTYLAYGLCAVASLGVLIRRTPWWDVTAH
                     AAAEVGTVFCGLVLVTGSIWGRPVWNTWWEWGDVRLMTTLVLFLMFAGYLALRRTTGD
                     PRAVSRRAAVVALVAVLDLPLVNRSVEWWENRTLHQQSTLGDLKIEDLTLFTLMLGFL
                     VLGMVLAWLLLHRFRVGWLERAALDHSVAAAIVERRGE"
BASE COUNT          296 a          806 c          874 g          468 t
ORIGIN      
        1 cttccaagtc gtggaggttg accacctcgc ccacccagtc ggggatcccg gcatcgggct
       61 gcgtgggtcg aacctccacg atcgaggtgg tggcggtccg accgttgccc gcttcgtcgg
      121 ccggaccgcc accacgcgaa ccggtcaggg tggagtcgtc gccgccccca caggctgcgg
      181 ctagcagcat caggcccgag agcactggcg cccaccaacc agcgaaacag cgtcggaagg
      241 cgtcggacat ggggtcaggg tacgaccggc cggtaccgtg acggggtgtc ggtggtcgag
      301 ttgcgcgccg cggtcgcgct gctggggcgc tttcccgccc tgtccggcgt ggacctgacg
      361 atccacgccg gtgagacggt cctcctgcgg ggccccaacg gggccggtaa gacgaccctg
      421 ctgcatctgt gcgctggtct gctacgtccc gagtccggcg aggtgcgggt actggaccac
      481 gatctcaccg aagtggttgg ccgtcgatcg gttcggcgtc gggtggcgct cctaggccac
      541 gcgaccgggc tgtacgacga tctcaccgtg ggggagaacc tacgtttctg ggctcgggcc
      601 gccggcctgt cggctgccga cgccgatcgt cggaccgacg aggctcggtc ccgcctcgag
      661 gtacccgacc gtctgctcga tcagccggtc cacacgctct cggccggcca gcgtcgccgg
      721 acgtcgttgg cctccctggt ggtccgccgg cctgaactgt ggctgttgga cgagccgcac
      781 gccggcctcg accaggcggg ccgtgatctc gtcgatgcgt tgatcggtga tgcggtggcg
      841 gccggtggca ccgtggtcgt gtcgtcccat gaactggacc gggtggcggc cctctcccca
      901 cggacggtga cactggccgg gggtgcggtg gtcgacgcgt cggcgaccga cgacggggga
      961 atccgatgag cacgctgcgg accgttctgc gcgacgcccg actagtcgcg ggacgtgacc
     1021 ttcgtatcga ggcccggtca cgggtcgtag tcgaccaggt tctgccgttc gcggtgctcg
     1081 ttctggtgct gttcggcttt gctctagacg ccgaccattc gacccttcga accttcgccc
     1141 ctgggctgtt ctgggtgacc gtgctgttga gtgccctgct ggccatccag cggtcggcct
     1201 cgctggattc tgccgacggt acgggcacct cccttcgcat gtcaggtctc tcaccggtgg
     1261 cccgctacct gggacggacg actgctgtat tcgtccagtt gctggtgctc gaggcgttgc
     1321 tggtcggcgg actcgtggtg ctctacggcg tgagcgtgga ggaatggttc ctgctggtgg
     1381 tggccggtgt ggcagccggg gtcgccgtgg cggccgccgg taccctctat ggcgcgctgg
     1441 cctcggggct gagggcgcgg gagaccctcc tgccgatcct cgtgcttccg gtgctagcgc
     1501 cggtgctgat cggggccacc cgggcgttcg acgatgccct cggtgtcgcg gcggtcgacg
     1561 gctgggcatg gaccggtctg ttggctgtgg ccgccctggt cctcaccgtg gtcggtgcgt
     1621 cagctcacgg cgcattggtc gaggactgac cgggagcccc gatggccgaa gaacccatga
     1681 gcccagcacc cctgccggaa ggcacggcaa gcgataccac tgggtcgcgc ggttcgcgcc
     1741 tgctgggtgt gctcgccctc gtcggcctgg ctgtactcgg agtgctggcc ttcgtcctca
     1801 ccgatcccga cgtccggatc cacccttcta cgggagccga gttcggacag ttcgatgccg
     1861 tgcggatgct ctacgtgcac gtgcctctgg ccgtcatgac ctatctggcc tacgggctct
     1921 gtgcggtggc cagcctcggg gtcctgattc ggcgcactcc gtggtgggac gtcacggccc
     1981 acgcggcggc cgaggtggga acggtgttct gcggattagt gctggtcacc ggctccatct
     2041 ggggtcgacc ggtgtggaac acctggtggg agtggggcga cgtcagactc atgaccacgc
     2101 tcgtcctctt cctgatgttc gccgggtacc tagccctgcg acgcaccacc ggagaccccc
     2161 gggcggtctc ccgtcgggcc gccgtggtgg cgcttgtcgc cgtactggac ctcccgctgg
     2221 tcaaccggtc ggttgaatgg tgggagaacc ggaccctgca tcagcagtcc accctcggcg
     2281 acctcaagat cgaggacctc accctgttca ccctgatgct gggctttctc gtgctgggca
     2341 tggttttagc ctggttgcta ctgcatcggt tccgggtggg gtggctggag cgggcggccc
     2401 tggaccactc ggtggcagcc gccattgtcg agcgtcgcgg tgag
//
LOCUS       DASCMR010000187         3315 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000908175, whole genome shotgun sequence.
ACCESSION   DASCMR010000187 DASCMR010000000
VERSION     DASCMR010000187.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3315)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3315)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3315
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000908175"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..821)
                     /locus_tag="QGG16_04655"
     CDS             complement(<1..821)
                     /locus_tag="QGG16_04655"
                     /inference="COORDINATES: protein motif:HMM:NF042769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJP24597.1"
                     /translation="MTLRWTSMTDVDREREYSPSSCLADGDYQPYVVHYRRASDAAWS
                     RVLERSESSTHAIAFGDLGTRTIDVAVPTSDQPVPLLAFIHGGYWQELTAADSRFAAD
                     ACLSRGWGFAAIDYTLAPDASLDQIVEECCQAVRSLADRAESLGVDATRLVLAGSSAG
                     AHLAAMAAINSGEDGPERAGTNTGVAGVVLVSGIFELEPLIDTSINEQLGLDRPSAQR
                     NSPLGLDVAGIPTALVAYGSDETSEFKAQSDAFGRHLEAAGTAVSMLEIAGRNHF"
     gene            903..1376
                     /locus_tag="QGG16_04660"
     CDS             903..1376
                     /locus_tag="QGG16_04660"
                     /inference="COORDINATES: protein motif:HMM:NF024854.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HJP24598.1"
                     /translation="MSSRRAPFLGRYLPYLLRQADQTLSAPFYAALNRSGVARSEWRV
                     LVVLEELGELRVAELATASLSPQPTVTHALQRLEERGLVTRTVSSEDRRQRVVAITAE
                     GSLLTTALMDEATRLEAEALAGAGDLTELVRHLREVTAFLDSGAGAVAGHQAPAE"
     gene            1402..1956
                     /locus_tag="QGG16_04665"
     CDS             1402..1956
                     /locus_tag="QGG16_04665"
                     /EC_number="1.13.11.6"
                     /inference="COORDINATES: protein motif:HMM:NF009763.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000334 - 3-hydroxyanthranilate
                     3,4-dioxygenase activity [Evidence IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyanthranilate 3,4-dioxygenase"
                     /protein_id="HJP24599.1"
                     /translation="MTEYDPDPLDRRPFNLGAWIRDHREELTPPVANRQIWRDADMIV
                     MIVGGGNERNDFHDDPREEFFYQILGDMDLVIWSEEGTEPFHMPIREGDVYLLPPGVR
                     HSPQRPDPDSVGLVVEYQRPIGELDGFEWVCFSCARLVHRVELQLQAIDADLPPLFAA
                     FNEDEGARTCPNCGTLHPGTGARL"
     gene            1962..3218
                     /gene="kynU"
                     /locus_tag="QGG16_04670"
     CDS             1962..3218
                     /gene="kynU"
                     /locus_tag="QGG16_04670"
                     /EC_number="3.7.1.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR01814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030429 - kynureninase activity [Evidence
                     IEA];
                     GO_process: GO:0019441 - tryptophan catabolic process to
                     kynurenine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="kynureninase"
                     /protein_id="HJP24600.1"
                     /translation="MSTPTGVRLDASQLDAADPLAGLRYEFEIPDGTYLIGNSLGALP
                     RAARDHVVAEFDRWATLGGEGHDTGDLAWKGYHELLTRQLADITGAHADEVVAMNSLT
                     VNLHLLLVSFYRPTANRHKILIEDHAFPSDHFAVESQIRQRGFDPETSLVTVSPREGE
                     ETLRPEDLLAVIAEHGEELSVVLLPGVQYYTGQVLPMADVVVAGHEVGAMVGFDLAHA
                     IGNIELDLHEWGVDFAVWCSYKYLNGGPGGVGGAFVHRDHVDDPDLPKFLGWWGTDPS
                     TRFEMATRFVPIPTVESWQLSNAPVLPMAALRASLDVIEQAGGMSVLRAKAERQIGFL
                     DRRLAETLAGRVENVTPKALAERGCQHALRVVAGDGQRVFRALQEERVYGDWREPDVI
                     RVAPVPLYNSFADIDRLIDVLDRIVS"
BASE COUNT          537 a         1061 c         1105 g          612 t
ORIGIN      
        1 tcgaagtggt ttcgcccggc gatctccagc atggagaccg ccgtaccggc cgcttcgaga
       61 tgtcggccaa aggcgtcgga ctgagccttg aactccgagg tttcgtcgga tccgtaggcc
      121 acgagcgcgg tcgggatgcc ggccacgtcg agccccagtg gactgtttcg ttgggccgat
      181 ggtcggtcga ggccgagttg ctcattgatc gacgtgtcga tcaacggttc caactcgaag
      241 atccccgaca ccagtaccac gccggcgacg cctgtgttgg tgccggctcg ttccgggccg
      301 tcttccccgg agttgatggc ggccatggcc gcaaggtgcg ccccagctga actcccggcg
      361 aggactagac gggtggcgtc gacgccgagt gattcggccc ggtctgccag ggagcggacg
      421 gcctggcaac actcctcgac gatctggtcg agtgatgcat ctggggcgag ggtgtagtcg
      481 atcgccgcaa agccccatcc ccgggagagg caggcgtcag cagcgaagcg tgagtccgct
      541 gccgtgagtt cctgccaata tccgccatgg atgaatgcca gcagcggaac gggctggtcg
      601 ctggtgggga cagcgacgtc gatggtccgg gtacccaaat ccccgaatgc gatggcgtgg
      661 gtggatgatt cggaccgctc caggacgcga gaccatgcgg catcgctggc ccgtcggtag
      721 tgcaccacgt agggctggta gtcaccgtcc gcgaggcagg aactcggcga gtactcacgt
      781 tcccggtcga cgtcggtcat cgacgtccag cgcagggtca tgtgatcggt cccctcggtc
      841 ggatctggtt aaaggtcatc ggtgcgttga caatagattc ttatgaatat attctgcaaa
      901 ccatgtcgtc acgccgggcg cccttcctgg gtcgctatct cccttacctg ctccggcagg
      961 ccgaccagac gttgtcggca ccgttctacg ccgctctcaa ccgatctggt gtggctcgct
     1021 ccgagtggcg ggtcctcgtc gtcctcgagg agctcgggga actgcgggtg gccgagttgg
     1081 ccactgcgtc gctgagtccc cagccgacgg tgacccacgc actgcaacgg ctcgaggagc
     1141 ggggcttggt gaccaggacg gtcagctcgg aggaccgacg ccagcgggtc gtggccatca
     1201 cggccgaggg ttcgttgctg accaccgcgc tcatggacga ggccacccgt ctcgaggccg
     1261 aggcgctggc cggtgcgggc gacctgaccg agttggtcag acatctgcgg gaggtcacgg
     1321 cgttcctgga ttctggtgcc ggggccgtgg cgggccacca ggctcccgct gagtgaaccg
     1381 ggcaccatgg aggagacagg catgaccgag tacgacccgg atccgttgga tcgacgaccc
     1441 ttcaacctcg gggcctggat ccgtgaccac cgtgaagagc tcaccccacc ggtagccaac
     1501 cggcagattt ggcgggatgc cgacatgatc gtgatgatcg tcggcggcgg aaacgaacgc
     1561 aatgacttcc acgacgatcc gcgggaggag ttcttctacc agatcctggg agacatggac
     1621 ctagtgatct ggtcggagga gggcactgag ccctttcaca tgccgatccg cgagggcgac
     1681 gtctacctgc ttcctcccgg tgtccggcac tcgccccagc gcccggatcc cgattcggtc
     1741 ggactggttg tcgagtacca gcgacccatt ggggagctag acgggttcga gtgggtctgc
     1801 ttttcttgtg cccgcctcgt ccaccgggtc gaactccagc tccaggccat cgatgccgac
     1861 ctcccaccgc tcttcgctgc tttcaacgag gacgagggcg cccggacctg ccccaactgc
     1921 gggaccctcc atcccggcac cggggcccgt ctgtgaatcc cgtgtcaacg ccgaccggcg
     1981 tcaggctcga tgcatctcaa ctggacgccg ctgatccgct ggccggcctg cgctacgagt
     2041 tcgagattcc cgatggcacc tacctcatcg gaaactcgct cggggctctt ccgagggctg
     2101 cacgtgatca cgttgtcgcc gagtttgacc ggtgggccac gctcggcggc gagggccatg
     2161 acaccgggga tctggcgtgg aagggctacc acgagctgtt aacccggcaa ctggctgaca
     2221 tcaccggcgc ccacgcggac gaggtcgtgg ccatgaactc attgaccgtc aaccttcacc
     2281 tgctcctggt cagcttctac cgaccgacgg cgaaccgcca caagatcctg atcgaggacc
     2341 acgccttccc gtcagaccac tttgctgtcg agtcccagat tcgccagcgc ggctttgatc
     2401 ctgagacgtc gttggtcacc gtttccccac gtgagggaga ggagacgctt cgacccgagg
     2461 atcttctggc ggtcattgcc gagcacggcg aggagctgtc ggtggtactc ctgcctggcg
     2521 tgcagtacta cacgggccag gtgttgccca tggccgacgt ggtggtcgcc gggcacgagg
     2581 tgggtgcgat ggtcgggttt gaccttgccc atgccattgg caacatcgag ctcgacctcc
     2641 acgaatgggg cgtcgatttc gccgtctggt gctcctacaa gtacctgaac ggcggcccag
     2701 ggggcgtggg tggggcgttt gtccaccgcg accatgtcga tgatccggat cttcccaagt
     2761 tcctcggctg gtggggcacc gatccttcga cccggttcga gatggccacc cggttcgtgc
     2821 ccatccccac cgtggagtcg tggcagctgt caaatgcccc cgtccttccg atggcggccc
     2881 tgcgggcatc gctcgacgtg atcgagcagg ccggtggcat gagcgtgctg cgggccaagg
     2941 ccgagcgcca gatcgggttc ctcgatcgac ggttggccga gaccctcgcc ggccgggtcg
     3001 aaaacgtcac gccgaaggcg ctggccgagc gtgggtgtca gcacgcgctg cgggtggtag
     3061 ccggcgacgg tcaacgggtc ttccgggccc tgcaggagga gcgggtgtac ggcgactggc
     3121 gcgagcctga cgtgatccgt gttgcccccg tcccgctcta caactcgttc gccgacatcg
     3181 accgcctcat tgatgtcctg gaccggatcg tctcgtgacg ggtcaaatga cggtggtcgg
     3241 cggcggacag gccggtgcgc tgctctcgat ctacctagcg cgccagggtc acgacgtgac
     3301 gctctacgag agccg
//
LOCUS       DASCMR010000188         1756 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000911349, whole genome shotgun sequence.
ACCESSION   DASCMR010000188 DASCMR010000000
VERSION     DASCMR010000188.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1756)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1756)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1756
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000911349"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..222
                     /locus_tag="QGG16_04675"
     CDS             <1..222
                     /locus_tag="QGG16_04675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24601.1"
                     /translation="ALIFRDSLTSLDGDGTPADPQLVADSIVRAATDPSTPFRTLVGG
                     DAELIDATKTSMSFEDFETTMRAALDWHD"
     gene            complement(256..564)
                     /locus_tag="QGG16_04680"
     CDS             complement(256..564)
                     /locus_tag="QGG16_04680"
                     /inference="COORDINATES: protein motif:HMM:NF039182.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5654 family protein"
                     /protein_id="HJP24602.1"
                     /translation="MSDFRENVEKLNIRGIVMSSVMTAFGLVVALSWKDAINGLVARI
                     LPNSDGGSLLSLFITAGAVTLLVVVLASVALRINRRLEGQLERLTDQLEKVGDLFERD
                     "
     gene            779..>1756
                     /locus_tag="QGG16_04685"
     CDS             779..>1756
                     /locus_tag="QGG16_04685"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJP24603.1"
                     /translation="MAFLLNPPPTGGGWGLTTTPPSQARPLISLPSVPRINTNTSDVI
                     VIGAGIVGLAAAHALLLAGNSVRIVEQSEPGIGQSTRTGGGIRLAHGSEMNVRLTQLS
                     LPTWLNFEEQFGIDPHYQETGHLFLSTEDTGGLTTQAGLLESLGVHCDVLSKGEISQR
                     WPTLDSMDFTAGNYCKTGGYLDQHRVIKGFAQTIQAGGAHLELRTRVEGILRDGDKVT
                     GVHTSEGSFTSGTVVNAAGPHAGVISALAGLEIPFVSRRHELLILEQTARVPEGIPWL
                     IDTDHQVHMRPDGSGRALVGGFLGHDDPDDPDDYDPALSERWSTTVREQA"
BASE COUNT          377 a          576 c          481 g          322 t
ORIGIN      
        1 gccctcatat ttagggattc gttgacgagc ctcgacggag acgggacccc agccgacccc
       61 caactcgtcg ccgattccat tgttcgtgct gccactgacc cctcgacacc atttcgaacg
      121 ctggttggcg gggacgccga acttatcgac gcaaccaaga cctccatgag cttcgaggat
      181 ttcgaaacca cgatgcgtgc cgccctcgac tggcacgact gacatcgact agctgagcag
      241 gggcctgaac cagtgtcagt ccctctcgaa gaggtcgccc accttctcga gttggtcggt
      301 caaacgctcc agctgaccct ccagccgacg gtttattctt agggctacgg aggccagcac
      361 gaccacgagc agggtcactg cacccgccgt gatgaacagg ctgagcagcg aaccgccatc
      421 ggagttcggg aggatccggg ccaccagacc gttgatggcg tccttccagg acagggcaac
      481 taccagaccg aacgccgtca tcaccgacga catcacgatc ccgcggatat tcagtttctc
      541 gacgttctct ctgaagtcgc tcatgttcgc cgcttctctc cgtcagacct tcggcccgct
      601 gctcggtcat cgtaggcgag acccgcaaaa ctgcagtcca gacaagtcga cggtgccgca
      661 tacggttgga ttggacaccg ttttgggctg aaaaagcaga aagaccgccc taaggcggcc
      721 gaaatgatgt cgacgacccc aattatacca cacctaattt ttcgatgtcg gatcgtgggt
      781 ggcgtttctt ctgaaccccc cgcccacagg gggggggtgg gggttgacca cgaccccacc
      841 atcacaggca agaccattga tctccctgcc tagtgttccg aggatcaaca cgaacacaag
      901 tgacgtcata gtcatcgggg caggcatcgt cgggcttgcc gccgctcacg ccctcctgct
      961 tgcgggaaac agcgttcgga ttgttgaaca gtccgaacca gggataggcc aatcgaccag
     1021 aaccggtgga ggaatccgcc tcgcccacgg atccgaaatg aacgtccggt tgacccaact
     1081 cagcctgccg acttggctca acttcgagga acagttcggc atcgaccccc actaccaaga
     1141 aaccggccac ctcttcctct ccacggagga caccggaggt ttgacaaccc aagccggcct
     1201 actcgagtcg ctgggagtcc actgcgacgt cctaagcaag ggagagatca gccagcgctg
     1261 gccaacgctg gactccatgg atttcacggc tggcaactac tgcaaaaccg gcggctacct
     1321 cgaccagcat cgagtgatca agggattcgc ccaaaccatc caagccggcg gagctcacct
     1381 tgagttgcgc acccgggtcg aagggatcct tcgtgacgga gacaaggtca caggggtcca
     1441 tacctcggaa ggttcgttta ccagcggaac cgtcgtcaat gctgctgggc cacacgccgg
     1501 ggtgatctcc gcactcgccg ggcttgagat cccgtttgtc tcgcgtcgcc acgaactcct
     1561 gatcctggaa cagacagccc gtgttcccga aggcatcccg tggctcatcg acactgacca
     1621 tcaggtgcac atgcgtcctg acggctcggg tcgagcactc gttggcggtt tcctcggcca
     1681 tgacgacccc gacgaccccg acgactatga cccagccttg tctgaacgat ggtcaaccac
     1741 cgtccgcgaa caggca
//
LOCUS       DASCMR010000189         2369 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000914407, whole genome shotgun sequence.
ACCESSION   DASCMR010000189 DASCMR010000000
VERSION     DASCMR010000189.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2369)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2369)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2369
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000914407"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..394)
                     /locus_tag="QGG16_04690"
     CDS             complement(<1..394)
                     /locus_tag="QGG16_04690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012226402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP24604.1"
                     /translation="MNEFSLTLTDEQEQLRDWIHQFCVDVVRPNAEEWDEREEFPWPI
                     VQEAAKIGLYGWDFLAQGMIGDKTGLTMPVAIEELFWGDAGIGMAIMCSGLAAAGIAA
                     SGTQEQVMEWVPQCYGTPDDVLLGAFCAS"
     gene            complement(491..1774)
                     /locus_tag="QGG16_04695"
     CDS             complement(491..1774)
                     /locus_tag="QGG16_04695"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJP24605.1"
                     /translation="MAHDGLRLLARVRAAASVPAVKRHDDGHSPGSGSRPKAPRGFGV
                     VWATVAMDMVGFGILLPVLPLYAEDFGASPATAAALVAVFSAAQMVAAPLWGRLSDRI
                     GRRTVLVAALVGSCLGSLVTGLAGALWVLFAGRILDGFSGSSYAVGQAAVADLAEPED
                     RPRLLGLLAAAFGVGFVAGPLIGSIAALGSRELPFFVAAALAGANAMMALVRLPGGRP
                     VASGTSSPALTANRIALWGSAGLAVRRLALLSLVSMIGFAGFEATFALLVERRFEAVG
                     DPTVYGLFATIGVLMVLVQTRVVGPVNARMGSRPALRAALVSVATGMAVLSFGGGWAG
                     LAVALVLLVVGQGVFGPTLSNATVETVGNGARGTALGLQQGAGALGRIIGPLLAGVLM
                     DQIGVGAPYLVAAALAMVSIALVPVSQVPVAEDQV"
     gene            1766..>2369
                     /locus_tag="QGG16_04700"
     CDS             1766..>2369
                     /locus_tag="QGG16_04700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I tRNA ligase family protein"
                     /protein_id="HJP24606.1"
                     /translation="MSHPDSSADAPAPTIPDRPGLEGLEDLWDAIWEERGTYHVDRTK
                     VRADVFSIDTPPPTVSGSLHVGHVFSYTHTDTIARYQRMAGREVFYPMGWDDNGLPTE
                     RRVQNYFGVRCEPALPYDPNFAAPDDAGDPKAIKKRGDIDISRRNFIELCHVLTAEDE
                     QAFEALFRRLGLSVDWTQHYATIDERCQRVSQRAFLRNLAR"
BASE COUNT          475 a          915 c          663 g          316 t
ORIGIN      
        1 cgctggcgca aaacgccccg agaagcacat catccggggt cccgtagcac tgcggtaccc
       61 attccatgac ctgttcctgc gtgcccgatg cggcaattcc cgcagcggcc aagccggaac
      121 acatgatggc catgccgata ccggcatcgc cccagaagag ttcctcgatg gccaccggca
      181 tggtcaggcc ggtcttgtcg ccgatcattc cctgggccag aaagtcccag ccgtacaggc
      241 cgatcttcgc cgcctcctgc acgatgggcc acgggaactc ttcgcgctcg tcccactcct
      301 cggcgttcgg tcggaccacg tccacgcaga actggtggat ccagtcgcgc aactgctcct
      361 gctcgtcagt cagggtgagg ctgaactcgt tcaaggtgtt gctcccgatg tcagtggctc
      421 cacggccgga tggctagcgg gcggacgcca gcaggttacc cattggtaac ttgtagcgcc
      481 agtacagacc tcaaacctga tcttcggcaa ccggcacctg agatacggga acgagggcga
      541 tggacaccat ggccagtgcg gcggccacca ggtacggcgc ccccacccct atctgatcca
      601 tcagcacccc agccagcagc gggccgatga ttcgacccag cgcccccgcc ccctgttgca
      661 ggcctagggc cgtcccgcga gcaccattac ccaccgtctc gaccgtggcg ttggacagcg
      721 tcgggccgaa gaccccttgg cccaccacca gcagcacgag agccacggcc agcccggccc
      781 acccaccgcc gaacgagagc accgccattc cggtggccac cgacaccaac gcggcacgca
      841 gcgccggacg gctccccatc cgggcgttga ctggtccaac cacacgggtc tggaccagga
      901 ccatcagcac gccgatcgtc gcaaacaacc catacaccgt cggatcacca accgcttcga
      961 agcgtcgttc caccagcagg gcgaacgtcg cctcgaaccc tgcgaacccg atcatcgaga
     1021 ccagcgacaa cagagcgagg cgacgaaccg ccagcccggc tgacccccag agggctatcc
     1081 gattggcagt cagcgccggt gacgacgtac cggaagcaac cggtcgaccg ccgggaaggc
     1141 gcaccaacgc catcatcgca ttggctccag ccaaggcagc cgccacgaag aacgggagct
     1201 cccgactgcc cagtgcggca attgatccga taagcggccc ggccacgaac cccacaccga
     1261 acgccgcagc gagcagtccc agcagcctcg ggcggtcttc aggttcggcc aaatcggcca
     1321 ccgccgcctg gcctaccgcg tacgacgatc ccgagaatcc gtccaagatc cggccggcga
     1381 acaacaccca caacgccccg gctagcccgg tcaccaagct ccccagacag gacccgacca
     1441 gcgcagccac cagcacggtc cgcctgccga tccggtctga caatcgaccc cagagcggag
     1501 cggccaccat ctgggctgcc gagaacacgg ccaccaacgc cgcagcggtg gccggtgacg
     1561 cgccgaaatc ctcggcgtac aacggtagaa ccggcagcag gatgccgaat ccgaccatgt
     1621 ccatggccac cgtggcccac accacaccga atccccgagg agccttcggg cgcgacccgc
     1681 tgcccggaga atggccatca tcgtgacgct tcacggcggg cacgctagcg gcggcccgaa
     1741 ctctcgccag tagcctcagg ccgtcatgag ccaccccgac tcctcggccg acgcgcccgc
     1801 ccccaccatc cccgaccgcc ccggactcga gggcctcgag gacctatggg acgccatctg
     1861 ggaagagcgg ggtacctatc acgtcgaccg cacgaaggtc cgcgccgacg tcttctccat
     1921 cgacacgccg ccacccacgg tcagcggatc actccacgtc ggacacgtct tctcctacac
     1981 gcacaccgac accattgccc gctaccaacg gatggccggc cgcgaggttt tctacccgat
     2041 gggatgggat gacaacggcc tgccgaccga gcgtcgggtc cagaactact tcggagtccg
     2101 ttgcgaaccc gcgctgccgt acgaccccaa cttcgccgcc cccgacgatg ccggcgaccc
     2161 caaggccatc aagaagcgcg gcgacatcga catcagtcgc cgcaacttca tcgagctctg
     2221 ccacgtcctc accgccgaag acgagcaggc cttcgaggcc ctgtttcgcc gtctcggcct
     2281 gtccgtcgac tggacccagc actacgccac catcgacgaa cgctgccaac gggtctccca
     2341 acgggccttc ctacgcaatc tggctcgcg
//
LOCUS       DASCMR010000190         4144 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000928907, whole genome shotgun sequence.
ACCESSION   DASCMR010000190 DASCMR010000000
VERSION     DASCMR010000190.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4144)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4144)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4144
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000928907"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1295)
                     /gene="leuC"
                     /locus_tag="QGG16_04705"
     CDS             complement(<1..1295)
                     /gene="leuC"
                     /locus_tag="QGG16_04705"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HJP24607.1"
                     /translation="MPGSDSTRTLSEPRTLSQKVWDRHVVRATGGQPDLLFIDLHLVH
                     EVTSPQAFDGLRMAGRRVRHPELTVATEDHNVPTADIDQPIADPVSRVQIETLRANCD
                     EFGVKNYPMGDPGQGIVHVIGPEKGLTLPGMTVVCGDSHTSTHGAFGALAFGIGTSEV
                     EHVLATQTLPQQRPGTLAVTVNGTLPEGSTAKDVILAIVGRLGTGGGIGSVIEYRGEV
                     IRNLSMEGRMTVCNMSIEAGAKAGLIAPDDTTFEYLAGRPHAPTGAAWDAAVSDWRTL
                     VTDEGATFDHEIVLDGAEITPQVSWGTNPGQVMCMDGNVPDPSSFDEPSQQESAARAL
                     DYMGLTAGTPIRDVAVDTVFIGSCTNSRIEDLRAAAEVVRGRKVKDGIRTLVVPGSWV
                     VKDQAEAEGLPEVFIEAGFDWREPGCSMCLAMNPDKLVAG"
     gene            complement(1382..1594)
                     /locus_tag="QGG16_04710"
     CDS             complement(1382..1594)
                     /locus_tag="QGG16_04710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24608.1"
                     /translation="MDLATETVAEWGITGFPNIADDGEVHLRFGIVGHPAAVAISAGG
                     SLVTDVSELDVQDALNLIDRARSRDT"
     gene            complement(1688..1939)
                     /locus_tag="QGG16_04715"
     CDS             complement(1688..1939)
                     /locus_tag="QGG16_04715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24609.1"
                     /translation="MRRDVGIFVALTLLAAACTSGSHDTQVAEVGAVSEPSRASESEP
                     VPYEIPVELEFTATLVGGELFDGTSVAGQDVLFWFWTPT"
     gene            2058..3530
                     /gene="lpdA"
                     /locus_tag="QGG16_04720"
     CDS             2058..3530
                     /gene="lpdA"
                     /locus_tag="QGG16_04720"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HJP24610.1"
                     /translation="MTRPMVLGLGGSSLVQHDLVVIGGGPAGYAAALYGAAAGLDVGL
                     VEEHLLGGTCLHVGCIPAKELLETASVLRTVRDAATFGVGIPGAGEHEPVVDLAVSQV
                     RKQKVIDGLAKGVASLLKGRDVTVYDGTGRLSAAHVVSIDHGEGDPTLVVAEHIVLAT
                     GSSPRTIPGFEIDGTLVVTSDELLSIDRVPARVAVIGGGAIGCEFASMLSDYGSDVTL
                     LEAAPEILVGCDADVATAIRRSFRRRKIDVHVGTAVHGHRPTDNGATVVSHGPIDSDD
                     ESVDLEVDLVVVSVGRRPRGDSAGLVGTRVVVDERGFVEVDDRLRTGEPGVYAVGDVV
                     ATPQLAHVGFAEGMFVVGDLLGESPKPIDPSTVPWCIYTHPEVAFAGLTEAGAIAAGH
                     DVVVSSHRYVSNGRALIVGETEGLVKVVAEKDADGRAGRILGVHMVGPWVTEQLGQGY
                     LAVNWEATVDEVATFIQPHPTLSELFGETVLSLTGRALHG"
     gene            3548..>4144
                     /locus_tag="QGG16_04725"
     CDS             3548..>4144
                     /locus_tag="QGG16_04725"
                     /inference="COORDINATES: protein motif:HMM:NF012584.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HJP24611.1"
                     /translation="MADVFLPQLGETITEGTITRWFVGVGDSVAVDQPLYEVSTDKVD
                     SEVPSPLAGVLAEIVAGEGALVAVGALLCRVDPAGSTAAAPGTVSDVATGPAAASSPM
                     TSTEPVSSSGSSTADIGGGLGGGVAPPGSTGVGASGSGGSRGSGGSRGSGLLLSPVVR
                     RLLSEHGVDPVRVTGTGVAGRITRADVERFLRDNPGRAE"
BASE COUNT          610 a         1311 c         1490 g          733 t
ORIGIN      
        1 ccggccacca acttgtcggg gttcatggcc aggcacatcg aacagccggg ttcccgccag
       61 tcaaacccgg cctcgatgaa cacctcgggc agaccctccg cctcggcctg gtccttgaca
      121 acccatgagc cgggcaccac cagggttcgg atgccgtcct tcaccttgcg gccccggacc
      181 acctcggcgg ccgcacggag gtcctcgatg cggctgttgg tgcacgagcc gatgaacacc
      241 gtgtcgacgg ccacgtcacg aatcggcgtg ccggcggtga ggcccatgta gtcgagcgct
      301 cgagccgctg attcctgttg actgggttcg tcgaacgagg acgggtcggg gacgttgccg
      361 tccatacaca tgacctggcc cgggttggtt ccccacgaga cctggggggt gatctcggcg
      421 ccatcgagca cgatctcatg gtcgaaggtg gcgccctcgt cggtgaccag cgttcgccag
      481 tcggacactg cggcgtccca ggcggcgccc gtcggggcgt gggggcgacc ggccaggtac
      541 tcgaaggtgg tgtcgtcggg ggcgatcagg ccggccttgg cacccgcttc tatggacatg
      601 ttgcacaccg tcatccgtcc ctccatggag aggttccgga tcacctcgcc ccggtactcg
      661 atgaccgaac cgatgccgcc gcctgtgccc agtcgcccga cgatggccaa gatcacatcc
      721 ttggccgtgg agccctcagg aagcgtgccg ttcacggtca ccgcgagggt ccccgggcgt
      781 tgctggggga gggtctgggt ggccaggacg tgttccacct cgctggtgcc gatgccaaag
      841 gccagggcac cgaatgcacc gtgggtgctg gtgtggctgt cgccgcacac caccgtcatg
      901 cccggcaggg tgaggccctt ctcgggaccg atgacatgga cgatgccctg tccggggtcg
      961 cccatcgggt agttcttcac cccgaactcg tcgcagttgg cccgtagggt ctcgatctgg
     1021 acacggctca ccgggtcggc gatgggctgg tcgatgtctg cggtggggac gttgtggtcc
     1081 tcggtggcaa ccgtcaactc cgggtggcgg acccggcgtc cggccatgcg gagcccgtcg
     1141 aaggcctgcg gggaggtgac ctcgtggacc aggtggaggt cgatgaacag caggtcgggc
     1201 tggccgccgg tggcccgaac gacatggcgg tcccagactt tttggctgag ggtcctcggt
     1261 tcgctgaggg ttctggtgct gtcggaaccg ggcatggtcg ctcctgggca tgcccggcgc
     1321 gtcggccggg cgagatcggg tccgttcagg atacgggtgg ttgggttgca ggtgtcggag
     1381 gtcaggtgtc gcgggaacga gcccggtcga tcaggttgag ggcatcctgc acgtcaagtt
     1441 cgctgacgtc ggttaccagt gacccgccgg cgctaatggc cactgccgcc gggtggccca
     1501 cgatcccgaa ccggagatgc acctcgccgt cgtcggcgat gttgggaaat ccggtgatac
     1561 cccactcggc gaccgtctcc gtcgccaagt ccattcggtc agcgggaatg gtggagacgc
     1621 cgatgacggt gacgcccgga atggtgctca gttcgacgac cgccgaactc tcccttcgac
     1681 acgtcactca cgtgggtgtc cagaaccaga acaggacgtc ttggccggcc acgctggttc
     1741 catcgaacag ctcgccgcct accagggtgg ccgtgaactc cagctcgact ggaatctcgt
     1801 acggcacggg ttctgactcg gacgcccgag acggctccga gaccgccccg acctcggcga
     1861 cttgcgtgtc gtgggatccg gatgtgcagg cggcagcgag gagggtcagg gccacgaaga
     1921 tgccgacatc tcgtctcacg ctgcgaccct aggcggggta ccgtcgctgc catgagcacg
     1981 aggatgctga tcatctctgc actcttgtgt ggcatggccc tcctggtggc cttcaccgtg
     2041 caggtggtgg tggcccggtg acccgaccca tggttctggg cctcggtggg tcgtcgctgg
     2101 ttcagcacga tctcgttgtc atcggtggtg gcccggcggg ctacgcggcg gccctgtacg
     2161 gcgcagctgc cggcctcgac gtcggcctgg tcgaggaaca cctgctgggt ggcacctgcc
     2221 ttcacgtcgg gtgcattccg gccaaggaac tgctggagac ggcctccgtg ctgcgaaccg
     2281 tccgcgacgc tgccaccttc ggggtgggca tccccggggc tggtgaacac gaaccggttg
     2341 tcgacctggc agtgagccag gtccgcaagc agaaggtcat cgatgggttg gccaagggag
     2401 tggcgtcgct cctaaaaggc cgggatgtca ccgtctatga cggaaccggt cgattgagtg
     2461 ccgcccacgt cgtgtccatc gaccacggtg agggcgaccc caccctggtg gtggctgagc
     2521 acatcgtgct ggccaccggg tcgtcgcccc gcaccatccc cggcttcgaa atcgacggca
     2581 ccctggtggt gaccagcgac gagctgctgt ccatcgaccg ggtgcccgcc cgggtggctg
     2641 tcatcggcgg cggggccatc ggctgtgaat ttgcttcgat gctctcggac tacgggtcgg
     2701 acgtcacgct gctggaggct gccccggaga tcttggtggg atgcgatgcc gacgtggcca
     2761 cagccatccg tcggtccttc cgtcggcgca agatcgacgt ccacgtcggg acagcggtgc
     2821 acggccaccg gccgacggac aacggagcca ccgtcgtgag ccacgggccg atcgattccg
     2881 acgatgagtc ggtcgatttg gaggtggact tggtagtggt ctcggtgggt cgtcggccac
     2941 gcggagactc cgcgggcctg gtcggcacca gggtcgtcgt cgacgagcgc ggtttcgtgg
     3001 aggtggacga tcgacttcgc accggggagc ccggcgtcta tgcggtgggt gacgtggtgg
     3061 ccacgccgca gctggcccat gtgggcttcg ccgagggcat gttcgtggtg ggcgacctgc
     3121 tgggcgaatc accgaagccc atcgacccgt ctaccgtgcc gtggtgcatc tacacccacc
     3181 cggaggtggc attcgccggg ctgaccgaag ccggggcgat cgccgccggc cacgacgtgg
     3241 tggtgagcag ccaccggtac gtctccaacg gccgggcctt gatcgtgggt gagaccgagg
     3301 gtctggtgaa ggtggtggcc gagaaggacg ccgacggccg ggcgggacgg atcctgggcg
     3361 tccacatggt cggaccatgg gtcaccgagc aactcggaca gggctatctg gccgtcaact
     3421 gggaggccac ggtcgacgag gtggcgacct tcatccaacc ccacccgacc ctcagcgaac
     3481 tcttcggcga gacggtgctg tcgctgaccg gccgcgccct tcacggctga tcagcggatc
     3541 gatcgacatg gccgacgtct tccttccgca actcggtgag acgatcaccg aggggaccat
     3601 tacccgctgg ttcgtgggcg tcggtgactc ggtggccgtc gaccagcctc tgtacgaggt
     3661 ttccaccgac aaggtcgact cggaggtgcc gtccccgctg gctggtgtgc tggccgaaat
     3721 cgtggccggc gagggagcgc ttgtcgccgt cggagcgctc ctctgccgtg tcgatcccgc
     3781 tggctccacc gctgctgcac ccgggacggt ttcggacgtc gccactggcc cggccgctgc
     3841 gtcttcccca atgacatcga ccgaaccggt gtcgtcgtcg ggatcgtcga cagccgacat
     3901 cggtggtgga ctgggcgggg gtgtcgcgcc gccagggtcg accggggtgg gggcatcagg
     3961 gtcaggcggg agccggggtt ctggaggcag tcgtgggagc ggactgctat tgagtccggt
     4021 ggtgcggagg ttgttgtccg agcatggggt ggatccggtc cgggtgacgg ggacgggggt
     4081 ggccgggcgc atcacccggg ctgacgtaga gaggttcctt cgggacaacc ccggccgggc
     4141 cgag
//
LOCUS       DASCMR010000191         7886 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000938036, whole genome shotgun sequence.
ACCESSION   DASCMR010000191 DASCMR010000000
VERSION     DASCMR010000191.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 7886)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7886)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7886
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000938036"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(14..751)
                     /locus_tag="QGG16_04730"
     CDS             complement(14..751)
                     /locus_tag="QGG16_04730"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012673.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HJP24612.1"
                     /translation="MRDHELAGLLAQEAGDVLLGVLAEGRAGGWTPSQIQDQGDHRAH
                     EHLMARLSELRPEDAVLSEEGSDDRARLGADRVWIIDPLDGTRDFARAGSVEWAVHVA
                     LVEDGVPTAAAVSLPPSGGLYGTWVSVVDRTSNRDRPIIVTSRSQWGEAEEVAAAIGG
                     VVRSCGSAGVKAMAVVSGAVDVYVHPSGLYEWDACAPAGVAMAAGLDVSGIDGSQLVF
                     NKPRPVVAGLVVSSPEYTDRVLSALHW"
     gene            833..1768
                     /locus_tag="QGG16_04735"
     CDS             833..1768
                     /locus_tag="QGG16_04735"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HJP24613.1"
                     /translation="MAHGRITGWATHLPERRLTNHDLAEIVDTTDEWIRERSGIGARH
                     VDGKVTEMSAEAGRDALAMAGVDPADVDLLLLATCSSDQQFPASASVVQQELGMSCGA
                     IDLNAACSGFVYGLVTAMQFAEGGMETILLIGSDALSGITDWTDRGTCVLFGDGAGAV
                     VIQRSADAPTLLGWDLMSDGSAASILTCEHGGKIFMNGKEVFRRAILAIEGAATRALE
                     RAAVSMDDIALVVPHQANIRIIEAALKRLGIPIGKAAMVLEHTGNTSAASIPLAFVDA
                     LGKGRVDPGDLVLMVGFGAGMSSAAAVVRWDPPGA"
     gene            1796..3784
                     /locus_tag="QGG16_04740"
     CDS             1796..3784
                     /locus_tag="QGG16_04740"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HJP24614.1"
                     /translation="MLTATGLSRAFGPRLLFHDVALQLGAGRRVALVGGNGTGKTTLI
                     ETIVGLQEPDTGEVHRPRDLRIGYLPQELPTETGRSVFEQVMLGAGPVTELATRIEDL
                     GVRIGAASGDEQARLLDQFGEAQSRFEQIGGYAVEADAHRILSGLGFDSADHDRPMDE
                     MSGGWRMRIALARLLLSAPDLLIMDEPTNHLDVDSVAWLEQHLANWSGGLLFVSHDRD
                     FIDAVANRILELSGNRITEYVGGFAEFVVAREEQLAAQRAIAAQQSRQVAQTEKFIER
                     FRYKASKARQVQSRVKALEKLDRMVVDKPDDPASRFGFPKPRRSSRLVAELHDVTAGY
                     PAAGGTSVPSSDQSGNEPGDEIILRNVTFDVERGRKVALVGPNGAGKTTLVRLLTGDM
                     PPLAGQVTRGTNVDLSHFDQLSAEILDDQRTVLDEFKTVPGVGVDGRNPRTYLASFGF
                     RGDAVDRRVGDLSGGEQTRLALAKTLAVPVNLLVLDEPTNHLDLPSCDVLEDALLAYP
                     GTVVLITHDRHLIRSVADCAVEVRDGRATWHEGVPDRVLYPVKVDSTPAPSSHGATAR
                     RGNGTPDGNQKGGGQSAGKGRQRDPRQGLQRKLGRAEKQWEAAEAAVVEVQERLADPN
                     LYQDPDGAAAVVAEHEAAKDRAAELMAEWERLNLQLAD"
     gene            3850..4677
                     /gene="surE"
                     /locus_tag="QGG16_04745"
     CDS             3850..4677
                     /gene="surE"
                     /locus_tag="QGG16_04745"
                     /EC_number="3.1.3.5"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008253 - 5'-nucleotidase activity
                     [Evidence IEA];
                     GO_function: GO:0008254 - 3'-nucleotidase activity
                     [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HJP24615.1"
                     /translation="MRILVTNDDGIDSVGLHELARALVDLGEVTVVAPDAEYSGAGAS
                     LGAMHLIRPEVHDATIDGIDRSWSVSGPPGLCVIYSRLGLFGDPFDLVVAGINPGMNV
                     GRSVYHSGTVGAALTARNGGTTGIAVSQAVTGWGIEGQGADEVLIDQHWATAATVARS
                     VVEAMAQNPPDTAEVLNVNVPNIPLGELQGWRHTVTGSAPPRSLTTADMVPKEGHAGS
                     YRVEMHWGEAGELPVDTDGGAVMAGLVSLSRLNRLHDEPPPANDPAARGLDDLLGRA"
     gene            4674..5264
                     /locus_tag="QGG16_04750"
     CDS             4674..5264
                     /locus_tag="QGG16_04750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24616.1"
                     /translation="MTEPGSTPVWYVAYGSNLLAARFDAYLQSCGDDTPWGSHRGATD
                     PRPATGDRRVVVPHPVFFGGHSSRWGGGCCFCPDEPTSAGRRDVVGRAWRITWDQMAD
                     VVAQENGRPTEDAFLPSEPPASGESVRVLDGIIDLLIGMDRIDDEPVCTLGSTAPPPA
                     GPPSMSYRAVLAAGMAEMGLQPEEAEQHLLDLDRSR"
     gene            complement(5346..6128)
                     /locus_tag="QGG16_04755"
     CDS             complement(5346..6128)
                     /locus_tag="QGG16_04755"
                     /inference="COORDINATES: protein motif:HMM:NF024950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HJP24617.1"
                     /translation="MSRETGRLAGKVACITGAGSGLGRAMALRFAEEGATIAAQDLRE
                     EAADETVKLLDGDGHRAFGGDVCDEGDMVSMFAQIDGNWGCLDVQVNNAGVSRLPGDG
                     FDEMMAGQGSQMSLMGYEAFFKMMAIHAGGTFLGTREAVKLMGEGGSVITLSSIAGLA
                     GWGPVHYAAAKGAVLGFTRAASRELGAMGIRINAIAPGVIDTPMTADVDEAMLAPMVM
                     MTPLRRQGTAEEVAAAALFLASSESSFITGQWISPNGGLITI"
     gene            6234..6662
                     /locus_tag="QGG16_04760"
     CDS             6234..6662
                     /locus_tag="QGG16_04760"
                     /inference="COORDINATES: protein motif:HMM:NF024055.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin family protein"
                     /protein_id="HJP24618.1"
                     /translation="MNIVVIHQSRTGNTRRAAELIGGAVASAGATVAVRPVTNIDYKE
                     LAEADLVFVGTWVDGLILFGHRPGDVGKVRQIPKLWDKRVAAFMTHAVNPGNAATKLS
                     DVLESHGATVVAARSLNRRHLENEAPLFASEVLASISATT"
     gene            complement(6691..7608)
                     /gene="rarD"
                     /locus_tag="QGG16_04765"
     CDS             complement(6691..7608)
                     /gene="rarD"
                     /locus_tag="QGG16_04765"
                     /inference="COORDINATES: protein motif:HMM:TIGR00688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HJP24619.1"
                     /translation="MRRGLVLIVCAQVMWGLSPAFWRLGIEIPAMDMLGHRVLWTFVT
                     VLVIHLVRRSLRSVHTAARELRTRALEALAGVLIGSNWLVWVWAVTNGRVLEGSLGYF
                     ITPLVSVVLGVVVVGERLRRAQWAAVALGAASVIWLTIDMGGLPWVSLFLAATFGIYG
                     LMKKTVNRPPLDMLTIELMVILPLVLVFLGTRLINGQDALVSASGTEYIVLLGSGLFT
                     AVPLLCFAGAVQRVPLSVIGVIQYLAPSTHFLLGVVAYDEPFGGGRLIGFVLVWTGLA
                     VFTLDGLRSVRSSGRVTGWRPLGQRGQVG"
     gene            7688..>7886
                     /locus_tag="QGG16_04770"
     CDS             7688..>7886
                     /locus_tag="QGG16_04770"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24620.1"
                     /translation="MRIGLLRCDDIFTDLRPEYGGYQQLFTDLFATADGTIESLESPG
                     SLEFVDVPVYLGTFPSALDDYD"
BASE COUNT         1420 a         2801 c         2476 g         1189 t
ORIGIN      
        1 accagtgtac cggttaccag tggagagcgc tcagcacccg atcggtgtac tccgggctac
       61 taaccaccag cccggccacc accggacggg gcttgttgaa caccaactgc gagccgtcga
      121 tgcccgacac gtccaacccg gcggccatgg ccaccccggc cggcgcgcag gcatcccact
      181 cgtagaggcc cgaggggtgg acgtagacgt cgaccgctcc ggacaccacg gccatggcct
      241 tcacgccggc cgagccgcac gaacggacca ccccaccgat ggcggctgcc acctcctcgg
      301 cctcacccca ctgggaccgg ctggtgacga tgatcggtcg gtcccgattc gacgtccggt
      361 cgaccaccga gacccaggtt ccgtacaggc caccgctggg tggcaacgac acggctgctg
      421 cggtcggcac gccgtcctcc acgagggcca catgcaccgc ccactccaca ctgcccgcgc
      481 gggcgaagtc acgggtccca tccagcggat cgatgatcca cacgcgatcg gcaccgagac
      541 gggccctgtc atcgctgccc tcctcggaca gcaccgcatc ctcgggccgg agctccgaca
      601 gacgagccat taggtgctcg tgggcacggt ggtcgccctg gtcctggatc tgagacgggg
      661 tccaaccgcc ggcccggccc tcagctagca cgccgaggag cacgtcaccg gcctcctggg
      721 ccagaagccc ggccagttcg tgatccctca tcgtcgggcg accctaaccc cagccggtgg
      781 ctacccttcc cctggggctg atcggcccca actgcacaca tcggagcacc ccatggccca
      841 cggccgtatc accggttggg cgacccatct tcccgaacgc cggctcacca accacgatct
      901 cgctgagatc gtggacacca ccgacgagtg gatccgtgaa cgtagtggca tcggggcccg
      961 ccacgtcgac ggcaaggtga ccgagatgtc ggcggaggcc gggcgcgacg cactggccat
     1021 ggccggcgtg gaccccgccg atgtggacct cctcctgcta gccacctgca gtagcgacca
     1081 gcaatttccg gcgagcgcct cggttgtcca gcaagagttg ggtatgtcct gtggcgcgat
     1141 tgacctgaac gcggcctgct caggcttcgt ctacggcctg gtcaccgcga tgcagttcgc
     1201 cgagggcggc atggaaacca tcctgctcat cggcagtgat gcccttagcg gcatcaccga
     1261 ctggaccgac cggggaactt gcgtcctatt cggcgatggt gccggcgccg tggtcatcca
     1321 acgctccgcc gacgcaccga cgctgctggg ctgggacctc atgtcggacg gctcggccgc
     1381 gtccatcctg acctgcgagc acggcgggaa gatctttatg aacggcaagg aggtcttccg
     1441 tcgcgccatc ctggccatcg agggtgcggc cactagagcc ctggaacggg ctgccgtgtc
     1501 catggacgac atcgccctgg tggttcccca ccaggccaat atccgaatca ttgaggctgc
     1561 cctgaagcgg ctcggcattc ctatcggaaa ggccgccatg gtgctcgagc acaccggcaa
     1621 cacgtccgcc gcctcgatcc ccctggcctt cgtagacgct ctcggcaagg gtcgggtcga
     1681 tcccggcgac ctggttctga tggtcggatt cggtgccgga atgtcctcgg cagccgctgt
     1741 ggtccgctgg gacccacccg gcgcctgacc cgcctcacaa cccggaccct ccaccatgct
     1801 caccgccacg gggctgtcgc gtgccttcgg tccgcgcctg ctattccatg acgttgcact
     1861 ccaattaggg gccggccggc gggtggctct ggtaggcggc aacggcaccg gcaagaccac
     1921 gctgatagag accatcgtcg ggcttcagga acccgacaca ggggaggtcc atcgaccacg
     1981 ggatctgcgg atcggctacc tcccccagga actgccgacc gagacgggaa gatctgtgtt
     2041 cgagcaggtc atgctgggtg ccgggccggt cacggaactg gccacccgaa tcgaggatct
     2101 cggagtacgg atcggtgccg cgtcgggcga cgaacaggcc cgcctcctgg accagttcgg
     2161 tgaagcccag tcacgcttcg agcagatcgg cggttacgcc gtggaggccg acgcccaccg
     2221 aatcctctcg gggctcggct tcgactcggc cgaccacgac cgacccatgg acgagatgtc
     2281 cggtggctgg cgaatgcgta tcgccctggc ccgcctcctg ttatcggccc ccgacctcct
     2341 gatcatggat gaacccacca accacctcga cgtggacagc gtcgcgtggc tggagcagca
     2401 cctggccaac tggtcggggg gcctgttgtt cgtcagccac gaccgggact tcatcgatgc
     2461 ggtggccaat cggatcttgg aactgtccgg caatcggatc accgagtacg tgggcgggtt
     2521 cgccgagttc gtagtggccc gcgaagagca gttggccgcc cagcgggcca tcgccgccca
     2581 gcagagccgc caggtggccc agaccgagaa gttcatcgaa cggttccgct acaaggccag
     2641 caaggcccgt caggtccaga gccgggtcaa ggccctggag aaactcgacc ggatggtggt
     2701 cgacaaaccc gatgacccgg ccagccggtt cgggttcccc aagccacggc ggtcatcgcg
     2761 tctggtcgct gaactccacg acgtcacggc cggctacccg gccgcaggcg ggaccagcgt
     2821 cccatcgagc gaccagtcag gcaacgagcc gggcgacgag atcatcctgc ggaatgtgac
     2881 cttcgacgtg gagcggggtc gcaaggtggc cctggtcggt ccgaacgggg ccggcaagac
     2941 cacgctcgtc cggctcctaa ccggcgacat gccgccgttg gccgggcagg tgactcgggg
     3001 caccaacgtc gacctttccc acttcgacca actctcggcc gagatactcg acgatcaacg
     3061 caccgtgctc gacgagttca agacggttcc cggcgtgggg gtcgacggtc gcaacccacg
     3121 gacgtacctg gcctccttcg gcttccgagg cgacgccgtc gaccgccgtg tgggcgacct
     3181 gtcaggtgga gagcagaccc gactggcact ggccaagacg ttggccgtcc cggtcaacct
     3241 tctggtacta gacgagccca ccaaccactt agacctgccg agttgcgacg tcctggagga
     3301 cgccctactg gcctacccgg gcaccgtcgt gctcatcacc cacgaccgcc acctgatccg
     3361 atcggtcgcc gactgcgccg tcgaggtcag ggacggcagg gcaacctggc acgagggcgt
     3421 ccccgaccgg gtgctctacc cggtgaaggt ggactcgacg cctgccccgt catcccacgg
     3481 tgcgacggcc cgtcgcggaa acggaacccc ggacggaaac cagaagggcg gtggccaatc
     3541 tgccgggaag ggtcgccaac gcgatccacg acagggcctc cagcggaagt tggggcgggc
     3601 cgaaaagcag tgggaggccg ccgaagccgc cgtggtggag gtccaggagc gtctggccga
     3661 ccccaacctg taccaggacc ccgacggtgc cgccgccgta gttgccgagc acgaggcggc
     3721 caaggaccgg gccgccgagc tgatggccga atgggaacgc ctcaacctac aactcgctga
     3781 ctgaccaggg cccgctgacc aacgccccac tggccaacca ggtcgcgacg ctcactacgg
     3841 tcgggaacca tgcgaattct ggtcaccaac gacgacggca ttgactcggt gggcctccac
     3901 gaactggccc gggctctggt cgacctcggc gaggtcacag tggtggcccc cgatgccgaa
     3961 tactcgggag ccggcgcctc gctcggggcc atgcacctga tccgccccga ggtccatgac
     4021 gcgaccatcg acggcatcga ccgctcctgg tccgtcagcg gcccgccggg gctgtgcgtc
     4081 atctacagcc gcctcggttt gttcggcgac ccatttgacc tagtggtggc tggcatcaac
     4141 ccagggatga acgttggacg gtccgtgtac cactcgggca ccgtgggcgc cgctcttacc
     4201 gcacgcaatg gaggcactac aggcatcgcc gtgagccagg ccgtcaccgg ttggggcatc
     4261 gagggtcagg gggccgacga ggtgctgatc gatcagcact gggcgacagc agccacggtg
     4321 gcccgctccg tggtggaggc aatggcccag aacccaccgg atacagccga ggtgctcaac
     4381 gtgaacgtcc ccaatatccc gttgggtgaa ctgcagggtt ggcgccacac ggtgaccgga
     4441 tcggctcccc ctcgaagcct gactactgcc gacatggtcc ccaaggaggg ccatgccggg
     4501 agctaccggg tggagatgca ctggggtgaa gccggcgaac tccccgtcga caccgacggt
     4561 ggcgcagtga tggccggtct ggtcagcctc agccgcctga accgcctgca cgatgagccg
     4621 cccccggcca atgacccggc agctcgcggc ctcgatgatc tactgggtcg agcatgaccg
     4681 aacccggatc gacaccagtc tggtacgtgg cctacgggtc caatctgctg gccgcccggt
     4741 tcgacgccta ccttcagagt tgcggcgacg acacgccgtg gggatcccat cggggtgcca
     4801 ccgacccccg tccggcaacc ggtgacagac gggtcgtggt cccccatccg gtgttcttcg
     4861 gcggccactc ctcacgttgg ggcggaggct gctgcttttg tcctgacgaa cccacatcgg
     4921 ccggccgacg agacgtggtg ggtcgggcgt ggcgcatcac gtgggatcag atggccgacg
     4981 tggtcgccca ggagaacggc cggcccactg aagacgcctt cctgccctcg gaaccgcctg
     5041 catctggtga gtccgtccgg gtgctggacg ggatcatcga cctgctgatc ggcatggatc
     5101 gaatcgatga cgagccggtc tgcacgctgg gttccacggc ccctccgccc gcgggaccgc
     5161 ccagcatgtc gtatcgggct gtgctagccg ccggcatggc cgagatgggc ctccagcccg
     5221 aagaggccga acagcacctg ctggatctcg accgcagtcg ctgagcacgc tggctgacca
     5281 gacccgctga caacaccggc cgatccggat gggcaggccg aagcctccac ccggcaggcg
     5341 cctgttcaga tggtgatgag gccgccgttg ggcgagatcc actggccggt gatgaacgaa
     5401 ctctccgacg aagccaggaa cagcgccgcg gcggcaacct cctcggccgt tccctgccgt
     5461 cgcagtggtg tcatcatcac catcggggcc agcatggcct catcgacgtc ggcggtcatc
     5521 ggggtgtcga tcactccggg agcgatcgcg ttgatacgga tgcccatggc ccccagttcc
     5581 ctagacgctg cccgggtgaa ccccaggacc gctcccttgg ccgcggcgta gtgcaccgga
     5641 ccccaaccag ccagaccggc aatgctcgac aacgtgataa ccgacccgcc ctcacccatc
     5701 aacttgacgg cctcgcgggt accaaggaag gtccccccgg cgtggatggc catcatcttg
     5761 aagaacgcct cgtaacccat cagcgacatc tgggagccct gtccggccat catctcgtcg
     5821 aagccgtcgc cgggcaggcg gctcactcca gcgttgttga cctgcacgtc gagacacccc
     5881 cagttcccgt cgatctgagc aaacatcgag accatgtcgc cctcgtcgca cacatcgccc
     5941 ccgaaggccc ggtgaccatc accgtcgagc aacttgacgg tctcgtcggc cgcctcctcg
     6001 cgaagatcct gggcagcaat ggtggcgccc tcctcggcga acctcagggc catggcccgt
     6061 cccaggcccg aaccggcacc ggtgatgcag gccaccttcc ctgccagacg gcccgtttcc
     6121 cgactcatac gtgctcctga tccatattga ttcccccccg accaggctga ccacaaggtg
     6181 cccaatcggc ggcgagtgta ggacggctcg ttcccatgag gcacactgaa cgcttgaaca
     6241 tcgtcgtcat tcaccagagc cggaccggta acacccgccg ggccgccgaa ctcatcggcg
     6301 gggctgtcgc atcagccggc gccactgtcg ccgtgcgccc ggtcaccaac atcgactaca
     6361 aggaactggc cgaggccgac ctggtcttcg tcggcacatg ggtcgacggc ctgatcctgt
     6421 tcggccatcg ccccggcgac gtgggcaagg tacgccagat cccgaagttg tgggacaaac
     6481 gggtggcagc gttcatgacg catgccgtca acccgggcaa cgcagcgacc aagttgtccg
     6541 atgtgctgga gagccatggc gccaccgtgg tggccgcccg gtccttaaac cgccgccacc
     6601 tcgagaacga ggccccgctg ttcgcctccg aggtcctggc gtcgatcagc gccactacct
     6661 gaaccggaga cacctaaacc ggcttaggtc tcagccaacc tgaccccgtt gcccgagggg
     6721 ccgccaaccg gtcacccgtc cactggaccg gacagaccgg agcccatcga gggtgaacac
     6781 ggcgagtccc gtccacacga ggacgaaacc gatcaggcgt cccccgccga acggctcgtc
     6841 gtaggccacc acgccgagca ggaagtgggt ggacggcgcc aggtactgga tgacgccgat
     6901 caccgacagc ggcacccgct gcaccgcccc ggcaaagcac agcaacggca ctgcagtgaa
     6961 caggccgctg cccagcagga ctatgtactc ggtgcccgac gccgaaacca gcgcgtcctg
     7021 cccgttgatc aaccgggtcc cgaggaacac caggaccagc ggcaggatca ccatcaactc
     7081 gatggtcagc atgtccagcg gcggccggtt caccgtcttc ttcatgaggc catagatgcc
     7141 gaacgtggcc gccaggaaga gcgacaccca gggcaggcca cccatgtcga tggtcaacca
     7201 gatgacactg gccgccccca gggctacggc cgcccactgg gcccgtcgaa ggcgttcgcc
     7261 gaccacgaca acgccgagga ccacactgac cagcggggtg atgaagtagc cgaggctgcc
     7321 ctcgagcacc cggccgttgg tgaccgccca tacccatacc aaccagttcg aaccgataag
     7381 gacccccgcc agtgcctcca gggcccgcgt ccggagttca cgggccgcgg tatgcaccga
     7441 acgcagggac cggcggacga ggtgaatgac cagcaccgtg acgaaagtcc acagcacccg
     7501 atgtccgagc atgtccatgg ccgggatctc gatgccgaga cgccagaagg ccggcgacag
     7561 gccccacatg acctgggcgc acacgatcaa caccaggcct cgtcgcatcg gcccagtctc
     7621 tccagcaacc accggcccgg ccaacccagt gccggccatc acggaccgct ccgttaccgt
     7681 ttaccgaatg cggatcgggc tactgcggtg tgacgacatc ttcacggacc tgcgcccgga
     7741 gtacgggggc taccaacaac tgttcacgga cctcttcgcg accgctgacg ggaccatcga
     7801 gtccctcgag tcccccgggt ccctcgagtt cgttgacgtg ccggtgtatc tcggaacctt
     7861 cccttcggct ctcgacgatt acgacg
//
LOCUS       DASCMR010000192         2178 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000943020, whole genome shotgun sequence.
ACCESSION   DASCMR010000192 DASCMR010000000
VERSION     DASCMR010000192.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2178)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2178)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2178
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000943020"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..839)
                     /gene="argB"
                     /locus_tag="QGG16_04775"
     CDS             complement(<1..839)
                     /gene="argB"
                     /locus_tag="QGG16_04775"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003991 - acetylglutamate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HJP24621.1"
                     /translation="MSTEPIPGNPSVDSSTSDFSPERRAAVLVETLPYIQRFAGSIIV
                     VKFGGNAMVDENLAARFAEDVVLMHSVGIRPVVVHGGGPQIGALMDRLGIKSEFREGL
                     RVTDAETLDVARMVLVGKVNRDIVSSINRHGSMAVGLSGEDAGLIRASARNPELGFVG
                     DVESVNPAIIQRLLAEDLIPVVSTIGADLTGQAYNINADTVAAALAGALGAERILYLT
                     DVEGLLADVDDPSSRISRVDLTGLAALTADGMISGGMIPKVQACVDAVEAGVGSAHMV
                     DGR"
     gene            complement(836..2014)
                     /gene="argJ"
                     /locus_tag="QGG16_04780"
     CDS             complement(836..2014)
                     /gene="argJ"
                     /locus_tag="QGG16_04780"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: protein motif:HMM:TIGR00120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004358 - glutamate N-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HJP24622.1"
                     /translation="MSVTSVPGFVAAGMACGVKASGADDLAMVATTDGIPVTAAGVFT
                     SNRMTAPPVLVCRDHLSASGGRAAAIILNSGNANAATGAAGRADAEAMCVLTAEAVGC
                     APHEVLVCSTGWIGYPLPMDRIAPAIPSVAAALDPDGGPDAAVAMMTTDKVPKTTVAT
                     GPTTTGGVFTVGGVAKGAAMLEPNMATMLAVLTTDAEVDAGTATELLQSAVGVSFNCL
                     TVDGAESTNDTVLLLASGGAGPVDTETLGLALSDACRDLAIQMADDAEGSTKTVFLTV
                     TGAANDAEAAKGARDTANCQLVKCSWYGEDPYWGRIAAEMGAAGISFDPATISISYGG
                     QVVYADEAVQPVDADALTAHMACRRIDLEVDLGQGDGSAWIVTTDLSHAYIDENMRTS
                     "
BASE COUNT          372 a          739 c          711 g          356 t
ORIGIN      
        1 atccgaccgt caaccatgtg ggccgagccc acaccggctt ccacggcgtc cacgcacgcc
       61 tgcaccttgg ggatcattcc cccgctgatc atgccgtccg cggtcaaggc agccagaccg
      121 gtgaggtcga ctcgagaaat cctcgacgat gggtcgtcca catcggctag caggccttcc
      181 acgtcggtca ggtagaggat ccgttctgcg cccagcgcac cagccagggc agcggccacc
      241 gtgtcggcat tgatgttgta ggcctgcccg gtcaagtcgg cgccgatggt cgaaaccacc
      301 gggatcaggt cctcggccag tagccgttgg atgatggccg ggttgaccga ctcaacatcg
      361 ccgacaaaac ccagttccgg gttgcgggcc gatgcccgaa tgagcccggc gtcctcgccc
      421 gacaggccca cggccatcga accgtgccgg ttgatgctgg acacgatgtc ccgattgacc
      481 ttgccgacca gcaccatccg ggccacgtcg agggtctcgg catcggtgac ccgcagaccc
      541 tcccggaact cggacttgat tcccaaccga tccatgaggg ccccgatctg ggggccaccg
      601 ccgtggacga ccacgggccg gatccccacc gagtgcatga ggacgacgtc ctcggcgaac
      661 cgggccgcca ggttctcgtc gaccatggcg tttccgccga acttgaccac gatgatcgag
      721 ccggcgaacc gttggatgta gggcagcgtc tcgacgagca ccgcggcgcg acgttccggc
      781 gagaagtcgc tggtcgaact gtcgacagac ggattaccgg gaatgggttc ggtgctcatg
      841 aggtccgcat gttctcgtcg atgtaggcgt gggaaaggtc ggtggtgacg atccacgcgg
      901 agccgtcacc ctggccgagg tcaacctcga ggtcgatccg acgacaggcc atgtgggcgg
      961 tcagggcatc ggcatcgacg ggctgcacgg cctcgtcggc gtacaccacc tgtccgccgt
     1021 aggagatcga gatagtggcc ggatcgaagg agatgcccgc tgcacccatc tccgcagcga
     1081 tacgtcccca gtagggatcc tcgccgtacc aggagcactt caccaactgg cagttggcgg
     1141 tgtcccgggc ccctttggcc gcctcggcat cgttggccgc tccggtcacc gtcaggaaca
     1201 ccgtcttggt cgacccttcg gcatcgtcgg ccatctgaat cgccagatcc cggcaggcat
     1261 cggacagggc cagccccaac gtctcggtgt cgaccggtcc cgcgccaccg gacgccagca
     1321 gcagcacggt gtcgttcgtg gactcagcac cgtcgacggt cagacagtta aacgacacac
     1381 cgacggcgga ctgtaggagc tcggttgccg tacccgcatc gacctctgcg tcggtggtca
     1441 acacggccag catggtggcc atattgggct ccagcatggc ggcaccctta gctaccccac
     1501 cgaccgtgaa cacgcccccc gtagttgtcg gaccggtggc caccgtggtc ttaggcactt
     1561 tgtcggtggt catcatggcc accgcggcat ctggtccccc atcggggtcc agggcggcag
     1621 ctacagacgg gatggccggg gcgatccggt ccatgggaag cgggtaacca atccagcctg
     1681 tggagcagac aagcacctcg tgcggagcgc agcccacggc ctcggcggtg aggacgcaca
     1741 tggcttcggc gtcagcccga ccagcggccc cggtggccgc attggcgttg ccactgttca
     1801 ggattatggc ggctgccctg cctccgctgg ccgacaggtg gtcccggcag accagaacgg
     1861 gtggggccgt catccggttg gaggtgaaca ccccggctgc cgtgaccggg atgccatctg
     1921 tggtggccac catggccaga tcgtcggccc ctgaagcctt aaccccgcag gccatgccag
     1981 cggctacgaa tcccgggacg gaggtgacgc tcacgggtag accccgatgg aggtgagccc
     2041 ggtggcttcg tctaggccta gggctgcgtt ggcgcactgc acggcctggc ccgaggcgcc
     2101 cttcacgagg ttgtcgatgg cgcacagcac caccacccat ccggtccgcg ggtccacccg
     2161 ggccgtcagg tgtgcggc
//
LOCUS       DASCMR010000193         1908 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000948431, whole genome shotgun sequence.
ACCESSION   DASCMR010000193 DASCMR010000000
VERSION     DASCMR010000193.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1908)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1908)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1908
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000948431"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..237
                     /locus_tag="QGG16_04785"
     CDS             <1..237
                     /locus_tag="QGG16_04785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3151 family protein"
                     /protein_id="HJP24623.1"
                     /translation="AAYRVGYHRGLDRLRQSGWRGSGYVRWQHPTNRGFMRALAGLAR
                     VADQIGEVDEAERCALFLRQLDPDWTEAMAGETS"
     gene            240..887
                     /locus_tag="QGG16_04790"
     CDS             240..887
                     /locus_tag="QGG16_04790"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: protein motif:HMM:NF024214.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0061603 - molybdenum cofactor
                     guanylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HJP24624.1"
                     /translation="MLPLISDLPGSGSGNPFVGAVLTGGASRRMGRDKALIEVDGRPM
                     AVTVARTLLTAGASEVVAVGGDAEGLSTAGLAVVPDRYPGEGPLGGIITALGHFAALD
                     LPVVVLACDLPTPSASNVAATASAVPAAPNGAPVVVVPLEAGRRQWMHACWLPQSSVL
                     LTAAFSAGERAPWRAAEASSALGLRIVEVDGLSAAGFRDVDQPTDLASDLGAGDR"
     gene            978..1322
                     /locus_tag="QGG16_04795"
     CDS             978..1322
                     /locus_tag="QGG16_04795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015797636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HJP24625.1"
                     /translation="MSEQPVVPEVDVDELQARLADGAALLDVREPDEVDEVRVPGGVR
                     IPLGALPERIAEIPSDGTLYVICALGGRSRTAAEFLRHNGIDAVNVAGGTNAWVAADF
                     PVESGSVDGAGS"
     gene            1364..>1908
                     /locus_tag="QGG16_04800"
     CDS             1364..>1908
                     /locus_tag="QGG16_04800"
                     /EC_number="3.1.-.-"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: protein motif:HMM:NF013755.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_function: GO:0033890 - ribonuclease D activity
                     [Evidence IEA];
                     GO_process: GO:0042780 - tRNA 3'-end processing [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HJP24626.1"
                     /translation="MEFEEILDVLMGESRIAVDTEFHREKTYFPKVAMVQVAWSDGLA
                     LIDPLAVDLRPMARLLESDVLVVMHAAGQDLEVFDHTCGTVPVNLFDTQLAAGFTGLS
                     SPSLASLHERELGLRLPKGDRLTDWLARPLTKSQLDYAASDVANLLEIHDLLLARLTA
                     DGRLAWAEQECLEMLARERGRR"
BASE COUNT          287 a          572 c          689 g          360 t
ORIGIN      
        1 gctgcctacc gggtcggcta ccaccggggt ctcgaccgcc ttcgacagag cggatggcgt
       61 ggcagcgggt acgttcgctg gcagcacccg accaatcggg ggttcatgcg ggctctggct
      121 ggtctagctc gggtggccga ccagatcggc gaggtggacg aagcggagcg ttgtgccctg
      181 tttctccgcc agctggatcc agattggacg gaggcgatgg ccggggagac ctcctgacgg
      241 tgttgcccct gatcagcgac ctgcccggca gcgggtctgg gaacccattc gtcggtgcgg
      301 ttctgaccgg cggggcgagc cgccgaatgg gtcgggataa ggccctcatc gaagtcgacg
      361 gtcgtccgat ggctgtcacg gtggccagga cgctgctgac cgctggggca tcggaggtgg
      421 tggccgtggg tggcgatgcc gagggtctct cgaccgcagg cctcgccgtg gtgcctgacc
      481 gctatcccgg cgaggggcct ctcggcggca tcatcacggc actcggacat ttcgcggcgt
      541 tggacctgcc ggtggtggtg cttgcctgtg acctgccgac accttcggcg tcaaacgtgg
      601 cggccacggc gtcggcggta ccggcggctc cgaatggagc accggtggtg gtggtgcccc
      661 tcgaagcagg cagacgtcag tggatgcatg cctgctggtt gccgcagtcg agcgtcttgt
      721 tgacggcggc attctctgcg ggagagcggg cgccatggcg ggccgccgag gcctcgagcg
      781 ctttgggact ccggatcgtg gaggtcgatg gactgtcggc ggcggggttt cgtgacgttg
      841 accagcccac cgatttggct agcgacctag gggccggcga ccggtagggt cgaacggcgg
      901 tcccgacgtc tcgggacgta tcggacggat gccggtgccg cgatccgccg aagaggcggc
      961 atgagggaga gtttctgatg tctgagcagc cagtggtccc ggaagtggac gttgacgagt
     1021 tgcaggcacg tctcgccgac ggcgccgcac tcctcgacgt ccgagagccc gatgaggttg
     1081 acgaggtcag ggtgccggga ggcgtccgaa tcccgttggg ggcgttgccc gagcggattg
     1141 ccgagattcc ctcagatggc acgctctacg tcatctgcgc tctgggtggt cggagccgca
     1201 ctgcggccga gttcctccgt cacaacggga tcgatgccgt gaacgtggcc ggtggtacca
     1261 acgcctgggt cgctgccgat ttcccagtgg agtcgggctc tgtggatgga gcaggatcct
     1321 gagcgggggc ccgccggtcg actttcgact ggttaccgac cagatggagt tcgaggagat
     1381 cctggacgtc ctgatgggcg aatcgcggat cgccgtggac accgagttcc acagggagaa
     1441 gacgtatttt ccaaaggtcg ccatggtcca ggtggcgtgg tccgatggct tggccctgat
     1501 cgatccgcta gctgtcgacc tgcgtcccat ggcccgactg ttggagtctg atgttctggt
     1561 agtcatgcat gccgctggcc aggaccttga ggtctttgac cacacatgcg ggaccgtgcc
     1621 cgtcaacctc tttgacaccc agctagcggc cgggttcacc ggcctgtcct cgccgtcctt
     1681 ggcttccctg cacgaacggg aactcggtct ccgccttccc aagggggacc gcctcaccga
     1741 ctggttggct cgcccgttga ccaaatcgca actggactac gcggcgtccg acgtagcgaa
     1801 cctgctggag atacatgacc ttctccttgc ccgtctgacc gcagacggac gactggcatg
     1861 ggctgagcaa gaatgcttgg agatgctggc ccgggaacgt ggacggcg
//
LOCUS       DASCMR010000194         4520 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000953607, whole genome shotgun sequence.
ACCESSION   DASCMR010000194 DASCMR010000000
VERSION     DASCMR010000194.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4520)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4520)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4520
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000953607"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..407)
                     /locus_tag="QGG16_04805"
     CDS             complement(<1..407)
                     /locus_tag="QGG16_04805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24627.1"
                     /translation="MHEPRVSEATSSEDQSARLGGTPVDRAGIQRRTLRTLMGGIVPG
                     GAAMSSAYSSAAILGEELTSNQLLGGLAASGLTTGAAITAIPLARLMARRGRRVGIAG
                     GYAIAGIGALACLVAAQVGWYPLLVLGMLSVGMG"
     gene            468..1097
                     /locus_tag="QGG16_04810"
     CDS             468..1097
                     /locus_tag="QGG16_04810"
                     /inference="COORDINATES: protein motif:HMM:NF013122.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exonuclease"
                     /protein_id="HJP24628.1"
                     /translation="MSNSAEPPSSGSFPDERIFACFDVETTRLDPHSGHVIEVAIVRI
                     GADGTPMGEWTTLVDAGTTDVGRTDIHGIRPEWLPDAPRFPEIAGDLAAQLDGCIPVA
                     HNSPFDIGFIVEEWGRAGLGALDLDAVDTLPLARSLGLPGRLGLLAAALEVPLGDAHQ
                     ALDDTRALAGVLLALLDQGAQPPLWPIFGPPLLTPAPTGRVLHRPGAVV"
     gene            complement(1241..1741)
                     /locus_tag="QGG16_04815"
     CDS             complement(1241..1741)
                     /locus_tag="QGG16_04815"
                     /inference="COORDINATES: protein motif:HMM:NF014659.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HJP24629.1"
                     /translation="MDPNFARTVILMLEHTDEGALGVILNRPRLVGGGEAVPRWAPRL
                     AYPARLHNGGPVSTDSVIGLGRGPVGPLQGLSPLMGRIGVVDLHRDPTEVPEIDEVRL
                     FAGYAGWSANQLEAELAAGGWMVVDSHEEDVRSPDPDGLWRHVLGRQVGIASLLGDYP
                     DDVSLN"
     gene            complement(1818..2831)
                     /locus_tag="QGG16_04820"
     CDS             complement(1818..2831)
                     /locus_tag="QGG16_04820"
                     /inference="COORDINATES: protein motif:HMM:NF012798.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HJP24630.1"
                     /translation="MSAVFHEWLAWLPLYEDKPPHTVRAYSQGVRRVVSFAEIAPATF
                     RADSLDQATLTDTVRAMRAEPDVSKSTINQTLAALKSFFDYCVADRLVTVVPDIARIR
                     KVAKLDVPQVDPEYYRPNEISELYEEARSWPVSQDNGKPRGSRVRWPARDLAMCSFLA
                     VLGLRSAEILAADVSWITRERLVDADDRATWMLHVVGKARRIRRLPLSDELVEANDRW
                     QAERAERFGPSGATAPLFVTNSGDRFTYQRLRYWLKLLNREAGLRDRSLHSLRHTAGV
                     QLAADGVSMNVIQSLLGHATITTTGIYTELAGGQLVGVLEQSGANTLLAEALSPQNPL
                     DGP"
     gene            complement(3093..>4520)
                     /locus_tag="QGG16_04825"
     CDS             complement(3093..>4520)
                     /locus_tag="QGG16_04825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24631.1"
                     /translation="RAGVREHLNSVTDYSGIIGLITCDAFGDCGSQKITVIGHADSGD
                     IAGSNANVVYEYAPGGSMQVGPMLPVEEPLTASWRGVTEDSIHIATTTIDFQWLVDNG
                     FSPNGWGDPTLVWESVVADLNDRGGINGRQVVLDAVRPYSAIPGLGISADSVCLEVAG
                     DFETFAVLGGFLGPAEISNICIPGQQETILIGGRITDERLAQASAPWLESGTSTERRM
                     AVYLTLLHQNGYLDGKKVAIVGATASQGAYDIGVETLGALGIDVVLEAISEVTVGDTE
                     AEDAWWEVVSERVRTSGAEAVVFAGGDRAGFRGLFWAGVDVEYFPYNNESLTSLSNVT
                     PEMVDGAVTLTGLTEQEQLEQDEVQELCIKPFQARHPEIEVGSPDTHEDGIEKWWRSI
                     MTYCNTLRMFELIAGKAGANLTHDSFREAAASMPEFKLPLSPFSSLGPSKFDASDSFR
                     LSTFVDNGTDAGAIEPLSDIMDGTP"
BASE COUNT          825 a         1482 c         1378 g          835 t
ORIGIN      
        1 cccataccca ccgagagcat tccgagcacg agtagcgggt accacccgac ctgagcagcc
       61 accagacagg cgagtgcgcc aatgccggcg atggcgtatc cgccagcaat accgacccgt
      121 cgccctcgcc ttgccatcag gcgtgcaagt gggatggccg taatcgccgc tcctgtcgtc
      181 agaccagagg cagcgagccc tccgagtagc tgattgctgg tcagttcttc gccgaggatg
      241 gccgccgagc tatacgcgct gctcattgct gccccgccgg ggacaatgcc gcccatcaag
      301 gttcgcaagg tccgacgctg gataccggca cgatctaccg gggtgccccc cagtcgggcc
      361 gactggtcct cagaagaggt cgcctccgag accctgggct catgcatcaa cggagcgtag
      421 gacgcgggac tccggttacg tcacacccgg cggctaccgt cgcatccgtg tcgaactcag
      481 ccgagccacc gtcatccggg tcattcccag acgagcggat cttcgcctgc ttcgacgtgg
      541 agacgacccg tctagatccc cattccggac acgtcatcga agtggccata gtgcgtatcg
      601 gggccgacgg cacgcccatg ggggagtgga cgaccttggt cgatgcgggg accaccgacg
      661 tcggccgtac cgacatccat ggcatcaggc ccgaatggct acctgatgcg ccccgattcc
      721 cggagattgc cggtgacctt gccgcccagt tggacgggtg catcccggtt gcccacaact
      781 ccccgttcga cattggcttc attgtcgagg aatggggacg cgcaggccta ggcgctttgg
      841 atctggacgc tgtcgacacg cttccactag cacggtcgct ggggcttccc ggacgtctcg
      901 gcctactggc agccgccctc gaggttcctc taggtgatgc ccaccaagcg cttgacgaca
      961 cccgggctct agccggcgta ctgctggcac tcctggacca aggtgcccag ccgcccttgt
     1021 ggccgatctt cggtccgccg ttgcttacgc cggcgcccac cgggcgggtc ctgcatcgcc
     1081 ccggcgccgt cgtgtgagtc cccactccat caaccccaga gaggcggcca cctcttctca
     1141 aggagatggc gctggttgcc ttgtcagccc cccctcgcgg cgcgtacttc agctgagaac
     1201 ccctcctgag cagctcggac cacggagcaa atgaatcgtc tcagttcagg ctgacgtcgt
     1261 ccgggtagtc gccaagcaga gaggcaatcc cgacttgccg ccctaggaca tggcgccaca
     1321 acccgtcagg gtcgggggag cgaacgtcct cctcatggga atcgacgacc atccagcctc
     1381 cagcggccaa ctcggcctcc agttggttgg cgctccatcc ggcgtagccg gcgaagagcc
     1441 gcacctcgtc gatctcaggc acctcagtgg ggtcgcggtg taggtcgacg acacctatcc
     1501 gacccatcag cgggctgagc ccctgaagtg ggcctacggg ccctcgaccc aggccaatca
     1561 ccgagtcggt cgacaccggt ccgccattgt ggagcctggc cggataggcc agtcgagggg
     1621 cccagcgggg caccgcctcg ccgccgccta ccagtcgggg gcgattcagg atgacgccta
     1681 gggcaccctc gtcggtgtgc tcaagcatga ggatcaccgt acgtgcgaag ttgggatcca
     1741 tcagcccggg aacggccacc agaagccggc cttttgtgga ttccggttgg ggaggtgtgg
     1801 aactcacggc gcggtcctca cggtccgtca agcgggttct gaggtgagag cgcctcagcc
     1861 agaagggtgt tggcgcccga ctgctccagg actccaacta gctggccgcc ggcgagttcg
     1921 gtgtagatgc ccgtcgtggt tatcgtggca tggcccaaaa gactctggat tacgttcatg
     1981 gatactccgt cggccgccag ctgaacccct gccgtgtggc gaagtgagtg aagtgaccga
     2041 tcacgcaggc cggcctcacg gttcaacagt ttcagccaat accgcagacg ctggtaggtg
     2101 aaccggtcgc cactattggt gacgaatagg ggagcggtcg ctcccgatgg cccaaaacgt
     2161 tccgcccgct cggcctgcca ccggtcgttc gcttcgacca gctcgtccga caaggggagt
     2221 cgacgtattc gccgtgcctt cccaaccaca tggagcatcc aggtcgcgcg gtcgtccgcg
     2281 tcaaccaggc gctctctggt gatccagctg acgtcggccg ccagaatctc ggcggatcga
     2341 aggccgagga ccgccagaaa tgagcacatg gccagatccc tggcgggcca ccgcacgcgg
     2401 ctcccccgtg gtttcccgtt atcttgagaa accggccaac ttcgggcctc ctcgtagagt
     2461 tcgctgatct catttgggcg gtagtactcg gggtcaactt gaggaacgtc aagtttggct
     2521 accttccgaa tcctggctat gtcgggcacc acggtcacca gtcggtcagc cacgcagtaa
     2581 tcaaagaatg acttgagggc cgccaacgtc tggttgatag tcgacttgga gacgtctggt
     2641 tcggcccgca tggcccgcac ggtgtccgtg agcgtggcct gatcaaggct gtcagcccga
     2701 aacgtcgccg gggctatttc agcaaacgag acgactcgcc ggacaccctg actgtaggcc
     2761 cgcaccgtgt ggggcggttt gtcctcgtag agaggcagcc atgccagcca ttcgtgaaat
     2821 acggccgaca tgtcctctgt ttggggcagc tccctatagg gcatattgct gagtgttctc
     2881 ccgacgttcc ctaatcaagt cattgataat ctccattatc ttgacagcat ggagactggg
     2941 tatgttggat cccctattca tagttcgccc ccaacgccat aaagcatcga aggattagcg
     3001 ccagcctgat ggcttctgtg cgcggcggag ccccggatcc aggctcgtaa gccggtatcc
     3061 ggggctccgc ttcacacgat gggcggctcc ccttacggag tgccgtccat gatgtcggac
     3121 aggggttcaa tggctccggc gtctgtgccg ttatcgacaa aggttgaaag ccggaaggaa
     3181 tcagatgcat cgaacttgct cggccccagg gacgagaagg gactcaatgg gagcttgaac
     3241 tccggcatcg aggccgccgc ctcccggaag gagtcatggg tgagattcgc acctgcctta
     3301 ccggcaatca gctcgaacat tcgcaaggtg ttgcagtagg tcataatcga gcgccaccac
     3361 ttctcgatcc cgtcctcgtg cgtgtctggc gacccgactt cgatttcggg atgacgtgcc
     3421 tggaacggct tgatgcacag ctcctgaacc tcgtcctgtt ccagttgctc ctgctcggtc
     3481 aggccggtga gcgtcacagc accatccacc atctcggggg tcacgttgct gaggctggtg
     3541 agggactcgt tgttgtacgg gaaatattcc acgtcaacgc cggcccagaa cagcccccgg
     3601 aagccggcac ggtcaccgcc ggcgaatacg accgcctcag ctcccgatgt gcgaacccgt
     3661 tcggatacga cttcccacca cgcgtcctct gcctcggtgt cccctaccgt gacctcgctg
     3721 atggcctcca gcaccacgtc gatgccaagg gcgcccaggg tttccacacc aatgtcatat
     3781 gcgccctgac tcgccgtggc gccgacgatt gcgaccttct tgccgtctag gtagccgttc
     3841 tggtgcagca gcgtcaggta caccgccatg cgacgctccg tagaagtccc ggactccaac
     3901 cacggggctg aggcctgggc gagacgttca tcggttatcc ggccgccgat caggatggtt
     3961 tcctgctgtc cgggaatgca gatgttggag atttcagccg ggcccaggaa gccaccaagt
     4021 acggcgaacg tctcaaagtc gccagccacc tccagacaca cgctgtcggc gctgatgccc
     4081 aggccaggga tggcgctgta tggacgcact gcgtcgagca ccacctggcg gccgttgatg
     4141 ccgccccggt cgttcagatc ggccaccacg gactcccaca ccagtgtcgg gtcgccccag
     4201 ccattgggcg agaaaccatt gtcgaccaac cactggaagt cgatggtggt cgtagcgatg
     4261 tggatcgagt cctcagtgac gccccgccac gaagccgtca acggctcttc gacagggagc
     4321 atcgggccga cctgcatcga gccgccgggg gcgtactcgt agacgacgtt ggcgttggac
     4381 ccagcaatgt caccggagtc ggcgtggccg atcacggtga tcttctggga accacagtcg
     4441 ccaaaggcgt cacaggtgat caggccaatg atgcccgagt agtcggtaac cgagttgagg
     4501 tgctcgcgca cgcccgcccg
//
LOCUS       DASCMR010000195         3868 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000970742, whole genome shotgun sequence.
ACCESSION   DASCMR010000195 DASCMR010000000
VERSION     DASCMR010000195.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3868)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3868)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3868
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000970742"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(106..2970)
                     /locus_tag="QGG16_04830"
     CDS             complement(106..2970)
                     /locus_tag="QGG16_04830"
                     /inference="COORDINATES: protein motif:HMM:NF014647.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HJP24632.1"
                     /translation="MSKRFTSLLAVMLGFALVVSACGSDSDDAAPAATTAAPAATAAP
                     AATEAPAPPDEPVNVGLVFDIGGRGDGSFNDMAYAGLEKAANELGANISDASPNSDGS
                     NRAELLRLMAESNDLVIGVGWLFDSSMAEVSAEYPDTNFAIIDGFVDASNVASLLYAE
                     HEGSFLVGAAAGMKTSANVIGFIGGVNFPLINKFEAGFAAGVAQTNPDATVLVEYVTE
                     PPDFDGFNAPDRGREIALSMYEKGADIIYQAAGGTGFGVFEATKSHTEDSGSKVWAIG
                     VDSDQYNVVDDSVKEYLLTSMMKNMDVSVFDTIKAQGEGTFQGGAVMFNLSNDGVGYA
                     TSGGFVDDIAGDLDSLKAKVVSGAISVPEVPGERAVVLPDLGGRVVTIAVDNAYLPFA
                     YIPADTGVAMGWDYDAMDEVCARLNCVPSFQEFGWDATIIATGEGQFDMAGGGITITE
                     ERDKVVDFSISFISTDQKILVAKGNSEIGSRGDLEAANCNVGSQTGTTNYDLSVDVVG
                     EDRIVAFESFAFAVQALITGDVCAVIMDDVAGQGYQGENADSVDMLPDPLQSDPLGWA
                     FTEGSDLVAPFNEAIQSMKDDGTLAALNGKYFGTAFTVTYDDIGDGAYAEDAAALPGD
                     GVSLTMCRANWASGYIQAEIVRQVLQQAGYEISDPSVIELGPSNAYTAMAEGSCDFWA
                     NSWYPGHFSWFENELSDGSLVGDHVEAVPGLFQDSGVQGFLVTKTWAEDNNISTIDQI
                     NRDESLWSQFDSDGNGKGEILGCPESWTCDDIIENQIAWGNGTEPWDNMEETKAEYDA
                     LFAEMVNRVNAGEPGILYTWSPASYLTVLVPGDNVLWLSVEAVLDESNPLGKEGGENH
                     QQEEGFTAFGADMCTQPCQLGWSAADIQVSARTDMLDGSGGFLRKLFPLIKPSILDIS
                     FLQVDQTDGDGSQAHVAELATGWMAENAAHVDAWIAEAAG"
     gene            3766..>3868
                     /locus_tag="QGG16_04835"
     CDS             3766..>3868
                     /locus_tag="QGG16_04835"
                     /inference="COORDINATES: protein motif:HMM:NF014036.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HJP24633.1"
                     /translation="MGLPNAGKSSLYNALAGGGALAAPYAFATTDPNI"
BASE COUNT          774 a         1222 c         1155 g          717 t
ORIGIN      
        1 aaaacggtgg gaggccgggc ccttgtgggc ccggcctccg gtcaccgtgt cccgttgcct
       61 gcccctcaga gagggaccgg atccgggatc aaacgtttag gccgttcagc cagcagcctc
      121 agcgatccac gcatcaacgt gagccgcgtt ctcagccatc cagccagtcg ccagttcagc
      181 gacatgggcc tgggaaccgt caccatcggt ctggtcgacc tgcaggaacg aaatgtccag
      241 gatcgacggc ttgatcaacg ggaacagctt ccgcaagaac ccaccggaac catcgagcat
      301 gtcggtacgg gccgacacct gaatgtcagc agccgaccaa cccaactggc agggctgggt
      361 gcacatgtcg gcaccgaagg ccgtgaagcc ctcttcctgc tggtggttct cgccaccctc
      421 cttgcccaac gggttggact cgtcaagaac cgcctcaaca gacagccaca acacgttgtc
      481 accaggcacc agcaccgtca ggtacgaagc aggcgaccac gtgtacaaga tccccggctc
      541 accggcattg acgcggttca ccatctcggc gaacaaggcg tcgtactcgg ccttggtctc
      601 ctccatgttg tcccacggct cagtgccgtt accccaggca atctggttct cgatgatgtc
      661 gtcacaggtc cacgactccg ggcaaccaag gatctcgccc ttgccgttgc catcagaatc
      721 gaactgcgac cacaacgact cgtcacggtt gatctgatca atcgtcgaga tgttgttgtc
      781 ctcagcccag gtcttggtca ccaggaagcc ctggacacca gagtcctgga acagacccgg
      841 cacagcctca acgtggtcac ccacgaggct gccgtcagac aactcgtttt cgaaccacga
      901 gaagtgaccc gggtaccaag agttggccca gaagtcacac gaaccctcag ccattgccgt
      961 ataggcattg gacgggccca actcgatgac cgacggatca gagatctcgt agccagcctg
     1021 ctgaaggacc tgacgcacga tctcggcctg gatgtaacca gacgcccagt tcgcacgaca
     1081 catcgtcaac gacacaccat caccaggcag cgccgccgcg tcctcggcgt aggcgccgtc
     1141 accgatgtcg tcgtaggtga ccgtgaatgc ggtaccgaag tacttgccgt tcagtgcagc
     1201 gagagtgccg tcgtccttca tggactggat ggcctcgttg aacggagcca cgaggtcact
     1261 gccttcagtg aaggcccagc ccagcggatc cgactgcagg ggatcgggga gcatgtccac
     1321 agaatctgcg ttctcaccct ggtagccctg accggccacg tcgtccatga tcacggcgca
     1381 cacgtcaccg gtgatcaggg cctgcacggc aaaggcgaat gactcgaatg ccacgatccg
     1441 gtcctcgccg actacgtcca ctgaaaggtc gtagttggtg gttccggtct gcgaaccgac
     1501 gttgcagttc gcagcctcga ggtcgccacg agagccgatc tccgagttgc ccttggccac
     1561 aaggatcttc tggtcagtgc tgatgaagct gatcgagaag tccacgacct tgtcacgctc
     1621 ttcggtgatc gtgataccgc caccggccat gtcgaactgg ccctcgcctg tggcgatgat
     1681 cgtggcgtcc cagccaaact cctggaagct cggaacgcag ttcagtcgtg cacagacctc
     1741 gtccatggcg tcgtagtccc aacccatagc cacaccggtg tcagccggga tgtaggcgaa
     1801 cggcaggtag gcgttgtcca ccgcgatggt gacgacgcgg ccgcccaggt cgggcagaac
     1861 cactgcccgc tcaccgggca cctcgggcac gctgatggcg ccgctaacga cctttgcctt
     1921 gagggagtca agatccccgg caatgtcgtc tacgaaacca ccacttgtgg cgtaaccaac
     1981 tccgtcgttg gagaggttga acatgaccgc tccgccctgg aatgtgcctt caccctgagc
     2041 cttaatggtg tcgaacacgg atacgtccat gttcttcatc atcgaggtca ggaggtattc
     2101 cttgaccgag tcatcgacca cgttgtactg gtcagagtcc acgccaatgg cccagacctt
     2161 cgaacctgag tcctcggtat gggactttgt ggcctcgaag acaccgaatc cggttccacc
     2221 agcggcctgg tagatgatgt cggcaccctt ttcgtacatc gacagtgcga tctcgcggcc
     2281 ccggtcagga gcgttgaatc cgtcgaagtc cggtggttcg gtgacgtact cgaccaggac
     2341 tgttgcgtcc gggttggtct gcgcgacacc ggcggcgaaa ccagcctcaa acttgttgat
     2401 cagtgggaag ttcacgccac cgatgaatcc aatgacgttg gcgctggtct tcatacccgc
     2461 tgccgcaccc acgaggaacg aaccttcgtg ttcggcatag agcagagagg ccacgttcga
     2521 cgcatccacg aagccatcga tgatggcgaa gttcgtgtcc gggtattcgg ccgacacctc
     2581 ggccatcgag gagtcgaaca gccagccaac accaatcacc agatcgttgg attcagccat
     2641 caggcggagt agttctgccc tattcgagcc atcagagttg ggcgaggcgt cggagatgtt
     2701 ggctccgagc tcgttggccg ccttctctag acctgcatag gccatgtcgt tgaatgaccc
     2761 atctccgcgg ccaccgatat cgaagaccag tcccacattg accggttcgt ccggcggtgc
     2821 cggagcctcg gtggctgccg gtgcagcagt cgcagcgggt gccgcggtgg tcgccgctgg
     2881 tgcggcatcg tcgctgtcgc taccgcacgc cgagacaact agggcaaacc ccagcatcac
     2941 agcgagcagg ctggtaaatc gcttactcat gaacccctcc ggtcccttgt cgcatcgttg
     3001 cgctgcgcga cgacccatgg tcacccgcag gacagatgac ggtactccct cctgtgaccg
     3061 aacgcacatg aaactgatcg ggtcggtgag gtacgggcga ttccggtcag cgggaatggt
     3121 ccaggaggcc gagttcagga ccgagcaccg gcgaccgtca cggtggtgac gatgccgctg
     3181 ctggcctgct gggtcagggc ggcggagacc ggtaccgcaa cgacatcgtc taggtgggcg
     3241 gcgatttcgg acaccagacg ttcggcgaag atgctgcgac tgtcaaaggt ccgcaggtaa
     3301 agcttgagcg acttgtactc gatgtcgatc gtgtagaagt ccggccaatt ggtgaccggt
     3361 cacgttgaag cgagcttcga gaagacgaag tgcaccagat cgagcgagcc cctggctcta
     3421 tcccttggcg gggaaggcct cgaactgact gctgggaaag gcgtcgggac ggcagagaac
     3481 cggctcgtca agggacgcca tgacggggtt cgtcagctgt tgcgacccag attgggtttg
     3541 cgaccgtggt tggctttctt acggcggacg ttggccttcg ccctgctggt gcgctttgac
     3601 atgtcggtca gggtagcggc ggccatcacc ggatccgcag ggctgatcca gtcagaccgc
     3661 cgggcctcgg tcacacagcc gtcggccgtc cggccgtcgg acctagcctg atccgaccag
     3721 aggacacgtc ggagccggag gccccaagtg gaacggttcg gattcgtggg gctacccaac
     3781 gcgggaaagt catcgctgta caacgcactg gctggaggcg gcgccctggc cgccccttac
     3841 gcattcgcca ccactgaccc gaatatcg
//
LOCUS       DASCMR010000196         1508 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000983665, whole genome shotgun sequence.
ACCESSION   DASCMR010000196 DASCMR010000000
VERSION     DASCMR010000196.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1508)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1508)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1508
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000983665"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            126..>1508
                     /locus_tag="QGG16_04840"
     CDS             126..>1508
                     /locus_tag="QGG16_04840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24634.1"
                     /translation="MAADETIALPTDLPDAIRSAGLTDPGSEVAVLLTRQRSDPRDPI
                     RTEPEQSMDRTFVVPWDRPFLLHGEARLSAHAPDDLFNAVLGDPSSGTASATGSLAGD
                     LTSRARAAFDDDPLTAWQTPIGPQEGHALTLALANPQTFVDLVLSYRADGLHSAPRTV
                     TVVGDDGPVGTVDLPGTLLNRTEGVIRVPLDLPAFTSRTLTIRIDEVVERRTMNWYSG
                     LPDVLPVGIVEVNDGVTAAGAPDLLDTGCRSDLVTLDGRSVSVRISGTTVDARTRQPL
                     IVEACDSPLILAAGSHRLRISPGKGSGFDLDRLVLISPSVHDPASDRQTGPELQVTAE
                     SRTSMDIVARGEIRSFWLVLGQSYSDGWRLTLDGATVDGADSGIAPVLVDGFANGWLV
                     TQAQGAGEPIGLHLRWTPQRLVRLSLGLSLFAAAGCLLVAWRGRRDIGVRSFEPSRLL
                     PAHRPRAKPVG"
BASE COUNT          242 a          489 c          490 g          287 t
ORIGIN      
        1 tggagatccg ggccaccgat gtcggccaac tcgaccatta cgccggtgtg accggcgtcg
       61 gatttgccga ggtgcgggtc agtacaccag gaagcgaatg aggtgattcc gctgggttcg
      121 attacgtggc ggccgacgag accattgcac tgcctactga cctcccagat gccatccgtt
      181 ccgctggcct gaccgatccc ggatccgagg ttgccgtgct gttgaccagg cagcgctctg
      241 atcctcgaga ccccatccgc accgaaccgg agcagtccat ggatcgcacc ttcgtggtgc
      301 cgtgggaccg tccgttcctt ctgcacggcg aggcccgcct ctcggcacat gcgcccgacg
      361 acctgttcaa tgcggtcctc ggtgatccca gctctggtac ggcgtctgcc acggggagtc
      421 ttgccggcga tctaacgtcg agggcccgag cagcgttcga cgatgacccc ttgacggcat
      481 ggcagacgcc cattggcccc caggagggcc atgcgttgac gttggccctg gccaacccgc
      541 agacgtttgt tgacctggtc ctgtcctatc gagccgacgg cctccactcg gcaccccgca
      601 cggtgaccgt ggtgggcgac gacggcccgg tagggaccgt ggatctccca ggaacactcc
      661 tcaacaggac agaaggcgtc atccgggtgc cactggatct cccagctttc accagcagga
      721 ccctcaccat ccgtatcgac gaggtggtcg agcgacgaac aatgaactgg tactcgggcc
      781 ttcccgacgt gcttccagtt gggatcgtgg aggtgaacga cggggtgacc gctgctggcg
      841 caccagatct gctggacacc ggttgtcgga gcgacctggt aactctcgac ggtcggtcgg
      901 tctcggtgcg gatcagtgga accaccgttg atgcacggac ccgtcagcct ttgatcgtag
      961 aggcctgcga tagtcccctg attctcgccg ccggatcgca ccggctccga atcagccccg
     1021 ggaaagggtc gggcttcgac ctggaccgtc tagtcctcat ttcaccgtca gtccacgatc
     1081 cggcgtccga taggcagacg ggtccggagt tgcaggtcac cgcggagagc cgcacgtcga
     1141 tggacatcgt ggccagaggc gagatccgtt cgttctggct ggtgctgggg cagagttata
     1201 gcgacggatg gcgtctcacc ctggatgggg ccacggtgga cggtgccgat tccggcatcg
     1261 cacccgttct cgtcgatggg ttcgccaacg ggtggctggt tacgcaggcc cagggtgccg
     1321 gcgaaccgat tggcctacat ctccggtgga ctccccagcg actagtccgg ctgagcctcg
     1381 gtctttcgct gttcgcggcg gccgggtgcc ttctggtggc gtggcgcggg cggcgcgaca
     1441 taggtgtccg ctctttcgag ccatcccgac tactaccggc tcaccgtccg cgagccaagc
     1501 cggttggg
//
LOCUS       DASCMR010000197         1727 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000983948, whole genome shotgun sequence.
ACCESSION   DASCMR010000197 DASCMR010000000
VERSION     DASCMR010000197.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1727)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1727)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1727
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000983948"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..956
                     /locus_tag="QGG16_04845"
     CDS             <1..956
                     /locus_tag="QGG16_04845"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJP24635.1"
                     /translation="QPTDVGSIAFPYAHIGGPDYLVCLLASGFPAVLVEKFDLGAVVD
                     AYRRHRVTMAGGSTVFYTMFLGVQRQQPDEPIIPTLRLLSGGGAPKPPEIFFEVQAEM
                     GIPVAHGYGMTESPMICQGSPADSDDQLAHTEGHPVHAAQVAICRPDGSECDRGEEGE
                     VRISGPQLFKGYRDPSLNADAFDDLGRFRSGDLAVMRDDGHVTLTGRLKDVIIRKGEN
                     IAAKEIEDVLYTHPAVGAVAVIGLPDTERGERVCAVVETAEDSEPLTLDQMAEACADA
                     GLMRQKVPEQLVVYDGPLPRNATMKILKYELKEAMAEIPWP"
     gene            complement(1008..>1727)
                     /locus_tag="QGG16_04850"
     CDS             complement(1008..>1727)
                     /locus_tag="QGG16_04850"
                     /inference="COORDINATES: protein motif:HMM:NF005126.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crotonase/enoyl-CoA hydratase family protein"
                     /protein_id="HJP24636.1"
                     /translation="DRPAKMNGYTPQMARQLVDAFERLDTDDDLWCGVLFGHGAHFTA
                     GLDLPKFHGGMKEGRRSTSGRIDPMSLGRRCCKPIVTAVQGVTFTLGIELMLAGDIVV
                     AADDCRFSQLEPMRGIHAAGGATMRFVDRGGWGNAMYHLLTSDEFDAAEAYRIGLVQE
                     VVATGTQLDRAIEIAEVICTNAPLAIQATKASSARYVREGEEACIEALGVTQSGLAAT
                     EDAAEGVAAFRDRRKGRFTGR"
BASE COUNT          305 a          578 c          549 g          295 t
ORIGIN      
        1 tgcagcccac cgacgtcggg tcgattgcct tcccgtacgc ccacattggt ggccccgact
       61 acctggtctg tctcctggcc agcggcttcc cggccgtgct tgtcgagaag ttcgacctag
      121 gtgcggtggt agacgcctac cgccgccaca gagtgacgat ggctggtggc agcactgtct
      181 tctacacgat gttcctcggg gtccagcgcc agcagcccga cgagccgatc atcccgacac
      241 ttcgcctcct ctcgggaggc ggagctccca aacctcccga gattttcttc gaagtgcagg
      301 ccgagatggg catcccggtg gcccacggct acggcatgac cgaaagcccg atgatctgcc
      361 aggggtcgcc cgctgattct gacgaccaac tcgcccacac cgaaggtcat ccagtgcatg
      421 ccgcgcaagt agccatctgt cgacccgatg gaagcgaatg cgaccgtgga gaggagggcg
      481 aggtccggat ctcgggccca cagctcttca agggctaccg ggacccctct ctgaacgcgg
      541 atgccttcga cgatctggga cggttccgca gcggcgacct agccgtcatg cgtgatgacg
      601 gccacgtcac cctcaccggt cgattgaagg acgtgatcat ccgcaagggc gagaacatcg
      661 ccgccaagga gatcgaggac gtcctctaca cccacccggc cgtcggtgcc gtggccgtca
      721 tcggccttcc cgacactgag cgtggtgaac gggtctgtgc ggttgtcgag acagcggagg
      781 actctgaacc actgaccctc gaccaaatgg ccgaggcgtg cgccgacgcc ggcctcatgc
      841 gccagaaggt gcctgaacaa ctggtggtgt acgacggccc gctgccccgc aacgccacca
      901 tgaagatcct gaagtacgaa ctaaaggaag ccatggctga aattccttgg ccgtaggggc
      961 cccagcccgg gaggggcttc tggtcccagg cgggtgggcc gcacgattta ccggccggtg
     1021 aaccggccct tacgacgatc ccggaaggcc gccacaccct cggcggcatc ctcggtggct
     1081 gccaacccgg actgggtgac ccccagtgcc tcgatgcacg cctcttcgcc ctcgcggacg
     1141 tagcgggcgg acgaggcctt ggtggcctgg atggccaacg gggcgttagt gcagatcacc
     1201 tcggcgatct cgatggcccg gtccaactgg gtgccggtcg ctacgacctc ctggacgaga
     1261 ccgatccggt aggcctcggc cgcgtcgaac tcgtcagagg tgagtaggtg gtacatggcg
     1321 ttaccccatc cgcctcggtc gacgaagcgc atggtggcgc cgcccgcagc atggatgccc
     1381 cgcatcggtt cgagttggga gaatcggcag tcatcggcgg ccacaacgat gtcgccggcc
     1441 agcatcagtt cgatccccag ggtgaacgtc acgccctgca ccgcggtgac gatcggtttg
     1501 cagcatcgac gcccgagcga catcgggtca atgcggccac tagtcgatcg tcgcccttcc
     1561 ttcatgccgc cgtggaactt cgggaggtcc agccctgccg tgaagtgggc gccgtggccg
     1621 aacagcaccc cgcaccacag gtcgtcgtca gtgtcgagac gctcgaaggc gtcgaccaac
     1681 tgacgggcca tctgtggcgt atagccgttc atcttggctg gtcggtc
//
LOCUS       DASCMR010000198         2341 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000988200, whole genome shotgun sequence.
ACCESSION   DASCMR010000198 DASCMR010000000
VERSION     DASCMR010000198.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2341)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2341)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2341
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000988200"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..381)
                     /locus_tag="QGG16_04855"
     CDS             complement(<1..381)
                     /locus_tag="QGG16_04855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP24637.1"
                     /translation="MLRLTFRNITRRKLRFALTTLAVVLGVAFLSTSFFLTDRLRDSF
                     DELATDISGDIDLVVRTSIDEGGDRINRLPFPEEVLDLLTDVPGVRNVWPTVQAWNVV
                     PLYIDEDGDLKAIGTSGGAPQFGFN"
     gene            complement(386..1150)
                     /locus_tag="QGG16_04860"
     CDS             complement(386..1150)
                     /locus_tag="QGG16_04860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJP24638.1"
                     /translation="MTSTKTGESTTPMETAAARMVSGSKVYGTGDTEVRALDGVDVEF
                     ERGRFTAIMGPSGSGKSTLMHCSAGLDDLTSGTVHIGDVELGDLSERDLTLLRRDKVG
                     FVFQAFNLIPTLTAEENLTLPLDLAGRKPDASWMVDIIETVGLQDRLRHRPDELSGGQ
                     QQRVAVARALVSRPEIVFADEPTGNLDSVTGGEVLKFLRGAVDDLGQTLVVVTHDAGA
                     AAMADRVLFLADGQIVDEMSNPDADRILDRIKAIGG"
     gene            1291..1785
                     /locus_tag="QGG16_04865"
     CDS             1291..1785
                     /locus_tag="QGG16_04865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24639.1"
                     /translation="MLIRPATSDDLDRMLELNNAAVPAVNELTPDEMAWFFAVARCCV
                     VAEVPSSTVSGPAALLVGLDGPGIGYDSRNYRWFSERFDRFLYVDRVVVDPSAYRAGV
                     GRAFYEAFMATSDGHTHLCAEGNTVPRNERSLAFHDAMGFSDVGEQSDEGTGKTVRMY
                     ARKL"
BASE COUNT          425 a          720 c          771 g          425 t
ORIGIN      
        1 gttgaagccg aactgtggtg ccccaccgct ggtgccgatc gctttgagat cgccgtcctc
       61 gtcgatgtag aggggaacca cgttccacgc ctggaccgtc ggccacacat ttcggacacc
      121 ggggacatca gtcaggaggt cgagaacctc ttccggaaag gggagacggt tgatccggtc
      181 gcccccttcg tcgatcgacg ttctgacgac gaggtctata tccccactga tgtcggtagc
      241 gagctcatcg aagctgtcgc ggagtcggtc cgtcaggaag aacgacgtcg acagaaatgc
      301 gacgcccagc acaaccgcca gagtcgtgag ggcaaaccgc agcttgcggc gcgtgatgtt
      361 ccggaaggtg agtcggagca cccggtcagc cgccgatggc cttgatgcga tcgagaatac
      421 ggtcggcgtc cgggtttgac atctcgtcga cgatctgtcc gtcagcaagg aacagcacgc
      481 ggtcggccat cgcagcggca ccggcatcgt gggtgaccac tacgagtgtt tgccccagat
      541 cgtcgaccgc acccctcagg aacttgagga cttcgcctcc agttaccgag tcgaggttgc
      601 cggtcggctc gtcagcaaag acgatctcgg gtctactgac cagggcccgt gccacagcga
      661 cccgttgctg ttgaccgccg gacagctcat ctggccggtg tcggaggcgg tcctgaagcc
      721 cgaccgtctc gatgatgtcg accatccagg aggcatcggg cttccgtccc gccaggtcca
      781 acggcagtgt gaggttctcc tcagccgtca gggtcgggat gaggttgaac gcctggaaga
      841 cgaacccgac cttgtcgcgt cgcaagagag tgaggtctcg ctcggagagg tcaccgagtt
      901 caacgtcgcc gatgtggacg gttcccgagg tcaggtcgtc gagccccgcc gagcagtgca
      961 tgagtgtcga cttgcccgac cccgatggac ccatgatggc ggtgaaccgg ccccgttcga
     1021 attcgacgtc cacgccatcg agggcacgaa cctcggtgtc tccggttccg tagacctttg
     1081 agccgctgac catgcgggcg gcagcagttt ccatgggcgt ggtgctttca ccggttttcg
     1141 tagaggtcat ggagtcgaat cgtaggagtc gaatagtcaa aagaagcagc caaagcgtta
     1201 ggggcgggtt aagaacaaaa accttggatc tggggtcatc ccggtgtcgc cgggtggcac
     1261 cccgtcgtgg atccgtggtg ggatttacga gtgttgattc gacccgctac ctccgacgat
     1321 ctggaccgca tgctcgagtt gaacaacgcc gcggttccgg cggtcaatga actgaccccg
     1381 gatgagatgg cctggttctt cgccgtggct cggtgctgcg tggtggccga ggtgcccagt
     1441 tccacggtct cgggaccagc ggccctgctg gtaggcctcg atggccccgg catcggctac
     1501 gacagccgca actacaggtg gttcagcgag cgcttcgaca ggtttctgta tgtggacagg
     1561 gtggtggtcg atccatcggc ttaccgcgcc ggcgtaggtc gtgccttcta cgaggcgttc
     1621 atggctacct cggacgggca tacccacctg tgtgccgagg gcaacacggt gccccgcaac
     1681 gaacggtcct tggccttcca cgacgccatg gggttttcgg acgtcgggga acagtctgat
     1741 gagggaaccg ggaagaccgt tcggatgtac gcccggaaac tttgaccggc gcgtgcccgg
     1801 ggcaggtcta ctcgctgacg acggtggtgc cggctgggcg tctaccagcc gatccgcagg
     1861 accagcacgg ctcgatcggg tctcctcgcc acgccacctc gcacgacggg cataccagac
     1921 caacccagtt ggccggttca gacggagtcc ccctgcggaa ggcagggcgc cgatggaggg
     1981 gtccgttccg tagcggatgg tccaacgagg ggtccaggac acgggggtct ggagtcctcg
     2041 gtgtcgaccg gggtgccatg cgcggcaccg tagcgaaggc ccgcgcgtca ctgggtgatg
     2101 ccgtggccgg tcggaggtaa ggctgggtcg ccgtagcctg caccccggcc cagtgccgat
     2161 gaagagcaac ccgtaggccg aggaggcccc atgtccgatc tgattcccga agtcgacggt
     2221 tccagcgaac gacggaccac cttcccggcc gccccgccga tggtcatcga cccggcaaag
     2281 acatacaccg ccgagatggt cacctccatg ggttcgatga ccatccacct agatcccatc
     2341 g
//
LOCUS       DASCMR010000199         3421 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000998171, whole genome shotgun sequence.
ACCESSION   DASCMR010000199 DASCMR010000000
VERSION     DASCMR010000199.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3421)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3421)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3421
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000998171"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            229..1467
                     /locus_tag="QGG16_04870"
     CDS             229..1467
                     /locus_tag="QGG16_04870"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJP24640.1"
                     /translation="MHDVSDPSRRRHPYRWVLFSGVCGVYFAFGVVAMSIPPLVGEVR
                     EDLDLSRGAMGLALGAWQLVYIVSAPVGGRLLDRLGVHRGVLLGALVVAISGVARAAA
                     GGLSTFLLAIALFGIGGPLISAGAPKAVGLWFGEERERRLAIGTYSTMPAIGGMATLV
                     LSNSVFMPLTGSWRTTVLIETGVVVVAAAAWLVVSSRAPEAPIRVAPADMANAAGRRI
                     LLADPEVRTVLVLGLGVFFVGHSLSGWMPEALREHSGFSAMAAANWAALGGLVGVLAS
                     ILVPRRTERGRMPNTMAAMFLLIAVALVALLLLPTSLDPLPVAVAGLRSALVPLILIG
                     LMESESVTPANTGVAYGLWFAVAEIGGFAGPFVLGAVADSSAGFAGAFGLVAVVCVAL
                     LVPTARLRRFSGRPVGSDLT"
     gene            1467..>3421
                     /locus_tag="QGG16_04875"
     CDS             1467..>3421
                     /locus_tag="QGG16_04875"
                     /EC_number="3.1.6.-"
                     /inference="COORDINATES: protein motif:HMM:NF013080.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arylsulfatase"
                     /protein_id="HJP24641.1"
                     /translation="MPRQDDSGRDMTSDHPVGPRAYEKFSYDGFDGEVGRIMSTSTPA
                     WTRPPTAPDGAPNVLVVLVDDLGFSDVGCFGSEIDTPHVDRLAAEGLRYVNFHVNPMC
                     SPTRASLLTGLNHHLAGVGTVCHMEPGFPGYAASIRSDAVTMGEVLRDAGWSSLMVGK
                     WHLCPDSQLTEAGPKDGWPLQTGFDRFYGILDGFTNFHQPHRLYEDNHALDVDDFPDD
                     YYFTDDLTDRALSMVGEIRDGHPTKPWFLYFSHGAVHAPLQARPGDLEKYRGRYEAGW
                     DEVRRLRFDRQKAMGIFDDDVVLPPRNTEENYAVRAWDDLTVAEKEVFARYQEVFAAM
                     VDNVDQNLGRLRDGLEAMGEWDNTVVVFTSDNGGSREGLDNGTSAYFRTLLGQTRPNP
                     LDSMELDHSRMDLLGGPQALAHYPSGWAMVSGTPFRLYKINTHQGGHQVPFIISKGAG
                     LAGAGGIRRQYQHVTDLLPTVLDLAGVAMPTTKNGAQVPPAAGCSFAGSLDDPGVDST
                     HPEQYYEQMGHRGFYRDGWSAVTCRQARTPFSTEQWELHHLAEDPTESRNLAYEHPEK
                     LAELVAAWEDAAWANQVFPLDEGNNVKNLMRPPWNADTVVETTFRPGRPTTERYRSLA
                     LINFRSFEVEVSFDFATGDRGTLVAHG"
BASE COUNT          533 a         1115 c         1158 g          615 t
ORIGIN      
        1 ctgaggtggc cgatccggcg gcgttgaaca gtccgcgaaa tgccaccacg aggattggtc
       61 ggtccaactg gtcaagcaac tggtcgtcag ccgtccaacg cagttcgatc gggtcggtcg
      121 tcaccgggac aggttcgcag atgacggcct ctgatcggtg accgggtgtc cgcgctgggg
      181 tcggagcccg gtcggagccc gggaggtacc acatgagacc atcagccggt gcacgatgtc
      241 tccgatcctt cccggcgtcg acatccctac cggtgggtgc tgttcagcgg agtgtgcggc
      301 gtctacttcg ccttcggggt ggtggccatg tcgattccgc cgttggtcgg cgaggtgcga
      361 gaagatctcg acctgagccg tggcgccatg ggtctggccc taggcgcctg gcagctcgtc
      421 tacatcgtga gtgcgccagt cggcgggcgt cttctggatc gactgggcgt ccaccggggg
      481 gtattgctgg gggccttggt ggtggcgatc agcggtgtgg cccgggcggc ggctggcggc
      541 ctgagcacgt tcctactggc cattgcccta ttcggcattg gtggcccact catttcagcc
      601 ggtgcaccca aggcggtcgg tttgtggttc ggagaggagc gagaacgccg gttggccatc
      661 ggcacctata gcacgatgcc ggccattggt ggcatggcca cgctggtact ttccaactcg
      721 gtgttcatgc cgctcactgg gtcgtggcgc accacggtgc tgatcgagac gggtgtcgtc
      781 gtggtggccg ccgcagcgtg gttggtcgtg tccagtcggg cgcccgaggc gccgatccgg
      841 gtggccccgg ccgatatggc caatgcggcg ggtcgacgga tcttgctggc cgatcccgaa
      901 gtccgcactg tgctggttct cggcctcggt gtgttcttcg tgggccacag cctcagtggg
      961 tggatgcccg aggcgctccg ggagcacagc gggttctcgg ccatggcggc cgccaactgg
     1021 gcggccctcg gcggtctggt aggcgtgctg gcctcgatcc tcgtgccgag gcgcaccgag
     1081 cggggccgga tgccgaacac catggcggcc atgttcctcc tgatcgccgt cgccctcgtc
     1141 gccctgctgc tcctacccac gtctctggat ccgctgccgg tagccgtcgc ggggcttcgg
     1201 tcggcgctgg ttccgctcat tctgatcgga ctcatggagt cggagtcggt aactccggcc
     1261 aacaccgggg tggcctacgg gctgtggttc gcggtggctg agatcggtgg gttcgccgga
     1321 ccgttcgtgc tgggtgcggt ggccgactcg tcagccgggt tcgccggggc gttcggactg
     1381 gtggccgtgg tctgtgtggc cctgctggtc ccgaccgccc ggctccgacg gttcagcggt
     1441 cggccggtag gttcggacct gacctgatgc cccgtcagga cgattccggg agggacatga
     1501 ctagcgacca tccggtgggt ccgagggcct acgagaagtt ttcctacgac ggattcgatg
     1561 gagaggtggg ccgcatcatg tccacatcga ccccggcgtg gacccgaccg cccaccgccc
     1621 ctgacggtgc ccccaacgtc ctcgtcgtcc tggtcgacga cctgggtttc agcgacgtcg
     1681 gctgcttcgg ttcggaaatc gacacgccac acgtcgaccg tctggccgcc gagggccttc
     1741 ggtacgtgaa cttccacgtc aacccgatgt gctcgccgac ccgggcttcg ttgctgaccg
     1801 gattgaacca tcatctggcc ggggtaggca cggtctgcca catggagccc ggcttcccgg
     1861 gttacgcggc ttccatccgc agcgacgcgg tgaccatggg agaggtgctg cgcgacgcag
     1921 gttggtccag cctcatggtc ggcaagtggc acctctgccc agatagccaa ctcaccgagg
     1981 ctggcccgaa ggacgggtgg ccgctccaga ccgggttcga ccgcttctac ggaatccttg
     2041 acgggttcac gaacttccat cagccgcatc gcctctacga agacaaccac gcgctggacg
     2101 tcgacgactt ccccgacgac tactacttca ccgacgacct caccgaccgg gcgctgagca
     2161 tggtcggcga gatccgcgac gggcacccca cgaagccgtg gttcctctac ttctcccacg
     2221 gcgccgttca cgccccactg caggcccgac ccggtgacct agagaagtac cggggtaggt
     2281 acgaggccgg ctgggacgag gtgcgacgac tccgcttcga ccggcaaaaa gccatgggca
     2341 tcttcgatga cgacgtcgtg ctgcctcccc gaaacaccga ggagaactac gcggtccggg
     2401 cgtgggacga cctgacggtc gccgaaaagg aggtcttcgc ccggtaccag gaggtgttcg
     2461 ccgccatggt cgacaacgtc gatcagaacc tcgggcgtct ccgtgacgga ctggaagcca
     2521 tgggggagtg ggacaacacc gtggtggtgt tcacgtcgga caacggcggc agtcgagagg
     2581 gtctagacaa cggcacgtcc gcctacttcc ggaccctcct cggccagacc cgacccaacc
     2641 ccctggattc gatggaactg gaccattcac gcatggacct gctaggtggc ccacaggccc
     2701 tggctcacta cccgtcgggt tgggccatgg tgtcgggcac cccgtttcgg ctctacaaga
     2761 tcaacaccca ccaaggtggc catcaggtgc cgttcatcat ctcgaaggga gcgggcctag
     2821 ctggcgccgg tgggatccgt cgccaatacc agcacgtcac cgacctgctg cccaccgtgc
     2881 tggacctggc cggggtggcc atgcccacca cgaagaacgg ggcccaggtc ccgccggccg
     2941 ccggttgcag cttcgccgga tccctggatg accctggggt cgacagcacc caccccgagc
     3001 agtactacga gcagatgggg caccggggtt tctaccggga cggctggtcg gcggtgacgt
     3061 gccgtcaggc ccgaaccccg ttctcgaccg aacagtggga gctccaccac ttggccgagg
     3121 atcccaccga gtcacggaat ctggcctacg agcatcccga gaagctggcc gagctagtgg
     3181 ccgcctggga ggacgcggca tgggccaacc aggtgtttcc tctcgacgag ggaaacaacg
     3241 tcaagaacct gatgcggccc ccatggaacg ccgacaccgt ggtcgagacg accttccggc
     3301 cgggcagacc gacgacggag cggtaccggt ccctcgccct catcaacttc cgatccttcg
     3361 aggtcgaagt gtcgtttgac tttgcgacgg gcgaccgggg cacgttggtg gcccacggtg
     3421 a
//
LOCUS       DASCMR010000200         3765 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000999320, whole genome shotgun sequence.
ACCESSION   DASCMR010000200 DASCMR010000000
VERSION     DASCMR010000200.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3765)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3765)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3765
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000999320"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..603)
                     /locus_tag="QGG16_04880"
     CDS             complement(<1..603)
                     /locus_tag="QGG16_04880"
                     /inference="COORDINATES: protein motif:HMM:NF024859.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HJP24642.1"
                     /translation="MTLRLRQVALVAHDLDLVERDLIAHLGLEPCVHDLGVSQFGLRN
                     VLFPVGECLLEVVSPTATGTTAGRQLERRDGDGGYMVLIQTDDLAGDRRRLADLGIRI
                     VLDAKMPGIEGVHIHPKDVGGAILSIDETEDWADWPWAGPAWSDHVRTGVVSDLVAVE
                     VQADDPAAMAERWADALGVSRSGNAVSLDEGEISFVEPADG"
     gene            666..1538
                     /locus_tag="QGG16_04885"
     CDS             666..1538
                     /locus_tag="QGG16_04885"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012472.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HJP24643.1"
                     /translation="MQTRRLGRTDHQSSIAILGGAAFAADTSDESAVFLHEAIDAGIN
                     HLDIAPGYGLAERAVGPHIPALRDRLFVAGKTAETERDWARTRLRRTLDRLQVDYLDL
                     YQAHGVTSLEVLDQRAEAFEVILEARDQGLTRFVGVTGHDLTAPRAHLEAVRRYDLDT
                     VMFPVYPRVMADADYRADVEALLAECINRDVGVMAIKAVAWRPWGDRTPDLRTWYEPQ
                     RTPKGIEDGVRFALSTPSVDAFCTPSDKTTARLAIAAAERLEPLDATEWTALLSTDEA
                     FIFPLVDHAVSAWG"
     gene            1622..1975
                     /locus_tag="QGG16_04890"
     CDS             1622..1975
                     /locus_tag="QGG16_04890"
                     /inference="COORDINATES: protein motif:HMM:NF018008.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HJP24644.1"
                     /translation="MAAMQFKGSIKGRELPAMDEFDANAFLDDFAVSEDPDKPITAGC
                     YRLEAGQSMTYTYTYHEMKLIVDGEITIADDTGQSVTATKGDLFYFPPGSTITFSTED
                     YGVGYFVGQRGVGEA"
     gene            2107..2307
                     /locus_tag="QGG16_04895"
     CDS             2107..2307
                     /locus_tag="QGG16_04895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012226668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HJP24645.1"
                     /translation="MPNGTVKFFNAEKGYGFLSVSGEEDVFVHYSNIEGEGYRSLDEG
                     QAVEFEVGPGRKGPEALNVRKV"
     gene            complement(2438..3406)
                     /locus_tag="QGG16_04900"
     CDS             complement(2438..3406)
                     /locus_tag="QGG16_04900"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJP24646.1"
                     /translation="MAPTLNRFQGSVAVLLCGVAFSFGPLTLRALHEADEWQYLTYRS
                     FFAAAVSLVIIVAAGRSPVRAVMDAGVRQVLAGFLFAAMFTLFVVALSRVSAAFVLLM
                     QSTSPFYAAILGRVFLGEPVSRDTLWAIAVAGIGVVVMVGGNVGVGDPVGILLSVLLP
                     VALGGYAVLIRSAPARDPGVPTLIGGTTAAVVAGLVAASGPGVGVPAFDLWMAFIAGG
                     LMIGVFTPIWNYVHRFVPPADVSLLLISEVVMAPLWVWIWQEEEPTAETLVGGAIALG
                     AVLWLTIRAARSGRHELPDRMGRVRGLHVGAVPGFRRYRELDDESV"
BASE COUNT          760 a         1316 c         1111 g          578 t
ORIGIN      
        1 accatcggcc ggctccacga aactgatctc gccctcgtca agcgacactg cgttgcccga
       61 gcgagacacc cccaaggcgt ctgcccaacg ttcagccatg gccgccgggt cgtcagcctg
      121 gacctcgacg gcgacgagat ccgagaccac gccagtccgt acgtggtcgc tccaagccgg
      181 tccggcccac ggccagtctg cccagtcctc ggtctcgtcg atcgagagga tggcaccacc
      241 gacgtctttg ggatggatat gcactccttc gatgcccggc atcttcgcgt ccaggacgat
      301 acgaataccg agatcggcga gtcgacggcg atctccggcc aggtcatcgg tctggatgag
      361 gaccatgtag ccaccatccc catcacggcg ttccaactgt cgaccggcgg tcgttccggt
      421 cgccgtcggg gagacgacct ccaggaggca ctcccccacc gggaacagca cgtttcggag
      481 gccgaactgc gataccccga gatcatggac gcacggttcc aggcccagat gggcgatcag
      541 atcacgctcc acgagatcga ggtcgtgggc caccagagct acctgccgta gtcgaagagt
      601 cacggctacg aaggtaaccc agcgaccggc cagccgacct aatcgtcgtt gctacggtcg
      661 gtcgaatgca gacccgtcgc ctcggtcgga ccgaccatca aagcagcatc gccatcctgg
      721 gcggtgcggc cttcgccgcc gacacttccg atgagtctgc cgtgttcctc cacgaggcga
      781 tcgacgccgg gatcaaccac ctcgacatcg cccccggata cgggctcgct gaacgggctg
      841 tcggccctca tatcccagcg cttcgggacc gcctgttcgt ggccggcaag acagccgaga
      901 ccgagcgcga ctgggcccgc acccgtctgc gacgcaccct cgaccgactg caggtcgact
      961 atctcgacct ctaccaggcc cacggcgtga cctccctgga ggtcctcgac cagcgggccg
     1021 aggcgttcga ggtcattctc gaagcacgag atcagggcct gacccgtttc gtcggcgtca
     1081 ccggccacga cctcaccgcc ccgcgagctc acctcgaggc ggtccgccgc tacgacctcg
     1141 acacggtgat gttccccgtc tacccgcggg tcatggccga cgccgactac cgggccgacg
     1201 tcgaggcgct gctggctgag tgcatcaacc gggacgtggg cgtcatggcc atcaaagccg
     1261 tggcctggcg accttgggga gaccgaacgc cggatttacg cacctggtac gaaccgcaac
     1321 gaacccccaa ggggattgag gacggggtcc gcttcgcgct ctcgacgccg agcgtcgacg
     1381 ccttctgcac gcccagcgac aagaccaccg cccgactggc gatcgctgcc gcagaacgac
     1441 tcgagcccct cgacgccacc gaatggaccg ccctcctgtc gaccgatgag gccttcatct
     1501 tccccttggt ggaccacgca gtatcggcct ggggttgagc aactcgtctg gcagaccgtc
     1561 ccccgatacg tgacagaatc tccgttcgtc ttaccccatc aaatgaaacg agcaacgatc
     1621 catggcagcg atgcagttca agggatccat caagggacgc gaactcccgg cgatggacga
     1681 gttcgacgcc aacgcattcc tcgacgactt cgccgtctcc gaggaccccg acaagccgat
     1741 caccgccggg tgctatcgcc ttgaggcagg ccagtcgatg acctacacgt acacgtacca
     1801 cgagatgaag ttgatcgtcg atggtgagat caccattgcc gacgacaccg gccagtcggt
     1861 gacggccacc aagggcgacc tcttctactt ccctccaggc agcacaatca ccttctcgac
     1921 cgaggactac ggcgtcggct acttcgtggg gcagcggggc gtcggcgagg cctaggcaag
     1981 acacggaaaa ctcaaccaaa tttcctgtgg tcagtaaacg cccggttaga tatcggaact
     2041 cgtacgctta cccctgccgg ttcgacaacc gacccggtct tgttcaaaag aaagcgatac
     2101 ctgaatatgc cgaacggcac cgtgaagttt ttcaatgcag aaaagggcta cgggttcctc
     2161 tccgtgtccg gtgaagaaga tgtcttcgtt cactactcca acatcgaggg cgagggctac
     2221 cgcagcctcg acgagggtca ggccgtcgaa ttcgaggtcg gccccggccg caagggcccc
     2281 gaggctctga acgtccgcaa ggtctgagtc cgaactggtg cgctgggccc tggcgttagc
     2341 ctgaggccac agcccaaccc gctgcacgct tccccttcgg ggtgaggtgg cagagagccc
     2401 gtcccacggg gcgggttctt tcgcgtccgg gcccggatca gacgctctcg tcgtcgagct
     2461 cccggtagcg ccgaaatccc ggcacggcgc cgacatgcag tccccgcacc cggcccatgc
     2521 gatccggcaa ctcatgccga ccagaccgtg ccgcccggat ggtcaaccac aggacggccc
     2581 ccaaggcaat tgccccacct accaatgtct cagccgtcgg ctcttcctct tgccagatcc
     2641 agacccacaa cggggccatc acgacctcgg agatgaggag cagactgacg tcggcaggcg
     2701 gcacgaaccg gtggacgtag ttccagatcg gggtgaagac cccgatcatc aggcccccgg
     2761 caatgaaggc catccagagg tcgaatgccg gaacacccac accggggccc gaggccgcca
     2821 ccagcccggc caccacagca gctgtcgtgc caccgatgag ggtcggcacc ccggggtcac
     2881 gcgccggggc actccggatc agaaccgcgt aaccgccgag agccacaggc agaagaaccg
     2941 aaaggaggat ccccaccggg tcgcctacac ctacgtttcc gcccaccatc actacgacac
     3001 cgattccagc aaccgctatg gcccacaacg tgtcccggct gaccggctca ccgaggaaca
     3061 cccggccgag gatcgccgcg tagaacgggc tcgtcgactg catcagcaac acgaaagccg
     3121 ctgagacccg gctgagcgcc acaacgaaga gagtgaacat cgcggcaaac aggaacccgg
     3181 cgagcacctg tcgaacgccg gcgtccatga ccgcacggac cgggctacga cctgccgcca
     3241 cgatgatcac gagagacacc gctgctgcga agaagctccg gtaggtgagg tactgccact
     3301 cgtcggcctc atggagagcc cgaagggtga gcggcccgaa gctgaatgcc actccacaga
     3361 gcagtacggc gaccgaaccc tggaaccgat tcagtgtggg cgccatcggc ctactgctcc
     3421 tgaggaggga tctactggga ctccagcggt caccggactc tagatgaccg aacccagcac
     3481 ctacgaccaa ctggaaacgg caagggtgcc tctagtcacc cgcccgggga actggccgct
     3541 ggcccagtag tctgttggta cgccgatgga taaacctcgg tgggttcgct gacgggagat
     3601 ggttccccgg tcgaggtgaa ccacccgctc cgccgatcag tgccgggcga tcccatcaga
     3661 agcctttctg aggcaggccc caagaaccgc gggccggaga acacatgtca tccccaacct
     3721 tcgccgatct cggcgtgccc tctgcgatct gcgatgcgct cagcg
//
LOCUS       DASCMR010000201         3033 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001001609, whole genome shotgun sequence.
ACCESSION   DASCMR010000201 DASCMR010000000
VERSION     DASCMR010000201.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3033)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3033)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3033
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001001609"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..622
                     /locus_tag="QGG16_04905"
     CDS             <1..622
                     /locus_tag="QGG16_04905"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP24647.1"
                     /translation="SYLLLDMTTPGIEVRPIVEMTGGRHFNETFLTDVEIPVENLVGT
                     ENEGWRLAKVTLANERVSLSQGGVLWGRGPDDPTVLDRIRELGCEDPILRQRVADLYT
                     EMAVLRLLNQRVMSAQLTGGDPGPLSSIRKAIGDKHGQKAMTLVKDLEGPSTMLDGHY
                     PYEEDEDLWAWGHYFSRALTIGGGTSEVQRNIIGERLLGLPREPRP"
     gene            674..1483
                     /locus_tag="QGG16_04910"
     CDS             674..1483
                     /locus_tag="QGG16_04910"
                     /inference="COORDINATES: protein motif:HMM:NF012596.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HJP24648.1"
                     /translation="MSDDSRFDEFEYMRFERDGDVLVVTVDKPDDDLNKVDAQMHHEL
                     ALLFKELREEREARAVLLAGTEQAFTAGGDFAWFPRFAEPGYAADIRLDGKSIVWNML
                     DVHLPIVCAVTGHAMGLGASIALLADITVMSDTARLGDPHVKVGIVAGDGGTVAWPLA
                     VGPQLAKRYLLTGDPVTAADAEKMGLIVESAPDPEACMAAGLAWAKRLAAGAPQAVQF
                     TKQAVNTWIKQTCGPAFDLSTALETVTFASEDFHEALAALAEKREPRFTGK"
     gene            1507..2193
                     /locus_tag="QGG16_04915"
     CDS             1507..2193
                     /locus_tag="QGG16_04915"
                     /inference="COORDINATES: protein motif:HMM:NF013077.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HJP24649.1"
                     /translation="MTFETGGARGNEIGLLDGLMTNRAMRRYSDEPVSDEDIWTCLQA
                     AVQAPSGGNIQPYQFVVVQDPVQKVGLAEIYRRGWRRYEPAIAPTEFPNDAVREGWER
                     NSRATVHLAENLEHVPVLVLLLMPSIDMTVHDDEGPMPVGPTHASVYPAIQNFMLAAR
                     SLGLGTAMTTLHRIYEDDVRELVGIPERYEVLALLPLGHPTGKWGVAPRHRGADKITS
                     WDQFGEKRTP"
     gene            2203..>3033
                     /locus_tag="QGG16_04920"
     CDS             2203..>3033
                     /locus_tag="QGG16_04920"
                     /inference="COORDINATES: protein motif:HMM:NF012517.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HJP24650.1"
                     /translation="MANQRAGNHMAQGVRVGVSIPPAGFASHDDATAYVHGAADADLD
                     HVFTADHVSFFDGRGMDGLMKVSWLAGLHPTIGVYVGVYLLALRHPVAVARQVATLAE
                     QAPGRLTFGVGVGGEDRHEMEVVGVDPSTRGRRTDEALDVLRPLLAGEAVDHHGEFYD
                     APDVSIRPAPTPPVPVTVGGRSDAAARRAGRRGDGWLASWCSPRRFTEGVHIAEQAAA
                     ASGRDAVAWRHGYQIWVGLGDTPAEGAALLAPAMEKFYGAPWAAFERYSPVGTPADIV
                     E"
BASE COUNT          536 a         1010 c         1007 g          480 t
ORIGIN      
        1 ctcgtaccta ctgttggaca tgaccacacc gggcatcgag gtccgtccca tcgtggagat
       61 gaccggtggc cggcacttca acgagacgtt cctgaccgac gtggagattc ctgtcgagaa
      121 tctggtgggc accgagaacg agggctggcg cctcgccaaa gtaacgctgg ctaacgaacg
      181 ggtatccctc tcccaaggcg gcgttctatg gggccgcggc cccgacgacc caacggtgct
      241 ggaccgcatc cgcgaactgg gctgtgaaga cccgatcctt cgccaacggg tggctgacct
      301 ctacaccgag atggcggtgt tgcgccttct gaaccagcgg gtcatgagcg cccagttgac
      361 cggcggcgat cctgggccgt tgtcgtcaat ccgcaaggcc attggcgaca agcacggaca
      421 gaaggccatg acgctggtga aggacctcga gggaccgtcg accatgctgg acggtcacta
      481 cccgtatgag gaggacgaag acctctgggc atgggggcac tacttctccc gagcactcac
      541 cattggaggt ggcaccagcg aggtccaacg caacatcatc ggggaacgcc ttctggggct
      601 cccccgtgaa cctcgaccct gacccttcct gaacacgacc cctagaacga cccagagaaa
      661 caggagacaa ccggtgtccg acgattcccg attcgacgag tttgagtaca tgcggttcga
      721 gcgcgacggc gacgtcttgg tcgtcaccgt tgacaagccc gatgacgacc tgaacaaggt
      781 cgatgcccag atgcaccacg agttagcgct gctgttcaag gagttgcgcg aggaacgcga
      841 agcccgagcc gtgctgctgg ctggcaccga acaggccttc accgccggcg gcgacttcgc
      901 ctggtttccc cggttcgccg agcccggcta tgccgccgac atccgcttgg acggcaagtc
      961 aatcgtgtgg aacatgctcg acgtgcacct ccccatagtg tgcgcggtga ccggccacgc
     1021 catgggcctc ggggccagca tcgccctgct ggccgacatc accgtgatgt ccgatacggc
     1081 ccgcctcggc gacccgcatg tcaaggtggg gatcgtggcc ggcgacggcg gcaccgtggc
     1141 ctggcccctg gccgtcggcc cgcagttggc caagcggtac ctgctaaccg gtgacccggt
     1201 caccgcggcc gacgccgaaa agatggggct gatcgtagag tcggcgcccg accccgaggc
     1261 ctgcatggct gccggcctgg cgtgggcgaa gcgcctggcc gccggtgccc cccaggctgt
     1321 gcagttcacc aagcaggcgg tcaacacgtg gatcaaacag acttgcggcc ccgccttcga
     1381 cctgtcgacg gccctggaga cggtgacctt cgcgtcggag gacttccacg aggccctagc
     1441 cgccctagcc gaaaagcgcg agccccggtt caccgggaaa tagtcgatca gaaactggag
     1501 agcaccatga ccttcgagac gggcggagcc cgcggcaacg agatcgggct gttggacggc
     1561 ctgatgacca accgggccat gcgccggtac agcgacgaac cagtgtccga cgaggacatc
     1621 tggacctgtc tgcaggccgc cgttcaggcc cccagtggcg gcaacatcca gccgtaccag
     1681 ttcgtggtcg tgcaggaccc cgtgcagaaa gtcgggctgg cagagatcta ccgacgcggt
     1741 tggcggcgct acgaaccggc tatcgctcct accgagttcc ccaacgacgc ggtccgcgag
     1801 ggctgggaac gcaacagccg ggccaccgtg catctggccg aaaacctcga acacgtaccg
     1861 gtgctggtgc tgctgctcat gccgtccatc gacatgacgg tccacgacga cgagggaccg
     1921 atgcccgtcg gcccgaccca cgcctcggtg tacccggcta tccagaactt catgctggcc
     1981 gctcggtccc tcggactggg tacggcgatg accacgctgc accgaatcta tgaggacgac
     2041 gtgcgcgagt tggtgggcat cccagagcgc tacgaggtcc tggccttgct gcccctcggt
     2101 caccccaccg gaaagtgggg cgtggctccc cgtcatcggg gcgccgacaa gatcacctca
     2161 tgggaccagt ttggcgagaa gcgaacgccg tgaaccacgg gcatggctaa ccagcgggcc
     2221 gggaatcaca tggcccaagg ggttcgggtc ggcgtgtcca tcccgccggc tggcttcgca
     2281 tcgcatgacg acgcaacggc ctacgtgcac ggagcagctg atgcggacct cgaccacgtg
     2341 ttcaccgccg accacgtgtc gttcttcgac ggtcgcggca tggacggcct catgaaggtc
     2401 tcatggctag ctggcctaca tcccaccatc ggcgtgtacg tcggtgtgta cctgctggcc
     2461 ctgcgccatc cggttgccgt ggcccgtcag gtggcaacgc tggccgaaca ggcgcctggg
     2521 cgactgacct tcggtgtggg cgtgggtggc gaggaccgcc acgaaatgga ggtggtgggc
     2581 gttgacccgt caacccgtgg acgtcgtacc gacgaggccc tcgacgtgct gcgacccctg
     2641 ctggctggcg aggcggtcga ccaccacggt gagttctacg acgcgcctga cgtctcgatc
     2701 cgccccgcgc cgaccccacc ggtaccggta accgtgggtg gccggtccga cgcggctgcc
     2761 agacgggccg gtcggcgggg ggacgggtgg cttgcctcat ggtgctcgcc acgccggttc
     2821 accgaaggcg tgcacatcgc tgagcaggcg gccgctgcga gcggccgtga cgccgtggcg
     2881 tggcgacacg gctaccaaat ctgggtgggc ctgggtgaca cgccggccga gggtgcggcg
     2941 ctactggccc ccgccatgga gaagttctac ggtgcgccgt gggcagcctt cgagcgctac
     3001 tcgccggtcg gcacgccagc cgacatcgtg gag
//
LOCUS       DASCMR010000202         4028 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001003248, whole genome shotgun sequence.
ACCESSION   DASCMR010000202 DASCMR010000000
VERSION     DASCMR010000202.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4028)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4028)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4028
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001003248"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..737)
                     /locus_tag="QGG16_04925"
     CDS             complement(<1..737)
                     /locus_tag="QGG16_04925"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004073 - aspartate-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HJP24651.1"
                     /translation="MDIAIVGATGQVGGVMRTLLAERAFPVGTLRFFASARSAGSTIA
                     WSDREIVVEDTATADWSGIDVALVSAGKTASMEFSPQMAAAGATVIDNSSGWRMDPDV
                     PLVVPEVNAHELDDIPKGIVANPNCTTMAAMPVLAPLHAEAGLRSLTIATYQAVSGAG
                     LAGVAELASQVSAVIDGASGLAHDGRAVAFPEPSSFPSTIAFNVLAHAGSFVEDGRGE
                     TDEEQKLRNESRKILGIPDLAVSGTCVR"
     gene            complement(810..1337)
                     /locus_tag="QGG16_04930"
     CDS             complement(810..1337)
                     /locus_tag="QGG16_04930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24652.1"
                     /translation="MTVTPSTTVPASTSMAPSTSVAPTTSLAGGPIPEAAAGFCAELA
                     VESGELILEVERVLPDDGLLDPRSQHALLLATRNLLAWTNNRVPAELRADVGLLNRVY
                     ADLGIQLDRLNPETVTMPRLQALVFTYVLDSQMVEAGDLDLSAQRLGAFVDQACGRGF
                     PIMESMPDLFAPVSK"
     gene            complement(1523..2611)
                     /locus_tag="QGG16_04935"
     CDS             complement(1523..2611)
                     /locus_tag="QGG16_04935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24653.1"
                     /translation="MRTNPRSALVGLLFSALFVISACGSGATHGGTVAADADPGTTEA
                     VSTTMLSVSTTTVSSDDARSGFVSDVSAAAPILEGLTEADLGCVADRLLVEVDPAEVV
                     ALTRNGPRPDQASLAVAALRDCDLVVAVVGLGIGQSLAADPDAPPIEPACMLKGVTAD
                     DLVPYLEERFETGVVNLDDDEAMDLLLDTPVMANMIRCSAEAMLDISTDAPAVCAGLA
                     EHLGLMMATLMEMEPEPGAEPDPFALVGVFRVTDEVFAWLVDEVPPDLRDDAKLVRET
                     TGRIGTLMAEALGDLAEASEDDLAADSAANEARMAAFLGMMARVAADLEADMDEVDPA
                     AARLRDWTIATCGDSSSMLFEFLTGMWG"
     gene            complement(2691..3908)
                     /locus_tag="QGG16_04940"
     CDS             complement(2691..3908)
                     /locus_tag="QGG16_04940"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HJP24654.1"
                     /translation="MALIVQKFGGTSVADADRMREVADHVARTVRRGDQVVLVVSAMG
                     KETDELLRLAGEVSVTHPGREMDMLITAGERKAMALVCMALHHIGVDSESFTGSQAGF
                     LTDTNHQNAKIVDVRPDRVRASLDAGRVPVLGGSQGVSTDNDVTFLGRGGSDTTAVAI
                     AHALGADACELYTDVTGVFTTDPRVVPTARRMSAISFDELLEMTATGCPKPAMRSVEY
                     ARTHGVRLHVRSAFTWQEGTWVDEEVPEMEQAIVSAVTHDTSEAKMTLAGVPDQPGVA
                     ATVFRALADLEVNVDMIVQNVSAQGVTDISFTVPHADLARAMEHTKRLATEVGAGGVT
                     SDDSIARVSVVGAGMRSNPGVAATMFETLAAAEVNIQMISTSAIRVSCVVDGERVEDA
                     VRTLHDAFGLAEA"
BASE COUNT          731 a         1358 c         1297 g          642 t
ORIGIN      
        1 cgcacgcatg tccccgacac cgcgaggtcc gggatgccca ggatctttcg gctctcatta
       61 cggagcttct gctcctcgtc ggtctcacct cgtccgtctt ccacgaacga cccggcgtgg
      121 gccaatacgt tgaacgcaat ggtcgagggg aatgacgacg gctcggggaa cgccaccgcc
      181 cgaccgtcat gggccaaacc cgacgcgccg tcgatcaccg cgctgacctg ggaggccagt
      241 tcagcgacac cggcgagacc ggcaccggag accgcctggt aggtggcgat ggtcagggac
      301 cgcaggcccg cctcggcatg cagcggggcc aacaccggca tggcggccat ggtcgtgcag
      361 ttcgggttgg cgacaatccc cttggggatg tcgtcgagtt cgtgggcgtt gacctcggga
      421 accacgaggg gcacgtcggg gtccattcgc caacccgacg agttgtcgat caccgtggcg
      481 cctgccgcgg ccatctgcgg cgaaaactcc atcgacgccg tcttcccggc gctcaccagg
      541 gctacgtcga tgcccgacca gtcggcggtc gccgtgtcct ctacaacgat ctcgcgatcg
      601 ctccaggcaa ttgtggaacc cgccgatcgg gctgaggcga agaaccggag ggttccgacc
      661 ggaaaggcgc gttcggcgag cagggtgcgc atgacgcccc cgacctgacc ggtggcgccg
      721 acaatggcga tgtccatgga aataaggcta tccaccgtcc gtctcgtgcc tgcccgagat
      781 tcgcaggccg aggccagacg gatcctcgtc tatttggaaa cgggtgcgaa aaggtctggc
      841 atcgactcca tgatcggaaa gccgcggcca caggcctgat cgacgaaggc ccccagacgt
      901 tgggccgaca gatccaggtc cccggcttcg accatctggg agtcgagcac gtaggtgaag
      961 accagggcct gaaggcgcgg catggtaacc gtctcggggt tcaggcggtc cagttggatt
     1021 cccagatcgg cgtagacccg gttcaacagg cccacgtcgg ctcggagctc ggcgggcacc
     1081 cggttgttgg tccacgccag gaggttccgg gtggccagca acagggcgtg ttggctgcgt
     1141 ggatccaaga ggccgtcgtc gggcagcacc cgctccacct cgaggatcaa ctcgccggac
     1201 tcgacggcca actcagcgca gaaaccagcg gccgcctcgg gaatcggtcc gccagccaac
     1261 gaggtggtcg gggcaacgct ggtcgacggc gccatcgacg tcgaggcagg cacggtggtg
     1321 ctcggagtca ccgtcatcga gggggcctca gtggtcgcgg gcgccgacgt ggtagccggg
     1381 gtctctccga tagtcgtagg gggtggggct gtcagtgtcg accccccacc acacgccgat
     1441 accaccagac tggttagcgc gatcaagacc ggcaccacag ttcgtaagac ggatctgatc
     1501 accgccgcgc caccttccga catcagcccc acatgccggt caggaactcg aacaacatcg
     1561 acgaggaatc accacaggta gcgatcgtcc agtcacggag gcgtgcggct gccgggtcca
     1621 cctcgtccat gtctgcctca aggtccgccg cgacacgggc catcatcccc aggaaggccg
     1681 ccatccgtgc ctcgttcgct gcggaatcgg ccgctaggtc gtcctcggaa gcttcagcca
     1741 ggtccccgag agcctcagcc atgagggtcc cgatccggcc ggtggtctcc cgtaccagtt
     1801 tggcgtcatc ccgcagatcc ggagggacct cgtcgaccag ccaggcaaag acctcgtcgg
     1861 tcacccggaa gacgcccacc agtgcgaacg gatccggctc ggcccccggc tctggttcca
     1921 tttccatgag ggtggccatc atcagcccga ggtgttcggc cagaccggca caaaccgccg
     1981 gggcatcggt cgatatgtcc aacatggcct cggccgagca tcgaatcatg ttggccatca
     2041 ccggggtgtc caacaaaagg tccatggcct cgtcgtcgtc gaggttcacc acaccggtct
     2101 cgaaccgctc ctccaggtag ggaacgaggt catcggccgt aacccccttg agcatgcacg
     2161 cgggttcgat gggcggtgca tcgggatcgg cggcgagcga ctggccgatg cccaggccca
     2221 ccacggcgac cactaggtca cagtcccgaa gggcggccac cgctagggac gcttggtcgg
     2281 gacggggacc atttcgggtt agggccacta cctcagccgg atccacctcg accagcagac
     2341 ggtcagccac gcaccccaag tcggcctcgg tgagaccctc gagaatcggt gcggcagccg
     2401 acacatcgga cacaaacccg ctacgggcgt cgtccgatga aaccgtggtg gtcgacaccg
     2461 acagcatcgt ggtcgagacc gcctcggtgg tcccggggtc ggcatcggcc gcgaccgtac
     2521 cgccgtgagt ggctcccgaa ccacaggccg agatcacgaa cagcgcgcta aacaggagac
     2581 cgactagcgc cgatcgtgga ttggtcctca tgggaacgcc ctcaagatcg tgtgtgcacc
     2641 agggaaggtg atcgcccatt aggtgaaggg agggatcgga gagacgggac ttaggcctca
     2701 gccaagccga aggcatcgtg gagggtcctc accgcatcct ccacccgctc gccatcgacc
     2761 acacagctca cgcggatggc cgacgtcgag atcatctgaa tgttgacttc ggcggctgcc
     2821 aacgtctcaa acatggtggc ggccacgccg gggttggacc gcataccggc accgaccacg
     2881 cttactcggg cgatcgagtc atccgacgtc acgccgccgg ccccaacctc ggtggccaga
     2941 cgcttcgtat gttccatggc ccgtgccaga tcggcgtggg gcacggtgaa cgagatgtcg
     3001 gtcacgccct gagcggacac gttctgcacg atcatgtcca cgttcacctc gaggtcggcc
     3061 agcgcacgga acaccgtggc tgccaccccg ggctgatcgg gcacgccggc caacgtcatc
     3121 ttggcctcag acgtgtcgtg ggtgaccgcc gagacgatgg cctgttccat ttcgggtacc
     3181 tcctcgtcga cccacgtccc ctcctgccag gtgaaggcgg aacggacgtg gaggcgcacc
     3241 ccgtgggtgc gcgcgtattc aaccgaccgc atggccggct tgggacaacc tgtcgccgtc
     3301 atctccaaca actcgtcaaa ggagatggcg gacatgcgtc gagccgtggg cacgacccgg
     3361 ggatcggtgg tgaacacccc ggtcacgtcg gtgtagagct cacaggcatc agcgcctagg
     3421 gcgtgggcga tggccactgc cgttgtgtcg gatccgccac gccccagaaa ggtcacgtca
     3481 ttgtcggtcg acacgccctg cgacccaccg agcaccggca cccggccggc atccagcgac
     3541 gcacggacac gatcgggccg gacatcgacg atcttggcgt tctgatggtt ggtgtcggtc
     3601 aggaagccag cctggctgcc ggtgaacgac tcggagtcca ccccgatgtg gtgcagggcc
     3661 atgcatacga gcgccatggc cttgcgttca ccggccgtga tgagcatgtc catctcacgg
     3721 cccgggtggg taaccgacac ctcgccggcc agccgcagca actcgtcggt ctccttgccc
     3781 atagccgaga ccacgaggac cacctggtcg ccacgccgca cggttcgggc aacgtgatcg
     3841 gctacctcgc gcatgcgatc cgcatccgcg accgaggtgc ctccgaactt ctggacgatg
     3901 agtgccacgg ggctccacgc taccggcgcc ccatgcgccg tctgttgcag gttcctggtg
     3961 ggcaccggtc cgatcgatcc gctcccggtc ttcgtcggta gggtgccgat ccatggtcca
     4021 gaagtccc
//
LOCUS       DASCMR010000203         1652 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001016002, whole genome shotgun sequence.
ACCESSION   DASCMR010000203 DASCMR010000000
VERSION     DASCMR010000203.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1652)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1652)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1652
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001016002"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1652)
                     /locus_tag="QGG16_04945"
     CDS             complement(<1..>1652)
                     /locus_tag="QGG16_04945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glutamate synthase central domain-containing
                     protein"
                     /protein_id="HJP24655.1"
                     /translation="RNWMRAREALLATDTIPGDLDRLFPICTPGASDSAGFDEALELL
                     TLGGYSLPEAVLMMIPEPWENHAEMSDERRAFYQYHASLMEPWDGPASIAFTDGTVMG
                     AVLDRNGLRPSRYWVTADDLVVMASEVGVVEVPTAEVVEKGRLEPGRMFLIDTTEGRI
                     IRDDEIKSGMASGRPYREWLEQNLVYLDDLPAHERVSNDDCTLQQLQQAYGYTHEALK
                     VVLAPMVRDGKGAIGSMGTDTPVAVLSDQSRPLYDYFQQLFAQVTNPPLDAIREELIT
                     ALCSTVGPEGNLLDPAPESCRQIHLPHPVLTEAQLASIVGLGRGSTGSDSLPTGFSAR
                     VLDGRYEVARGATGLTEALTRLRAEASAAVDDGVSFIVLSDRCPTANLAPIPSLLATG
                     AVHHHLIAEKTRTRVGLLVESGDAREVHHISLLLGYGASAVCPYLAFATIDALVGEGM
                     YGLSPGLTLEQSRSNFIKACDQGLLKIMSKMGISTVASYSGGQIFEAIGLGDQVIGSC
                     FKGTVSRLGGVGFEVLAAEVAERHALAFPTNPEERAHRTLEV"
BASE COUNT          306 a          498 c          537 g          311 t
ORIGIN      
        1 cacctccagg gtgcgatgtg cccgttcctc cggattcgtt ggaaaggcca gggcatggcg
       61 ttcagccacc tcggccgcca acacttcgaa gccgactccc cctagacggc tcacagtgcc
      121 tttgaagcat gacccgatga cttggtcgcc cagaccgatt gcttcgaaaa tctgcccacc
      181 gctgtatgac gcgacggtgg atatgcccat tttggacatg atcttgagga gcccctggtc
      241 gcaggccttg atgaagttgg agcgcgactg ttccaaggtc aggccaggcg agaggccgta
      301 catcccctcg ccgaccagcg cgtcgatggt ggcgaaagct aggtatggac acacggccga
      361 ggcgccgtat cccagcagca ggctgatgtg atgaacctcg cgggcgtcgc cgctctccac
      421 caagaggccc acgcgggtcc gggtcttttc ggcgattagg tgatggtgca ctgcgccggt
      481 ggccagcagg gatggtatgg gagccaggtt ggctgtcggg cagcggtcag acagcacgat
      541 gaaactcacg ccatcgtcca ccgccgccga ggcttcggcc ctcaaccggg ttaatgcctc
      601 tgtgaggccg gtggcacctc gggccacctc atagcgaccg tccagcaccc gggcggagaa
      661 gcctgtcggc aaactatcgg agccggtaga gccacgaccg agtccgacga tcgacgccaa
      721 ctgggcttcg gttaggacgg gatgtggtaa atggatctgt cgacagctct ccggcgcggg
      781 gtccagcaga tttccctccg ggccgacggt tgagcacagc gcagtgatga gctcttcgcg
      841 tatggcgtct agtggcggat tggtgacctg ggcgaagagt tgttggaaat agtcgtagag
      901 cggtcgggac tggtccgaga ggacagctac cggcgtatca gtacccatgg agccaatcgc
      961 gcccttgccg tcgcggacca tcggagcaag caccaccttt agagcctcat gcgtgtagcc
     1021 gtaagcctgc tggagttgct ggagagtgca atcgtcgtta ctgacacgtt cgtgggccgg
     1081 aaggtcgtcc aggtagacga ggttctgctc cagccactcc cgatatgggc gaccggaggc
     1141 catgcccgac ttgatctcgt cgtcgcggat gatgcgaccc tcggtggtat cgatgaggaa
     1201 catccgtccg ggttcaaggc gacccttctc gaccacttca gcggtcggga cctcgaccac
     1261 tccgacctca ctggccatga ccacaaggtc gtcggcggtt acccagtagc ggctgggtcg
     1321 taggccgttt cgatctagga cagcacccat cacggttccg tcggtgaatg cgatcgaggc
     1381 tgggccatcc catggctcca tcagggatgc gtggtattgg tagaaggccc ggcgttcgtc
     1441 ggacatctcg gcgtggttct cccacggctc ggggatcatc atcagaaccg cctcgggaag
     1501 cgagtagccc cccaaggtaa ggagttcgag cgcttcgtcg aagccggcgc tgtcactggc
     1561 gcccggcgtg cagatcggaa acagtcggtc cagatcgccc ggaatcgtgt cggtggccag
     1621 aagggcctca cgggctcgca tccagttgcg gt
//
LOCUS       DASCMR010000204         1617 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001016441, whole genome shotgun sequence.
ACCESSION   DASCMR010000204 DASCMR010000000
VERSION     DASCMR010000204.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1617)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1617)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001016441"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(87..>1617)
                     /locus_tag="QGG16_04950"
     CDS             complement(87..>1617)
                     /locus_tag="QGG16_04950"
                     /inference="COORDINATES: protein motif:HMM:NF019581.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJP24656.1"
                     /translation="HTHYDAQVFWDGTLSPSPLHGVTTVIGGNCGFTIAPLSDNPADG
                     EYLMRMLSRVEGMPLESLREGVPWNWRTTAEYLDAVDPLLAVNAGFKVGHSAIRRVVM
                     GDEATGREATDAELDAMAALLSDGLSAGAMGFSSTWSTTHNDAEGRPVPSRHASRNEV
                     LALCSVLVDYPGTSLEMLAAAGGPTDDESKSLLCDMSLAAGGRQVNWNVMQVTASTID
                     ECFEKLEASSYAAERGGRVVALTIPMVIAARFSMASGFVLDAIPGWAEVMFLPHEEKK
                     RVLADPAERRRLDDLAQGDHPFRRLANWGAMTIFDTVAPENDGCDGRTVADIAAERGC
                     GEFDALLDICLADDLLTSFGRPDVPASVADWQARIDIWRDGRAVIGASDAGAHLDLLA
                     TFNYPTRVLAEPVRQHGLLSLEEAIHRMTAVQADLYGLVDRGRLVEGAHADVILIDED
                     IVDSDPVAMRPDLPGGAARLYAGATGIDDVLVAGVPVVADGAFTKYRPGRVLRSGTDS
                     R"
BASE COUNT          270 a          508 c          581 g          258 t
ORIGIN      
        1 ggtcggttgg agtggtgtgg gcgatgacgt agtcgtggag tgcgtcatcc agaaagaagg
       61 atcgatggtc ggccatgtgc gtttcctcag cgactgtcgg tgccgctacg cagcacccgt
      121 ccgggacggt atttggtgaa cgctccgtcg gccaccacag gcacaccggc taccagaacg
      181 tcgtcgatac cggtggcgcc ggcgtagagg cgggccgctc cgccgggcag atcggggcgc
      241 atggcgaccg ggtcggagtc cacgatgtcc tcgtcgatca ggatcacgtc ggcgtgggca
      301 ccctcgacga ggcggccacg gtccaccagg ccgtacaggt cagcctggac ggcggtcatc
      361 cggtggatcg cctcctccag ggagagcagc ccatgctggc ggaccggctc agcgagcacc
      421 cgggtggggt agttgaaggt ggccagcagg tcgaggtggg ctccggcgtc cgatgcacca
      481 atgaccgccc ggccatcgcg ccagatgtcg atccgggcct gccagtcggc aacagaggcc
      541 ggtacgtcgg gccgtccaaa cgaggtcagg aggtcgtcgg ccagacagat gtcgagtagg
      601 gcgtcgaact cgccgcaacc ccgctccgca gcgatgtcgg ccaccgtgcg accatcgcac
      661 ccgtcgttct caggcgcaac ggtgtcgaag atggtcatgg cgccccagtt ggccagccgt
      721 cggaacggat ggtcaccctg agccagatcg tcgaggcgtc ggcgttcggc tgggtcggcc
      781 agcacccgct tcttctcctc gtgggggagg aacatgacct cggcccagcc ggggatggcg
      841 tccagcacga agccgctggc catcgaaaag cgggcggcga tgaccatggg gatggtgagg
      901 gctaccacgc ggccgccccg ttcagcggcg taggacgacg cctccaactt ctcgaaacat
      961 tcgtcgatgg tggaggcggt gacctgcatg acgttccagt tgacctggcg gccgccggcg
     1021 gccagagaca tgtcgcagag cagggatttc gattcgtcgt ccgttggccc gcccgcagcg
     1081 gccagcatct cgaggctggt gccggggtag tcgacgagca ccgaacagag ggcgagtact
     1141 tcgttccggg aggcgtgccg actggggacc ggtcgccctt cggcgtcatt gtgggtggtc
     1201 gaccatgtcg acgagaaacc catggcgccg gccgacaggc cgtcgctgag cagggcggcc
     1261 atggcgtcca actccgcatc ggtggcctcg cgtccagtgg cttcgtcgcc catgacgacc
     1321 cgtcgtatag ccgagtggcc gaccttgaag ccggcgttga cagctaggag cgggtcgacg
     1381 gcatcgaggt actcggcggt ggtccgccag ttccacggca cgccttcgcg gagcgactcc
     1441 aagggcatgc cctcgacgcg cgagagcatc cgcatgaggt actcgccgtc ggccggattg
     1501 tcggacagcg gcgcgatcgt gaagccacag ttccccccga tgaccgtggt gaccccatgc
     1561 agaggtgaag ggctaagcgt gccgtcccag aagacctggg cgtcgtagtg ggtgtgg
//
LOCUS       DASCMR010000205         6649 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001016864, whole genome shotgun sequence.
ACCESSION   DASCMR010000205 DASCMR010000000
VERSION     DASCMR010000205.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 6649)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6649)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6649
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001016864"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..884
                     /locus_tag="QGG16_04955"
     CDS             <1..884
                     /locus_tag="QGG16_04955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="monooxygenase"
                     /protein_id="HJP24657.1"
                     /translation="SGVPQTEDLVDDGWTDLIGMMIRRFRDAQADGSADIAEILEMAN
                     FDKMNEIRSRVDGLVDSPEIAEKLKPYYRMFCKRPTFNDEYLPAFNRPNVELVDTAGK
                     GVDRITEHGLVVDGVEYEVDCIIFATGFEVGTSYARRAGYEIVGSRGQTLSEKWATGM
                     STLHGMQSRGFPNCFFMQISQAAFTANFPHLLDELTTHLAHIIGHALQQGAATVEVSE
                     QGEEAWVATIVEKGLGAMGTLGGADCTPGYYNNEGQAREPSAIQAAPYGGGSIEFFQL
                     LEGWRADGNFDGLEFTD"
     gene            complement(981..1949)
                     /locus_tag="QGG16_04960"
     CDS             complement(981..1949)
                     /locus_tag="QGG16_04960"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HJP24658.1"
                     /translation="MTRLGYQIPNFTYPGTSEAGIFDLVVAQAKAAEAAGFDRVFVMD
                     HFYQLPGIGNPEEPMLECYSILSALAQHTKTVRLSALVTGNTYRHPTLLSKAVTALDH
                     VSSGRATLGIGAGWFQLEHDSLGFEFGTFTDRFEKLEEALQIVIPMLRGETVSLAGKH
                     YQVSEAVNSPRPVSRIPVMIGGSGEKKTLRMVAQYADESNLATGPVSDIPHKLEVLEE
                     HCDRLGRDRSEIVVTKLQMVCVAPTMEEAESDLREIGAAKGWSDEVIEMAKMILIYGD
                     SDTVGEKLQACMDTGIDGMTICLPANGHKIERIGLLGEIGLAATAS"
     gene            2109..2633
                     /locus_tag="QGG16_04965"
     CDS             2109..2633
                     /locus_tag="QGG16_04965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24659.1"
                     /translation="MKWSWRRRENLVDGEWRWSFARRQLIYDVVEPERVYLERWRFDT
                     PFGSIFLHSINLPDRDPYPHTHPFSWSRSLIVKGSYIEERGPYGDDVRRYRPGQVNRI
                     DADTIHRIVSTLGDRPVWTIFAAGKPHGRGWGFVIDGNYQDHKEYLEERASQRAPADV
                     PPRPAITDLHGAST"
     gene            2630..3556
                     /locus_tag="QGG16_04970"
     CDS             2630..3556
                     /locus_tag="QGG16_04970"
                     /inference="COORDINATES: protein motif:HMM:NF013335.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HJP24660.1"
                     /translation="MTDRSLVIDTDTASDDAVAIVLAARDPEVEIRMVTVVAGNVPLD
                     LAVRNAIVTLDLVDHCSVPVHVGADRPLRRPLETAQSVHGEDGMGGADLPAPSRGPSA
                     EDAVEALLRVAADEPDRHGLVTLGPLTNIAMALNENPDLLTRFTHTYLMAGSPDGVGN
                     MNALGEYNVWADPEAASIVFDANGAKTMIGWNISRTYAVMAPQESARLRSCGRLGEFA
                     VDINSEVDRFCRGRGLVGMDLPDPVAMAVALDESIVTESTEERLIVGLDEPTRGAALP
                     DRRFLADLPNLRVVWQVDEAAFKDRLYAACSD"
     gene            complement(3568..3759)
                     /locus_tag="QGG16_04975"
     CDS             complement(3568..3759)
                     /locus_tag="QGG16_04975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24661.1"
                     /translation="METTATRARPEDLARSVAALADALAYGWVTLTEAVAAATLEVGG
                     DPDRVDRILDCFEMPSLAG"
     gene            complement(3826..5211)
                     /gene="cysS"
                     /locus_tag="QGG16_04980"
     CDS             complement(3826..5211)
                     /gene="cysS"
                     /locus_tag="QGG16_04980"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: protein motif:HMM:TIGR00435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HJP24662.1"
                     /translation="MLRFTDSLTGEKVDFVPREEGKASVYWCGPTVYDVPHLGHARST
                     LAFDLLVRYLRWTGLDVTAVSNITDIDDKIINRAADEDSTEPEVARRYEVTFIEQMDR
                     LNVAHPDLRPRATEYVDRMVEVIGELVEREMAYTTDSGVYFDVDRLGEYGALVGRSVD
                     DLREGAGARVDVDDDKADPLDFALWKAAKPGEPTWDSPWGPGRPGWHIECVAMSLHLL
                     GDSFDIHGGGDDLVFPHHENERAEALGCGRPFARYWVHNGMVQVDGEKMSKSLGNFTT
                     LAGLLDTWDPRALRLLVLQTHYRRTMEIGSTTLDQSAAALARLDQFSDRMANADLPEV
                     GPDADVVARFRAAMDDDLGSPQALAVIFDAVRDANRALDAEDDNAAAALSTAALELAG
                     VLGLVLGRAAPTDASGNSDDDAEIDALVDRRLDAKAKKNFGEADRIRDELTARGVVLE
                     DTPRGTAWRRG"
     gene            complement(5307..6512)
                     /gene="cysS"
                     /locus_tag="QGG16_04985"
     CDS             complement(5307..6512)
                     /gene="cysS"
                     /locus_tag="QGG16_04985"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HJP24663.1"
                     /translation="MGMRLHDTARGEVVPFEPGPRVTMYVCGITPYDATHLGHAFTYL
                     TFDLVVRRLEDLGHEVRMVRNVTDVDDSILPKARELGIDYLELAAREMGHFRADLAAL
                     NLRPATSEPTATGSIDAMLDLIGRLEANGHTYTVEGTTFFDVSTWDSFGSMTGYDEAT
                     MRAFAAERGGNPDDPRLRNPLDFVLWQASADDEPSWDSPFGPGRPGWHIECSAMAMAD
                     LGETIDLHGGGNDLTFPHHECEAAQSEAATGQPFARHWMHVGMVAYEGTKMSKSLGNL
                     VFVRNLRHIHDPRAIRLALMAHHYRAGFEWFDCDIDDAIIRLDRLVTAARRPKGPNPA
                     PTLAAVRAALDDDLDAATGCEALDILAGGILSGTGDDPTAAAGLATAAALLGIHLDAT
                     LPESWSRTT"
BASE COUNT         1213 a         2058 c         2161 g         1217 t
ORIGIN      
        1 tctccggcgt gccccaaacc gaagacctgg tcgacgacgg gtggaccgat ctgatcggca
       61 tgatgatccg ccgcttccgc gacgcccaag ccgacggcag cgccgacatt gccgagatcc
      121 tcgagatggc caacttcgac aagatgaacg aaatacgatc ccgggtcgac ggcctcgtcg
      181 actccccgga aatcgctgag aaactcaagc cctactaccg gatgttttgc aaacgcccca
      241 cgttcaacga cgagtacttg ccggcgttca accgacccaa cgtggaactc gtcgacaccg
      301 ccgggaaagg cgtcgaccgg atcaccgaac acggcctggt ggtcgacgga gtcgaatacg
      361 aagtcgactg catcatcttc gccaccggct ttgaagtggg aacctcctac gcccgccggg
      421 ccggctacga aatcgtcgga agccgcggcc agaccctgtc cgaaaaatgg gccaccggca
      481 tgtcgacact gcacggcatg cagagccgcg ggttcccgaa ctgcttcttc atgcagatca
      541 gccaagccgc gttcaccgcg aacttcccgc acctcctcga cgaactcacc acccacctgg
      601 cccacatcat cggccacgcc ctccaacagg gagcggccac cgtcgaagtg tccgaacaag
      661 gcgaagaagc atgggtagcc accatcgtcg aaaaaggcct cggcgccatg ggaacgctcg
      721 gcggcgcgga ctgcaccccc ggctactaca acaacgaagg gcaagcccgc gaaccaagcg
      781 ccatccaggc cgcgccctac gggggcggat ccatcgagtt tttccaactc ctcgaagggt
      841 ggcgggccga cgggaacttc gacgggttgg agttcaccga ctgacccccg gcggaacatc
      901 cgccgaaaaa cccggaccgc aggacgagtg ggctaaccga ctgtccgagt gggtcgacag
      961 gtttcaaccg atcccaatgg tcaactcgcc gttgctgcca atccgatttc gccgaggagg
     1021 ccaatgcgct cgatcttgtg cccattggcc gggaggcaga tggtcatccc gtcgatgccg
     1081 gtgtccatgc acgcctggag tttttctccg acggtgtcgg aatctccgta gatcaggatc
     1141 atcttggcca tctcgatgac ctcgtcggac caccctttcg ctgctccaat ctcacgtaag
     1201 tccgattccg cctcttccat ggttggggca acacaaacca tctgcagttt ggtgaccacg
     1261 atctcagatc tgtcgcgtcc caggcggtcg cagtgttcct ctagtacttc aagcttgtga
     1321 ggaatgtcgc tgactgggcc ggtcgcgagg ttggactcgt cggcgtactg ggcaaccatt
     1381 cggagtgtct tcttctcacc gctgccaccg atcatgaccg ggatacggga aacaggccgc
     1441 ggagagttga ctgcctcaga aacctggtag tgctttcccg caaggctcac tgtttccccg
     1501 cgaagcattg ggatcacgat ctgcaatgcc tcttcgagct tttcgaaccg gtcggtgaac
     1561 gtgccgaact caaagccgag ggagtcgtgt tcgagttgga accaaccggc accgatcccc
     1621 agagttgccc tgcccgatga aacgtgatca agagcggtta ccgccttaga caaaagggtg
     1681 ggatgccggt aggtgttgcc agtcaccaac gccgagagac ggactgtctt cgtgtgctgg
     1741 gcgagtgctg acaggatcga gtagcactca agcatcggtt cttccgggtt tccaattccc
     1801 ggaagttggt agaagtggtc catgacgaag accctgtcaa acccggcagc ttctgccgcc
     1861 ttggcttggg ctacgactaa atcgaaaatg cctgcttccg aagtacctgg gtaggtgaag
     1921 ttcggaatct gatagccgag acgggtcatg gatgggtctt tcgggtcgct tcaattgttg
     1981 gcggtggatc attcaactat ccctctgggc atcagtagcc atcagggcag gcgtgacttg
     2041 atgttcgggg agggctcgac cctccaacct tctgatccgt aggaagagat tcggtaccct
     2101 gagccgtaat gaaatggagt tggcgtcgta gagaaaatct ggtcgatggc gaatggcgat
     2161 ggtcgtttgc ccgacgacaa ctcatctacg acgttgtcga accggagcgg gtttatctgg
     2221 agcggtggcg attcgacaca ccgttcggtt cgatcttcct gcattccatc aatcttcccg
     2281 accgcgaccc ctacccccat acccatccgt tctcgtggtc acgcagcctt atcgtgaagg
     2341 gcagttacat cgaagaacgc ggtccttatg gcgacgacgt acgcaggtac cgcccagggc
     2401 aggtcaaccg aattgacgcg gacaccatcc accgcatcgt cagcaccttg ggcgaccgtc
     2461 cggtatggac gatcttcgct gccggcaagc cacacggccg cggctggggc ttcgtcatcg
     2521 acgggaacta ccaggaccac aaggagtatc tcgaggaacg cgcgtcgcaa cgggctccgg
     2581 ccgacgtgcc accgaggcca gccatcaccg acctccatgg agccagcacg tgacggaccg
     2641 gagccttgtc atcgacactg acaccgcctc cgacgatgct gtagccatcg tgctcgcggc
     2701 acgcgatcca gaggtggaaa tccgcatggt cacggtcgtt gccggcaacg tcccgctgga
     2761 tctggctgta agaaacgcaa ttgtcaccct tgacctcgtt gaccactgct cggtaccagt
     2821 tcatgtagga gctgatcggc ccctgcgacg gccgctggaa acggcacagt cggtacacgg
     2881 tgaagacggg atgggaggcg cagacttgcc cgccccttcc cgcgggccta gcgccgagga
     2941 tgccgtcgaa gcgctgcttc gggtagccgc ggacgaaccc gaccggcacg gcttggtaac
     3001 actcggacca ctcaccaaca tcgccatggc cctcaacgag aatcccgacc tactcactcg
     3061 cttcacccac acctacctga tggctggctc tcctgacggt gtgggcaata tgaacgccct
     3121 cggcgagtac aacgtgtggg ctgatccgga agcggcttcc attgtgttcg acgccaatgg
     3181 ggccaagacc atgattggct ggaatatcag ccgcacctac gcggtcatgg cacctcagga
     3241 gtcggctcga ctccggtcgt gtggccggct cggcgagttc gcggtggaca tcaattcaga
     3301 ggtcgaccgg ttctgtcgcg gcagaggtct ggttggtatg gatttaccgg acccggtcgc
     3361 tatggccgtc gccctcgacg agtcgatcgt cacagaatcc acagaagaac gacttatcgt
     3421 cgggctcgat gagcccaccc gtggcgcggc tctccccgat cgccggttcc tggctgatct
     3481 gcccaatctc cgggtggtct ggcaagtcga cgaagccgcc ttcaaggacc gcctctacgc
     3541 tgcctgctcc gactgacgaa tcgtgggtca gcctgctagc gacggcatct cgaagcagtc
     3601 cagaatccgg tcgacccgat cagggtcgcc accgacttcc agcgtcgctg cggccacggc
     3661 ctcagtgagg gtcacccagc cataggccag ggcgtcagcg agggcggcga cggatcgggc
     3721 caggtcctca ggcctcgcac gcgtggccgt cgtctccata ggcccgtcag gacgatggag
     3781 tgtgccagag cttccagaga acagtgcctt gggagaacaa gtccctcagc cccgtcgcca
     3841 ggcggtgccg cgtggcgtgt cctcgagcac cacgccgcgg gccgtcaact cgtcgcgtat
     3901 ccgatcggct tctccgaagt tcttcttcgc cttggcgtca aggcggcgat cgaccagggc
     3961 gtcgatctcg gcgtcgtcgt cggagttgcc actggcatcg gtaggagcgg ctcgccccag
     4021 cactaggccg agaacgccag ccagttccag ggcggcggtc gataacgcag cagcggcatt
     4081 gtcgtcctcg gcgtccaacg cccggttggc gtcacggacg gcgtcgaaga tcacggccag
     4141 ggcctgtggt gagccgagat catcgtccat ggcggcccgg aaccgagcca ctacgtcggc
     4201 gtcgggtccg acctcgggta ggtcggcgtt ggccatccga tcggagaact ggtcgaggcg
     4261 ggccagtgcg gcggccgact ggtcgagtgt ggtcgatccg atctccatgg tccgtcggta
     4321 gtgcgtctgg agcaccagca gacgtaacgc ccttgggtcc cacgtgtcga gcaggccggc
     4381 cagcgtggtg aagttaccca gcgacttgga catcttctcg ccgtcgacct ggaccatccc
     4441 gttgtggacc cagtagcggg cgaagggccg gccacagccc agtgcctcgg cccgttcatt
     4501 ctcgtggtgg gggaagacga ggtcatcgcc gccgccgtgg atgtcaaaac tgtcacccag
     4561 gaggtgcagc gacatggcca cgcactcgat gtgccagccg gggcgacccg gaccccacgg
     4621 cgagtcccag gtgggttcgc cgggcttggc ggccttccag agggcgaagt ccagcgggtc
     4681 ggccttgtcg tcgtcgacgt cgacccgggc gcctgcaccc tcgcggaggt cgtcgaccga
     4741 gcggcccacc aaagcgccgt actcgccgag tcgatcgacg tcgaaataga cgcccgaatc
     4801 ggtggtgtag gccatctccc gttcgaccaa ctctccaatc acttcgacca tgcggtcgac
     4861 gtactcggtg gcccggggtc gtagatcggg gtgggcgacg ttgaggcgat ccatctgctc
     4921 aatgaaggtg acctcgtagc ggcgggccac ctcgggttcg gtcgagtcct catcggccgc
     4981 ccggttgatg atcttgtcgt cgatgtcggt gatgttggac actgctgtga cgtccagtcc
     5041 cgtccagcgc agatagcgga cgagcaggtc gaaggccagc gtgctgcggg cgtgcccgag
     5101 atgggggacg tcgtagacgg tgggcccgca ccagtagacg gatgcctttc cctcttcgcg
     5161 tgggacgaag tcgacttttt cgccagtcag gctgtcagtg aatcgcagca ccggatcagg
     5221 atacggtccg ctcgccaccg gcccgcctgt gatgaccagc ccgactcagg tctggggtgg
     5281 ttcggttacc gagggtggac cgggaatcac gtagttcgtg accaggattc gggaagggtg
     5341 gcgtcgaggt ggatgcccag tagggctgct gcggtggcca gaccggcggc ggctgttggg
     5401 tcgtcgccgg tgcccgagag gatccccccg gccagtatgt ctagggcttc gcagccggtg
     5461 gccgcgtcga ggtcgtcgtc gagtgcagcc cgcacggcag ccagcgtggg tgccgggttc
     5521 ggacccttgg ggcgtcgggc tgcggtgacg aggcggtcga ggcggatgat cgcgtcgtcg
     5581 atgtcgcagt cgaaccattc gaagccggcc cggtagtgat gggccatgag ggctaggcgg
     5641 atggcccttg ggtcgtggat gtgtctcagg ttgcgtacga agacgaggtt gcccagcgac
     5701 tttgacatct tcgtgccctc gtaggcgacc atcccgacgt gcatccagtg gcgggcgaac
     5761 ggttggccgg tggctgcttc gctctgggcg gcttcgcact cgtggtgggg gaaggtcagg
     5821 tcgttacctc cgccgtggag gtcgatggtc tcaccgaggt cggccatggc catggccgag
     5881 cactcgatgt gccagcccgg tcgccccggg ccgaagggcg agtcccacga gggttcgtcg
     5941 tcggcgctgg cctgccagag tacgaaatcc agggggttgc gcaggcgggg gtcgtcgggg
     6001 ttgccgcccc gttcggcggc gaacgcccgc atggtggctt cgtcgtagcc ggtcatcgaa
     6061 ccgaaggagt cccacgtgga gacgtcgaag aaggtcgtgc cctcgacggt gtaggtgtgg
     6121 ccgttggctt cgaggcggcc gatgaggtcg agcatggcgt cgatcgaacc ggtggccgtg
     6181 ggttcagacg tggcgggtcg caggtttagc gcggccaggt cggcgcgaaa gtggcccatc
     6241 tcccgggcgg ccaactcgag atagtcgatg ccgagctcgc gggccttggg gagaattgag
     6301 tcgtcgacgt cggtgacgtt gcgaaccatg cggacctcgt gacccaggtc ttccagtcga
     6361 cggacgacga gatcgaacgt caggtaggtg aaggcgtgtc cgaggtgggt ggcgtcgtac
     6421 ggcgtgatgc cacagacgta catggtcacc ctggggccgg gttcgaaggg gacgacctcg
     6481 cctctagcgg tgtcatgcag gcgcattccc atggccggcg acggtagtgg tcgtgggagg
     6541 ccgatgcggg acccaccggg agaaacggac cagtgaaccc ctgggtcaat cccgctcgaa
     6601 cgggacagag tgttcccagt cggccagcag ggtgcgaagg gcggtgacc
//
LOCUS       DASCMR010000206         3471 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001016913, whole genome shotgun sequence.
ACCESSION   DASCMR010000206 DASCMR010000000
VERSION     DASCMR010000206.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3471)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3471)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3471
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001016913"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(27..374)
                     /locus_tag="QGG16_04990"
     CDS             complement(27..374)
                     /locus_tag="QGG16_04990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24664.1"
                     /translation="MGITSMRSQAGSSLILPFVLMHGVVLVIIAFGGDALGDSSVQLA
                     VAAIAVIGSMWTTLNFDGVFADFAALRKDMPDGVASSNFGAALQKLPIGPMRAMGIVF
                     SALIVVAELLAIY"
     regulatory      566..691
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01725"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM-I-IV-variant riboswitch; SAM riboswitches
                     modulate the expression of downstream genes in response to
                     levels of S-adenosylmethionine; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF01725"
     gene            781..2097
                     /locus_tag="QGG16_04995"
     CDS             781..2097
                     /locus_tag="QGG16_04995"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional o-acetylhomoserine/o-acetylserine
                     sulfhydrylase"
                     /protein_id="HJP24665.1"
                     /translation="MSAEWGFETKQIHAGQDPDPATGSRAVPIYQTTSYVFRDSQHAA
                     DLFALAEVGNIYTRIMNPTQMVLEARLQSLEGGTDTAIGIPGALALASGQAAETIAIL
                     NLAESGDHIVSSASLYGGTYNLFHYTLPKLGIETTFIDDPDDLDAWRAAIRPNTKAFY
                     GETIGNPRNDCLDIRGISELGHEAGIPLVVDNTVSTPFLFNPLALGADIVVHSLTKFI
                     GGHGNSVGGVIVDGGTFDYGASGRFPNFTEPDPSYHGLAYWPALGNGAYIIKARVQLL
                     RDIGAAVSPQNAFYFLQGLETLSYRMERHFANAQAVAEYLDSHDQVERVQYAGLSSSP
                     WHDRLTEYGSGRGYGSVPAFIIEGGHESGARFVDALQLHSHVANIGDVRSLAIHPTST
                     THSQLTKEEQSATGVEPGLVRLSVGLETLDDIIADLEVGFAAARTR"
     gene            complement(2330..2920)
                     /locus_tag="QGG16_05000"
     CDS             complement(2330..2920)
                     /locus_tag="QGG16_05000"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012521.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HJP24666.1"
                     /translation="MELLVIRHALPEAEVRSDGPADPPLSALGIQQAEATAEFLADET
                     VDAIVTSTMRRAIQTGQPLADRLGLTLKRLDGLKESDHRRSSYTPAEDMDADHEVIRE
                     FMEDPHRMFSDGYEPFRDRVQKTFDEIVASQRGRTVAVFCHSMVASVYIQTLLGHDDP
                     FALISDYCGISRISASSTGVRTLRSVNETAHLRHLV"
     gene            complement(3032..>3471)
                     /locus_tag="QGG16_05005"
     CDS             complement(3032..>3471)
                     /locus_tag="QGG16_05005"
                     /inference="COORDINATES: protein motif:HMM:NF042769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24667.1"
                     /translation="DDVIVIGHSAGGHLALWAGSRDRLSSGDPGASPAITPHTVVAQA
                     AVVDLRLAAEVNLGSGAVQALLGGEPDEVSDHYRVAQPVFDGPRIIVVHGRYDQTVPI
                     SQSSLIPEATGIFSDTGTHFDVLDPGHELWLRTLAELGLSNPN"
BASE COUNT          680 a         1058 c         1059 g          674 t
ORIGIN      
        1 ccctttggtt tcaaggcgaa ggccgtttag tagatggcca ggagttcggc tacgacgatg
       61 agcgccgaaa atacgatgcc cattgcccgc atgggaccga tgggcaactt ctgtagggcg
      121 gctccgaagt tggaggaggc cacgccgtcg ggcatgtcct tcctaagcgc ggcaaagtcg
      181 gcgaacaccc cgtcgaagtt caacgttgtc cacatcgacc cgatcaccgc gatggctgcc
      241 accgccagtt gaacgctcga gtcacccagc gcatccccgc cgaaggcgat gatgaccagc
      301 accacgccgt gcatcagcac gaacgggagg atcagggaac tgcccgcctg tgacctcatt
      361 gaggtgatcc ccacccacgt cgactcctgc atgtcactac ccccgtgctc gcttccgccg
      421 agcctgtcgg cccgcctctg acgacagtat cgcccaggca gccctcgatg ccggaagttg
      481 cacggcgggc gggacatcgc cctctattcg gtgattgata gttccatctg agtgttgtca
      541 aagcttgtca aggttgattc actggtttcc acatcaagag cggtacgcct tcgggtgtgc
      601 ccagcaacct gggatggaca cccaaggtgc tgtccgcttc gtgcggagat gcggtcccga
      661 ctagatattc ggggcaacta agtgtctgaa ctgtcgatgc cgcgaggctt cgaacgttca
      721 tcgccggcga tcagggtgtc ctcccgcaac tagagccctg cggggccggg aggaaatcca
      781 atgagcgccg aatggggctt tgaaacgaaa cagatccatg ccgggcagga ccctgatccg
      841 gcaaccggta gtcgggccgt gcccatctat cagacaacct catacgtctt ccgtgacagc
      901 caacacgccg cggacctctt cgcgctagcc gaggttggca acatctacac ccggatcatg
      961 aatccgacac agatggtgct tgaggctcgc ctccagtcac tagagggagg aacggataca
     1021 gcgattggga tcccaggagc cttggcgctt gcttcgggtc aggccgcgga gacaatcgcg
     1081 atcttgaacc ttgctgagtc aggcgaccac atcgtttcat cggcttcgct ctacgggggg
     1141 acctacaacc tgttccacta cacccttccc aagttgggga ttgagacgac cttcatcgac
     1201 gatcctgacg accttgatgc gtggagggcg gcaatccggc cgaataccaa agccttttac
     1261 ggcgagacga ttgggaatcc gagaaacgac tgcctcgaca tcagagggat ttcagagttg
     1321 ggtcacgagg cgggcattcc cctcgtggtc gataacaccg tttcaacccc gttcctgttc
     1381 aacccactag ccctaggggc ggacattgtc gtgcactcct tgaccaagtt cattggaggt
     1441 cacggcaact cggtcggtgg cgtaatcgtg gacggcggga ccttcgacta tggggccagc
     1501 ggccggtttc ccaacttcac cgaacctgat cccagttacc acgggcttgc ctactggccg
     1561 gccctcggga acggggcgta catcatcaag gcccgcgtac aactgctccg tgacattggt
     1621 gcggcggttt ctccgcagaa cgccttctac ttcctccaag gactcgaaac gctgagttac
     1681 cggatggaac ggcactttgc gaacgcccag gcggttgccg agtacctcga ctcccacgac
     1741 caagtcgaac gagtccaata tgccggactg tcgagtagtc cgtggcatga ccgactaacc
     1801 gagtacggca gcggccgagg ttacggctct gtcccggcat tcatcatcga gggaggacat
     1861 gagtccgggg ctcgcttcgt tgacgccctc cagttgcaca gccacgtcgc caatatcggc
     1921 gatgtgcgca gcttggctat ccacccgacg tcgactaccc actcacagct cactaaagag
     1981 gagcagtcag cgactggagt tgagccggga ctggttcgac tctcagttgg gttggagact
     2041 ctcgatgaca tcattgccga cctggaggtg gggtttgccg cggcgcgaac ccgctaatgg
     2101 aaccagattc tgattggggc cggtcactcc cggatgtgct ccactcacag gaagcgatct
     2161 aggcgacaca gtgctatagc tgccaatacc tcagcggaaa tccttacgca gccgccatcg
     2221 gcggctgcgt aaggccgcgg agggtaccgc agaggacggg tttgccagat ggtgcttgct
     2281 cagaccggcc cgatcgaccc cgggcctcag cgctgcttcg gtgcgatcct cagaccaggt
     2341 gccggagatg ggcggtctcg ttgacacttc gcaacgtccg gaccccggta gacgaggcgc
     2401 taattctaga gatcccgcag tagtcactga tcagagcgaa cgggtcgtcg tggccgagca
     2461 gcgtctggat gtagacgctg gccaccatgc tgtggcagaa cacggccacc gtgcgacccc
     2521 tttgggaggc cacgatctcg tcaaacgtct tctggacccg gtcgcggaag ggctcgtagc
     2581 cgtcggagaa catgcggtgc gggtcctcca tgaactcgcg gatcacctcg tggtcggcgt
     2641 ccatgtcctc ggccggcgtg tagctggagc gacggtgatc ggattccttg aggccgtcga
     2701 gccgtttcag ggttaggccg agtcggtcgg cgaggggctg gccggtctgg atggcccgac
     2761 gcatagtgct ggtcacaatg gcatcgaccg tctcgtcggc caggaactcg gcggtcgcct
     2821 cagcctgttg tataccgagc gccgacaatg gtggatcggc ggggccgtcg gaccgaacct
     2881 cggcctcggg aagcgcgtgc ctgatgacga ggagttccac gatcccggaa cctacgggcc
     2941 gatgcctttc tggccgttag tgggcttgcg atgtcaggaa ctccccacgt ccaacccttg
     3001 ctgtccgctg tccttgttcg agttgttgag gtcagttcgg gttgctgagg ccgagttcag
     3061 ccagtgtccg gagccagagt tcgtgtcctg ggtccaatac atcaaagtgg gtgccggtgt
     3121 cagagaagat cccggttgct tcgggaatca gcgaactctg actgatgggc acggtctggt
     3181 catagcgccc atgaacgacg atgatccgtg ggccgtcaaa gactggttgg gcgaccctgt
     3241 agtgatcgga aacctcatcg ggctcaccgc ctagcaatgc ttgcactgcg cccgatccaa
     3301 ggttcacttc agcggctaaa cgcaggtcaa caactgcggc ctgagcaacg acggtgtgtg
     3361 gtgtgatggc cggactcgca cctgggtcgc cagaagacag ccggtcccga ctccccgccc
     3421 agagcgcaag gtgaccacca gccgagtgcc cgatcacgat cacatcgtcg a
//
LOCUS       DASCMR010000207         1701 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001017232, whole genome shotgun sequence.
ACCESSION   DASCMR010000207 DASCMR010000000
VERSION     DASCMR010000207.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1701)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1701)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1701
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001017232"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..601
                     /locus_tag="QGG16_05010"
     CDS             <1..601
                     /locus_tag="QGG16_05010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24668.1"
                     /translation="YASLIDTIRHAGWDTDGAFSMRFDARECKASYTWAYGTIAEALD
                     DLDLVYADIATGFELLDRHAGTTHTQVADGSPADVVIDLYDSNSSFVSQFTLAQTVAN
                     GSYSGTGHLVDTYVGPELRWNPGYHVQLDVPWLWLTGAHRNPVAVVLHELVHTFGVGH
                     VDDWNSLMFPGALMFDPTQLIASDQAVIDLHTTAICGAR"
     gene            complement(635..1360)
                     /locus_tag="QGG16_05015"
     CDS             complement(635..1360)
                     /locus_tag="QGG16_05015"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF012630.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031012 - extracellular matrix [Evidence
                     IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="matrixin family metalloprotease"
                     /protein_id="HJP24669.1"
                     /translation="MQKCRRNPYRNAALFAAVSAAVVAVVLVSVLVVAAAGMASPLGF
                     GTRESNATMTASPGAASVVFFEAAWHGCAAVPVTYSYDQGLTDLEVAAVEGSLARATE
                     GLRALTGMQFGLQRVQTSRDAAPGTIHVNWSDDNALFAGDEVGFTVLYFVEAQITRAE
                     VTISLGLLDRYEVGNVYDRGESVTAVVLHELGHAVGLGHSVEVDSLMHAHHGTGTHVT
                     PTDRSGFRQAGRADQDECRSLNF"
BASE COUNT          308 a          588 c          507 g          298 t
ORIGIN      
        1 ctacgcctca ctcatcgaca ccatccgcca cgccggctgg gacacggatg gcgcgttctc
       61 gatgcgtttc gacgcccggg aatgcaaggc ctcgtacacg tgggcctacg gcaccatcgc
      121 cgaggccctc gacgacctcg accttgtcta cgccgacatc gccaccgggt tcgagctcct
      181 cgaccgccac gccggcacca cccacaccca ggtcgccgac ggctcccccg ccgacgtagt
      241 catcgacctc tacgacagca acagctcctt cgtctcgcag ttcaccctcg cccagacggt
      301 ggccaacggc tcgtactccg gcaccggcca cctcgtcgac acctacgtcg gaccggagct
      361 gcggtggaac cccggctacc acgtccagtt agacgtcccc tggctctggc taacgggtgc
      421 ccaccgcaac cccgtcgcag tcgtgctcca cgaactcgtc cacaccttcg gggtcggcca
      481 cgtcgacgac tggaacagcc tcatgttccc cggggccttg atgttcgacc ccacccagct
      541 catcgcctcc gaccaggccg tcatcgacct gcacaccaca gcgatctgcg gcgcccggta
      601 gggcccggac aggaaacttt tacggagtag ccggtcagaa gttcaacgac ctgcactcgt
      661 cctggtcggc tcggccggcc tgtctgaagc ccgacctgtc cgtcggggtg acgtgcgtgc
      721 cggtgccgtg gtgggcgtgc atcaacgaat cgacctcgac gctgtgtccc agccccacgg
      781 catgtccgag ctcatgcagg accactgctg ttacggactc gcctctgtcg tagacgttgc
      841 cgacctcgta cctatcgagc agccccaggg agatggtcac ctccgcccgg gtgatctgag
      901 cctctacgaa gtacaggacc gtgaagccga cctcatcgcc agcgaacagg gcgttgtcgt
      961 cgctccagtt gacatggata gtgcctgggg cagcgtcgcg gctggtctgc actcgctgga
     1021 ggccgaactg catgcctgtc aacgcacgta gaccttcggt ggccctggcc agggaacctt
     1081 ccaccgctgc tacctcgagg tccgtgaggc cctggtcgta ggagtacgtg accggaactg
     1141 ctgcacagcc atgccatgcc gcctcaaaga agacaacgga agctgcacca ggcgaagcgg
     1201 tcatggttgc gttgctttca cgagtgccga acccgagagg agaggccatc cctgcggcgg
     1261 ccaccaccag gacggacacc aggacgacgg ccacgacggc cgctgaaacg gcggcgaaca
     1321 aggcggcatt tcggtacggg ttcctgcggc acttctgcat gccctaaccc tgctgagcag
     1381 gccattcggc gtcgccagca ccgatgcgtg ttcaccgctc ccccatttgc aggggtccac
     1441 cacacaaaca aagcaccaga aacttttacg gagtagggac gtcgcctcga aaatgcctcc
     1501 aggaccaccc tgagggagtg ttttggcact tcggacaggg gtgtgtgcct ctggtttgcc
     1561 ctcagggcca ccctgagagg gggttttagg ccttcgaggg ggtttggcta caccaactgc
     1621 tttgcggggg tgcgtggcat aaaacgcgcg ttcagggtgg tagccatctg gcgggatggc
     1681 aggtgttcag ccgtggtaga c
//
LOCUS       DASCMR010000208         2875 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001028962, whole genome shotgun sequence.
ACCESSION   DASCMR010000208 DASCMR010000000
VERSION     DASCMR010000208.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2875)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2875)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2875
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001028962"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            21..1223
                     /locus_tag="QGG16_05020"
     CDS             21..1223
                     /locus_tag="QGG16_05020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-transfer protein"
                     /protein_id="HJP24670.1"
                     /translation="MPEGAMEEVAVLGVGMHPWGKWGRNFTEYGVHAARAALADADVD
                     WNDVGFVSGAITVRCGYPGYVSGSTFARALGFNGAQVASSYAACASGVTALSVARGQI
                     LSGACDVAVVVGADTTPKGFLAPTSGDRPDDTDWLRFHMVGATNPVYFALHARRRMAL
                     YGATPEDFAMVKAKNSRHAVHNPNARYPKEYDVDDVANSPVVSDPLRLLEICATSDGG
                     AALVVCSMDYARSKGVTDPVRVAGLSTVTPTYPDTVIDLPYLATDSAAAVEPPALGFK
                     DSIGAQVYAEAGMGPADVDVAEVYDLSSALELDWYEQLGLCAEGEAEALLRTGETSIG
                     GRIPVNPSGGLGAFGEAVPAQAIAQVCELTWQLRGQAGGRQVDGARVGVSANQGLFGH
                     GSSVLVRR"
     gene            1269..2042
                     /locus_tag="QGG16_05025"
     CDS             1269..2042
                     /locus_tag="QGG16_05025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase family protein"
                     /protein_id="HJP24671.1"
                     /translation="MALHETVTDGVATITMDNPPVNALGIADTYGLAALLDGYGKRND
                     VRAVVLTAEGRGFCAGVDIKEIQAMDTDGGHLGLVEANRSCAEAFRAVYECAIPVVAA
                     VNGFCLGTGIGLVGNADVIVAAEGVGFGLPEVDNGALGAATHLMRLVPAHRARWMLYS
                     CEPASAEELHGYGSVLRVVPADDLAASAVEVAATIASKDGSVIRAAKASMNGIDPVDV
                     RTSYRFEQGFTFELNLLGRGDEARAAFLRGERDPNAAAD"
     gene            2072..>2875
                     /locus_tag="QGG16_05030"
     CDS             2072..>2875
                     /locus_tag="QGG16_05030"
                     /inference="COORDINATES: protein motif:HMM:NF024214.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NTP transferase domain-containing protein"
                     /protein_id="HJP24672.1"
                     /translation="MTTEPVISLLLLAGGLGSRFGGTKQLAPVGPQGSAILDHSIREA
                     ALAGVTRVVVIGRTDLDRDIRRHLMAQHGDDLDLVMVHQDAFGPARAKPWGTGHAVVS
                     AHAVLDGPVVVLNADDHYGPTGIARIVAAVAEPVGQMPVAAMLGFRLGQTLPATGTVS
                     RGVCRRDSDGRLAGLVETHGIGRDNNGAQGEVIRAADPPGELSPETPVSMNIWALPLA
                     AIEALREQWMAFHDEHRYSETSEFLLPEALDEQRAVGRLSIQVLDTDEDW"
BASE COUNT          477 a          870 c         1013 g          515 t
ORIGIN      
        1 gctgacaagg gggcttgacc atgccggagg gagccatgga ggaggtcgcc gtcctgggtg
       61 tcggaatgca cccgtggggg aagtggggcc gcaatttcac cgagtacggg gtccatgccg
      121 cacgggcggc cctggctgat gccgacgtcg actggaacga cgtgggcttc gtgtcgggag
      181 ccatcacggt ccgctgtggg tatccgggct acgtgtccgg ttcgacgttc gcccgggcgc
      241 tgggcttcaa cggcgcgcag gtggcgagca gttacgcggc gtgcgcctcg ggggtcaccg
      301 ctctgtcggt ggcccgtggc cagattctct ccggagcgtg tgacgtggcg gtcgtggtgg
      361 gggccgacac cacccccaaa ggtttcctgg cgccgacgag tggcgaccgg cccgacgaca
      421 cggactggtt gcggttccac atggtcgggg caaccaaccc ggtgtacttc gccctccacg
      481 cccggcgccg tatggccctc tacggtgcta cgccggaaga tttcgccatg gtgaaggcca
      541 agaacagccg ccacgccgtc cataatccga acgcccggta ccccaaggag tacgacgtgg
      601 acgatgtcgc caactccccg gtggtgtctg atccgctacg actgctggag atctgtgcga
      661 caagcgacgg gggagcggcc ttggtggtct gctctatgga ttacgcccga tccaagggcg
      721 tcaccgaccc ggtacgggtg gccggccttt cgacggtcac gcccacctac cccgacaccg
      781 tcatcgatct tccgtacctg gccacggatt ctgcggccgc cgtggagcca ccggcgctgg
      841 gcttcaagga ttccatcgga gcgcaggtgt acgccgaggc cgggatgggc cccgccgacg
      901 tcgatgtggc agaggtgtac gacctctcgt cggctctgga acttgactgg tacgagcagt
      961 tgggcctgtg tgctgagggc gaggccgagg cgctcctgag gactggtgag acatccattg
     1021 gtggtcgaat ccctgtcaat cccagcggtg ggctcggagc tttcggagag gcggtgccag
     1081 cgcaggccat tgcccaggtc tgtgagctca cctggcagct ccgaggacag gctggtggcc
     1141 ggcaggttga cggcgcccga gtaggagtga gcgcgaatca gggactgttc ggccacggat
     1201 cttcggtcct ggtccggcgc tgatttcacc gtgaagtgat gggctgaggg gacgacaggg
     1261 gagagacgat ggcactacac gagacggtca ctgatggtgt ggccaccatc accatggaca
     1321 acccgccggt caatgcgctg ggcatcgccg acacctatgg cctggccgcc ctgctggacg
     1381 gttacggcaa acgcaacgac gttcgagcgg tggtcctgac cgccgagggg cggggcttct
     1441 gcgccggcgt ggatatcaag gagattcagg caatggatac cgatggcggg catctcgggt
     1501 tggtggaggc caaccgatcg tgtgcggagg ccttccgggc ggtctacgaa tgcgccatac
     1561 cggtggtggc ggccgtcaac gggttctgtc tgggaaccgg gatcggtctg gtgggcaacg
     1621 cagacgtgat cgttgcggca gagggggtgg gcttcggcct tcccgaggtg gataacgggg
     1681 cgctgggcgc cgccacccac ctaatgcgtc tcgtgccagc acaccgggcc cgctggatgc
     1741 tctacagctg cgagccggca agcgccgagg aactacacgg ctatggctcg gtcctacggg
     1801 ttgtaccagc tgatgatctt gccgcatcgg ctgtcgaggt ggcggccacc attgcctcta
     1861 aggacgggtc ggtcatccgt gctgctaagg catcgatgaa cggaatcgat ccggtggatg
     1921 tccgaaccag ctatcgcttc gagcagggtt tcaccttcga attgaacctg ctgggtcggg
     1981 gagatgaggc ccgggcagcc tttctgcgag gcgaacggga ccccaacgct gccgccgact
     2041 gacccggctc ggacgatgat ggcccgccgt gatgactact gaacccgtga tcagcctgct
     2101 gctcctagct ggcggcctgg gatcgcgttt cgggggcacc aagcagttgg cccccgtggg
     2161 cccgcaggga tcggccattc tcgaccattc cattcgtgag gcggcattgg ctggtgtaac
     2221 gcgggtggtg gtgatcggac ggaccgacct cgacagggac atccgtaggc acctgatggc
     2281 ccagcatggc gatgatctcg acctggtgat ggtgcatcag gacgccttcg gaccagcgag
     2341 ggccaagccg tgggggaccg gccacgccgt ggtcagcgcc cacgctgtac tcgatggtcc
     2401 ggtggtggtg ctcaacgccg acgaccacta tggccccacc ggcattgccc gaatagtggc
     2461 cgcggttgcc gaaccggtag gacagatgcc tgtcgctgcc atgctcggat ttcgtctcgg
     2521 gcaaaccctg ccggccaccg ggacggtctc gcggggcgtg tgccgtcggg attccgatgg
     2581 ccgtctagcg ggccttgtcg agacccacgg catcggccgc gataacaacg gagctcaggg
     2641 agaggtgatt cgtgccgccg acccgcctgg tgagctgtca ccagagaccc cggtctcgat
     2701 gaacatctgg gcccttcctt tggctgccat cgaggcactg agggaacagt ggatggcctt
     2761 tcatgacgaa caccgctact ccgagacatc cgagttcctg ttacccgagg cgttagatga
     2821 gcagcgagcc gtgggtcggc tgtcgataca ggtgctcgac accgacgagg actgg
//
LOCUS       DASCMR010000209         3735 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001031497, whole genome shotgun sequence.
ACCESSION   DASCMR010000209 DASCMR010000000
VERSION     DASCMR010000209.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3735)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3735)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3735
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001031497"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..264
                     /locus_tag="QGG16_05035"
     CDS             <1..264
                     /locus_tag="QGG16_05035"
                     /inference="COORDINATES: protein motif:HMM:NF036802.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HJP24673.1"
                     /translation="IRVLVDGRKGRLAEPPMVESRGWVEPAVREDWHGQVVSEVTEAL
                     AGPLADGNRDAHELSRLTRRATGQLVSRKTGRKPTLVPIVEVR"
     gene            548..2983
                     /locus_tag="QGG16_05040"
     CDS             548..2983
                     /locus_tag="QGG16_05040"
                     /inference="COORDINATES: protein motif:HMM:NF013727.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015616 - DNA translocase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HJP24674.1"
                     /translation="MARAAFGGRGDEILGLLLVVGGLLTGLSVYLERAGVFGRLLDSG
                     LGWSVGSTRVLLPVAMVGTGLAMFRERSEFGEISRRLPVGLVMAVVSVTGILHIARDR
                     PGLDDGADGLGRAGGLVGVGIGGGLEAVVATWGALLVLIGVGLVAAAVITRTTARQAA
                     RGAAKGVAFTARHATRGMVAGLRPAVRGLRTWLRNLLTPPGGHGPPPVGGMGDRRPPV
                     PVAEPEPVPPVEPAPTTATGPAPERAPAKAKKRKARTKGTDGSEQLTIELGPAIADST
                     WRLPTAGYLSRSETHDVDAKVVEERGLRLQEALAAHGVETRLSEMTVGPTVTRYALQL
                     GEGVKVARITSLHKDIAYALAAADVRILAPIPGQQAIGIEVPNEDRVVVALGDILTSP
                     EAAKARHPLEVGIGRDISGRSVLLNLSTMPHLLIAGATGAGKSSCINSLITSVLMRST
                     PDQVRMILVDPKRVEMGQYEGVPHLLTAPVTDPRKAANALHWAVKEMERRYDLLSDCG
                     FRDIGGYNAAYDRGDLKAPLGLADEDGESVSYQRLPFILVVVDELADLMMVAARDVED
                     SITRLAQMARAVGIHLVVATQRPSVNVITGVIKANIPARLAFAVSSLADSRVILDQPG
                     AERLVGRGDMLLLGPSSSVAQRIQGAWVDENEIRQIVESWVAQARSAAEAATDPVTGA
                     LMDSTGDTATAAAPIDPASVPASPAAKWPAGTSMPPLEDITTDSSRPTATGADSGNDD
                     ELFEEARRLVVTSQLGSTSMLQRKLRVGFARAGRLMDLMEEAGVVGPSIGSKAREVLI
                     APEELTDLQEQGY"
     gene            3061..>3735
                     /locus_tag="QGG16_05045"
     CDS             3061..>3735
                     /locus_tag="QGG16_05045"
                     /inference="COORDINATES: protein motif:HMM:NF013832.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:calcium antiporter"
                     /protein_id="HJP24675.1"
                     /translation="MDVLLAIVVLAGGMKLLMLAADRFVSGASSIAVRLQISPLVIGA
                     VVLGFGTSAPELVVSTVAAGQGQMDLGLGNIVGSNIANLTLVLGIGALIRPIDIPEGT
                     KRRAGVCVAAMLGFALLVQVQGSWWHGPVLVVGVLVAVYLMFVIDTDDLAPPALSPVG
                     STAADWGWTVGSLLVTLVAAQAVVWSATELADQFGLQGGFVGLSIVAFGTSLPELVTV
                     VAAARRN"
BASE COUNT          544 a         1255 c         1302 g          634 t
ORIGIN      
        1 atccgggtgc tggtggacgg tcggaagggt cgcctggccg agccgccgat ggtcgagagt
       61 cggggttggg tggagccagc ggtccgggag gactggcacg gtcaggtggt gagcgaggtg
      121 accgaggcgc tggccgggcc gttggccgac gggaaccggg acgcccacga gttgagtcgt
      181 ctcacccggc gggccactgg acaactggtg tcccggaaga cgggccgcaa gccgacgctc
      241 gtgcccatcg tcgaggtccg ctgaaccctc caatgggtgg ttcaggtaac ggttcctgcc
      301 ccagggttgt cacgccccgg tggtaccgtc gaaatcgatg gccagacgtc ccgcgcgccc
      361 ggattcgaag tcgcctactg cggattcccc gaagggatcc gagcgggtga agggcgctcg
      421 tgcggcagtg tccggccgcg gcgcctcctc ggctgaaccc actgaacgga agccgaaaac
      481 ggcgctggaa cggccggtcg gccgcaggcg tggggacgga gagccccgcg agtccaccgt
      541 gcggcgcatg gcccgggccg ccttcggtgg gcggggcgat gagatcctcg ggctcctgct
      601 ggtggtcggt ggcctcctga cgggcctctc ggtctatcta gagcgggccg gtgtcttcgg
      661 tcgtctcctc gactcgggcc tcggctggtc ggtcggttcg actcgtgtcc tgctgcccgt
      721 ggccatggtg ggcaccggtc tggccatgtt ccgtgaacgc agtgagttcg gcgagatctc
      781 ccgacggctt cccgtcgggc tggtcatggc cgtggtgtcg gtgaccggta ttctccacat
      841 cgcccgggat cgcccgggtc tcgacgacgg cgccgacggc ctgggtcgtg cgggtggtct
      901 ggttggcgtg ggcatcggcg gtggcctcga agccgtggtg gcgacgtggg gtgccctgct
      961 ggtgctgatc ggtgtgggcc ttgtggccgc cgcagtcatc acccggacta cggcacgaca
     1021 ggcagcccgt ggtgctgcca agggggtggc tttcacggct cgccatgcga cgcggggcat
     1081 ggtggccggt ctccgtcccg cagttcgggg cctccgaacc tggcttcgca acctcctcac
     1141 gccccccggc ggtcacgggc cgccacccgt cggagggatg ggcgatcgcc gaccaccggt
     1201 tccggtcgcc gagccggagc cagtaccgcc cgtggagccg gcgccgacga ccgccaccgg
     1261 tcccgcgccg gaacgcgccc cggctaaggc caagaaacgc aaggcccgga cgaagggcac
     1321 cgacggcagc gagcagctga ccatcgagct aggtccggcc atcgccgatt cgacgtggcg
     1381 actcccgacc gccggctacc tgtcacgcag cgaaacccac gacgtggacg ccaaggtcgt
     1441 cgaggagcgc gggttgcgcc tacaggaggc tctggcggcg cacggcgtcg agacccgcct
     1501 gtcagagatg accgtgggcc ccaccgtcac ccgctacgcc ctgcagttgg gcgagggcgt
     1561 caaggtggcc cggatcacca gtctccacaa ggacatcgcc tatgcgctgg ccgccgccga
     1621 cgtccggatc ctggccccca tccccggcca gcaggccatc ggcatcgagg tacccaacga
     1681 ggaccgggtg gtggtggccc tcggagacat cctcacctca cccgaggctg ctaaggcccg
     1741 ccatcccctt gaggtgggca tcgggcgcga catcagcggc cgctcggtac tactgaacct
     1801 ctcgaccatg cctcatcttc tcatcgccgg ggctaccggc gcgggcaagt cgtcgtgcat
     1861 caactcactc atcacttcgg tgctgatgcg ttccacgccg gaccaggtgc ggatgatcct
     1921 cgtggatccc aagcgagttg agatgggcca gtacgagggc gtgccccacc ttctgaccgc
     1981 accggtgacc gacccccgca aggcggccaa cgcactgcac tgggccgtca aggagatgga
     2041 gcgccgctac gacctgctct cggattgcgg ctttcgtgac atcgggggct acaacgctgc
     2101 ctacgaccgg ggcgacctga aggccccgtt gggcctcgcc gacgaggacg gcgagtcggt
     2161 gtcgtaccag cgcctgccgt tcatcctcgt ggtggtcgac gagctggctg acctgatgat
     2221 ggtggcggcc cgcgacgtcg aggactccat cacccggctg gcccagatgg cccgggccgt
     2281 gggcatccac ctcgtggtgg ccacccagcg tccatcggtc aacgtcatca ccggcgtcat
     2341 taaggccaac atcccggcgc ggctggcctt cgccgtgtcc agcctggccg acagccgggt
     2401 catcttggac cagccgggcg ccgagcgtct ggtgggaagg ggcgacatgc tcctcctggg
     2461 ccccagttcg agtgtggccc aacgaatcca aggtgcctgg gtggatgaga acgagatccg
     2521 tcagatcgtg gagtcctggg tggcccaggc gcggtcggcc gccgaggcgg ccaccgatcc
     2581 ggtcaccggt gcactgatgg actcgaccgg cgacacagct accgctgctg cgcccatcga
     2641 tccggccagc gtgccggcat ccccggcggc gaaatggcct gctggcacgt ctatgccgcc
     2701 cctagaagac atcaccaccg actcctctcg tccgacggcc accggggccg attccggcaa
     2761 cgacgacgaa ctgttcgagg aggcccgacg cctcgtggta accagccagt tggggtccac
     2821 ttcgatgctg caacgcaagc tacgggtcgg gttcgcccgg gccgggcgcc tcatggacct
     2881 catggaggag gctggcgtgg tcggaccgtc catcggctcc aaggcccggg aggttctgat
     2941 cgcccccgaa gaactcactg acctccagga gcagggctac tagttcctac gggtcccgtc
     3001 gtggcccggt tgcccctctc gtcgagcccg gcagcggggg aggtttagta ccctcgatac
     3061 gtggacgtcc tgcttgccat cgtcgtgctg gccggaggca tgaaactgtt gatgttggcc
     3121 gccgatcggt tcgtgtccgg tgcgtcgtcg atcgccgttc gcctccagat ctcacctctg
     3181 gtgatcggtg ccgtggtcct cggattcggc accagcgccc ccgaactagt cgtgtctacg
     3241 gtggccgcag ggcagggtca gatggacctc ggcctaggca atatcgtcgg atctaatatt
     3301 gccaacctca ccctggtgct gggcatcggc gctctgatcc ggccgatcga catcccagag
     3361 ggaaccaagc gcagggctgg agtgtgtgtg gcggcgatgc tcggcttcgc gctactcgtc
     3421 caggtccagg ggtcgtggtg gcacggtccc gtactggtcg ttggcgttct ggtggccgtc
     3481 tacctgatgt tcgtgatcga caccgacgac ctggccccac ctgccttatc gccggtggga
     3541 tccacggcgg ccgactgggg ctggacggtg ggcagcctgc tggtgaccct ggtagccgct
     3601 caggccgtcg tctggtcggc taccgagttg gccgaccagt tcggactcca aggcggattc
     3661 gtgggcctct ccatcgtggc cttcggcacg tcactgcccg agttggtgac cgtggtggct
     3721 gccgcccgac gcaac
//
LOCUS       DASCMR010000210         1590 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001033984, whole genome shotgun sequence.
ACCESSION   DASCMR010000210 DASCMR010000000
VERSION     DASCMR010000210.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1590)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1590)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1590
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001033984"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1388
                     /locus_tag="QGG16_05050"
     CDS             <1..1388
                     /locus_tag="QGG16_05050"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HJP24676.1"
                     /translation="CIIYSWNHFPDPVNPKAFLILILILETGMIGTFVAQDLVLFFVF
                     FEVVLLPMFFMIAVWGGEDRRYASLKFFLYTLFGSALMLVSFLALFFLTGAETFSIAG
                     LSEAVAAGGVSRTAQLWIFGGMFLGFGIKVPMFPFHTWLPDAHTQAPTVGSVILAAVL
                     LKLGTYGFIRIAIPILPDAAVTWAPWIGLLAVVGIIYGALGCLAQTDVKRLIAFSSVA
                     HMGFVMLGIATLTDFGINAAIMGMVAHGLITGMLFFLAGSMKERYHTLKISRLGGLLV
                     QAPRMGWIFGFCVMASLGLPGLAGFWGEFPAILSAYNPANGVPIETFRTYMVIAALGT
                     VLAAGYLLWLLQRTAFGNPPEEFADDPAITDTTRHEWIAWAPILALIVAIGIYPNLIF
                     RVSDGAVDASLSDCLTVDAHQLTDEEVEALGCSYVYRLGEAAGHDDDHGDDHEDDGHA
                     EEADEHAAAGN"
     gene            1392..>1590
                     /locus_tag="QGG16_05055"
     CDS             1392..>1590
                     /locus_tag="QGG16_05055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24677.1"
                     /translation="MTDALFLLAFQRPAIDWHGIAPELVLLAAGALITLVDIIFLEKA
                     LPFTAALAGLGLLATAVPLLTL"
BASE COUNT          224 a          540 c          480 g          346 t
ORIGIN      
        1 tgtgcatcat ctacagctgg aaccacttcc cggatccggt caaccccaag gccttcctga
       61 tcctgatcct gatcctcgag accgggatga tcggcacctt cgtggcccag gacctggtgc
      121 tcttcttcgt gttcttcgag gtcgtgctcc tgccgatgtt cttcatgatc gccgtctggg
      181 gcggcgagga ccggcgctat gcctcgctga agttcttcct ctacacgctg ttcggctcgg
      241 ccctgatgct ggtcagcttc ctggccctgt tcttcctgac cggcgccgag acgttctcca
      301 tagccggcct gtccgaagca gtggccgccg gtggcgtgtc ccgcaccgcg cagctgtgga
      361 tcttcggcgg gatgttcctt ggcttcggca tcaaggtccc gatgttcccg ttccacacgt
      421 ggctacccga tgcccacacc caggccccaa ccgtcggttc agtcatcctg gccgccgtgc
      481 tgttgaagct cggcacctac ggcttcattc ggatcgctat cccgatcctg cccgacgccg
      541 ccgtcacgtg ggcaccgtgg atcggcctgt tggccgtggt cgggatcatc tatggcgcgc
      601 tgggctgtct ggcccagacc gacgtgaaac ggctcatcgc cttctcgtca gtggcccaca
      661 tgggcttcgt gatgctgggc attgccacac tgaccgactt cggtatcaac gcggcgatca
      721 tgggcatggt cgcccacggc ctcatcaccg gcatgctctt cttcctcgcc ggttcgatga
      781 aggagcgtta ccacacgctc aagatcagcc ggctcggagg cctgctggtc caggcgcccc
      841 ggatgggctg gatcttcggc ttctgcgtaa tggcatcgct cggtttgccc ggcctggccg
      901 gcttctgggg tgagttcccg gccatcctct cggcctataa cccggccaac ggcgttccca
      961 tcgagacctt ccggacctac atggtcatcg ccgcgctcgg cacggtgctg gcggccggct
     1021 acctgttgtg gctgctccag cggaccgcct tcggtaaccc gcccgaggag tttgccgatg
     1081 acccggccat taccgacacc actaggcacg agtggatcgc gtgggcgccg atcctggccc
     1141 tcatcgtggc tattggtatc tacccgaacc tgatcttccg ggtctccgac ggtgcggtgg
     1201 acgcatcgtt gagcgactgc ttgaccgtcg atgcccacca gttgaccgac gaggaggtcg
     1261 aggcactcgg ctgttcgtac gtctaccgac ttggtgaggc cgctggtcac gacgatgacc
     1321 atggcgacga tcacgaggat gacggccacg ccgaggaagc cgacgagcat gcggcggccg
     1381 ggaactagcc ggtgaccgac gctctctttc tcctggcgtt ccagcgcccc gccatcgact
     1441 ggcacggcat cgcgcccgaa ctggtgctgc ttgccgccgg cgcgctgatc acgctggtcg
     1501 acatcatctt cctggagaag gcacttccgt tcactgcggc tttggccggt ctgggtctgt
     1561 tggctaccgc tgtacccctg ctgacgttgg
//
LOCUS       DASCMR010000211         1589 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001035696, whole genome shotgun sequence.
ACCESSION   DASCMR010000211 DASCMR010000000
VERSION     DASCMR010000211.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1589)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1589)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001035696"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..734)
                     /locus_tag="QGG16_05060"
     CDS             complement(<1..734)
                     /locus_tag="QGG16_05060"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HJP24678.1"
                     /translation="MVELLQNLIDGLGRGSIYALLALGVAVIFGVMHLLNFAHGELIT
                     VSGYAAFWAIEAGWSWILTVPLVIVVSVLTSLVIERVAFSRVRGADQFTLLLTSFGVH
                     FVVFAIFLLYVSASVKTFARPGWVTDTYALGSLRVEVYDTVVIAITLATLAGTTFVLQ
                     RTTFGLSLRAAAADFDTARLMGVRSDSVIRGAFALSGLLAGIASVFWLMRAGSTVPSA
                     GIDPMLKGVLAALIGGLGSLRGAVVGG"
     gene            complement(738..1430)
                     /locus_tag="QGG16_05065"
     CDS             complement(738..1430)
                     /locus_tag="QGG16_05065"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJP24679.1"
                     /translation="MSGLTTAYGEISALRDANLSVGSGEVVGLIGPNGAGKSTLLNTI
                     AGLLVPRAGRVDFDGRDVTGRSPEELLRAGLALVPERRRIFVDLTVEENLRIGGVTIP
                     ATDRGDLLNEMAELFPVLRDKWTTSAGYLSGGEAQQLAIGRALMSRPRLLMMDEPSLG
                     LAPILVDTVFQLVEALRDQGRTLLVVEQNATRMLEVADRAYVLRSGQVVAEGTGAELR
                     SDERLFDMFVGN"
BASE COUNT          348 a          526 c          459 g          256 t
ORIGIN      
        1 cccccgacga cggcaccccg gagacttcct agccccccga tcagtgccgc tagcacgcct
       61 ttcagcatcg ggtcgatacc cgcgctgggc acggtgctac cggctcgcat cagccagaaa
      121 acactggcga tacccgccag gagtcccgat agagcgaagg cgccacgaat gaccgagtcc
      181 gaccggaccc ccatcagccg ggcagtgtcg aagtcggcag cggcagctcg cagagaaagc
      241 ccgaaggtgg tccgctgcag cacgaacgtg gtgccggcca acgtggccag agtgatggcg
      301 ataaccaccg tgtcgtatac ctcgaccctt aaggaaccga gggcgtaggt gtcggtaacc
      361 caaccgggtc gtgcaaacgt cttgactgaa gcggatacgt agagcaagaa aatggcgaac
      421 acgacaaagt gcacgccaaa cgaagtgagt aggagcgtga actggtcggc accacgaacc
      481 cgactgaagg ccacccgttc gatgaccaat gacgtgagta ccgagacgac tatcaccaac
      541 ggaacagtca ggatccacga ccagccagct tcgatcgccc aaaacgctgc ataccccgaa
      601 acggtgatta gttcaccgtg cgcaaagttc aggaggtgca tgacgccgaa gatcacggcg
      661 accccaagag ccagcagagc gtagatactg cctctaccta ggccgtcgat caggttctga
      721 aggagttcaa ccaccgctca gttacccacg aacatgtcga agagtcgctc atcggatcgc
      781 aactcggccc cagtgccctc ggcaaccacc tggccgctgc gtaacacgta tgcccggtcg
      841 gccacctcga gcattctcgt cgcgttctgc tcgactacca gcagcgtccg accttggtcg
      901 cggagcgcct cgacaagttg gaagacggta tctacaagaa tcggagcgag gcccagcgac
      961 ggctcgtcca tcatcagcag tcgtggcctc gacatcagcg ccctgccaat ggccaactgc
     1021 tgggcctcgc cgccagacag gtagccagcc gatgtcgtcc acttgtcgcg aagaacggga
     1081 aatagttcag ccatctcgtt gagtaggtcg ccccgatccg tcgccgggat ggtgacgcca
     1141 ccgatccgca agttctcctc cacggtcagg tccacgaaga tgcgtcgacg ctcgggcacc
     1201 agcgccaggc ccgctcgcaa caactcttcc ggtgagcggc cggtgacgtc ccgcccgtcg
     1261 aagtccaccc tcccggcccg gggcaccaac aggccggcga tggtgttcaa cagcgtcgat
     1321 ttgcccgcgc cgttgggtcc gatgaggcca acgacctcac cggacccgac gcttaggttt
     1381 gcatcccgaa gtgccgagat ctcgccatag gcggtcgtga gacccgacac ctcgagcacg
     1441 ccgattcagt ctccgatggt ggcgacgagc acgtcttcgc cgttgacgat ccggttgatc
     1501 ggaactgcct tgggtggaat gccgttagtg ccggcatagc tgatctcacc tgacaggccc
     1561 tcaaagcccg agatctgctt cacggcttc
//
LOCUS       DASCMR010000212         8853 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001038947, whole genome shotgun sequence.
ACCESSION   DASCMR010000212 DASCMR010000000
VERSION     DASCMR010000212.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 8853)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8853)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8853
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001038947"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..520)
                     /locus_tag="QGG16_05070"
     CDS             complement(<1..520)
                     /locus_tag="QGG16_05070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24680.1"
                     /translation="MLTTGFKLWFGFAMAVALAAVFAGYPSGATETGPLSIGWKGGVG
                     NHVSYTILIFASGVLAMFGLVAVAFRDGDAEAQAEVLGLDEAPVGQVAVGNSLWPVFG
                     ALGIGVIGVGLVVNSAIFVLGLVIVAAIGIEWTMTNWSEKVSGDPEANAEARENLMRP
                     IEIPILGAVGVAV"
     gene            complement(536..1117)
                     /locus_tag="QGG16_05075"
     CDS             complement(536..1117)
                     /locus_tag="QGG16_05075"
                     /inference="COORDINATES: protein motif:HMM:NF012720.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HJP24681.1"
                     /translation="MMASTVPTAPTRPRTLVIASAFGTGSVLMYFGGLFAVYFSIRAD
                     ALAWGSQWYPEGAIQLVPGGMNMTTLALSAITMAWAVQAVLNDDRVHAMIAMALTAVL
                     GIAMVNQTVFYFMDIGLPIDASEAATMLYVIVGSHLVMVAVGVLWLGMLLLRTLGGQD
                     TNRHRDLVSAAALYWYATVAVYSVIWVGIYIAK"
     gene            complement(1114..2625)
                     /locus_tag="QGG16_05080"
     CDS             complement(1114..2625)
                     /locus_tag="QGG16_05080"
                     /inference="COORDINATES: protein motif:HMM:NF012343.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HJP24682.1"
                     /translation="MTTTDTAAASDPSPTALEEAVTSTDPNTLSRVWGFGGMTSVLLG
                     AIAGLLVSFERLDLASADVFSSADEMFQFWSAHRVALVLLGVLPALMGLATTVVPRQC
                     GGSLLFPRAAALACWTWLIGAVMTVAGFLVDGGLGTPGGAGQRQATALTLMGLLLVIG
                     GLLLASVCVMTTIVSGRVAGTGLRDLPFTAWTTLVAATIWTGMLPVLAANAVLAYVDL
                     RGRPALWFGAEDAIWEQLSWMFTHPAVYVLALPVIGIALDVLARATGVTQSNRDVLLV
                     ATAAFGFLSFGAFAQTFFDTPGTPVREEALSVVAAFTIVPVALAILGGVADTLRRGAS
                     NLGSKPPAEAVVALVAVLLVVVGTVIGAVHVIAPLDLLGTAVEGANFTFVVGAAVLGV
                     GAGFHHWGDDIVGPGARPGLFLLGGLALAFGVVLSGATDLISGLLNQNDFTGVTISAA
                     GHPNSGVDALNLVSMLGSLAVVAGLAVWMIAGALHMATAQSASGATVQEKGAA"
     gene            complement(2833..3768)
                     /locus_tag="QGG16_05085"
     CDS             complement(2833..3768)
                     /locus_tag="QGG16_05085"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015799106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0048034 - heme O biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HJP24683.1"
                     /translation="MHVHSSRPSGRPSGDPIPVTGGPFSRRQKLVGYVALTKPRIIEL
                     LLVTTVPTMFVAERGVPSIWLMVATMVGGTLAAGGANAVNMVVDRDIDSLMERTMHRP
                     LVRGVMSPRAALTFAVVIEVVAFVWLFATVNLLSAALAASATFFYVFVYTLWLKRTTT
                     QNIVIGGAAGAVPVLVGWSAVTNSLAWSPVILFLLIFFWTPPHFWALAIKYRDDYEAA
                     SVPMLPSVVSIEETVRKMAFYTVVLVVLTVVFSPVADMGAVYLVSALILGAVFGVMVE
                     AVRRRPTEQTAMRLFSFSITYLTLLFGAMVIDVLV"
     gene            complement(3814..4668)
                     /locus_tag="QGG16_05090"
     CDS             complement(3814..4668)
                     /locus_tag="QGG16_05090"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJP24684.1"
                     /translation="MENSMQIRDAVVVVTGAASGIGEAMVERFAAEGARALVAADRDS
                     AGIEVLAERVSAGGTTCEPVTCDVADEVSVKALVDGTVERHGRIDLVASNAGYVTVGG
                     LEAPDEEMHRMFGVHVMAHLYAARHAIPHMVANGGGHLLNTSSAAGLLTQIGSLHYSV
                     TKNAAVSLAEWISVTYGDRGIGVSVLCPQAVATNITTNSPTADLMPGEGPSGAAAVDG
                     VLTAAELADTVVEALADGRFHVLPHPNVAEYVRRKGDDVDRWLGGMRRFQSQLFPEGP
                     TPADWLLG"
     gene            4732..5664
                     /locus_tag="QGG16_05095"
     CDS             4732..5664
                     /locus_tag="QGG16_05095"
                     /inference="COORDINATES: protein motif:HMM:NF014665.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0016653 - oxidoreductase activity, acting
                     on NAD(P)H, heme protein as acceptor [Evidence IEA];
                     GO_process: GO:0006784 - heme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HJP24685.1"
                     /translation="MTADATDPQASPRRLSPDAYRRICGVALVLLAAIVVTGAAVRLT
                     GSGLGCSDWPTCEQDRFVPEAEFHGWVEFGNRLITGLVSVAVIAAVLGSIARTSRRAD
                     LLRWSWGLVAGVIGQVVLGGIVVLSHLNPWLVLGHFALSMVLVWNAVVLHHLAGDHAR
                     VSSVVLPAVRRRTRSLTALLAGLAMVVLSTGTLVTGTGPHTGSRDDPISRLPFSIRDV
                     ARVHGTMVVIVLLVVVALVAHARREPPGQPLTRSVRWLVAVVAAQATIGWTQYFTGVP
                     AVLVALHVAGATAFWMVVVKIRLLATDTPPEVAR"
     gene            5661..5975
                     /gene="clpS"
                     /locus_tag="QGG16_05100"
     CDS             5661..5975
                     /gene="clpS"
                     /locus_tag="QGG16_05100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012229018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HJP24686.1"
                     /translation="MSPAPIEVDQPGVDHRLDRELDNDVATDRPWIVLVWNDPINLMS
                     YVSFVFQKVFGYSREKADRLMMDVHHKGRAVVSSGAREKAEMDVFRLHEHGLWATLQQ
                     DD"
     gene            6031..6504
                     /locus_tag="QGG16_05105"
     CDS             6031..6504
                     /locus_tag="QGG16_05105"
                     /inference="COORDINATES: protein motif:HMM:NF020989.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2017 family protein"
                     /protein_id="HJP24687.1"
                     /translation="MFLRKRVPRTLKREGDRTTVLLDEEERALLVDLAEQFRSVLAAD
                     NDPDLRRLYPTAYADDAERDADYAGLVHDDLLSTRLDAVDGLIGSAAAESIDDEELAA
                     WMQVLNGLRLLLGTRLDISEEDEFDPEAADAPTRALLAWLGFVLEEAVESAAAGL"
     gene            6577..6649
                     /locus_tag="QGG16_05110"
     tRNA            6577..6649
                     /locus_tag="QGG16_05110"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6611..6613,aa:Glu,seq:ttc)
     gene            6681..6758
                     /locus_tag="QGG16_05115"
     tRNA            6681..6758
                     /locus_tag="QGG16_05115"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6716..6718,aa:Asp,seq:gtc)
     gene            6791..6866
                     /locus_tag="QGG16_05120"
     tRNA            6791..6866
                     /locus_tag="QGG16_05120"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6824..6826,aa:Phe,seq:gaa)
     gene            6928..7731
                     /locus_tag="QGG16_05125"
     CDS             6928..7731
                     /locus_tag="QGG16_05125"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: protein motif:HMM:NF024744.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004721 - phosphoprotein phosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein phosphatase"
                     /protein_id="HJP24688.1"
                     /translation="MAETPDARIVVAPSNLRDLGGLATSDGHTVRTGQLFRSGHLCDL
                     GNADRAIVKSLGLRTIVDLRRPAEAKVRPHPDLPGVDVVGISVSNDDNEFAVVANAML
                     DPQAEPLGPDHITEYFRTLVTDRIDRYRPVFDLATDPDRQPLLFNCTAGKDRTGVVAA
                     VLLRILGVNDDLVMADYLLSNEVRRSWIETAKADHRQRIAHHLGITPDEVPEERMASS
                     RALLYCREDYLRAVLDTVEARWGSWDGFVADGLYLDEARLAAFRTSLLY"
     gene            7770..>8853
                     /locus_tag="QGG16_05130"
     CDS             7770..>8853
                     /locus_tag="QGG16_05130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24689.1"
                     /translation="MTNAWFMDDEPSESFPIYTRGNVGEVFPDPVSPLTADHTWHGAG
                     NHGLLGFMTRFTIDADELDPGQKTMFEIFGGYMFLNLSVARLMGARSSGMTPELVDLG
                     FFGTGASLPPYVARPKDGDPAITQRVDGMMFGWMTATKAPEVAAQAAEVADIVANRPN
                     LSTATDADLVARTREMPPVFSRLFATHSEASAAASVVMGALTVAALGVGKPGLDLRIA
                     GGLGGVASAEPSDVLWDLGRLVAASPELTEAFDEGLDGLIDRLQDLGPAAADFLTGFA
                     DFTTTYGSRGPNEWELRSRTWETHPELPLALVDRMRFSPDSDDPSTTRAAAHQRSGEA
                     LELLQSMVADNEEAAGTLAIAAPAARA"
BASE COUNT         1699 a         2989 c         2823 g         1342 t
ORIGIN      
        1 ggacggccac accgactgcg cccaggatcg ggatctcgat ggggcgcatg aggttctcac
       61 gggcctcagc gttggcctcg ggatcaccgg agaccttctc agaccagttg gtcatggtcc
      121 actcgatgcc aatggcggcc acgatgacca gacccagaac gaagatcgcg gagttgacga
      181 ccagccctac gccgatgacg ccgataccga gcgcaccgaa gaccggccac agcgagttgc
      241 cgacggctac ctgaccgacc ggggcttcgt ccaaacccag tacctcggcc tgtgcctcgg
      301 cgtccccgtc acggaaggcc acggcgacaa ggccaaacat ggccagcaca ccggatgcga
      361 agatcaagat ggtgtaggag acatggttgc ccacgccacc cttccagccg atggagaggg
      421 gcccggtctc ggtcgcaccc gaggggtacc cggcgaacac ggccgccagc gcgacggcca
      481 tggcgaagcc gaaccagagt ttgaagccag tggtgagcat gtcgatctcc cgccgctact
      541 tggcgatgta gatgccgacc cagatgaccg aatacacggc caccgtggca taccagtaga
      601 gggccgccgc cgagacaagg tcccgatgcc ggttggtgtc ctgcccaccc agggttcgca
      661 ggaggagcat cccgagccag agcacaccga cggccaccat gacgaggtgc gagccgacga
      721 tgacgtacaa catcgtcgcc gcctcgctgg cgtcgatggg caaaccgatg tccatgaagt
      781 agaagacggt ctggttgacc atggcgatcc cgaggaccgc ggtgagcgcc atggcgatca
      841 tggcgtggac ccggtcgtca ttcaggacag cctgaacggc ccacgccatg gtgatggcgg
      901 acagggccag cgtggtcatg ttcattccgc cgggcaccaa ctggatggct ccctcggggt
      961 accactgact gccccaggcc agggcgtcgg cccgaatgga gaagtagacg gcgaacaggc
     1021 cgccgaagta catgagaacg ctgcctgtcc cgaatgccga ggcaatcacc agagtccgcg
     1081 gacgggtcgg ggcggtgggg acggtggagg ccatcatgcg gcgcccttct cctgaacggt
     1141 ggccccactg gcactctggg cggtggccat atgaagggct ccggcgatca tccagaccgc
     1201 caggccggcc acgacagcca gtgagccaag catcgagacc aggttcaagg cgtcgactcc
     1261 ggagttcgga tgaccggctg cggagatggt gaccccggtg aagtcgttct ggttgagcag
     1321 gccactgatc aggtctgtag ctccgctcag gacaacaccg aatgcgaggg ccaacccacc
     1381 gaggaggaac agaccgggac gggcgcccgg gccgacgatg tcatcacccc agtggtggaa
     1441 gcctgcacct actcccagga cggcagcacc gactacaaag gtgaagttgg cgccttcgac
     1501 agcggtaccg agcagatcca gtggggcgat gacgtgcacg gcaccgatga cggtgccgac
     1561 cacgaccagc agcacggcca cgagagccac cacggcttcg gcggggggct tcgaacccag
     1621 attggaggca ccccggcgaa gcgtgtcggc aacgccaccg aggatggcca aggcaaccgg
     1681 cacgatggtg aaggcggcca cgaccgacaa cgcctcttca cggaccggtg tacccggcgt
     1741 gtcgaagaag gtctgagcga aggcgccgaa ggacaggaag ccgaaggccg cggtggccac
     1801 cagcaggacg tcacgattgg actgggtgac cccagtggcc cgcgccagga cgtccagagc
     1861 gatgccgatg accggcaagg ccagcacata gaccgccgga tgggtgaaca tccaagagag
     1921 ctgctcccag atggcgtcct cggcaccgaa ccagagggcc gggcgacccc ggaggtcgac
     1981 gtaggccagc accgcgttgg cggccagtac cggcagcatc cccgtccaga tcgtggcggc
     2041 aaccagcgtg gtccaggcgg tgaaaggaag gtcccgaagg cccgtaccgg cgacccgacc
     2101 agaaacgatg gtggtcatca cgcagaccga ggccagcagc aggcccccga tgaccagaag
     2161 caggcccatg agggtcaggg cggtggcctg tcgttggccg gccccacccg gggtgccgag
     2221 accgccgtcg acgaggaatc cggcaacggt catgacggcg ccgatcaacc aagtccagca
     2281 ggccaacgcg gcggcccggg gaaatagcag cgaaccgccg cactgacggg gaaccacggt
     2341 ggtggcgagg cccatcaatg ctggcaggac gccgagcagc actagggcga cccggtgagc
     2401 ggaccagaac tggaacatct cgtcggccga agagaacacg tccgccgaag cgaggtcgag
     2461 tcgctcgaag ctgaccagca ggccggcaat ggcccccaag agcaccgacg tcatgccgcc
     2521 gaagccccac acccgcgaca gggtgttcgg atcagtggag gtgacggcct cctccagagc
     2581 agtcggggat ggatcggagg cggcggcggt atcagtcgtc gtcatcgaag cttcttcgtt
     2641 cggtgggctc gtgcgatgcc ctcgtgcaac gatccggaga agcccggacc acacgaggct
     2701 aggcgaatcg tcagagattc cggcacccgc acgaacgggc aatctagtcg gccccgggtc
     2761 ggcgatctga ctcgaacgga gaaaaccagg cagcccccaa caggtccctc cagtccggca
     2821 accggcccga tgtcagacca gaacgtcgat caccatggct ccgaagagca gcgttaggta
     2881 ggtgatcgaa aaggagaaca atcgcatcgc cgtttgctcg gtcgggcgac gtcgaaccgc
     2941 ctccaccatg acaccgaaga ccgcacccag gatcaacgcc gagactaggt acacggcacc
     3001 catgtcggcc accggcgaga agaccacggt gagcacgacc aaaaccaccg tgtagaaggc
     3061 catctttcgg accgtttcct caatgctcac taccgacggg agcatgggga cggaagccgc
     3121 ctcgtagtca tcccgatact tgatggccag tgcccagaag tggggtggcg tccagaagaa
     3181 gatcaacagg aacaggatga ccggtgacca cgccaacgaa ttcgtcaccg ccgaccatcc
     3241 gaccagcacc ggtacggccc ctgccgcccc accgatcacg atgttctgcg tcgtcgtgcg
     3301 tttgagccac aacgtgtaga cgaacacgta gaagaaggtg gccgacgctg ctaacgcagc
     3361 gctgaggagg ttgacggtgg caaacaacca gacgaaggcg accacctcaa tgaccacggc
     3421 gaaggtgagt gccgcccgcg gcgacatgac gccccgtacc agcgggcgat gcatggtccg
     3481 ctccatgagg ctgtcgatgt cacgatcgac caccatgttc acggcgttag cgccacccgc
     3541 agccaacgtc ccgccgacca tggtggccac catcagccag atcgacggca caccgcgctc
     3601 ggccacgaac atggtcggca ccgtggtgac caggaggagt tcaatgatcc tcggcttggt
     3661 gagggccacg tagcccacca acttctgccg tcgggagaac ggaccaccag tcacagggat
     3721 cggatcgccg gaaggacgac cgctgggacg agaagagtgg acgtgcaccg gctcaggcta
     3781 ggaggtgggc cggcccatcc gaaccgtctc aagtcagccg agcagccagt ccgcgggcgt
     3841 cgggccctcc ggaaacagct gactctggaa gcgtcgcatc ccacccaacc accggtccac
     3901 gtcatcgccc ttccggcgaa cgtattccgc gacgttcgga tgggggagca cgtggaaccg
     3961 cccgtcggcc agagcctcga caaccgtgtc ggcgagttcg gcagcggtga gcacgccatc
     4021 gacggccgcc gctcccgatg gtccctcgcc gggcatcagg tcggccgtcg ggctgttggt
     4081 ggtgatgttg gtggccacgg cctgtgggca caaaaccgac accccaatcc cgcggtcccc
     4141 gtacgtcacg ctgatccact cggccaggga caccgcagca ttcttggtaa ccgaatagtg
     4201 gagcgacccg atctgggtca gcaacccagc cgccgaggaa gtgttgagca gatgaccgcc
     4261 accattggcc accatgtggg gaatggcatg acgggccgcg tacaggtggg ccatgacgtg
     4321 cacgccgaac atgcgatgca tctcttcatc gggggcctcg aggccaccta ccgtgacgta
     4381 cccggcattg gacgccacca ggtcgatccg gccatgacgt tccaccgtcc cgtcaactag
     4441 cgccttcacc gatacctcgt cagccacgtc gcaggtgacc ggctcacagg tcgtgccgcc
     4501 cgccgacacc cgttcggcca ggacctcgat gccggccgaa tcccgatcag cggccaccag
     4561 ggctcgcgcc ccttcagccg cgaaccgttc aaccatggcc tcgccgatgc cgctcgcggc
     4621 accggtcacc accaccactg catcacgaat ctgcatcgag ttctccatga ccgcggatcc
     4681 tagatatcag tcctgctcgt accctccacg gccgctcgta gcctcaggga cgtgacggcc
     4741 gacgccacgg accctcaagc ctctccccgc aggctctccc ccgacgccta ccgccgcatc
     4801 tgcggggtgg cgctcgtctt gctggccgca atcgtggtca ccggcgccgc ggtccgtctc
     4861 accgggtcgg gcctcggatg ctcggactgg ccaacctgtg agcaggaccg attcgtcccc
     4921 gaggccgagt tccacggctg ggtggagttc ggcaaccggt tgatcaccgg gctggtctcg
     4981 gtggcggtaa tcgccgccgt gctgggctcg atagcccgaa cttcccgacg tgcggacctt
     5041 ctacgatggt cgtgggggct ggtggctggc gtgatcggcc aggtggtgct gggcggcatc
     5101 gtggtcctca gtcacctgaa cccgtggctg gtgttgggcc acttcgccct gtcgatggtg
     5161 ctggtgtgga acgccgtggt gctccaccac ctggctggcg accatgcacg cgtatcgtcg
     5221 gtggtgctcc cggccgttcg tcgccggacc cgatcgctca ctgccctact cgccgggttg
     5281 gccatggtgg tcctgtccac tgggacgctg gtaaccggca ccggcccgca caccgggagt
     5341 agagacgacc cgatttcccg gcttccattc tccatccggg atgtggcccg tgtccacggg
     5401 accatggtgg tcatcgtcct cctggtggtc gtagcgctcg tggcgcacgc tcgacgggag
     5461 ccacccgggc agccgctgac tcgttctgtt cgttggctgg ttgccgtggt ggccgcccag
     5521 gcgaccatcg gatggaccca gtacttcacc ggggttccgg cggttctcgt cgccctgcac
     5581 gttgcagggg ccaccgcgtt ctggatggtc gtcgtcaaaa tccggctgct ggccaccgat
     5641 actccacccg aggtggcccg atgagcccag ctcccatcga agtcgaccag ccgggcgtgg
     5701 accacaggct cgaccgggaa ctcgataacg acgtggcaac cgaccgaccg tggatcgtgc
     5761 tggtatggaa cgacccgatc aacctgatgt cgtacgtgtc gttcgtgttc cagaaggtct
     5821 tcggctattc ccgagagaag gccgaccggt tgatgatgga cgtccaccac aagggccggg
     5881 cggtggtatc gagcggcgcc cgggagaagg ccgagatgga cgtcttccga ctccacgaac
     5941 acggcctgtg ggccaccctt cagcaggacg actgagcagt ggagacggaa accatgtgtc
     6001 tggggaccca atgttcctga agagaaaccc atgttcctga gaaaaagggt cccccggacc
     6061 ctgaagcgtg aaggcgaccg gacaacggtc ctgctcgacg aggaggagcg ggcactcctg
     6121 gtcgacctgg ccgaacagtt tcggtcggta ctggcagccg acaacgatcc ggacctccga
     6181 cggctctacc cgacggccta tgccgacgac gccgaacggg acgccgacta tgccggcctc
     6241 gtccacgacg acctgctcag cacacgcctc gacgccgtgg acggtctcat cggatcggct
     6301 gccgcagagt ccatcgatga cgaagaactc gccgcttgga tgcaggtcct caacgggttg
     6361 cgtcttctcc tgggcacgcg cctcgacatt tccgaggagg acgagttcga ccccgaggca
     6421 gcggacgccc caacccgggc gctcctggcc tggctgggat tcgtgctcga agaggccgtg
     6481 gagtcggccg cggcaggtct ctgatcaacc agcgtccagc acgtgacgcg tcccggaggg
     6541 tcgctggtaa cgtgaccccg ctctcagcga ggtccggccc ccatcgtcca gcggcctagg
     6601 acgcctgcct ttcacgcagg taacacgggt tcgaatcccg ttgggggtgc taaggcggta
     6661 cgactcttgt cggaccacct ggtcctgtgg tgcagtttgg agtgcacgcc ggcctgtcaa
     6721 gccggaggtc gcgggttcaa atcccgtcag gaccgccacc gtcgctcgcc ctccggggcg
     6781 agcggtgcac ggtcgggtag ctcagttggc agagcgtccg cctgaaaagc ggaaggtcac
     6841 cggatcgacg ccggtcccga ccaccaccag aagcccgccc ccagggcggg tcttctgcgt
     6901 tcccgacaag ccgtctatct tccaagcatg gctgaaaccc ccgatgcacg gatcgtcgtc
     6961 gcaccatcga acctgcggga cctcggagga ctggccactt ccgacgggca caccgtgcgg
     7021 accggacaac tattccggtc tggccacctt tgcgacctgg gcaacgccga ccgggcgata
     7081 gtcaaatccc tcggtctacg aaccatcgtg gacctccgac gacccgccga ggccaaggtc
     7141 agacctcacc ccgatctacc cggcgttgac gtggtcggca tctcggtgtc caacgacgac
     7201 aacgagttcg ccgtggtggc caacgccatg ctcgaccctc aggccgaacc cctaggaccg
     7261 gatcacatca ccgaatactt ccggacgctg gtgaccgacc gcatcgatcg ctaccgaccg
     7321 gtgttcgacc tagccaccga cccggaccgc cagccactgc tcttcaactg cacggccggc
     7381 aaggaccgca ccggagtggt ggccgccgtc cttctgcgaa tcctcggggt caacgacgac
     7441 ctggtgatgg ccgactatct actgtccaac gaggtccgcc gctcttggat cgagacagcc
     7501 aaggccgacc accggcagcg cattgcccac cacctcggaa tcactcccga cgaggttccc
     7561 gaggagcgga tggcatcgtc ccgggccctg ctgtactgcc gcgaggacta cctccgcgcg
     7621 gtcctcgaca ccgttgaggc ccgatggggt tcgtgggacg gcttcgtggc cgacggcctc
     7681 tacctcgacg aggcccgcct cgccgccttc cgaacatccc tgctctacta agtgggcggc
     7741 atcgaccaac tgccatccgg aggaaaccga tgacgaacgc ctggttcatg gacgacgagc
     7801 cctcggagtc gttcccgatc tacacccgag gaaatgtggg ggaggtcttt cctgaccccg
     7861 tttcgcccct tacggcagac cacacctggc acggggccgg aaaccatggc ctgctgggat
     7921 ttatgacccg attcaccatc gacgcagacg aactcgaccc cggccagaag accatgttcg
     7981 agatcttcgg tggctacatg ttcttgaacc tcagcgtggc ccggctcatg ggcgcccgct
     8041 cgtcgggcat gacccccgaa ctagtcgatc tgggcttttt cggtaccggc gcttcactgc
     8101 cgccctacgt agcgcgaccc aaggacggcg acccagcgat cacccagcgg gtcgacggga
     8161 tgatgttcgg ctggatgacc gccaccaagg cccctgaggt ggcagcccaa gcggccgagg
     8221 tggccgacat cgtggccaac cgacccaacc tctcaacagc gaccgatgcc gacctggtgg
     8281 cccgaacccg cgagatgccc ccggtgttca gccgcctttt cgccacccat tcggaagcca
     8341 gcgccgcggc gagcgtggtc atgggtgccc tcacggtggc cgctctgggt gtcggcaagc
     8401 caggcctgga cctgcggatc gccggaggcc tgggtggcgt ggcatccgcc gaacccagcg
     8461 atgtgctgtg ggatcttggc cgcctggtgg ccgcttcacc ggagttgacg gaggcattcg
     8521 acgaaggcct cgacgggctg atcgaccggc tccaggacct cggtccggcg gccgccgact
     8581 tcctcactgg attcgccgac ttcaccacaa cctacggaag ccgcggcccc aacgaatggg
     8641 agctccgttc caggacctgg gagacccatc cggaactccc actggcgctc gtcgaccgaa
     8701 tgcgattctc accggactcc gacgacccgt cgacgacgcg tgcggccgcc caccaacgat
     8761 caggcgaagc gcttgaactt ctgcagtcaa tggtggccga caacgaggag gcggcaggca
     8821 ctctggccat cgccgcgccg gctgcccgag cct
//
LOCUS       DASCMR010000213        11952 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001041256, whole genome shotgun sequence.
ACCESSION   DASCMR010000213 DASCMR010000000
VERSION     DASCMR010000213.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 11952)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11952)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11952
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001041256"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(150..977)
                     /locus_tag="QGG16_05135"
     CDS             complement(150..977)
                     /locus_tag="QGG16_05135"
                     /inference="COORDINATES: protein motif:HMM:NF024117.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PD-(D/E)XK nuclease family protein"
                     /protein_id="HJP24690.1"
                     /translation="MPSPPRSFSVSSAGLFNQCQRRWRFRYVEKRSDPPGEAALLGTF
                     VHRVLELLCAEPAGGRTTDRARELAATAWPETRDDGNFIALALDDDAQRQFRWRGWTA
                     IENLWEFEDPAQVEVEATEAKVSATVGGVPFFGIIDRLDNTADGLVVTDYKTGKAPRP
                     GDVPEKLDQVLLYAAAVEDHRGERPSRGRLYFLGNSVVETPVTEDGLEAAVGRFVETW
                     DGVGKACSSDQFEARVGPLCGWCAHVADCEEGTTEVQVRVARGRMRADAPARTLLGL"
     gene            complement(991..3051)
                     /locus_tag="QGG16_05140"
     CDS             complement(991..3051)
                     /locus_tag="QGG16_05140"
                     /inference="COORDINATES: protein motif:HMM:NF012430.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HJP24691.1"
                     /translation="MAAAQSKSRSKGSGYDADAIQTLEGLDAVRKRPGMYIGGTGGPG
                     LMHLVWELLDNAVDEAAAGFARKIDITLHRDHSVEVADDGRGIPIDRHAKRKISALEV
                     VLTELHAGGKFGGGAYGASGGLHGVGASVVNALSTKLVAQVDRDGHTHELSFKERVAG
                     HFSGSAFKASHDLAKVKRLSKNKTGTRIRFWPDREIFDEDAHVDAKEIRERIVQSCFL
                     VPGVKVVLVDKRAGGAEPFEFVSRGGLADLVDHLSVGDNACEIITLSGISEFTERVPV
                     NGKMSDVDRECTVEVALRWVKGYDPRVESFVNTIPTSHGGTHSAGFDRALTRAVNDVL
                     LKDTRKLAKLAKENKHRATKDDVQEGLVAALKVVFPEPQFRGQTKQELGTPAVEKIVY
                     EVVKGGLTDWFSGGGPKTHINAVRDKLTNAVINRVTSKQMLETRRKAASMGSTGMPDK
                     LADCRTHGPDSELIIVEGDSAAGPAKAGRNSANTAILPLRGKVVNAGKATLKQVLDNA
                     EAQALFTAIGAGSGNDFDIDAARYGRIVILCDADVDGSHIRCLLLTLIHKYMCPLLTE
                     GRVFAAQPPLYSLRVGDTVHRAFTDEERDEITASLAKGGRNVENLRWNRFKGLGEMNV
                     EELAECALDPETRVLKRLTMEDGKAAADAANLFEILMGADVTQRRDYLIANSTLLDPA
                     ALDV"
     gene            complement(3054..5471)
                     /locus_tag="QGG16_05145"
     CDS             complement(3054..5471)
                     /locus_tag="QGG16_05145"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF004044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing)"
                     /protein_id="HJP24692.1"
                     /translation="MGKQQKLIPDEMDYAREIVDVSVAQEMKESFLAYSLSVITSRAI
                     PDIRDGLKPVQRRILYSMLRMGIRPDTPHRKSARVVGDTMGRYHPHGDSAIYDALVRM
                     GQSFSRGMTLIDPQGNFGSLDDPPAAPRYTECRLSEAAMAMVRELDEDTVGFRPTYDG
                     ESTEPTHLPALLPNLLLNGTTGIAVGMATNMPTHNLAEIHAAVTLVMKQRRPKPTVDE
                     LLAVLPGPDFPSGGIVVDDGIRDAYASGRGSIRIRARAHVEEAGKGRQAIVVTELPYL
                     VGPERVISKLKELNEAGKVAGIADFKNLSDRHTGLRLQVTVKPGHNPQAVLGELYRLT
                     PMEESFGINNVVLVDGEPRTVGLYDLCRHYIDHRLEVVVRRTAYRRDRAEERLHIVAG
                     LLVALQAIDEVVTIIRGSEDTATARDALMERFSLSRVQTDHILDMPLKRLTALEVRRL
                     EDERAELEAAIAGHTKLLESEARQRTLVLNELGEAVKQFGRDRSTEIVNPDDLPVFDS
                     IEVADDVVDEPCVVTLSTSGQIGRLPAEGAKRATPGRHDVLVAQLLTRTTSTVTAVTS
                     EGRALQVLPAELADGEGRARGAGAAQAFGTNRGEIIHTVVADGDEHLVVVSAQGAAKR
                     LTMAEVRETRGGKTIMKLKAGDRVAAAFTAPDGIDVVFVASDGQVLRTAVDGISVQGR
                     GASGVAGMKLRDGATVVAAAAALGDDTLVTVTDDSSVKATPLSELEAKGRGGIGVRVS
                     RLADGASLSTAHVGPTIGLLAIMTSDDDAKKPDPTPVPLMLEATKRDLVSAASERQIL
                     AIGPPRW"
     gene            complement(5606..5920)
                     /locus_tag="QGG16_05150"
     CDS             complement(5606..5920)
                     /locus_tag="QGG16_05150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24693.1"
                     /translation="MNHARIATEALRFRLGTFSARVDSPPGLNADEAGALLVACGDPG
                     VDHALRMVGETWCQAGLTPDHIDHPWTAGEAARLRSVGGSALLDALDELVTGVTRCRV
                     RG"
     gene            complement(5988..6971)
                     /gene="hemH"
                     /locus_tag="QGG16_05155"
     CDS             complement(5988..6971)
                     /gene="hemH"
                     /locus_tag="QGG16_05155"
                     /inference="COORDINATES: protein motif:HMM:NF012964.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004325 - ferrochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HJP24694.1"
                     /translation="MPESTKHCCSWPSGDRSRSTTWIHSWPGSRLDDPFPPERLAQVA
                     DRYRSVGGRSPLNARLRTLQARVAERLVDRGVNTPVFWGNRNAAPLLVDTIAEMRDAG
                     VRRAVAWVASPYASYSTCRQYIENIETAQTAVGADAPVVDRIGSHHDHPGLIEPAADR
                     LAEALDRLPADRRDRAHLLFSAHSIPSTMAANCDYVAQLHEVARLVAQRVDPAGRYNR
                     ELVWQSRSGSPQTSWLEPDVGDRIDALAVAGVDAVVVSPIGFPVENFEIVWDLDVEAA
                     ARAERAGVAFQRAGAIDDDPRFIDMVVDLFLGHDPASVRTCRTDCCLPPPH"
     gene            complement(7012..7740)
                     /locus_tag="QGG16_05160"
     CDS             complement(7012..7740)
                     /locus_tag="QGG16_05160"
                     /inference="COORDINATES: protein motif:HMM:NF004858.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crotonase/enoyl-CoA hydratase family protein"
                     /protein_id="HJP24695.1"
                     /translation="MSDETTPTPVTIQYTDGPTDAGVAVITMDDGKANALGHDLLGAL
                     LAALDEVDASGADAVVIVGRPGRFSAGFDLSVMKAGGNGPKEMLAAGVDVFLRIYQFP
                     RPVVVACTGHAIAAGAIILMSSDLRVGTAGEFKIGMPELTIGMPLPFFATELMRDRLS
                     KRHVARATLGQMYDPETAIDAGYLDEVVNAEDLLDTAVAHARVAGGVGRGAMKRTRIT
                     TRGVIADAVRSGLAEDLSHFVVEG"
     gene            7833..8492
                     /locus_tag="QGG16_05165"
     CDS             7833..8492
                     /locus_tag="QGG16_05165"
                     /inference="COORDINATES: protein motif:HMM:NF013286.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HJP24696.1"
                     /translation="MGDILTTERVMEVSDGALNKVLEVRDSQDDGEDPTTLSLLIDVT
                     GVSGVDYVYDLAFVPIVELPDDCHRWTVSADADGKTGATLDMAVGDESRSKLAGATLD
                     LPSNPVQGGLVIRNPNRPNPLGDVGELELTGEVPERIEQLLEKTVNPMLASHGGFATL
                     IGVDTHTAYVTMGGGCQGCSMSQATLTEGIQRAIVEAVPEITDVVDATDHSAGDNPFY
                     S"
     gene            complement(8547..10388)
                     /gene="dxs"
                     /locus_tag="QGG16_05170"
     CDS             complement(8547..10388)
                     /gene="dxs"
                     /locus_tag="QGG16_05170"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015797945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HJP24697.1"
                     /translation="MRLDALRSPADLRDLGPEELAALATELRQRIIDTVDRTGGHLGS
                     NLGAVELTLALHRVFDSPRDAILFDTGHQTYVHKLLTGRVSEFDGLRQAGQMSGYASR
                     DESAHDWIENSHASTVLSYAHGLATARATNSDRRRVVAVIGDGSMTGGMAFEGLNNLG
                     HSGLPVTVVLNDNGRSYAPTVGRLSESLIRIRSNPTYMRRQRHLEDLAERLPWVGDLI
                     ERGINATKAALREMFEPTAFFEALGVHYLGPFDGHNIAEVEDALTNAAEFDGPVVVHV
                     LTQKGRGHAPAEQDPIKHMHDTGGVKPGSYTEAFTESLLKAAESHPELVAITAAMPDS
                     TGLLPFRDRFPDRCFDVGIAEQHAVTAAAGMAMGGLRPVIALYATFLSRAFDQTNLDV
                     GLHGLPVVFCLDRAGITGDDGPSHHGVLDMVLLSRVPGMTVLAPSSYQELQQMFEDTM
                     AITDGPVAIRWSKTPAPHVGWDEVGRGLAARQVRAGDGQVCLLGAGKMLAAALAAADE
                     LATDGIDATVWDPRCIRPLDEKMLDNAAEHRLVVTIEDGFREGGFGTGVLDALAARPP
                     RAETPMPRVAVLGVPVAHHAHGPADALLASFGLDGPGVAASVRFRLG"
     gene            complement(10438..11250)
                     /locus_tag="QGG16_05175"
     CDS             complement(10438..11250)
                     /locus_tag="QGG16_05175"
                     /inference="COORDINATES: protein motif:HMM:NF025736.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HJP24698.1"
                     /translation="MPGAGLVRFPRRAAGPGSGLHWWVEILLVFGFYAVYSTIRNLFG
                     SESVSVADALANAERIIDLERSIGLYRELEIQQAFLDHRWFIQFWNLFYGTFHFAVTV
                     FALVWVYRRFPHLYARHRSTFLCTTGLALIGFALFPLMPPRLLSDCGTFGACLAHMHP
                     YVDTVTDVGGLWSFDSGTMQRVSNQYAAMPSLHFAWATWCALVIWPTVRTRAVRALAV
                     AYPVATLFAVIVTGNHFWLDAAGGLVALGAGTLLAGVLVRAWIRLHHRLRAN"
     gene            complement(11305..11685)
                     /locus_tag="QGG16_05180"
     CDS             complement(11305..11685)
                     /locus_tag="QGG16_05180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hotdog domain-containing protein"
                     /protein_id="HJP24699.1"
                     /translation="MPGLRGRASHTVTDADTAIALRSGEVPVLGTPRLVALMEEASVE
                     ALDGSLADGETSVGMRIHVDHMAPTAPGVGVTAEAVLEGVEGRRLTFGATATVGDAVV
                     ATASIIRVVVETHRFLDRVNGDLT"
     gene            11772..>11952
                     /locus_tag="QGG16_05185"
     CDS             11772..>11952
                     /locus_tag="QGG16_05185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24700.1"
                     /translation="MADGNGSSGIPDTGRLETGLLDSGLLADTLSVAMATGGEFAEVF
                     VEDRRSTSAVLDDGRI"
BASE COUNT         1936 a         3802 c         4159 g         2055 t
ORIGIN      
        1 acgagcggac cgacctgtta aaccggatct gggtactggc cgctgtggcc gctctggttc
       61 tggtgctggt ggcggtacgc cgccgtcggc ggaacggctg accgcctaga ggcctacttt
      121 taggtaacgg tttctcaggg ccccgccatt tagagaccca gcaatgtgcg ggccggggcg
      181 tcggcgcgca tacggccccg agcgacccgg acctggacct cggtggtgcc ttcttcgcag
      241 tcggccacgt gggcgcacca gccgcagaga ggtccgaccc gcgcttcgaa ctgatcggat
      301 gagcaggcct tcccgacgcc gtcccacgtc tcgacgaagc gaccaaccgc tgcctcgagg
      361 ccgtcctcgg tcaccggagt ctccacgacg ctgttgccga ggaagtagag gcgtccgcgg
      421 ctgggacgtt cgccccggtg gtcctccacg gcggcggcgt agagcaggac ctggtcgagc
      481 ttctcgggga cgtctcccgg gcggggggcc ttgcctgtct tgtagtcggt gaccactagt
      541 ccgtcggccg tgttgtcgag gcggtcgatg atcccgaaga agggcacgcc gccgacggtg
      601 gccgacacct tggcctcggt ggcctccact tcgacttggg ccgggtcttc gaactcccag
      661 agattttcga tggccgtcca acccctccac cggaactgcc gttgcgcgtc atcatccagg
      721 gccagagcga tgaagttgcc gtcgtcccga gtttcgggcc aggccgtggc agccaactct
      781 cgcgcacgat cggtggtccg acctccggct ggttcggcgc agaggagctc tagcacccgg
      841 tggacgaagg tccccagcag ggcggcctct cccggcgggt cggaccgctt ctcgacgtag
      901 cggaaccgcc atcgtcgctg gcactggttg aagaggccgg ctgacgagac cgaaaaggag
      961 cggggagggg agggcatggg ttgagggttc ctagacgtcg agtgcggcgg ggtccagcag
     1021 ggtgctgttg gcaatgaggt agtcacggcg ctgagtgaca tcggcaccca tgagaatctc
     1081 gaaaaggttt gccgcgtcgg ccgccgcctt gccgtcctcc atggtgagcc gcttgaggac
     1141 ccgggtttcc ggatcgagcg cacactcggc aagctcctcg acgttcatct cacccagacc
     1201 tttgaagcgg ttccaccgga ggttctcgac gttgcgtcca ccctttgcca gcgatgccgt
     1261 gatctcgtcg cgctcctcat cggtgaacgc ccggtggacg gtgtcgccga cccggagtga
     1321 gtacagcggt ggctgggcgg caaagacccg accttcggtg aggagaggac acatgtactt
     1381 gtggatgagg gtgaggagca ggcatcggat gtggctgccg tccacgtcgg cgtcgcagag
     1441 gatgacgatg cgtccgtagc gcgccgcgtc aatatcaaag tcgttacccg atcccgcccc
     1501 gatggctgtg aagagggcct gggcctcagc gttgtcgagg acctgcttga gggtggcctt
     1561 cccggcgttc accaccttgc ctcgcagggg aagaatggct gtgttcgccg agtttcgacc
     1621 tgccttcgct ggtccggcgg ccgagtcgcc ctccacgatg atgagttcgg agtccgggcc
     1681 gtgagtccgg cagtcggcca acttgtcggg catcccggtc gaacccatgc tggcagcctt
     1741 gcggcgggtc tccagcatct gcttggacgt cacccggttg atcaccgcgt tggtcaactt
     1801 gtcgcgcacc gcgttgatgt gggtcttggg cccgccaccg ctgaaccagt cggtgaggcc
     1861 gcccttgacc acctcgtaga cgattttctc aacggccggg gttcctagct cctgcttggt
     1921 ctggccccgg aactgtggtt cggggaacac caccttgagc gcagcaacca gaccctcctg
     1981 aacgtcatcc ttggtagccc ggtgcttgtt ctccttggcc agcttggcca gctttcgggt
     2041 gtccttgagg agaacgtcgt tgacggcccg ggtgagtgcc cgatcgaagc ccgccgagtg
     2101 cgtaccaccg tggctggttg gaatggtgtt cacgaacgac tcgacccggg ggtcgtagcc
     2161 cttgacccac cgaagggcga cctcgacggt gcattcccgg tcgacatcgc tcatcttccc
     2221 gttgaccgga acccgttcgg tgaactccga gatgcccgac agggtgatga tctcgcaggc
     2281 gttgtcgccg accgataggt ggtcaacgag gtctgccagg ccgcctcggg acacgaactc
     2341 gaacggctcg gcgccgcctg ctcgtttgtc gactaggacg accttcacgc ccggcacgag
     2401 gaagcacgac tgcacgatcc gttcgcggat ttccttggca tcgacgtggg cgtcctcgtc
     2461 aaagatctcc cggtcgggcc agaagcgtat gcgggtgccc gtcttgttct tggagaggcg
     2521 cttgaccttg gccagatcgt ggctggcctt gaaggccgag ccggagaagt ggccggccac
     2581 tcgttccttg aacgagagtt cgtgggtgtg gccgtcacgg tcgacctgag ccaccagttt
     2641 ggtggacagg gcgttgacca ccgaggcgcc tacaccgtgg aggccacccg atgcgccgta
     2701 ggcgccacca ccgaacttgc ctccggcgtg cagctcggtc aggacgacct ccagcgccga
     2761 gatcttccgc ttggcgtggc ggtcaattgg gatgccccgg ccgtcgtcgg ctacctccac
     2821 ggagtggtcg cggtgcaggg tgatatcgat cttgcgggcg aatccggcgg cagcttcgtc
     2881 gaccgcgttg tcgagcagct cccagaccag gtgcatgagt cccggtccgc cggtgccgcc
     2941 gatgtacatg ccgggccgtt ttcgcacggc atccaacccc tcgagggtct ggatggcatc
     3001 ggcgtcgtag cccgatccct ttgacctgct cttggattgc gcggcggcca ctgtcaccac
     3061 ctcggcggcc cgatggccag gatctgtcgt tccgacgcag cgctcaccag gtcacgcttc
     3121 gtggcctcca acatgagcgg taccggtgtg gggtcgggct tcttcgcgtc gtcgtcgctg
     3181 gtcatgatgg ccagcaggcc gatggtgggc cccacgtggg ccgtgctgag tgaggcgccg
     3241 tcggctaggc gtgagacccg gacaccaata ccgccacgac ccttggcctc tagttcggac
     3301 agcggcgtgg ccttcactga ggagtcgtcg gtgacggtca ccagagtgtc gtcaccgagg
     3361 gcggcggccg cggcgaccac ggtggcccca tcgcggagtt tcatcccggc gacgccgctc
     3421 gcaccccgcc cctggacgct gatgccgtcg actgcggttc gtagtacctg gccgtcggaa
     3481 gccacgaaga ccacgtcgat accgtcggga gcggtgaacg cggcggccac tcgatcgccg
     3541 gccttgagct tcatgatcgt cttcccgcct cgggtttcac gaacctcggc catggtgagg
     3601 cgcttggctg cgccttgggc ggagaccacc acgaggtgtt cgtcaccgtc ggccaccacg
     3661 gtgtggatga tctcgcctcg gtttgtaccg aaggcttggg cggcgccggc tccccgggcc
     3721 cggccctcgc cgtcggccag ttcggcgggc aggacctgca gggcccgacc ctcggacgtg
     3781 accgcggtaa ccgtggacgt ggttcgggtc agcagctggg cgaccagcac gtcgtggcgg
     3841 cccggcgtgg cccgcttggc cccctccgcc ggcagccgcc cgatttgtcc ggaggtggag
     3901 agcgtgacca cgcagggctc gtcgaccaca tcatcggcca cctcgatgga atcgaacacc
     3961 gggaggtcat cagggttcac gatctcggta ctgcgatccc gaccgaactg cttgacggcc
     4021 tcacccaact cgttaagcac cagcgtgcgt tggcgagctt cggactcgag gagcttggtg
     4081 tgcccggcaa tggccgcctc gagctccgcc cgttcgtcct ccaggcgacg gacctctagg
     4141 gcggtgagcc gtttgagcgg catgtccagg atgtggtcgg tctggacgcg gctgagcgag
     4201 aaccgttcca tgagggcgtc gcgggctgtc gccgtgtcct ccgaaccacg gatgatggtg
     4261 accacctcgt cgatggcttg gagggccacc agcaggccgg ccacgatgtg aagccgctcc
     4321 tcggcacgat cccgacggta ggccgtccgg cggacgacga cctcgagccg gtggtcgatg
     4381 tagtggcggc acaggtcgta caggccgacg gtgcggggtt cgccatcgac cagcaccacg
     4441 ttgttgatgc cgaaggactc ttccatggga gtcaggcggt acagctcgcc aagcaccgct
     4501 tgggggttgt gccccggctt gaccgtgacc tggagtcgga gcccggtgtg acggtccgag
     4561 aggttcttga aatcggcgat ccccgccacc ttcccggctt cgtttaactc cttgagcttg
     4621 ctgattaccc gctcggggcc caccaagtag ggcaactcgg tgaccacgat ggcctggcgg
     4681 cccttcccgg cttcctcgac gtgggcccgg gcgcggatcc ggatcgaacc ccggccggag
     4741 gcgtaggcgt cgcggatgcc gtcgtcgacc acgatgcccc cactggggaa gtccggaccg
     4801 gggaggacgg ccagcaactc gtcgaccgtc ggcttgggtc gtcgctgctt catgacgaga
     4861 gtgaccgcgg catggatctc ggccaggttg tgggtgggca tgttggtggc cattcccacg
     4921 gcgatcccgg tggtgccgtt caacaacagg ttggggagca gcgcggggag gtgggtgggt
     4981 tcggtggact cgccgtcgta ggtcggtcgg aagcccaccg tgtcctcatc gagctcgcgg
     5041 accatggcca tggcggcttc gctgagccgg cactcggtgt agcggggtgc ggccggcggg
     5101 tcgtccagcg aaccgaagtt gccctggggg tcgatcagag tcatgccccg ggagaatgac
     5161 tggcccatgc gaaccagggc gtcgtagatc gccgagtcgc cgtgcgggtg gtatcgaccc
     5221 atggtgtcgc cgaccacccg ggcacttttg cggtgcgggg tatcgggccg gatgcccatg
     5281 cggagcatgg agtagaggat tcggcgttgc accggcttga gcccgtcacg aatgtcgggg
     5341 atggcccgcg acgtgataac cgacaaggag taggcgagga aggactcctt catctcctgc
     5401 gcgacggaga catcgacgat ctcgcgggcg tagtccatct cgtcgggtat gagcttctgc
     5461 tgcttgccca tgggtgcggt cggtgatcct ggtctgtttg gtcgacgggc agtctgtcgt
     5521 aggggtgtga cagcgattgg tggcccgctg gcgaccgtac aggcgcgggc ccggtgggcc
     5581 gcggcagaag gaggctgagg tcagttcagc cgcggacgcg gcagcgggtg acgccggtga
     5641 caagctcgtc gagggcatcc aagagtgcag acccgccgac cgagcggagc cgggcggctt
     5701 caccggccgt ccacgggtgg tcgatgtgat ccggtgtgag gccggcctga caccaggttt
     5761 caccaaccat ccggagggca tggtccaccc cggggtcacc gcaggccacg agcagagcac
     5821 cggcttcgtc ggcgttgagg ccgggtggtg aatcgacccg ggcggagaac gttcccagac
     5881 gaaaacggag ggcttccgtg gcgatgcggg cgtggttcat cacctctgaa aatacccgtt
     5941 ccgggcgggc tgttcgggga tgtctccggt cgaggagcgg cgcagggtca gtgagggggc
     6001 ggcagacagc agtcggttcg gcaggtccgg accgacgccg ggtcgtgtcc cagaaacagg
     6061 tcgacgacca tgtctatgaa gcgcgggtcg tcatcaatcg cgccggcccg ctggaaggcc
     6121 acgccggccc gttcagctcg ggcggcggcc tccacgtcga ggtcccagac gatctcgaag
     6181 ttctctactg ggaaaccgat gggcgagacc accacggcat ccacaccggc cactgccaga
     6241 gcatcgatcc ggtcgcccac gtcgggttcc agccatgagg tctggggtga accgcttcgg
     6301 gactgccaaa ccagttcgcg gttgtagcga ccggctggat ccacccgctg ggcaaccagc
     6361 cgggctacct cgtgaagttg ggctacgtag tcgcagttgg cggccatggt gctcgggatg
     6421 ctgtgggctg aaaagaggag gtgcgcccgg tcgcgacggt cggcaggcag tcggtcgagc
     6481 gcctcggcga gtcgatccgc tgccggttcg atcagacccg ggtgatcgtg gtggctacca
     6541 atacggtcga caaccggggc gtcggccccc acggcggtct gggccgtctc gatgttctcg
     6601 atgtactggc ggcaagtgct gtaggaggcg tagggcgacg ccacccaggc caccgcccgg
     6661 cgcacgccgg cgtcgcgcat ctcggcgatg gtgtcgacca gcaggggagc ggcgttgcgg
     6721 ttcccccaga agaccggcgt gttgacacca cggtcgacca gtcgctccgc caccctcgcc
     6781 tgcagggttc gcaaccttgc gtttagcggc gaacggccac cgacggagcg gtagcggtcg
     6841 gcaacctggg ccagtcgttc cggggggaat gggtcgtcca gccgtgaccc gggccaggaa
     6901 tggatccacg tcgtcgatcg actccggtcc cccgaaggcc acgagcagca gtgcttcgta
     6961 ctctccggaa tcgtcgatca tcgggtaacc cctgggttcg ggttcgaggc ctcagccctc
     7021 gactacgaag tgcgacaggt cctcggccaa cccggagcgg acagcatcgg caatcacgcc
     7081 gcgggtggta atgcgggtgc gcttcatcgc accgcggccg actccgccgg cgacccgggc
     7141 gtgggccacc gcagtgtcga ggagatcctc ggcattgacc acctcatcca ggtagcccgc
     7201 gtcgattgcc gtctcggggt cgtacatctg acccagagtc gcccttgcca catggcgctt
     7261 ggacaggcga tcccgcatca actcggtggc gaagaagggg agcggcatac cgatggtcaa
     7321 ttcgggcatg ccgatcttga actcgccggc cgtaccgacc cggaggtccg acgacatcag
     7381 gatgatggca cccgccgcga tggcatgtcc ggtgcaggcc acgacgaccg gtcgggggaa
     7441 ctggtagatc cggaggaaca catcgacgcc ggcggccagc atctccttag gtccgttgcc
     7501 accggccttc atgaccgata gatcgaagcc ggccgagaac cggccaggtc gaccgacgat
     7561 gaccaccgcg tcggcaccgg aggcatccac ctcgtccagc gcagccagaa gcgcgcctag
     7621 aaggtcgtgg cccagtgcgt tggccttgcc gtcgtccatg gtgatgaccg ctacgcctgc
     7681 gtcggtcggg ccgtccgtgt actggatggt cactggagtc ggggtcgtct cgtcgctcat
     7741 ggcggcgaac ctactggtgg aggctgatgg tcgtcccaac cggccagcca gatgacggcc
     7801 cgccagagaa aagccaccgg taccattgcc ccatgggcga cattctcacc acggaacggg
     7861 tcatggaggt cagcgacggt gcgctgaaca aggtgctgga ggtccgcgac tcgcaggacg
     7921 acggcgaaga ccccaccacg ctgtccctcc tgatcgacgt gaccggcgtg tcaggcgtgg
     7981 actacgtcta tgacctggcc ttcgtcccaa tcgtcgagtt gcccgacgat tgtcaccgct
     8041 ggacggtcag tgcagacgct gatggaaaga ccggcgcgac cctcgacatg gcggtgggtg
     8101 atgagagtcg ctccaagttg gctggcgcca ccctcgacct gcccagtaac ccggtgcagg
     8161 gcgggctggt gatccgtaac cccaaccgtc ccaacccgtt gggggacgtg ggtgagttgg
     8221 agttgaccgg tgaggtgccc gagcgcatcg agcaactcct cgagaagacg gttaatccga
     8281 tgctggcctc ccacggtggt ttcgcgaccc tcatcggggt cgatacccac acggcgtacg
     8341 tgacaatggg tggcggctgc cagggttgtt cgatgagcca ggccaccctc accgagggga
     8401 tccagcgggc cattgtcgag gccgtgccgg agatcaccga tgtggtggac gccaccgatc
     8461 actcggcggg cgacaacccc ttctattcct gaatcgctgc tccgtaccgg cgtcggaatg
     8521 gccggtcctg agaggttccg ctgggcttag ccgaggcgga aacggacgga agcggctacg
     8581 ccgggaccgt cgaggccaaa cgacgccagc agcgcgtcgg ccggaccgtg ggcgtggtgg
     8641 gccaccggta cgcctagtac agcgacacgc ggcatcggcg tttcggcccg tggcggccgc
     8701 gccgccaggg catccagcac cccggtgccg aatccgccct cacggaatcc gtcctcgatg
     8761 gtgaccacga gccggtgttc ggcagcgttg tccagcattt tctcgtcgag tggccggatg
     8821 caccgcggat cccacacggt ggcgtcgatg ccgtcggtgg ccagttcgtc ggccgcggcc
     8881 agggcggcgg ccagcatctt cccggcaccc agcaggcaca cctgaccgtc cccggctcga
     8941 acttggcggg cggccagacc ccgtcccacc tcgtcccagc ctacgtgggg ggccggcgtc
     9001 ttggaccagc ggatggccac cgggccgtcg gtgatggcca tcgtgtcctc gaacatctgc
     9061 tgcagctcct gataggagga cggggccagc accgtcatcc ccggcacccg ggacaacaag
     9121 accatgtcca gcaccccgtg gtgcgagggg ccgtcgtcgc ctgtgatgcc cgcccggtcc
     9181 agacagaaca cgaccgggag gccgtggagg ccgacgtcaa ggttggtctg atcgaaggcc
     9241 cggctcagga acgtggcgta cagggcgatc actgggcgaa ggccgcccat ggccatgccg
     9301 gctgccgcgg tcaccgcgtg ctgttctgcg atgcccacgt cgaaacagcg gtcggggaaa
     9361 cggtcgcgga acggaaggag gcctgtggaa tcaggcatcg ccgcggtgat ggcgaccaac
     9421 tccgggtggg actcggcggc cttgaggagc gattcggtaa acgcttcggt gtagctgccg
     9481 ggcttcacgc cacccgtgtc gtgcatgtgt ttgatcggat cctgttcggc tggggcgtgg
     9541 cctcgaccct tctgggtcag cacgtggacc acgaccggtc cgtcgaactc ggcagcgttg
     9601 gtcagggcgt cttcgacctc ggcgatgttg tggccgtcga acgggcccag atagtggacg
     9661 ccaagcgcct cgaagaacgc cgtcggctcg aacatctcgc gcagcgcggc cttggtggca
     9721 ttgatgcccc gctcgattag atcgcccacc cacggcaggc gttcggccag gtcctcaagg
     9781 tggcgctgtc ggcgcatgta ggtcgggttg gaacggattc ggatgaggct ctccgacagg
     9841 cgaccgaccg tgggggcgta ggaccgcccg ttgtcgttga gcaccacggt tactggcagg
     9901 ccgctgtggc cgagattgtt gagaccctcg aaggccatgc cgccggtcat cgaaccatcg
     9961 ccgatcaccg ccacgacccg tcggcggtcg ctgttggtgg cccgtgccgt ggccaggccg
    10021 tgggcgtatg acagcacggt cgacgcgtgg gagttctcga tccagtcgtg ggccgattca
    10081 tctcgggacg catagcccga catctgcccg gcctggcgta gtccgtcgaa ctcggagacc
    10141 cgtccggtca ggagtttgtg gacgtaggtc tggtggccgg tgtcgaagag gatggcgtcc
    10201 cttggactat cgaaaacccg gtggagagcc aaggtgagct ccaccgcgcc cagattcgaa
    10261 ccaaggtggc cgccggtgcg gtccacggtg tcgatgatgc gttggcgcaa ttccgtggcc
    10321 agcgcggcga gttcctctgg gccaaggtcg cggaggtcgg cgggggaccg aagggcatcg
    10381 aggcgcacga cggaaaacgc tatcgcggcc cagccgaacc ggttcagcgg ggccggttca
    10441 gttagcgcgc aaccggtggt ggagtcggat ccaggcccgg accagcacgc cggccagcag
    10501 cgtgccggca cccagggcca ccagccctcc agcggcgtcc aaccagaagt ggttgccggt
    10561 gacgatcacg gcgaacagtg tggccaccgg gtaggcgacg gccagcgccc tgacggcgcg
    10621 tgtccggacc gttggccaga tgaccagcgc acaccacgtg gcccaggcga agtgaaggct
    10681 gggcatcgcc gcgtactggt tgctaacgcg ttgcattgtc cccgagtcga acgaccagag
    10741 cccgccgacg tcggtcaccg tgtcgacgta gggatgcatg tgggccagac aggccccaaa
    10801 cgtcccgcag tctgaaagca gccgtggtgg catgagcgga aatagggcaa aaccgatcag
    10861 ggccagcccc gtcgtacaca ggaaggtcga gcggtggcgc gcatacaggt gcgggaagcg
    10921 ccggtacacc cagaccagag cgaacaccgt caccgcgaag tgaaacgtcc cgtagaagag
    10981 gttccagaac tggatgaacc accggtggtc gaggaaagcc tgttggattt ccagttcccg
    11041 gtagaggccg atcgatcgtt ccaggtcgat aatccgttcg gcattggcca gcgcgtcggc
    11101 caccgacacg gactcggatc cgaagaggtt ccggatggtg gagtagacgg cgtagaagcc
    11161 gaagacgagg aggatctcaa cccaccagtg gagtccgctg cccggcccgg ctgcacgccg
    11221 gggaaaccga actagacccg cgccgggcac cgtttcgtca tgttgtgatg cgggctgggc
    11281 cctcgcggga acgatttgca cggttcaggt gaggtctccg ttgaccctgt cgaggaaccg
    11341 gtgggtctcg acgaccactc ggatgatgct tgctgtggcc accacggcgt cgcccaccgt
    11401 ggccgtcgcc ccgaaggtaa gacggcgccc ttcgacgcct tcgaggaccg cctcggcggt
    11461 gacgccgacg ccaggtgcgg tgggggccat gtggtcgacg tggatgcgca tacccacgct
    11521 ggtctcgcca tcggccagcg agccgtcgag tgcctcgacc gaggcttcct ccattagggc
    11581 caccagtcgt ggggtgccga ggaccggtac ttcgccggag cggagggcga tcgccgtgtc
    11641 ggcatcggtg acggtgtggg aggcgcgacc gcgcaaccct ggcatcgggg gcacagcggt
    11701 accctacgca tccgcccggg cccgaccggg acaccggccc ggaccgggcg cacaggatca
    11761 ggagcatgat gatggctgac ggcaacggtt cttccggcat accggatacc gggagattgg
    11821 aaacgggcct tctggattcg ggtctgctgg ccgacacgct ctcggtcgcc atggcaacag
    11881 gtggcgagtt tgccgaggtg ttcgtggagg atcggcggtc cacctcggcg gtgctcgacg
    11941 acggtcggat tg
//
LOCUS       DASCMR010000214         2039 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001041294, whole genome shotgun sequence.
ACCESSION   DASCMR010000214 DASCMR010000000
VERSION     DASCMR010000214.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2039)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2039)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2039
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001041294"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..815)
                     /locus_tag="QGG16_05190"
     CDS             complement(<1..815)
                     /locus_tag="QGG16_05190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004748 - ribonucleoside-diphosphate
                     reductase activity, thioredoxin disulfide as acceptor
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide reductase N-terminal alpha
                     domain-containing protein"
                     /protein_id="HJP24701.1"
                     /translation="MALTDERIGDTDVESTENSSTTMRVRKRNGDLEAVDVNKIVRAV
                     ERCADGLPGVDPMRVATRTISGLCDGATTEELDELSIRTSAAFIVEEPNYSRLAARLL
                     ATVVDKEVRNQDIHSFSQSVAMGVEQGLIGTEVAEFVATNARKLNDTIEDERDHLFEF
                     FGLRTVYDRYLLRHPENRMVVETPQYFFLRVACGLSTCPDEAIRFYRLISSLAYLPSS
                     PTLFNSGTSHPQMSSCYLLDSPEDSLDGIYKRYTDIAKLSKFAGGIGVAWHRIR"
     gene            1157..>2039
                     /locus_tag="QGG16_05195"
     CDS             1157..>2039
                     /locus_tag="QGG16_05195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate and iron-dependent oxygenase
                     domain-containing protein"
                     /protein_id="HJP24702.1"
                     /translation="MSHSTPILDVDLAAFENGDEATRRAVVDGTMRSLTTGFVYVRHD
                     LSENLLDEAYGRLADFFALPRDRKDRYTVPGANGQTGYTGLLVETAAISDVPDWKEML
                     NWSAPVPEGHPLRKRFPHRYGEQVLPDEDLPGITELLTAFHEATLGLQRRVLRILAAG
                     LGVHENYFDVMLNDGAALTRALHYPSMDAAPGDEHVWAAEHGDINLITALPRATAPGL
                     QVKVGDSWVDASPPDGHVIINTGIMLDHLTNGVIPPGIHRVVANGPGERHSVVQFCHP
                     TPWTMLAPISTCVTPDNP"
BASE COUNT          339 a          645 c          668 g          387 t
ORIGIN      
        1 cggatgcggt gccacgccac accgatgccg ccggcgaact tcgagagctt ggcgatgtcg
       61 gtgtaacgct tgtagatgcc gtcgaggctg tcctcgggcg agtccagcag gtagcaactg
      121 gacatctgcg ggtgactggt gcccgagttg aagagtgtgg ggctggacgg taggtacgcc
      181 agcgacgaga tgagccggta gaagcggatg gcctcgtcgg ggcaggtcga tagaccgcag
      241 gccacacgca ggaagaagta ctgcggggtc tcgacgacca tgcggttctc cgggtggcgc
      301 aggaggtacc ggtcgtagac ggtgcgaagt ccgaagaact cgaacaggtg atcgcgctcg
      361 tcctcaatgg tgtcgttcaa cttgcgagca ttggtggcta cgaactcggc cacctcggta
      421 ccgatgaggc cctgctcgac gcccatggcc accgactgtg agaaggagtg gatgtcctgg
      481 ttgcggacct ccttgtcgac caccgtggcc agcaggcggg cggccagacg agagtagttg
      541 ggctcctcga cgatgaaggc cgccgaggtc cggatcgaca actcgtcgag ctcctcggtg
      601 gtggcgccgt cgcacaggcc cgagatggtc ctagtggcca cccgcatcgg atcgacgccc
      661 ggtaggccat cggcacaccg ttccacggct cgcacgatct tgttgacgtc gaccgcttcc
      721 aggtcgccgt tgcgcttccg cacccgcatg gtggtgctgg agttctcggt cgattcgacg
      781 tccgtgtcgc cgatccgttc atccgtgagt gccatctcgt gtcctcttcc ccggttcccg
      841 ccggtcgtct cctgaaccct ccaccgttgc cggtgacctg tcccctcgtt gttcgggtga
      901 tggaccgtgg cctcccatct tgtaaccgtc ccggttgctc gggtcggtag agggcgagtc
      961 gggtacttcc tcccgggact tgaattgcac gcatgtaact acaaccatgt caagttattc
     1021 gtgcggcccg ggcaggattt cttgagagtc gcgccacggg tggtcgggaa aggatgaata
     1081 ccgggtgtat tcgcgctccg agtggtcgac gcccagcggc ggccggtagg ccgcagtccg
     1141 gcctagcgtg ttgctcgtga gccactccac ccccatcctc gacgttgacc tcgctgcatt
     1201 cgagaacggt gacgaggcaa cccggcgagc ggtggttgac gggacgatgc ggagcctgac
     1261 taccggcttc gtctacgtgc gccacgacct ctccgagaat cttctggatg aggcttacgg
     1321 tcgtctggcc gacttctttg ccctgccccg ggatcgcaag gaccgctaca cggtgcctgg
     1381 cgccaacggc cagaccgggt acaccggcct cctcgtggag acggcggcca tctccgacgt
     1441 gcccgactgg aaggagatgc tcaactggag tgccccggtt cccgaggggc atccgttgag
     1501 gaagcgcttc ccccatcggt atggcgaaca ggtgctccca gatgaggatc tgccgggcat
     1561 taccgaactg ctaacggcgt tccacgaggc cacgctcggc ctgcagcgtc gggtgttgcg
     1621 aatcctggcc gcaggtctcg gtgtccacga gaactacttc gacgtgatgc tgaacgatgg
     1681 tgccgcactg acccgggctc tgcattaccc gtccatggac gccgcccccg gcgatgagca
     1741 cgtgtgggcg gccgagcatg gcgacatcaa cctcatcacc gcgctgccgc gggccacggc
     1801 tcccggtcta caggtcaagg ttggcgattc ttgggtggat gcttcgccgc cggacggaca
     1861 cgtcatcatc aacaccggga tcatgctgga tcacctgacc aacggggtga tcccgccggg
     1921 catccaccgg gtagtggcca acggcccggg cgaacgtcat tcggtggtgc agttctgcca
     1981 ccccacgccg tggaccatgc tggcgcccat ctcgacatgc gtgacgccgg ataatccgc
//
LOCUS       DASCMR010000215         2085 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001043005, whole genome shotgun sequence.
ACCESSION   DASCMR010000215 DASCMR010000000
VERSION     DASCMR010000215.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2085)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2085)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2085
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001043005"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..510)
                     /locus_tag="QGG16_05200"
     CDS             complement(<1..510)
                     /locus_tag="QGG16_05200"
                     /inference="COORDINATES: protein motif:HMM:NF013630.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysM domain-containing protein"
                     /protein_id="HJP24703.1"
                     /translation="MGFPFRVAAPTGGIGLLLVVAVSACGGGGGAAPPATTVGELFAG
                     SATTTTVGGLSVAGWTHRDLPEMRTALDACVASVDVRGASTDEEEGPRTVTVESGDSL
                     GKIAARFDRTVDQFMRANGISDPNRLQVGQILVVPAQRLETEPEYDGPTVLLEPVYCE
                     VDTGVPAFGP"
     gene            694..1836
                     /locus_tag="QGG16_05205"
     CDS             694..1836
                     /locus_tag="QGG16_05205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24704.1"
                     /translation="MRPPTRSLVGCVLLSGVLGSIHAYSLFIESFESDLGVGRGEAGA
                     PYSVALASLTVVVLVSHLLFRLVPGPLVVLIASGGAAIGLLLAASANSLAGVVLGYGV
                     VFGAFNGLGYAFSLQRASESNPDRRGFALGLVTAAYALGGASTALVLDKQVAASGATS
                     GLRWLAVAIAVTGIVTSVLLTNNDSPVHGSPARLSSANLRILAPLWTAYLLAVLAGLM
                     ALGHAAAIVDDAGGPGGAAVVAAGLASASGGLWIALVADRTATDRLLRLLPLGSAVVL
                     VIAAVVSHGVVLMVSVAGIAFTYGALIAIYPLAVAQRFGQDGYSRAYGRVFTAWGTAG
                     LVGPVGAGHLFEVTGSYRIPMFMAAVAAIGSAVVARQLSVDKKWDS"
BASE COUNT          342 a          706 c          625 g          412 t
ORIGIN      
        1 aggaccgaat gctggaacgc ccgtatctac ctcgcagtag acgggctcga gaagcaccgt
       61 tgggccgtcg tattcgggct cggtctcgag tcgctgggcc gggacaacca ggatctgacc
      121 gacctgaagg cgattcggat ccgatattcc gttggcccgc atgaactggt ccacggtccg
      181 atcgaagcgt gccgcgatct tgccgagact gtcgcccgat tcgacggtca ccgtccgggg
      241 cccctcctcc tcgtccgtcg aagccccccg cacgtcgacc gaggcgacac aggcatccag
      301 tgctgtacgc atctccggca ggtcacggtg agtccatccg gccacggaga ggccccccac
      361 cgtcgtggtg gttgccgaac cggcgaacag ttcacccact gtcgtggccg gcggcgccgc
      421 tcctcctccg ccgccacagg ccgatactgc gacgacgagc agcaagccga tgccgcctgt
      481 cggagcggct acccggaagg gaaatcccat aggtcgtcga tggtaggggc agcgtgacag
      541 gtgaaatgcc gcggactgaa cccaaccaga tgtctagccg gacgtcagcc gggccccaga
      601 tggcccatga cgatgccggt gcggtagcca catgggcgcc gaggtcacca tcagcgccat
      661 ttgacaccgg cacccggcgt aaagtcgcgg gcaatgcgac cgccgacccg ctcgcttgtg
      721 ggatgcgtgc tcctgagcgg tgttctcgga agcatccacg cgtacagcct gttcatcgag
      781 tccttcgagt ccgatctcgg cgttggacgc ggcgaggcgg gtgcccccta ctccgtagcc
      841 ctggccagcc tcaccgtcgt tgtattagtc agccacctgt tgttccggct agtaccaggc
      901 cctctggttg tcctgatcgc ttcaggaggg gctgccatcg gactgctgct tgctgcgtca
      961 gccaactccc tggctggcgt tgtccttggg tacggcgttg tcttcggtgc gtttaacggc
     1021 ctcggctacg ccttctcgct ccagcgggcc tctgagtcga acccggaccg tcgcggattc
     1081 gccctcggcc ttgtcactgc ggcctacgcc ctcggtggcg catccaccgc gctggtcctc
     1141 gacaagcagg tcgctgcaag tggcgctacc agtggccttc gctggctcgc cgttgccata
     1201 gctgtgaccg ggatcgtcac ctctgtccta ctcaccaaca acgactctcc ggtacatgga
     1261 tcgcccgctc gcctctcgag tgcgaatctg cgcatactcg cgcctctctg gacggcctac
     1321 ctgctcgctg tgcttgccgg tctgatggca ctcggacatg ccgctgccat cgttgacgac
     1381 gctggtggcc caggtggcgc cgctgtcgtg gccgccggac tggcaagcgc ttcaggaggc
     1441 ctatggatcg cgcttgtcgc cgaccgaacg gcgacggacc gtctgctacg cctactgcca
     1501 ctcggatcgg ccgttgtgct cgtcatcgct gccgtggtgt ctcatggtgt cgtcctgatg
     1561 gtctccgtag ccgggattgc tttcacctac ggagcgctaa tagctatcta ccctctcgct
     1621 gttgcccaga gattcggtca ggacggttac tcccgggcct acggccgcgt cttcaccgcc
     1681 tggggaactg ctggtttagt cgggcccgtg ggggccggcc atctattcga agtgaccggt
     1741 tcctaccgga tccccatgtt tatggccgct gtagcggcca taggttcagc tgtcgtcgct
     1801 cgacagttat ccgtcgacaa gaagtgggac tcctagtaga tcgccatcag ttcggcgatg
     1861 acgaccagag ccagaatgac gaagacgact tcacgcatca ttcagaacgg agccaccgcg
     1921 tagttccgga ccaggttgct cgacgcaacc tcgccatcca cgccccttgg ttcgacggcg
     1981 aaaccgttaa agcaacggtt tcagggcatc acacggtcag tgacgtccac caagtcggca
     2041 tccacccatc ccgcggcaac caactcatcc acaatggcca ctgcg
//
LOCUS       DASCMR010000216         2895 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001043334, whole genome shotgun sequence.
ACCESSION   DASCMR010000216 DASCMR010000000
VERSION     DASCMR010000216.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2895)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2895)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2895
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001043334"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1017)
                     /locus_tag="QGG16_05210"
     CDS             complement(<1..1017)
                     /locus_tag="QGG16_05210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA acetyltransferase"
                     /protein_id="HJP24705.1"
                     /translation="MASHGILDRVAIVGMGCTPFREHWDRSLDDLLIDAHGLALNSAG
                     IVKDDVDAYWYGTSQSSASGISLAMPLRLENRPVTRVENYCATGSEALRQACYAVASG
                     AYDVAVAIGGEKVKDGGYQGLNAFPIPTDGTNRTLTAAAMFSLMLPAYAERYGVDEEK
                     LRYVVAKIAEKNHFNGARNDLAQFRREMSAEAICEMAAVAGRLSVFDCAGVADGAAAA
                     VVVPAERATDYTDAPLYVKALSLVAGNGSGLVDPAFDFTTLPECAEAADDAYAQAGIT
                     DPRTELAMAEVHDCFTPTELILMEDLGFSERGEGWSDVLDGRFALDGDLPVNTDGGLK
                     SFGHP"
     gene            complement(1042..2448)
                     /locus_tag="QGG16_05215"
     CDS             complement(1042..2448)
                     /locus_tag="QGG16_05215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HJP24706.1"
                     /translation="MSMTRGILAYGAHVPYRRLDRAEIASVMGAGGGRGHRAVASFDE
                     DTTTMGVAAARRALRALDNTTPDALWFSTVAPAYSDKTNATVMHAALRLDSTISALDF
                     GGAQRSAVGALRAALTAPGRTLVVASDIRIGLPTGPEDGGGGDAATAILTGSSDDGPL
                     LAEYLGGATATGEFTDRWRTPGNAHSRTWEDRFGEQAYLPLVRKAWADALAATGLTVD
                     DVDIAVVTGLHGRATKKAASGLGVAVADDRADTVGNAGAAHPSLLLADVLDGAEAGAV
                     VALVVLADGCEVLLFRTTDALASGRPTRSVAAQVDNRTDVAYTRYLTWRGLLEIQPPN
                     RPEPNRPSSAASLRRTDWKHGFVGATDRTTGITHLPPSRVGIAGGAVDDMDPAPMADA
                     TGTIATFTVDHLVYSQSPPVVFAVVDFDGGGRMPIELTDADPAEVAIGDRVEMTFRRM
                     FTADGLHNYFWKAQPARG"
     gene            2518..>2895
                     /locus_tag="QGG16_05220"
     CDS             2518..>2895
                     /locus_tag="QGG16_05220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP24707.1"
                     /translation="MDFDFTTEQEAFRAEVEAFLDANDDPEVFDPTRENMAQIVDTPK
                     RRALMKKMGEEGWLGITWPKEYGGQEGEGVYEYILNEALAARGGPQIGKGVGIIGKTL
                     IAHGSEFLKEEFLPKILANEVEFA"
BASE COUNT          503 a          947 c          974 g          471 t
ORIGIN      
        1 cggatggcca aagctcttaa gcccgccgtc ggtgttgacc ggtaggtccc cgtcgagggc
       61 gaaccggccg tccagcacgt cgctccaacc ctcgcctcgt tcgctgaacc cgagatcctc
      121 catgagtatc agttcagtcg gggtgaagca gtcgtgcacc tcagccatgg ccagttcggt
      181 ccgcggatca gtgatccctg cctgggcgta ggcgtcatcg gcagcctccg cgcactcggg
      241 cagtgtggtg aagtcgaacg ccgggtccac gagacccgac ccgttaccgg ccaccagcga
      301 gagggccttc acgtacagcg gggcatcggt gtagtccgtc gcccgttccg cgggcaccac
      361 gacggctgct gccgctccgt cggctacacc ggcacagtcg aacaccgaca ggcgaccggc
      421 cactgcggcc atctcgcaga tggcctcagc cgacatttcc cgtcggaact gggccagatc
      481 gttgcgagct ccgttgaagt ggttcttctc ggcgatcttg gccaccacat agcgaagctt
      541 ttcctcgtcg actccgtaac gctcggcgta ggcgggcagc atcaggctga acatggccgc
      601 ggcggtgagg gttcgattgg tcccgtctgt gggaatcggg aaggcgttga ggccctggta
      661 gccgccatcc ttgaccttct cgccgccaat ggcgacggcc acgtcgtagg cgcccgacgc
      721 cacggcgtaa caggcctggc gtagggcttc ggaccccgtg gcgcagtagt tctccacccg
      781 ggtgaccgga cggttctcga ggcgaagcgg catggccagt gagatgcccg aggccgacga
      841 ctgcgacgtg ccgtaccagt aggcatcgac gtcgtccttg actatgcccg ccgaattcag
      901 ggccaggccg tgggcgtcga tgagcaggtc gtccaacgag cggtcccagt gttcgcgaaa
      961 cggagtgcac cccatcccga cgatggccac tcgatccagg atcccgtgtg atgccatgtg
     1021 cgcgctcctc tccgctgcgg gtcagccccg agcgggctgg gccttccaga aatagttgtg
     1081 caacccatcg gccgtgaaca tccgacggaa cgtcatctcc acccggtcac caatggccac
     1141 ctcggctggg tcggcgtcgg tgagttcgat gggcatgcga ccgccaccgt caaagtcgac
     1201 cactgcgaaa accaccggtg ggctctgtga gtagacgagg tggtccacgg tgaaggtggc
     1261 gatggtgccc gtggcgtcgg ccatgggagc cgggtccatg tcgtcgaccg ctccaccggc
     1321 gatgccgaca cgactgggcg gcaggtgggt gattccggtg gtccggtcgg ttgctccgac
     1381 gaagccgtgc ttccagtcgg tccgccgaag ggaagctgcc gaggagggtc ggttgggttc
     1441 gggccggttg gggggctgga tctccagcaa gccccgccac gtcaggtagc gggtgtaggc
     1501 gacgtcggtc cgattgtcga cctgagcggc caccgatcgg gtcggccggc cggaggccag
     1561 cgcatcggtg gtccgaaata acaaaacctc gcacccgtcg gccagtacca cgagggcaac
     1621 cacggcgccg gcttcggccc cgtccagcac gtcggctagg aggagagagg gatgagcagc
     1681 tccagcgttt ccgacggtat ccgcccggtc gtcagccacg gccacgccga ggccggacgc
     1741 ggccttcttg gtggcccgac catgcaatcc ggtgaccacg gcgatatcga cgtcatcgac
     1801 ggtgagaccg gtggcggcta gggcatcagc ccaggccttt cgtacgagag gtaggtaggc
     1861 ctgctcaccg aaacggtcct cccaagtacg cgaatgggcg tttcccgggg ttcgccagcg
     1921 gtcggtgaac tcaccggtgg ccgtggcccc accgaggtac tcggccagca gcggaccgtc
     1981 gtcggatgat ccggtgagga tggccgtcgc tgcgtcacca cccccgccgt cctcggggcc
     2041 ggtcggcagg ccgatccgga tatcggaggc cacgaccagg gtccggcccg gagcagtcag
     2101 ggcggcacgc agggcgccca cagcggagcg ctgggcgccc ccgaagtcca atgcggagat
     2161 cgtggagtcg agtcggaggg cggcgtgcat caccgtggcg ttggtcttgt cggaatacgc
     2221 cggagcaacc gtcgaaaacc agagagcgtc cggcgttgtg ttgtcgagcg cccgcagcgc
     2281 ccggcgggcc gccgccacac ccatggtcgt ggtgtcctcg tcgaaggagg cgacggcacg
     2341 atgaccccta ccaccccctg ctcccatgac cgatgcgatc tcggcccggt cgagacgccg
     2401 gtacggcacg tgggcgccgt aggcaaggat tcctctggtc atgctcatgc gtctcccctc
     2461 cgataccgta cagatctgac ggaccgtcag attaccttcc acaagaccgg acgccccatg
     2521 gacttcgatt tcaccaccga acaggaggcc ttccgggccg aggtcgaggc gttcctcgac
     2581 gccaatgacg atcccgaggt attcgacccc acccgggaaa acatggccca gattgtcgac
     2641 acgccgaagc gccgagcgct gatgaagaag atgggcgagg agggctggct aggcatcacc
     2701 tggccgaagg agtacggcgg ccaagagggt gagggcgtct acgagtacat cctgaacgag
     2761 gctctcgccg cgcgtggtgg cccccagatc ggcaagggcg tcggcatcat cggcaagacc
     2821 ctgatcgccc acggctcaga gttcctcaaa gaggaattcc tgcccaagat ccttgccaac
     2881 gaggtggagt tcgcg
//
LOCUS       DASCMR010000217         1815 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001047049, whole genome shotgun sequence.
ACCESSION   DASCMR010000217 DASCMR010000000
VERSION     DASCMR010000217.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1815)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1815)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001047049"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..459)
                     /locus_tag="QGG16_05225"
     CDS             complement(<1..459)
                     /locus_tag="QGG16_05225"
                     /inference="COORDINATES: protein motif:HMM:NF012787.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HJP24708.1"
                     /translation="MPRIPVGLLLMGLFLVGLSASTVGCAEDPETVVDVTSMPFELWT
                     GKTTTLDDLTDSDDRPVVVNLWATWCTPCLKEMPVLQTAHERGSGQVRFVGINVSDSP
                     TRAAQRADELGITYLQGRDPDGEFSAALSTVGLPVTAFVDRGGDLVYVHHG"
     gene            complement(640..978)
                     /locus_tag="QGG16_05230"
     CDS             complement(640..978)
                     /locus_tag="QGG16_05230"
                     /inference="COORDINATES: protein motif:HMM:NF014520.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WhiB family transcriptional regulator"
                     /protein_id="HJP24709.1"
                     /translation="MQETLIYERETWRQQAACERLGVPTAVFFSDDIGDIVQAKNICA
                     ECPVLESCLEGAIRRREPWGVWGGQLFRNGHILATKRRRGRPSNVPRPEEQLPVVPIP
                     LRIQQELLSA"
     gene            complement(1100..1291)
                     /locus_tag="QGG16_05235"
     CDS             complement(1100..1291)
                     /locus_tag="QGG16_05235"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24710.1"
                     /translation="MYELHCHRHGLSTGVHVSSSRLHTAHHSVKPSISWHVDSSTFMN
                     TYRTTGFTKTGQRPRGANS"
     gene            complement(1413..>1815)
                     /locus_tag="QGG16_05240"
     CDS             complement(1413..>1815)
                     /locus_tag="QGG16_05240"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24711.1"
                     /translation="LLSGDHVLPTITPHINGIGPMDDPLATFFRSLERMKELPGLEHV
                     LPAHGHPFTNVAERVDHIIDHHGERLDVIREAGEDMGSGTVEAFMQRLFKERSWGDMA
                     ASETYAHLEHLRILGQATRDEVAGQTMYSTS"
BASE COUNT          309 a          532 c          635 g          339 t
ORIGIN      
        1 cccatggtgg acatagacca gatcgccccc tcggtctacg aaggcggtca ccggcaggcc
       61 gacggtgctg agggctgcgg agaactctcc atcgggatca cgaccctgaa ggtaggtgat
      121 accgagttcg tcggcccgct gggccgcccg ggtgggtgag tcgctgacgt tgatgcctac
      181 gaaccggacc tgcccagaac ccctctcgtg ggcggtctgc aggacgggca tctccttgag
      241 gcacggtgta caccacgtgg cccaaaggtt caccacgacg ggtcgatcgt cgctgtcggt
      301 caggtcgtcc agcgtggtgg tcttcccggt ccagagttcg aagggcatcg aggtcacgtc
      361 gacgacggtc tcagggtcct cggcacagcc gacggtggac gccgacagcc ccacgaggaa
      421 cagccccatg aggagcagac cgacagggat acgaggcacg aacgtcgacg gtaccggccc
      481 accgtggagc gaacatgctg tggcggaatc atggttgcca cacggaccgg ggctcgccga
      541 agcgtcaccc cggtccgtgg tctggcgttc tggtgggccg gcacccggcc ggaggagggg
      601 gaaccggccg ggtgcgggac ctgttttgtg gtggccgcgt caagccgaga gcagctcctg
      661 ctggatgcgc aacgggatgg gcacgacggg cagctgctcc tcggggcgcg gcacattgga
      721 ggggcgaccc cggcgacgct tggtggccag gatgtggccg ttacgaaaca gctgtccgcc
      781 ccacacgccc catggctctc ggcggcggat ggcgccttcg aggcacgact cgagcaccgg
      841 gcattcggcg cagatgttct tggcctgcac gatgtccccg atgtcgtcgc tgaagaagac
      901 cgcggtgggg acgccgaggc gttcacaggc ggcctgttgg cgccaggtct ctcgttcgta
      961 gatcagtgtt tcttgcatgg tctcgctgct ctctgggtcg ctggtcttgg gggagttgga
     1021 tttgaaaacc ggtttgaaaa acgaagaagg ccgccggatt tctccggcgg cctcgggggg
     1081 tggatctgcg ttcagctgat cagctgttcg ctccccgggg ccgctggccg gtcttggtga
     1141 aaccggtggt ccgataggtg ttcatgaacg tcgaggaatc gacatgccac gaaatactcg
     1201 gcttcaccga gtgatgagcc gtatgcaggc gcgacgagga cacgtgcacg ccggtcgaaa
     1261 ggccgtggcg atggcagtga agctcgtaca tggaaactgt cctgtggctg ggtagatggg
     1321 cggcggttgc cacccggtca gacatccacg atagaggcgt ctgaccggtc tccatccgag
     1381 tcgaccgggg ttacctcggt caaatgatta aatcagctgg tcgaatacat tgtctgacct
     1441 gcgacttcgt cccgggtcgc ctggcccagg attcgcaggt gctcgaggtg ggcgtaggtc
     1501 tcgctagccg ccatgtcgcc ccacgaacgc tccttgaaga gtcgttgcat gaaggcttcc
     1561 acggtgcctg atcccatgtc ttcgccggcc tcacggatga cgtcgagacg ttccccgtgg
     1621 tggtcgatga tgtggtccac cctctcggcc acgttggtga acgggtgacc gtgcgccggt
     1681 aggacgtgct ccagcccggg gagctccttc atccgttcca acgagcggaa gaaggtggcc
     1741 aacggatcgt ccattgggcc gatgccgttg atgtgggggg tgatggtagg tagtacgtgg
     1801 tctcccgaga gcagg
//
LOCUS       DASCMR010000218         2391 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001052369, whole genome shotgun sequence.
ACCESSION   DASCMR010000218 DASCMR010000000
VERSION     DASCMR010000218.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2391)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2391)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2391
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001052369"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..379)
                     /locus_tag="QGG16_05245"
     CDS             complement(<1..379)
                     /locus_tag="QGG16_05245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJP24712.1"
                     /translation="MIRLEVVAKVYKGDVVALKNATAEIQRGEFVFLVGPSGSGKSTF
                     IRLLNREEVVDEGRIMVAGKDLGEMSSWRVPYLRRQIGYIFQDYKLLPKKTVYENVAF
                     GLEVIGRPRQVIRTQVPAILELVG"
     gene            complement(506..1615)
                     /gene="prfB"
                     /locus_tag="QGG16_05250"
     CDS             complement(506..1615)
                     /gene="prfB"
                     /locus_tag="QGG16_05250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_153759895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HJP24713.1"
                     /translation="MQNFAPDLASLRTRLDEAAGYLRIAEQAKRRVGLETEMADPELW
                     NDQDRGRRVQKDLASVIEDLDLHAGLTGDIEEAETLVEMAVEEADDSLDGEITAAVAS
                     LGSRFDELELRSLFSGQYDEGDAVCQVQSGAGGTDAQDWAETLLRMYTRWADRRGFAL
                     QVESISEGTEAGISSAEFVVRGRYAFGLLQAERGVHRLVRISPFNKEAKRQTAFASLQ
                     VVPFFDEIVDEIDIDETDLRIDTYRSSGAGGQHVNVTDSAVRITHLPTGVVTSCQNER
                     SQHQNKDKAMQMLAARLLDLERQKRDAELAQIGGEKLIVDFGSQIRSYVLQPYQMVKD
                     LRTDHEVGDVAGVLDGDLDGFMESYLRWSRTNASN"
     gene            complement(1617..>2391)
                     /locus_tag="QGG16_05255"
     CDS             complement(1617..>2391)
                     /locus_tag="QGG16_05255"
                     /inference="COORDINATES: protein motif:HMM:NF019155.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SEC-C metal-binding domain-containing protein"
                     /protein_id="HJP24714.1"
                     /translation="DSALENPAEGPSENDSSGEPSSEGDLRDEVLDALGAVVDGAIEA
                     FCGSDLPEEWDVDGLRVELDSYWPLGDGADAVSAAQSTDELYDLLSADGLAVFERRET
                     ELGADTMREVERQVMLRIIDQRWREHLYEMDHLREGIHLRAIGQRDPATEWKREGFEL
                     FSQLDGLIARDFLRYVMRIQVTAASESGEPEEVMTSGPEGPVTGAAAVAAAAGAPARV
                     EESTPVPQATKVNSEWENTPRNAPCPCGTGRKYKQCHGA"
BASE COUNT          412 a          822 c          709 g          448 t
ORIGIN      
        1 ggcccaccaa ctcgaggatg gccggcacct gggtgcggat gacctggcgg ggacgcccaa
       61 tcacttcgag gccgaaggcc acgttctcgt acaccgtctt cttcggcaga agtttgtagt
      121 cctggaagat gtacccgatc tggcgtcgca ggtacggcac ccgccacgaa ctcatctcgc
      181 cgaggtcttt gccggcgacc attatccgcc cctcgtcgac cacctcttca cggtttagta
      241 accggatgaa ggtcgacttg cccgaacccg acggcccgac caggaagacg aactcgccac
      301 gctggatctc ggcagtggcg ttcttcaggg ccaccacgtc gcccttgtag accttcgcga
      361 cgacctcgag ccggatcatc gaccttcctc cggtcgagtc gcgacaggtc ggatcggtcg
      421 gatcggcacg gcgcgcacgg taccagaggc accctcgccc atcgggtcag cgggccggtc
      481 gacgggttcc ttctgggccg gccagtcagt tgctggcgtt ggtccgtgac cagcggaggt
      541 acgactccat gaagccgtcc aggtcaccgt ccaacacacc ggccacgtcc cccacctcat
      601 ggtcggtccg tagatctttg accatctggt acggctgcaa tacgtaggac cggatctgac
      661 taccgaagtc gacgatcagt ttctcgccgc cgatctgtgc cagttcggcg tcgcgctttt
      721 gacgctccag gtcgagcagg cgcgcggcca gcatctgcat agccttgtct ttgttctggt
      781 gctgactccg ttcgttctgg caggacgtca cgacccccgt cggtaggtgt gtgatccgaa
      841 ctgccgaatc ggtcacgttg acgtgctggc cgccggcacc cgacgaacgg taggtatcga
      901 tgcgaagatc ggtctcatcg atgtcgatct catcgacaat ctcgtcgaag aacggaacga
      961 cctgcagcga ggcaaacgca gtctgccgct tggcctcctt gttaaacggc gagatccgaa
     1021 ctagccgatg gaccccacgt tcggcctgca ggagcccgaa ggcgtagcga ccacgcacta
     1081 caaactccgc cgagctgatg ccggcctcgg tgccttccga gatggactcg acctggaggg
     1141 cgaagccccg ccggtcggcc caccgggtgt acatgcgcag cagggtctca gcccagtcct
     1201 gtgcatcggt cccgcccgct ccggactgca cctgacagac cgcgtcgccc tcgtcgtatt
     1261 ggccactgaa cagcgaccgc agttcgagtt cgtcgaagcg actgcccaga gatgccaccg
     1321 ccgcggtgat ctctccgtcg aggctgtcgt cagcctcctc gacggccatc tcgaccaagg
     1381 tctcagcttc ctcgatatcg ccggtcaggc cggcgtggag gtcgagatcc tcgatgactg
     1441 aggccaggtc cttctggacg cgtcgaccac ggtcctggtc gttccacagc tctgggtccg
     1501 ccatctcggt ctccaggccg acccgacgtt tcgcctgctc ggcgatccgg agatagccgg
     1561 cggcttcgtc gagacgggtc ctcagggagg ccaagtcggg agcaaagttc tgcacgtcag
     1621 gctccgtgac actgcttgta ctttcgcccc gtcccacatg ggcacggggc gttacggggc
     1681 gtgttctccc actcgctgtt gaccttggtg gcctgaggaa ctggcgtgga ctcctcaacc
     1741 cgggccgggg cacccgcggc ggcagcgaca gccgctgcac cggtcaccgg cccctcaggg
     1801 ccgctggtca tcacttcctc gggctcaccg gactcggagg ccgcagtcac ctgaatccgc
     1861 atcacatacc gcaggaaatc ccgggcgatc agcccatcga gttgactaaa caactcgaaa
     1921 ccctcacgct tccactcggt ggccggatcg cgttggccga tggcccgcag atgaatgccc
     1981 tcacgtaggt gatccatctc gtagaggtgc tcacgccacc gctgatcgat gatgcggagc
     2041 atcacctggc gctccacttc gcgcatggtg tcggcaccta gctcggtctc acgtctctcg
     2101 aacacggcaa ggccgtcggc gctcaggagg tcgtagagct cgtcggttga ctgtgccgcg
     2161 cttacggcgt cggcaccgtc gcccagtggc cagtacgagt ccagttcgac ccgcaggccg
     2221 tcgacgtccc attcctcagg cagatccgat ccacagaaag cctcaatggc accgtcgacc
     2281 accgcgccca acgcgtcgag gacctcgtca cgtagatcac cctcactaga cggttctccc
     2341 gaggaatcgt tctccgatgg gccctcggcc gggttctcca gcgctgaatc c
//
LOCUS       DASCMR010000219         2230 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001052632, whole genome shotgun sequence.
ACCESSION   DASCMR010000219 DASCMR010000000
VERSION     DASCMR010000219.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2230)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2230)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2230
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001052632"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1501
                     /locus_tag="QGG16_05260"
     CDS             <1..1501
                     /locus_tag="QGG16_05260"
                     /inference="COORDINATES: protein motif:HMM:NF024116.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HJP24715.1"
                     /translation="PVRPRTIAAASIVGVGATLLSAIGPSRRVRKIPPVAALRDDVRL
                     TPTGMRRRLIVGSAVALAGIGALAAGMTIELSTRAVLTAIGGGALAAFMGVYLLSPAV
                     TRPVAMVLGWPIRKVYRIPGRLATDNARRAPRRTAATAAALTIGLALVSLAAVVSDSI
                     KATFLSTLDQSVEADLFVYPGTFNPQAGFSAELGSDLQNLAAEQPDLVESAMTMRWTM
                     GGVKIGGDFKDLVAAELEILAEHMNIQVIEGSESGAGTNGLLVHVDPAGDLGLAVGDP
                     VPIDFPGGRTSELTVAAIFEDSALLGNWVVDVSVFDTYLPTAPVSWISVLFPDGADDI
                     SSRAAVEVYTDSYPQVAVEDQSEFRKSQEDQLDQLLSIIQVFLGLSLLIAVLGITNTL
                     ALSVYERTRELGLLRAVGMTRRQLRRMVRWEAVIIALFGGLLGVAMGVLFGLAAIAAI
                     PQEFVDIVSIPYQSLLGYLVVSGIFGMVAAILPARRAARLNVLDAISHA"
     gene            complement(1651..>2230)
                     /locus_tag="QGG16_05265"
     CDS             complement(1651..>2230)
                     /locus_tag="QGG16_05265"
                     /inference="COORDINATES: protein motif:HMM:NF024928.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding domain-containing protein"
                     /protein_id="HJP24716.1"
                     /translation="TGSWAHDDWEGILAHLPDRKPTVRPELTVGYRIPGPIMDVAARV
                     LAVAAPDLAPPRSVRGDGEAPRFIGLTGEQAEKLEGLVEVVRVELESVGAGNLAVIAA
                     DSQTNDVEEALERAGVAFGRPTRRGLDARVTVVPVGLVKGLEVDGAVVVEPARILREQ
                     SQGMRALYVALTRATKRVAVVHTEPLPAALSD"
BASE COUNT          383 a          757 c          686 g          404 t
ORIGIN      
        1 cccggtccgc cctcggacca ttgcggctgc ctcgatcgtg ggggtgggcg caaccctcct
       61 ctccgcgatc ggaccctcac gccgagtccg aaagattcca ccggttgcag ccctccgaga
      121 cgacgttcga cttaccccca ccggtatgcg acgacgcctc atcgtgggta gcgctgtcgc
      181 cctggccggc attggggccc tcgcagcagg gatgaccatc gaactgtcca cccgcgccgt
      241 tctgactgca atcggcggag gggcccttgc ggcattcatg ggcgtctacc tactcagtcc
      301 agcagtgacc cggccggtcg ccatggtgct tgggtggccc atccgcaagg tgtaccggat
      361 accaggacga ctggcgactg acaacgcccg tagagcccca cgccgcacag cggcgaccgc
      421 cgcagccctg accatcggac tcgccctggt gagcctcgcc gcggttgtga gcgactccat
      481 caaggcgacg ttcctaagca ccctcgacca gagtgtcgaa gccgatctct tcgtctatcc
      541 aggaacgttc aacccgcagg caggcttctc agccgagttg ggttccgacc tccagaacct
      601 cgcagccgaa cagcccgacc tcgtcgagtc ggccatgacg atgcgttgga ccatgggtgg
      661 ggtgaagatc gggggtgact tcaaggactt ggtggccgcc gagttggaaa ttctggccga
      721 acatatgaac attcaggtga tcgaaggctc cgagtccggc gccggaacca acggattgct
      781 ggtccacgtt gatccggcag gtgacctggg acttgcagtt ggcgatccag tccccattga
      841 tttcccaggt ggtcgaacga gcgagttgac cgtggcggcg atcttcgagg actcagccct
      901 tcttgggaac tgggtggttg atgtatcggt cttcgacacc taccttccaa ccgctcctgt
      961 ttcttggatc tcggttttgt tccctgatgg cgctgacgac atttcctccc gagctgctgt
     1021 cgaggtgtac accgactcct accctcaggt cgccgttgag gaccaatccg aattccgcaa
     1081 gtcccaagaa gatcaactgg accagttgct gtccatcatc caggtattcc tcggcctttc
     1141 tttgctcatt gccgttctgg gcatcaccaa caccctcgcc ctgtcggtct acgaacggac
     1201 ccgggaactg ggcctgcttc gagcggtcgg catgacccga cgccaactcc ggcgcatggt
     1261 ccgctgggaa gcggtcatca tcgccctatt cggtggcctc ctcggcgtag ccatgggcgt
     1321 gctgttcggc ctagccgcca tcgcggcgat cccacaggag ttcgtcgaca tcgtgtcgat
     1381 cccttaccaa agcctgctgg gctacctggt ggtgtcggga atcttcggca tggtggcagc
     1441 catcctcccg gcgcgccggg cggccagact caacgtgctt gacgccatct cccacgcata
     1501 ggcactaccc cggcctggtg atggccatag cggccagcgc ccggccccag gattcggacg
     1561 ccgtcatgag aaaaccggtg accggctctc gtgaaaccgt ggggagaagg gttgtgatag
     1621 cggcgggcgc acccagccga ccgaccccaa tcagtcagac aaggcggcag ggagaggctc
     1681 ggtgtgaacc acggccactc gcttggtggc gcgggtgagc gccacgtaca acgcccgcat
     1741 gccctgggac tgctcccgca ggattcgggc tggttcgacc acgaccgccc cgtccacctc
     1801 caggcccttg accagtccga cgggcaccac ggttacccgg gcgtcaaggc cacgacgggt
     1861 cgggcgaccg aaggccacgc cggcccgctc gagagcctcc tcgacgtcat tggtctggga
     1921 atcggcagcg atcacggcga ggttgccggc acctaccgac tccaactcga cacgcaccac
     1981 ttcgaccagg ccttcaagct tctcggcctg ttcgccggtc aacccgatga agcggggtgc
     2041 ctcgccgtca ccgcgcacag agcggggtgg agcgaggtcc ggtgcggcca cggccagcac
     2101 ccgggccgcc acatccatga tgggccccgg gatccggtag cccacggtga gctcggggcg
     2161 gactgtcggc ttccgatcag gaaggtgggc gaggatcccc tcccagtcat cgtgggccca
     2221 cgaacccgtg
//
LOCUS       DASCMR010000220         2645 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001054873, whole genome shotgun sequence.
ACCESSION   DASCMR010000220 DASCMR010000000
VERSION     DASCMR010000220.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2645)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2645)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2645
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001054873"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..192)
                     /locus_tag="QGG16_05270"
     CDS             complement(<1..192)
                     /locus_tag="QGG16_05270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /protein_id="HJP24717.1"
                     /translation="MTTVFASPDDLAPAVGTHLGHSDWVEIDQSRIDQFAESTGDNQW
                     IHVDPERAAAGPFGATIAHG"
     gene            282..1217
                     /locus_tag="QGG16_05275"
     CDS             282..1217
                     /locus_tag="QGG16_05275"
                     /inference="COORDINATES: protein motif:HMM:TIGR01297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cation diffusion facilitator family transporter"
                     /protein_id="HJP24718.1"
                     /translation="MSASGGTRAVLAALVANAGIAVAKFVGFALTRSSAMLAEAIHSV
                     ADMSNQALLLLGGRRSRRAPTETHQFGHGRERYFWSFVVALVLFTVGAAFAIHEGIDK
                     VRHPHEMSAPALAVAILMAGIVLETWSLRTAVVEASPLKGGRTWWTFVVRSRNPELPV
                     VLLEDVGALLGLVIALAAVGLSSITGEPRWDGVGTIAIGLLLGVIAVVLAREMQSLLI
                     GESADDDDRSAITAAIGAAPGVVSLIHLRTQHLGPDEILVGAQVSFDPTLDSAGVAAA
                     VDAVERLVRDAVPTAHPIYVEAALPDQPTGPGNPS"
     gene            1214..1987
                     /locus_tag="QGG16_05280"
     CDS             1214..1987
                     /locus_tag="QGG16_05280"
                     /inference="COORDINATES: protein motif:HMM:NF012596.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HJP24719.1"
                     /translation="MTSTGTVRLEVNQDSGGKVASLVLDNPTRRNAMGRAMYATIPDL
                     VAEVDQSPDIRVLLIRGEGREAFCAGSNIAEFRDHRLGDAHLEYDELEHQAIDALAAC
                     RVPVVACIRGACMGGGVGLALAADLRYAADDALFSVPPGFLGIGYSLDSVERLLATVG
                     RSSATELLLTARRLDADEARRIGLIHEVVTVDRLDEVVAERCATIAALAPMTLRAARA
                     ALAGRPDAVALTDACFHSADLVEGISAFEQSRRPQFGNR"
     gene            1984..>2645
                     /locus_tag="QGG16_05285"
     CDS             1984..>2645
                     /locus_tag="QGG16_05285"
                     /inference="COORDINATES: protein motif:HMM:NF024863.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HJP24720.1"
                     /translation="MREQPASPSHDGRLARRILTIGAVVAAWLAFDAHLGSRRVSRAR
                     AANLRGRVRSVHRANPIRAGETVFLGDSITFDGNWEVAFSDLGARNRGIGWDTTDDLL
                     ERLDESLDGPPATVVFMIGTNDLNIGVPHAQTVRNVTHVLDRTATAAPNARIIVQSVL
                     PRTDRYQPLVAPLNAALSRVAVERDVEFVDHTERFAGPDGRLDPALHDDGIHPNGNGH
                     LLL"
BASE COUNT          413 a          944 c          853 g          435 t
ORIGIN      
        1 cccgtgggca atggtggccc cgaacggccc ggcggccgcc cgttcggggt cgacgtggat
       61 ccactggttg tcgcccgtcg actcggcaaa ctggtcgatg cgagactggt cgatctccac
      121 ccagtcgctg tgacccagat gggttcccac ggccggagca aggtcatcgg ggctggcgaa
      181 gacagtggtc atgggggtcg acactacgct cggcctcttc ggtaggccga ttcgggcccg
      241 ccgacggcat ggcgctgaga ggacgaagaa caggaggtcc gatgtcggca tctggaggga
      301 cccgtgcagt gctcgccgcc ttggtggcca acgccgggat cgcggtggcc aagttcgttg
      361 gcttcgccct gacccggtca tcggccatgt tggccgaggc catccattcg gtggccgaca
      421 tgtccaacca ggccctgttg ctgctcggcg gtcgccggtc gcgtcgggcc cccaccgaga
      481 cccatcagtt cggccacggc cgcgagcgct acttctggtc cttcgtggtc gccctggtcc
      541 tgttcaccgt cggtgcggcc ttcgccatcc acgaagggat cgacaaggtc cgtcaccccc
      601 acgaaatgag cgcccccgca ttggcagtgg ccatcctgat ggccggcatc gtgcttgaga
      661 cctggtcgct gcgaaccgcg gtggtcgaag cttccccgct gaagggtggc agaacctggt
      721 ggaccttcgt ggtccggtct cggaaccccg agctgcccgt cgtgctcctc gaagacgtcg
      781 gcgccctcct cggactggtc atcgccctgg cggccgtcgg cctctcgagc atcaccggtg
      841 aaccccgctg ggacggggtg ggcaccatcg ccatcggcct gctgctgggc gtcatcgctg
      901 tggtgctggc ccgcgagatg cagagcctgc tcatcggcga atcggccgac gatgacgacc
      961 ggtccgccat cacggccgct atcggggccg cgccaggtgt ggtgagcctg atccacctcc
     1021 gcacccaaca tctggggccc gacgagatcc tggtcggtgc ccaagtgagc ttcgatccga
     1081 cgttggacag cgccggcgtg gcggcggccg tcgacgctgt ggaacggctg gtgcgcgacg
     1141 ccgtcccgac cgcccatccc atctacgtgg aggctgcgct ccctgaccag cccaccggac
     1201 ccgggaaccc atcgtgacct cgacaggaac ggtccgcctc gaggtcaacc aggactccgg
     1261 cgggaaggtg gcctcgctgg tgctggacaa cccgaccaga cgcaacgcca tgggtcgggc
     1321 catgtacgcc accatccccg acctggtagc cgaggtggat caaagcccgg acatccgggt
     1381 actgctcata cgcggcgagg gccgcgaggc attctgcgcc ggctcgaaca tcgccgaatt
     1441 tcgggatcac cggctgggtg acgcccacct cgagtacgac gagttggaac accaggccat
     1501 cgacgcgctt gcggcctgtc gggtccccgt cgtggcatgc attcgggggg cgtgcatggg
     1561 tggcggcgtc ggtctggccc tggcggccga cctgcgttac gcagccgacg acgccctgtt
     1621 ctccgtgcca cccggcttcc taggcatcgg atactcgctg gactcagtcg aacgcctcct
     1681 ggcgacggtg ggccgatctt cagcgaccga gctcctgctt actgcccgcc gcctagatgc
     1741 cgacgaggcc cgacgcatcg gcctgatcca cgaggtggtt accgtcgacc ggctcgacga
     1801 ggtcgtagcc gaacgctgtg ccaccattgc cgcactcgcc ccgatgaccc tccgggccgc
     1861 ccgggccgcg ttggccggtc gacccgatgc cgtcgccctg actgacgcct gcttccacag
     1921 cgccgatctc gtcgagggga tcagcgcgtt cgaacagtcc cgccgacctc agtttgggaa
     1981 ccgatgaggg aacaaccggc gtcaccatct cacgacggtc gactggcccg tcggatcctg
     2041 accatcggcg ccgtcgtcgc ggcgtggctg gcttttgacg cccacctcgg ctcgcgccgg
     2101 gtcagccggg ctcgagccgc caacctccgc ggtcgagtcc gatcggtcca tcgtgccaac
     2161 ccgatccggg ccggcgagac ggtgtttctc ggtgacagca tcaccttcga tgggaactgg
     2221 gaggtcgcct tctccgacct cggagcccgc aaccgaggca tcggatggga caccactgac
     2281 gacctgctgg aacgacttga cgagtccctc gacggcccac cagccaccgt ggttttcatg
     2341 atcggaacca acgacctgaa catcggtgta ccccacgccc agacggtccg aaacgtgacc
     2401 cacgtattgg accggacggc caccgcggct cccaacgccc ggataatcgt ccagtcggtg
     2461 ctcccccgga ccgaccgcta ccaaccgctg gtcgccccgc tgaacgccgc actttcccgg
     2521 gtagccgtcg aacgcgacgt cgagttcgtc gaccacacgg aacggttcgc cgggccggac
     2581 ggccgactgg accccgcgct acacgacgac ggcatccatc caaacggaaa cgggcacctc
     2641 ctcct
//
LOCUS       DASCMR010000221         1958 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001055749, whole genome shotgun sequence.
ACCESSION   DASCMR010000221 DASCMR010000000
VERSION     DASCMR010000221.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1958)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1958)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1958
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001055749"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(345..1769)
                     /locus_tag="QGG16_05290"
     CDS             complement(345..1769)
                     /locus_tag="QGG16_05290"
                     /inference="COORDINATES: protein motif:HMM:NF013775.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HJP24721.1"
                     /translation="MTDVGVLQDCLGEVLQRLDGFVALYSVERLSGGASQETYRLRVE
                     MTDGERSLALRRSVGPTEGRGIGGPGLVVEARLMVLARQAGVPGPDVCLVLRPEDGLG
                     DGFVMEWIAGESLGARINRSEDLVAARAGLARECGGALARIHSIDLDSTGLRDVLGEV
                     GPEDAVRLTWKRYQEFGSAQPMIDFTARWLLDHLPPDGELALVHGDFRNGNLVVNPTG
                     MGAVLDWEIAHIGDPMRDLGWLCTSSWRFGYPEQPVGGFGSYEDLFAGYEEESGRVVD
                     PEHVRFWEVFGSFWWSIGCLGMADQYRTGPDRSVERAAIGRRSSECQVDCVNLLIPGP
                     VTEVAREGGDHGPDLPRVDELVGSVREFLRSDVVPAIDGRTGFLARVAANSLDIVTRE
                     LEWGGEHRHLEWIRLRNLLGVDGTLGELRLLLAEELRDESVALDADGLLDHLRQTVVN
                     QVLIDQPTYPGCISALSFDVDSQK"
     gene            complement(1780..1956)
                     /locus_tag="QGG16_05295"
     CDS             complement(1780..1956)
                     /locus_tag="QGG16_05295"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP24722.1"
                     /translation="MQVHGGLGYSRHRPFEHIYRHHRRYRITEGAEEIQMRRIAGYMF
                     GFMKQQAPKGVAGD"
BASE COUNT          362 a          675 c          586 g          335 t
ORIGIN      
        1 cactcgtcga gcacccggtg gaatccgtca ggatccgact gcaggtgcgg gaggtcgcca
       61 cagacgaaca ggcggtcggt cacctcgcaa aggcgccgcc accaattggc gggttggatc
      121 tgagtggccg gattgtcgtt cattgctgct ctctctcgta ctcgtacaac agttaattca
      181 cctacaacaa taattaaggg ctgtgacagt ggcccctaga tgcctgcaat catgggaatc
      241 tggcactgcc gagacatttc cgagggcggt gcacgccccc tggccgccca gggccgctcc
      301 ctctaactgc acgtgacacc ggaggtcagc gacctccggt gtttctattt ttgggagtcg
      361 acgtcgaaac tcagtgcgga tatgcacccc gggtaggtgg gctggtctat gaggacctga
      421 ttcacaaccg tttgccggag gtggtcgagg aggccgtcag catccagcgc gacggactcg
      481 tcccgtagtt cttcggctag gagaagcctg agttctccga gggtgccgtc cacgccgaga
      541 aggttccgca gtcgaatcca ctccagatgc cggtgttcac caccccactc cagttcacgg
      601 gtcacgatgt ccagcgaatt ggctgccaca cgggccagga acccggtccg cccgtcaatg
      661 gccggaacca cgtcggaccg caggaactca cggacgctgc cgaccagctc gtcaacccgc
      721 ggcaggtcgg gcccgtggtc accaccttcc cgggccactt cggtgaccgg gccagggatg
      781 aggaggttca cgcagtccac ctggcattca gacgagcgcc ttccgatcgc cgcccgctcc
      841 acgctgcggt ccgggccggt ccggtactgg tctgccatgc ccaggcagcc gatcgaccac
      901 cagaaggatc cgaagacctc ccagaacctg acgtgctccg ggtcgacgac acgacccgac
      961 tcctcctcat atccggcgaa caaatcctca taggaaccaa agccgccgac aggttgctcc
     1021 ggataaccga agcgccaact ggaggtgcag agccatccca ggtcacgcat cgggtcacca
     1081 atgtgggcga tctcccagtc caagacggca cccatgccgg tcgggttgac cacaaggttg
     1141 ccgttgcgaa agtctccgtg aacaagggcc aactccccgt cggggggtag gtggtctagg
     1201 agccaccggg cggtgaagtc gatcatcggc tgggcactgc cgaactcctg gtagcgcttc
     1261 cacgtcaacc tgaccgcgtc ttccgggcca acctcgccca ggacgtcgcg tagccctgtg
     1321 gagtccaggt caatggaatg gatccgcgcc agtgctcctc cgcactcacg ggccagccca
     1381 gccctggccg caaccagatc ctcggagcga ttgatcctgg ctccgaggct ctcgccggca
     1441 atccactcca tcacgaaccc gtctcccagg ccgtcctccg ggcggaggac cagacagaca
     1501 tcagggccgg gcacccccgc ctggcgggcc aacaccatga ggcgcgcctc gactacgagg
     1561 ccgggccctc cgatcccacg cccttcggtc ggcccaacgc tcctgcgcaa cgccaggctg
     1621 cgttcaccgt ccgtcatctc gactcggagg cggtaggtct cttggctggc accccctgac
     1681 aatcgctcca ccgagtagag ggccacgaag ccgtccagcc gctgcaggac ctcgcccaaa
     1741 cagtcctgga gtaccccgac gtcggtcatc gtgtctcgct cagtccccgg cgacgccctt
     1801 gggggcctgc tgcttcatga agccgaacat gtagccggca atgcggcgca tctggatctc
     1861 ctcggcaccc tctgtgatcc ggtagcgccg gtggtgccgg tagatgtgtt cgaacggccg
     1921 gtggcgtgag tagccaagcc cgccgtggac ctgcatag
//
LOCUS       DASCMR010000222         1530 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001059202, whole genome shotgun sequence.
ACCESSION   DASCMR010000222 DASCMR010000000
VERSION     DASCMR010000222.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1530)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1530)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1530
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001059202"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1530
                     /locus_tag="QGG16_05300"
     CDS             <1..>1530
                     /locus_tag="QGG16_05300"
                     /inference="COORDINATES: protein motif:HMM:NF024642.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HJP24723.1"
                     /translation="LTRMVEVGKGGTNQARFEREAIIESVVARLEHLDLGDASLVFGR
                     IDQEVEAGGGVFHIGRVGVWDEEQDPVVVDWRAPVAEAFYRATGLAPMGLQRRRYIVS
                     RGRTVLGLEDELFGDLERFREGDGDGTRLKGEGALIAALETSRTGRLGDIIGTIQSEQ
                     DDIIRAPLSGVHAVQGGPGTGKTVVALHRAAYLLYTHRFPLEGQGMLVVGPNRLFLAY
                     IEQVLPSLGEAGVTLATVGDVVGGVRIDDRREVANKGRLKGDLRMVRFISRAVRTRQR
                     PLRSDLRLGYGLQWLGLSVEESSRIVSEARRRYRTHNAARKFVEGEFYKALVASGRGD
                     LDPEAVRERIRGEMIVREALEWMWPVLTPAQLLNDLFGSRALIRAADRTLTADQVDAL
                     FRPREEVADDVYWTASDAPLLDEARAVLGARPGCKARDAVRTYGHIVVDEVQDLSPMD
                     LRMLDRRSLNGSMTVVGDIAQATGSWAHDDWEGILTHLPDRKPTVRHELTVGYRIPGP
                     I"
BASE COUNT          232 a          477 c          548 g          273 t
ORIGIN      
        1 agctgacccg catggtcgag gtcggtaagg gtgggaccaa ccaggcccgc ttcgaacgcg
       61 aggccatcat cgagtcagtg gtggcccgtc tcgagcacct tgatctgggc gatgcctcgt
      121 tggtcttcgg ccgtatagac caagaggtcg aagctggggg cggcgtgttc cacatcggcc
      181 gggtcggcgt ctgggacgag gaacaggacc cggtggtagt ggactggcgg gccccggtgg
      241 ccgaggcctt ctaccgggct accggtctgg cgcccatggg cctccagcgc cgtcgctaca
      301 tcgtgagccg cggtcgtacc gtgctgggcc tcgaggacga gttgttcggt gaccttgaac
      361 ggttccggga gggtgacggc gatggcaccc gcctcaaggg cgagggtgcg ctcatcgccg
      421 cgttggagac gagccgaacc ggacgtctcg gtgacatcat cggcactatc cagtccgagc
      481 aggacgacat catccgtgca cccctgtccg gggtgcacgc cgtgcagggc ggcccgggga
      541 ccggcaagac cgtggtagcc ctccaccgtg cggcctacct gctctacacc caccgcttcc
      601 cgttggaggg ccagggcatg ctggtcgtcg ggcccaaccg actgttcctc gcctacatcg
      661 agcaggttct gccgtcgctc ggcgaggccg gggtcacgct ggccaccgtt ggcgatgtcg
      721 tcggcggcgt tcggatcgac gaccgtcgtg aggtggccaa caagggtcgc cttaagggtg
      781 acctccgcat ggtcaggttc atctcgcgag ccgtgaggac ccgtcagcgt ccgctccgct
      841 ccgatctgcg gcttgggtac ggcctgcagt ggctgggcct gtcggttgag gagtcgagtc
      901 gcatcgtgtc cgaagcgagg cgtcgttacc ggacccacaa cgctgctcgc aagttcgtgg
      961 agggagagtt ctacaaggcg ctggtcgcat cgggtcgggg cgatctcgat cccgaggcgg
     1021 tgcgcgaacg gatccggggc gaaatgatcg tgcgtgaggc gttggagtgg atgtggccgg
     1081 tcctcacgcc ggcgcaactg ctgaacgatc tgttcgggtc gcgtgcgttg atccgggctg
     1141 ccgaccggac cctcaccgcc gatcaggtcg acgcactttt ccggcctcgg gaggaggtgg
     1201 ccgacgacgt gtactggacg gcgtcagatg cgcctctgct ggacgaggcc cgcgctgtat
     1261 tgggggcccg accaggttgc aaggcccgtg atgcggtccg tacctacggg cacatcgtgg
     1321 ttgacgaggt tcaggacctc tcaccgatgg acctgcggat gctggaccgc cggtcgttga
     1381 acgggtccat gactgtggtg ggcgacatcg cccaggccac gggttcgtgg gcccacgatg
     1441 actgggaggg gatcctcacc caccttcctg atcggaagcc gacagtccgc cacgagctca
     1501 ccgtgggcta ccggatcccg gggcccatca
//
LOCUS       DASCMR010000223         5560 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001071805, whole genome shotgun sequence.
ACCESSION   DASCMR010000223 DASCMR010000000
VERSION     DASCMR010000223.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5560)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5560)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5560
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001071805"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(191..997)
                     /locus_tag="QGG16_05305"
     CDS             complement(191..997)
                     /locus_tag="QGG16_05305"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJP24724.1"
                     /translation="MNDDPEGNGRVTGRIVVVTGGAQGIGRAIVNRFAAEGATVVIGD
                     LTDPGNLFLESDAAGHREWVPLDVTNEISILEFAESVAAVHGGVDVLVNNAGIMDTRA
                     LADETVAGWDLTMAVNLRGPFLMAKHLVPLMEGRSDPAIVNIGSIEGLGANTLHSSYA
                     ASKAGVHGLTRALAVELGPAGIRCNAVAPGWIDTELNRGYVDKHPNREQAVADLATLH
                     PVGRIGEPADVAATVSWLANPDAGFVTGQVVTVDGGRMSRLPIPASLSDD"
     gene            complement(994..1770)
                     /locus_tag="QGG16_05310"
     CDS             complement(994..1770)
                     /locus_tag="QGG16_05310"
                     /inference="COORDINATES: protein motif:HMM:NF024950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HJP24725.1"
                     /translation="MTDSSTGPATGPRVALITGATSGIGRACALRLAAEGFTVVVGGR
                     DATRADAVVAEVTAAGGLATTALGDVADPTYGDEAVGSAIRAHGRLDVLVNAAGVITR
                     ANAEGTSDEEWHRVMSTNVDGLFRCTRAALPALRAVGGGAIVNISSTNGLVGGPGLAA
                     YCASKGAVTNLTRAMALDHAHEGIRINAVCPGAVDTSMLYSERNDSREEVHAMNIGGI
                     PEGRIPAGDEVAHVVAFLADDRSRHVNGANISVDGGYTAA"
     gene            complement(1799..3118)
                     /locus_tag="QGG16_05315"
     CDS             complement(1799..3118)
                     /locus_tag="QGG16_05315"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HJP24726.1"
                     /translation="MGAVTLLPDARRDNGWFEILKEVPPAAPLSGPTEADVVVVGAGF
                     TGLAAARRLGQLRPDAHILLLEAGRIGNNAAGRSSGFGIDHAHNIRSEGFADTAEFEK
                     QQIALNRAGLSYLEEAVTAHGIDCDWSWTGKTHAACTDRGVRDLKHFASTLDRIDEPY
                     ELLDADALVDRLGIDHYHQGLHTPGTALMQPAALCRGLATTLPDNVVVHEETPVTWLD
                     AGPPHELWTDGGSVRTPELLLANNGFLAGFGFYRKHLIPVVTWGSMTRPLTDDESTSI
                     GGHRTWGVIPAAPSGTTVRRLANGRILVRNVYSYSRHSLAGGRRRQRAGRSHRKAFEA
                     RFPSLTDVPFEYTWGGALSMARNGEPVFGTVADGITAASVHNGTGLARGSICGKLIAE
                     MMCGEGSDLLDAMLGRGRPNKNVPDPVLGWGVEMYARRLRLQSGREM"
     gene            complement(3149..4645)
                     /locus_tag="QGG16_05320"
     CDS             complement(3149..4645)
                     /locus_tag="QGG16_05320"
                     /inference="COORDINATES: protein motif:HMM:NF012398.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HJP24727.1"
                     /translation="MALDLADPTALAASINPPTRAVIGGRSVESASRKTFATLNPATG
                     TELAQVSECDAEDVDRAVTAARTAFEDGPWGHLAPADRKRLILRFASLVEAHTDELAI
                     IETLEAGKPISDCSGLDVPDLVATLRWHAEAADKLYDQLSPSGPGRVGMVVREPIGVV
                     GAVLPWNYPLMMAGWKIGPILAAGNTCVVKPAEQTSMSTIRIAELAIEAGIPDGVLNV
                     VPGFGETAGAAIGLHPDVDCVAFTGSTEVGRHFLRYSADSNLKEVLLECGGKSPVIVM
                     ADADDLDAAATGICEGIFWNGGQNCSANSRLIVQRSVADELLERIAERSHDWVVGDPL
                     VSETTMGAMIEEAHLDKVLGHISDAHEAGSTCLVGGNQVRQESGGWFVEPTVFTDVDP
                     DSRLAREEVFGPVLAVTTFDTPEEAIRLANDTDYGLAGTIHTTDLRTAHLAARAIRAG
                     TVAVNCYGEGDITTPFGGFKQSGFGGRDKSITAHEQYTELKTIWMDLS"
     gene            complement(4645..>5560)
                     /locus_tag="QGG16_05325"
     CDS             complement(4645..>5560)
                     /locus_tag="QGG16_05325"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012904.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HJP24728.1"
                     /translation="LAAGTGEFAFLSADEKERIFRIGIDQVAGRIPVICQTSAITTVD
                     AIENSRAAIDLGANAVMVLPPYFEGPFERGVLYHYEKLARAVDAPIVLYNIPVQSGFD
                     ITPDLYRRLIAMENIDYIKDSTGDLIRLQQLVGIGGHVLAGADPLAPFALMAGSAGWI
                     WGAANVMPHECVALYNHITAGRHAEAMGLWRQMLPANLYFWDNPHEAEYNAAVKTATN
                     MVGRAIGPCRRPVMPMSRQGRVALQAALSTLPVNGVDRDRLVFREWEDERDWLVQMTS
                     RAGVGRAGASRFEVGSTRPTTNQNGSSN"
BASE COUNT          852 a         1785 c         1956 g          967 t
ORIGIN      
        1 tgcgggccgg tgaactctat gacccgacgc tcagtttcca gatcgagaac gggttcgagg
       61 ccatctgtgc catccccgac tacatggacg atccagcggt gggcggcaac gccgttctca
      121 tcgtctggcg aaatcccgac ctggtctgac cactcccgac ccgaccggat tgggggtcgg
      181 ctggctgggc tcagtcgtcg gagagtgagg cggggattgg taggcggctc atgcgaccgc
      241 cgtccacggt caccacctgg ccggtcacga agccggcgtc cgggttggcc agccaagaca
      301 cggtggccgc cacgtcagcg ggttcgccga tccggcccac cgggtgcagc gtggctaggt
      361 cggccaccgc ctgctcacgg tttgggtgct tgtcgacgta accccggttt agttcggtgt
      421 cgatccagcc gggggccacg gcgttgcagc ggattcccgc cggaccgagt tcgacggcca
      481 gcgcgcgggt gaggccgtgt acaccggcct tggaagccgc atacgaggag tggagagtat
      541 tggcccccag cccctcgatg gagccgatgt tcacgatggc tggatcggat cggccttcca
      601 tgagcggcac gaggtgcttg gccatgagga acggtccccg aaggttgacg gccatggtga
      661 ggtcccagcc ggccacagtc tcatcggcga gggcccgggt gtccatgatc ccggcgttgt
      721 taaccagtac gtcgacgccg ccgtggacgg cggccaccga ctcggcgaac tccaggatcg
      781 agatctcgtt ggtgacgtcg aggggcaccc actcacggtg gccggctgcg tcactctcta
      841 ggaacaggtt gcccggatcg gtgaggtcgc cgatgacgac ggtggcgccc tcggcggcga
      901 atcggttcac gatggcccgc ccaatgccct gggcgccgcc ggtgaccacg acgatgcggc
      961 cggtgacccg gccgtttccc tccgggtcgt cattcatgct gcggtgtacc caccgtcgac
     1021 gctgatgttg gcaccgttca catgtcggga ccgatcgtcg gccaggaagg ccaccacgtg
     1081 ggcgacctcg tcaccggcgg gaattcgccc ctcggggata ccgccgatgt tcatggcatg
     1141 tacctcttct cgcgagtcgt tacgttccga gtagagcatg ctggtatcca cagcgcccgg
     1201 gcagacggcg ttgatgcgga tgccctcgtg ggcgtggtcc agcgccatgg cccgggtgag
     1261 gttggtgacc gcccccttgg aggcgcagta ggcggccagt ccgggtccgc ctaccagccc
     1321 gttggtcgag ctgatgttga cgatggctcc gcccccgacg gcccgaagtg ccggaagggc
     1381 ggctcgagta caccggaaca ggccgtccac gtttgtggac atgacccggt gccattcctc
     1441 gtcgctggtg ccctcggcgt tggccctcgt gatgacgccc gccgcgttga ccagcacgtc
     1501 gagtcgccca tgggcccgta tcgcggaccc gacggcctcg tctccatagg tcgggtcggc
     1561 cacgtcaccc agcgcggtgg tggccaaccc accggcggcg gtgacctcag ccaccacggc
     1621 gtcggcccgg gtggcgtcgc ggcctccgac gaccacggtg aagccctcgg cagcgaggcg
     1681 caaggcacac gcccggccga ttcccgacgt ggcaccggtg atcagggcga cccgtggccc
     1741 ggtggctggc ccggtagatg aatcagtcat tcggcctttc ctcgttccgg catccggatc
     1801 acatctcgcg gccggactgt aggcgcagcc gacgggcgta catctcaacg ccccacccga
     1861 ggaccgggtc gggaacgttc ttattggggc gaccccggcc gagcatggcg tccagcaggt
     1921 cggagccttc gccacacatc atctcggcga tcaacttccc gcagatggag cccctggcga
     1981 gtccggtgcc gttgtggacg ctggcggccg tgatgccgtc agccaccgtc ccgaagaccg
     2041 gttcgccgtt gcgggccata ctcaaggccc cgccccacgt gtattcgaac ggcacgtcgg
     2101 tgagactggg gaaccgagcc tcgaatgcct tccggtggga ccggccggcc cgctggcgtc
     2161 ggcgccctcc ggcgagtgag tggcgactgt aggagtagac gttccgtacg aggatccggc
     2221 cgttggccag ccggcgaacc gtcgtacccg acggtgcggc cgggatgacc ccccacgtgc
     2281 ggtgcccgcc gatcgacgtc gactcatcgt cggtcaacgg tcgggtcatc gagccccacg
     2341 tgacgaccgg aatgaggtgc tttcggtaga agccgaaccc ggccaggaag ccgttgttgg
     2401 ccagaagcag ttcgggggtc cggacgctgc ccccgtcggt ccacaactca tggggtggtc
     2461 cggcgtctag ccaggtcacc ggggtttcct catgaaccac cacgttgtcc ggcagggtgg
     2521 tggccaggcc ccgacagagg gcagcgggct gcatgagtgc ggttcccggt gtgtgcagac
     2581 cctggtggta gtggtcaata cctagccggt caaccagggc atcggcgtcc agtagttcgt
     2641 acggctcgtc gattcggtcc agggtcgagg cgaagtgctt caggtcccgg acgccgcggt
     2701 cggtacaggc ggcatgggtc ttgccggtcc acgaccagtc gcagtcaatg ccgtgggcgg
     2761 tcaccgcctc ctccaagtac gagagaccgg cccggttcag ggcgatctgc tgcttctcaa
     2821 attcggcggt gtcagcgaag ccctcggatc ggatgttgtg ggcgtggtcg atgccgaacc
     2881 cggacgaccg gcccgcagcg ttgttgccga tacgcccggc ctccaacagg aggatgtggg
     2941 cgtcggggcg caactggccg agccgccggg ccgccgccag gccggtgaac cccgcgccca
     3001 ccacgaccac atcggcctcg gtcgggccgc tcaggggcgc ggcgggtggc acctctttga
     3061 ggatctcgaa ccacccgttg tcgcgacggg cgtcgggtag gagggtgacg gcgcccatgg
     3121 aatcaggaca gctccgtttg aagcggggtc aagacaggtc catccagatg gtcttgagct
     3181 cggtgtactg ctcgtgggct gtgatggact tgtcgcgtcc gccgaagccc gactgcttga
     3241 agccaccgaa cggggtagtg atgtcgccct cgccgtaaca gttcacggct accgtgccgg
     3301 cccgaatggc ccgggctgcc aggtgggcgg tacgcaggtc ggtggtgtga atcgtgccgg
     3361 ccaggccgta gtcggtgtcg ttggccagac ggatggcctc ctccggggtg tcgaaggtgg
     3421 tcacggccag taccggtccg aagacctcct ctcgggccag acggctatcg gggtccacgt
     3481 cggtaaacac ggtgggctcc acgaaccagc cgccgctctc ctgacggacc tggttgccgc
     3541 ctaccagaca cgtcgagccg gcctcgtggg cgtcagagat gtggcccagc accttgtcca
     3601 ggtgggcctc ctcgatcatg gcgcccatgg tcgtctcaga taccagggga tcgccgacca
     3661 cccagtcgtg gctgcgttcg gcaatccgtt ccagtagctc gtcggccact gatcgttgca
     3721 cgatgagacg agagttggcg ctgcagtttt gtccaccgtt ccagaagatt ccctcgcaga
     3781 ttccggttgc tgcggcgtcc aggtcatcgg cgtcggccat gacgatgacc gggctcttgc
     3841 cgccgcactc cagcaggact tccttgaggt tggagtccgc cgagtagcgc agaaagtggc
     3901 gacctacctc ggtcgaaccg gtgaaggcca cgcagtccac gtcggggtgt aggccgatgg
     3961 ccgccccggc cgtctcgccg aatccgggga ccacgttgag cacgccgtcg gggatgccgg
     4021 cctcgatggc cagttcggcg atgcggatgg tcgacatgga ggtttgctcg gccggcttga
     4081 cgacgcacgt gttgccggcg gccaggattg ggccgatctt ccagccggcc atcatcagcg
     4141 ggtagttcca gggcagcacg gcgcccacca caccgatggg ttcgcgcacc accatgccga
     4201 cccgaccggg gcccgacggc gagagttggt cgtagagctt gtcggccgcc tcggcgtgcc
     4261 accggagggt ggctaccagg tcggggacgt ccagtcccga gcagtcgctg atcggcttgc
     4321 cggcttccag ggtctcgatg atggccagtt cgtcggtgtg ggcctcgacg agcgaggcga
     4381 atcgcaggat taggcgttta cggtcggcgg gggccagatg gccccatggg ccgtcctcga
     4441 aggcagttcg ggccgccgtg accgctcggt cgacatcttc ggcatcgcat tccgatactt
     4501 gggccaactc ggtgccggtg gccggattga gggtggcgaa cgtctttctg gaggctgact
     4561 ccacgctgcg gccaccgatg acggcccggg tgggtgggtt gatcgacgcg gccagtgcgg
     4621 tcggatcggc gaggtcgagt gccatcagtt gctgctcccg ttttggttag tggtcggtcg
     4681 tgtactgcct acttcgaagc gactggctcc agcacggccc acgccggcgc gactggtcat
     4741 ctggacgagc cagtcccgct cgtcctccca ttcgcgaaag acgaggcggt cgcggtcgac
     4801 cccgttgacg gggagggtgg agagtgcggc ctgcagagcg actcggccct gacgggacat
     4861 gggcatgacc gggcgacggc agggaccgat ggcgcggccc accatgttgg tggccgtctt
     4921 gaccgctgcg ttgtactcgg cctcgtgcgg gttgtcccag aagtagaggt tggcggggag
     4981 catctggcgc cacagtccca tggcctcggc gtggcggcca gccgtgatgt ggttgtagag
     5041 ggccacgcac tcatgtggca tgacgttggc cgccccccaa atccacccgg cgctgccggc
     5101 catgagggcg aagggggcca gcgggtcggc cccggccagc acatggccgc cgatcccgac
     5161 caactgctgg agtcggatga ggtcaccggt ggaatccttg atgtagtcga tgttctccat
     5221 ggcgatgagc cggcggtaca ggtccggcgt gatgtcgaag ccggactgga ccgggatgtt
     5281 gtacaggacg atcggggcgt cgacggcccg ggccaacttc tcgtagtggt acaggacgcc
     5341 ccgttcgaac ggcccctcga agtagggagg gaggaccatc acggcgttgg ctccgaggtc
     5401 gatggcggcc cgggagttct cgatggcatc cacggtggtg atggccgacg tctggcagat
     5461 caccgggatg cgaccggcca cctggtcgat gccgatgcga aagatccgtt ccttctcgtc
     5521 ggctgagagg aaggcgaact cgccggtgcc ggcggccagt
//
LOCUS       DASCMR010000224         4555 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001072993, whole genome shotgun sequence.
ACCESSION   DASCMR010000224 DASCMR010000000
VERSION     DASCMR010000224.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4555)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4555)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4555
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001072993"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..316
                     /locus_tag="QGG16_05330"
     CDS             <1..316
                     /locus_tag="QGG16_05330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24729.1"
                     /translation="AVSMFIRLTLVPLATPEDMRGRVLAVENVFIGASNELGAAESGL
                     TAAFMGLVGAVIFGGAATLVVVALWWRLFPALRDMDTFDEIRPDPIPVPQSPEQKASP
                     SP"
     gene            313..759
                     /locus_tag="QGG16_05335"
     CDS             313..759
                     /locus_tag="QGG16_05335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HJP24730.1"
                     /translation="MIETAIERWHAVLRGEADLDDLLHENCVFWSPVLFRAQQGRELT
                     KMYLQAAAQVFPGDSPAEKPDQEPGGDPTGGDSAFRYTRRVLDGHLAVLEFETNMGGI
                     AVNGVDIITCDDNGMITEFKVMLRPIKAVEAVRDRMAAMLETLGGG"
     gene            complement(830..1636)
                     /locus_tag="QGG16_05340"
     CDS             complement(830..1636)
                     /locus_tag="QGG16_05340"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HJP24731.1"
                     /translation="MPKMTRTRRGPLAVVEAGDLSAPTLVLLHGIGSSGDAFADQMPA
                     LSDRWRMLAPDAPGYGESADSAEAPGIDGFADVVARLLDDAEIDQAVVLGVSWGGVIA
                     TRFALRHPERLRALVLADTSRGSGHSPETAEMMRDRAQQYAADPEGFVRDRAPLLVAD
                     TTSAEVVARVVSIMATACRMPGYGHAAASLAETDHMPDLGRVDAPTLVVVGEHDRVCP
                     PSDSRRLVEGIPGAVYAEVPETGHLPNQERPDAFNQIVGDWLDGLVDQIG"
     gene            1714..2550
                     /locus_tag="QGG16_05345"
     CDS             1714..2550
                     /locus_tag="QGG16_05345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HJP24732.1"
                     /translation="MSSPKLKVGVQLHPQATTVDALRDAWRRADAMGADSIWIWDHFY
                     PLYGDPDAEHFEGWTLLSAMAADTSHAMLGTMVTGNSYRNPELLADMARTLDHLTDGR
                     MYLAVGAGWFERDYDEYGYEFGTVGSRLRQLEADLPRMRSRLGKLNPPPVGSMPLLIG
                     GSGRKVTLRLVAEYADAWNCFGPPDNVAELSAILDDWCAKVGRNPAEIEHTVAISWDD
                     VHDVGRYMDVGVDHVVVMIGQQRGAVGDLDKAGDAQQVRTGDPFDLSPLESLIAQRDA
                     LG"
     gene            2603..2821
                     /locus_tag="QGG16_05350"
     CDS             2603..2821
                     /locus_tag="QGG16_05350"
                     /inference="COORDINATES: protein motif:HMM:NF021381.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon domain-containing protein"
                     /protein_id="HJP24733.1"
                     /translation="MTDATTTFSCTKCGGTNYEKGEIRTTGSGISRFLNLQNQKFGFM
                     ACEACGYAEFYRMDGKGGFGTVFDILTN"
     gene            2936..4210
                     /locus_tag="QGG16_05355"
     CDS             2936..4210
                     /locus_tag="QGG16_05355"
                     /inference="COORDINATES: protein motif:HMM:NF017532.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HJP24734.1"
                     /translation="MTQQTTDPGVLSSDAESFQRFHTEVLPGRIAAGTGALAHDYLSG
                     KGTLAVRTPAGSWSYVPVDGSVRLVKGEDNADVVVSIGLEAWLGLASDLDTAPGLLYT
                     DRATVPVGDPLRFMGWEPGLRALFHGLPIFDPEASDLRNADGSVLDPTRTFPFAQLKA
                     TAADAANFLRTAGYLCVSDVFSTDEVDVMLDDAEILANEAQPGDMTSWWGRDGNGTEV
                     LTRVLRAASRPSLNALIDDQRVRQIVGIADEDLVPSVENDPESVDRVTVLWKRPGMTD
                     GLGDLPWHRDCGMGGHANRCPSTVLTICLTDGSAEAGELRFLPGSHRGAFPFVDGKAI
                     EAPDGVGLPIGPGDVTLHYSDLMHASLPPTSTTGPHRISVLMGFAPTGPSHHLGGRHY
                     NDALLTNQDGQVEHLGQRLLAERAVSRQSKDG"
     gene            4246..>4555
                     /locus_tag="QGG16_05360"
     CDS             4246..>4555
                     /locus_tag="QGG16_05360"
                     /inference="COORDINATES: protein motif:HMM:NF012334.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HJP24735.1"
                     /translation="MFDLTGRIALVTGGGQNIGAGIAQMLATAGALVLVNDLRADRAE
                     KIVADIVESGGQATAAPFDVTDRDAVLAAVADLGPVDVLVNNAGNGGAEAFLSKDTAA
                     T"
BASE COUNT          838 a         1502 c         1421 g          794 t
ORIGIN      
        1 cgctgtgtcg atgtttatcc ggctgacgtt ggtgcccctc gccaccccgg aggacatgcg
       61 gggccgtgtg ctggccgtcg agaacgtgtt catcggggcg tcaaacgaac tgggtgccgc
      121 cgagtcgggg ttgaccgcag cgttcatggg cctggtcggc gccgtgatct tcggtggtgc
      181 ggccaccctg gtcgtggtgg ccctgtggtg gcgcctgttc ccggcgttgc gcgacatgga
      241 caccttcgac gagattcgac ccgacccgat acctgtaccc cagtcacctg aacagaaagc
      301 gagcccatcc ccgtgatcga aaccgccatc gaacgttggc acgccgtcct gcgcggcgag
      361 gccgacctgg atgatctgct gcatgagaac tgcgtgttct ggtcgcccgt cctgttccgt
      421 gcacagcaag gccgagagct gaccaagatg tacctccagg ctgcagccca agtcttcccc
      481 ggcgactccc ccgccgagaa acccgaccag gagcccggtg gcgacccgac tggtggcgac
      541 tccgccttcc ggtatacccg ccgagtcctt gacgggcatc tcgccgtctt ggagttcgag
      601 acgaatatgg gtggtatcgc cgtgaacggc gtggacatca tcacctgtga cgacaacggg
      661 atgatcaccg agttcaaggt gatgctccgg cccataaagg ccgtcgaggc ggtccgggac
      721 cgtatggccg ccatgctcga aaccctcggc ggaggctgaa ccgcccgcgg tcggttacga
      781 ccgagagtcg cccgtaacgt ccaacggccc tcgacgaaaa cccgcccggt cagccaatct
      841 ggtcaaccag cccgtccagc cagtcgccga cgatctggtt gaaggcatct ggacgttcct
      901 gatttgggag atgaccggtt tcgggcacct cggcgtagac cgccccggga atcccttcaa
      961 cgagacggcg cgagtccgaa ggcggacaga cccgatcgtg ctcgcccacc accacgagcg
     1021 tcggggcgtc aacccggccc aggtcgggca tgtggtcggt ctccgccaga gaggctgccg
     1081 cgtgcccgta gccgggcatc cgacaggccg tggccatgat ggacaccacc cgggccacca
     1141 cttcggctga agtggtgtca gccaccagga ggggggcccg atcgcgcacg aacccttcag
     1201 ggtcggccgc gtactgctga gcccggtccc gcatcatctc agccgtttcc ggcgagtggc
     1261 ccgacccacg gctggtatcg gccagcacga gggcccgcag ccgttcagga tggcgcagtg
     1321 cgaaccgggt ggcgatcacc ccgccccacg agacgccgag caccaccgcc tggtcgatct
     1381 cagcgtcgtc cagcaacctg gccaccacgt cagcgaaccc gtcaatgccg ggcgcctcgg
     1441 cagagtcggc ggattcgcca tacccggggg catcaggagc cagcatccgc caccggtcgg
     1501 acaaagcagg catctgatcg gcgaatgcat cacccgacga gccgatgccg tggagcagaa
     1561 ccagggtggg agccgacagg tcaccagcct ccacgaccgc caatgggcct cgtcgggttc
     1621 tcgtcatctt gggcatggca cctgcctaat cgtcggctgt ccgatcagcg atcgtctcgt
     1681 catcgatcgg ctgactggga cataatgccc cgtatgagct ccccaaaact gaaggtcggc
     1741 gtccaactcc accctcaggc caccacggtc gatgctctgc gcgacgcctg gcggcgagcc
     1801 gacgccatgg gcgccgactc gatctggatc tgggaccact tctaccccct gtacggggac
     1861 ccggatgccg agcacttcga gggctggacc ctgctctcgg ccatggccgc cgatacgtcc
     1921 cacgccatgc tcggcaccat ggtgaccggg aactcgtatc ggaaccccga gctgctggcc
     1981 gatatggctc gcacgcttga ccatctgacg gatggccgca tgtacctggc ggtgggtgcc
     2041 gggtggttcg agcgggacta cgacgagtac ggctacgagt tcggcacggt gggcagccgc
     2101 ctccgccagc tggaagctga cctgccccgg atgcgcagcc ggctcgggaa gttgaacccc
     2161 ccacccgtgg gttcgatgcc gttgctcatc gggggttcgg gccgcaaggt caccctgcgg
     2221 ctggtagccg aatacgcgga tgcctggaac tgcttcggcc caccggacaa cgtggccgaa
     2281 ctgtcggcaa tcctggacga ctggtgcgcc aaggttggtc ggaacccggc cgagatcgag
     2341 cacacggtgg ccatctcatg ggacgacgtc cacgacgtag gccggtacat ggacgtagga
     2401 gtcgaccacg tggtggtcat gattggccag cagcgcggtg cggtcggaga cctcgacaag
     2461 gccggcgacg cgcagcaggt acgcaccggc gacccgttcg acctcagccc gttggagtcg
     2521 ctgatagccc agcgggacgc cttgggttga tctggtcgtt cacctacgat cgtgggacaa
     2581 cacccgatgt caggagcggc ccatgaccga tgcgaccacc actttttcct gcaccaagtg
     2641 cgggggcacc aactatgaaa agggcgagat ccgcaccacc ggatcgggca taagccggtt
     2701 cctgaacctc cagaaccaga agttcggctt catggcctgc gaagcctgcg gctacgccga
     2761 gttctaccgg atggacggca agggaggctt cggcacggtg ttcgacatcc tcaccaactg
     2821 accgggtccc aacaccggta gtcgtggtcg ttggtcgtgt cggtaagaat caaaacgacc
     2881 atgccaatct agatagccat ggcactcagt gggcctgatt aactaccgtc aggtcatgac
     2941 ccagcaaacc actgatcctg gagtcctgag ctccgacgcc gagtcgttcc aacgtttcca
     3001 caccgaggta ctacctggtc ggattgccgc tgggaccggt gctctggccc atgactacct
     3061 gtctggcaag gggaccttgg ccgtccgcac accagctggt tcttggtcct acgtcccggt
     3121 cgatggatcc gtccggttgg tcaagggcga ggacaacgct gacgtggtgg tgtcaatcgg
     3181 ccttgaggct tggctgggcc tggcctctga tctcgacact gctccaggcc tgctctacac
     3241 agaccgagcc acggtgccag tcggcgatcc cctccggttc atgggttggg aaccgggcct
     3301 ccgtgccctg ttccatggtc tcccgatctt cgatcccgaa gcctccgacc tgcgcaacgc
     3361 cgatggttca gtactcgacc cgacccggac ctttccattt gcccaactga aggccaccgc
     3421 tgctgacgct gcgaactttc ttcgaacagc cggttatctg tgtgtctctg acgtcttcag
     3481 caccgacgag gttgacgtca tgctggacga cgcggagatc ctcgccaacg aagctcaacc
     3541 aggtgacatg acctcctggt ggggtcgaga tggaaacgga accgaggtct tgactcgcgt
     3601 tctacgagca gccagccgac ccagcctgaa cgctcttatc gacgaccagc gggtacgaca
     3661 aatagtcggg atcgccgacg aggacctggt ccccagcgtg gagaatgacc cggaatcagt
     3721 cgacagggtg accgtgttgt ggaagcgacc aggcatgacc gatggtctcg gggatctgcc
     3781 ttggcaccgg gactgcggta tgggtggaca cgccaaccgc tgcccttcga cggtcttgac
     3841 catctgtctc actgatggtt ctgccgaagc cggagaactc cggttcctac ccgggtcaca
     3901 ccgtggagcc tttccgttcg ttgatggcaa ggcgatcgag gccccggacg gcgtcggtct
     3961 cccaatcggc cccggtgacg tgaccctcca ctactcagac ctgatgcacg cctcgctgcc
     4021 gcccacgtcc actactggtc cgcaccggat ctcagtgctc atgggatttg ccccgaccgg
     4081 tcccagtcac cacctcggtg gccgccacta caacgacgcg ctgttgacca accaagacgg
     4141 acaagtcgaa cacctcggtc aacgcctctt ggcggagcgg gcagtatcac gccaaagcaa
     4201 agacggttga gaaagaagac cgttgggaaa ctctgaggaa acgtcgtgtt cgatctaact
     4261 gggcgcattg cactcgtgac aggtggaggc cagaacatcg gcgccgggat cgcccagatg
     4321 ttggctaccg caggggccct cgtactcgtc aacgacctac gggccgaccg ggccgagaag
     4381 atcgtcgccg acatcgtcga aagcggtggc caggccaccg cagcgccgtt tgacgtaacc
     4441 gaccgggatg ccgtgctggc cgcagttgcc gacctcggac cggttgacgt gcttgtcaac
     4501 aacgccggca acggtggtgc cgaggccttt ctttcgaagg atacggccgc caccg
//
LOCUS       DASCMR010000225         2967 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001083454, whole genome shotgun sequence.
ACCESSION   DASCMR010000225 DASCMR010000000
VERSION     DASCMR010000225.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2967)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2967)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2967
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001083454"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            6..134
                     /locus_tag="QGG16_05365"
     CDS             6..134
                     /locus_tag="QGG16_05365"
                     /inference="COORDINATES: protein motif:HMM:NF017847.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF933 domain-containing protein"
                     /protein_id="HJP24736.1"
                     /translation="MRWDTLLNKGSWSGARDSGLVRSEGKDYFPEDGDVMEFRFNV"
     gene            238..1077
                     /gene="rsmI"
                     /locus_tag="QGG16_05370"
     CDS             238..1077
                     /gene="rsmI"
                     /locus_tag="QGG16_05370"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: protein motif:HMM:TIGR00096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HJP24737.1"
                     /translation="MTGRLVPGRLMLVATPIGNLGDLSPRAVEALASADLVACEDTRR
                     TGRLLQHAGITGSDLLRLDDHTEERSAVVVLRRIGEGATVALVSDAGMPGISDPGERV
                     VRRVVDAGHSVVVVPGPSAPVAAVAASGLATDRWCMEGFLPRKGSARSDRLAELAVEE
                     RTMVLFESPHRLAATLGEMVRVVGPDRRAVVAREITKLHEEFVRGTVAELAERFAEPP
                     KGEIVLVLEGAPPPSEVGDERIRVVLAEARASGASTRDAADEAARRLGVSRRRAYRLG
                     LES"
     gene            1163..2884
                     /gene="metG"
                     /locus_tag="QGG16_05375"
     CDS             1163..2884
                     /gene="metG"
                     /locus_tag="QGG16_05375"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: protein motif:HMM:NF001100.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HJP24738.1"
                     /translation="MVDTPQTDRRAEIPVAGTPAGTPVLVAVAWPYASGSRHLGHLAG
                     AYLPADIYARHQRLVGNRVIMVSGSDVHGTPITVRADAEGVTPADVVARYHAEFVADW
                     DRLGISWDCYTSTGTANHAEVTQDVFMRLLDNGHIDRRISDQYYDAEADRFLPDRYIE
                     GTCPHCDYTEARGDQCEDCGRTLDPEELVDPRSKITGSTPELRSTEHFYLRLSDFTER
                     LGEWLGTREGWRRHVLNFSKGWVDEGLQDRDITRDLDWGIELPVDDLGPGKRIYVWFE
                     AVIGYLSAAKEWARASGDPEAWRDWWESDDARSVYFIGKDNIPFHTIIWPAMLIGYGG
                     LNLPTDVPANQYVTFKGGKASASRGVGLTIGEGLELFEADALRYALAASLPEQSDTDL
                     SVEEIGRRINEELVATWGNLVNRVLSMVHKTCEGVVPEADGRNAEDLAVLATVDAALA
                     TVTDQIEEVELRAALRTGMDAAASVNAYLNATEPWKLAKTDPGRARVVLGTALAAVAG
                     VRVSLSPYLPFTTLALEDVFGPVLAWKRVEPAPGTPVSKPTPLFTKIDLDELLDGQSP
                     IQQPPAE"
BASE COUNT          477 a          953 c         1023 g          514 t
ORIGIN      
        1 agaccatccg gtgggacacg ctgctaaata agggttcgtg gtccggggca cgggattccg
       61 ggctggttcg tagcgagggc aaggactact tccccgagga cggcgacgtg atggagttcc
      121 gtttcaacgt ctgataggag cgaggcccgc cctcggtcgt cggtcgggac gtacgctcag
      181 tgccatgcca tggttggttc gatgcgatgg caatcccgtg gatcaggaga cgagtcgatg
      241 actggccggc tggtaccggg ccgactgatg ctggtggcca ctccgatcgg caacctcggc
      301 gacctgtcgc cacgggccgt cgaagcgttg gctagcgccg acctggtggc ctgtgaggac
      361 acccggcgga ccggtcgact gctccagcac gccggaatca ccggaagcga cctcctccgc
      421 ctcgatgatc acaccgagga acgttccgca gtcgtggtgc tgcgccggat cggcgaggga
      481 gccaccgtgg ccctcgtgtc cgacgccggt atgcccggga tctcggaccc cggagaacgg
      541 gtggtgcgcc gggtcgtcga cgccggtcat tcggtggtcg tggtgccggg gccctctgct
      601 ccggtggcgg ccgtagcggc cagcggtctg gctactgacc ggtggtgcat ggaggggttc
      661 ctgccccgca aaggctcggc ccgctcggat cggctggccg agttggccgt cgaggaacgg
      721 accatggtgc tgttcgaatc gccgcatcgt ctggcagcca ccctgggaga aatggtcagg
      781 gttgtgggtc ccgaccggcg ggccgtggtg gcccgcgaga tcaccaaact ccacgaggag
      841 ttcgtccggg gcacggtggc tgagttggct gagcggttcg ccgaaccgcc aaagggcgag
      901 atcgtgctgg tgctcgaagg ggcaccgccg ccgtccgagg tcggcgacga gcgtattcgg
      961 gtggtgctgg cggaggcacg ggccagcggg gcgtcgaccc gtgacgccgc cgacgaggcg
     1021 gcccgccgtc tcggggtgtc gcggcgccgg gcctaccgcc tgggcctcga gagctgacgg
     1081 agcgggatcg ctgccgattg gattccctga gggccggtat cgggcaccgt tcgatcgcgg
     1141 gcccaccggt agcctgcggg taatggttga tacaccccag accgatcggc gcgccgagat
     1201 acctgttgct ggtacgcctg ctggcacgcc ggtactggtg gccgtggcct ggccctacgc
     1261 ctccggatcg cgtcacctcg ggcacctggc cggtgcctat ctgccggccg acatctacgc
     1321 ccgccaccag cgcctggtcg gcaaccgggt gatcatggtg agcggatcgg atgtccacgg
     1381 caccccgatc accgttcggg ccgatgccga gggggtcacc ccagctgacg tcgtggctcg
     1441 ctaccacgcc gagttcgtcg ccgactggga tcggctcggc atcagttggg attgctacac
     1501 ctccaccggc accgccaacc acgctgaggt cacccaggac gtcttcatgc gcctcctgga
     1561 caatggccac attgatcgtc ggatcagcga ccagtactac gacgccgagg ccgaccggtt
     1621 cctacccgat cggtacatcg agggcacctg cccccactgc gactacacgg aggctcgcgg
     1681 tgaccagtgc gaagactgtg gccgcacgct tgaccccgaa gaactggtcg acccccggtc
     1741 caagatcacg ggttccacgc ccgagctgcg ttccactgaa cacttctacc tgcggctctc
     1801 ggacttcacc gagcggttgg gggagtggtt gggcacccgc gagggttggc gccggcacgt
     1861 actcaacttc tccaagggtt gggtcgacga gggtctccag gatcgcgaca tcacccggga
     1921 cctcgactgg ggcatcgagt tgccggtcga cgatctgggc cccggtaagc ggatttatgt
     1981 ctggtttgag gccgtcatcg gctacctctc ggcagccaag gaatgggcga gggctagtgg
     2041 tgaccctgag gcctggcgtg attggtggga aagcgacgac gcccgctccg tctacttcat
     2101 cggcaaggac aacattccgt ttcacaccat catctggccg gcgatgctca tcggatacgg
     2161 cgggttgaac ctgcccacag acgtgcccgc taaccagtac gtgaccttca agggcgggaa
     2221 ggcctcggcc agtcgtggtg tgggcctgac tatcggcgag gggctcgaac tcttcgaggc
     2281 cgatgcgctg cggtatgcgc tggccgcctc gttgcctgag caaagcgata ctgacctttc
     2341 cgtcgaggag atcggccgcc gcatcaacga ggaactggtc gccacctggg gaaatctggt
     2401 caaccgggtg ttgtcgatgg tccacaagac gtgtgagggg gtagtgcccg aagcagatgg
     2461 acggaacgct gaggacctcg ccgtgctggc caccgtggac gctgcgctgg ccaccgtgac
     2521 cgaccagatc gaggaggtcg agttgcgggc agcgctgagg actggcatgg atgccgcggc
     2581 gtccgtcaac gcctatctga acgccaccga accgtggaag ttggccaaga ccgaccccgg
     2641 ccgggcccgg gtggtgctgg gtactgctct ggccgcggta gccggcgtcc gggtctcgtt
     2701 gtctccctac ctgccgttca ccacgctggc tctcgaggac gtgttcggac ccgtcctcgc
     2761 ctggaagcgg gtggagccgg cacctggcac gcctgtgtcc aagcccactc cgctctttac
     2821 caagatcgac ctcgacgaac tgctcgacgg ccagtcaccc atccaacaac ccccggccga
     2881 gtagccgacg gaccccggta accatgtcca cttggttcga caaccactgc cacctgggtg
     2941 ctgatgcatg cgaggtggtg gaccggg
//
LOCUS       DASCMR010000226         5298 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001090185, whole genome shotgun sequence.
ACCESSION   DASCMR010000226 DASCMR010000000
VERSION     DASCMR010000226.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5298)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5298)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5298
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001090185"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..444
                     /locus_tag="QGG16_05380"
     CDS             <1..444
                     /locus_tag="QGG16_05380"
                     /inference="COORDINATES: protein motif:HMM:NF015415.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24739.1"
                     /translation="PLDEFVTGVKANALIPGELITAIRVPVLDGPQEFLKVGTRNAMV
                     IAVTSLALVVDRPGRNVRVALGSVAPVPLRAVEAEVLVAERLDFENMASPDSDLVDRF
                     ADLVADAARPIDDHRSSAAYRRHAVRVLARRAILRAFPRSAPVTA"
     gene            441..932
                     /locus_tag="QGG16_05385"
     CDS             441..932
                     /locus_tag="QGG16_05385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HJP24740.1"
                     /translation="MTSVDGFSLSINGENRLVVDAVAGESLLFVLRERLGLAGSKNAC
                     EEGECGSCTVRLDGETVCSCLVLAEAAAGREVVTIEGLGSEGDLSDVQQAFLDAGAVQ
                     CGFCTPGLLMAVDALLDDDSKPDDLTVREAISGNLCRCTGYGRILDAVDRAAAARQAE
                     ATP"
     gene            929..3235
                     /gene="pucD"
                     /locus_tag="QGG16_05390"
     CDS             929..3235
                     /gene="pucD"
                     /locus_tag="QGG16_05390"
                     /EC_number="1.17.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase subunit D"
                     /protein_id="HJP24741.1"
                     /translation="MTVVETGARTSGGPRIGENAPRPDGVPKVTGGFAFSSDLHHDRM
                     LWGATLRSPHPAARIGGLDTSSALAIDGVHAVLTHEDVPGSPTFGLEHCDQPVLACDV
                     VRYEGEPVAVVAADHPDTARRALAAIVVDWQPTEPLVDPALAETADPIHPDGNVIRRI
                     HLRHGDQSAADRDDLVSVEGTYEVGMQDQAFLGPESGMAVPDDDGGVDLYVATQWLHV
                     DRDQVAACLDLPHEKVRLTLAGVGGAFGAREDLSLHVHLCLLALRTGRPVKMSYGREE
                     SFHGHVHRHPARMWYRHHATTDGDLVRVEAHLLLDGGAYASSSSAVIANATCFAAGPY
                     MVPSVEIEGVVVRTDNPPCGAMRGFGAVQTCFAHEAQMDRLAAALNMDPVALRLRNAL
                     EPGDRLATGQVIAGTLPVAEVIRACAGHPSGALGSDEPMARPGGAGRTADAQHVVRGE
                     AVAVGFKNLMFSEGFDDSSAARCVLHHGVATITCACAEVGQGFVTLARQIAGEVLGVD
                     EVVLAPVETTSIGSAGSTSASRQTWMSGGAVQMACETVRRELLAGVSTAHGVSIDDLV
                     LADGRIVSLTGDLDLSLEGLTVEPVEAEVVHRHAPTSPLDGDGQGDAHVSFAVSAHRA
                     IVDVDPDLGLVKVVELTTAQDVGRVLHPLQALGQLEGGAAQGVGLAVMEEVQVTNGHI
                     RNASFTDYLIPTALDMPPLEVAALIEQPEPGAPFGAKGIGEPPSISSTAAVAAAVRDA
                     TGLALPRVPIRPSDICLGGNALTAEVIA"
     gene            3232..4500
                     /locus_tag="QGG16_05395"
     CDS             3232..4500
                     /locus_tag="QGG16_05395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-dependent hydrolase"
                     /protein_id="HJP24742.1"
                     /translation="MTRDRSAALRIDGDRLMRRIEDLAAIGPIDGGGSCRLALTDDDR
                     AGRDLVVTWMRDLGLDISIDGIGNVVGVRAGRIDGPPTMTGSHIDTVQTGGRYDGNLG
                     VLAGLEVIETLETNAIETEHPVAVGFFTDEEGARFPPDMLGSLVYVGGMAVEEALDIE
                     GIDGAVVGVELDRIGYRGTSPCPGPSPRAFVELHVEQGPVLEAEGVTIGAVTGVQGIS
                     WTELTITGQSNHAGTTPMALRHDPAFVAAKVTAHVRELATRMGAMGEGRQVATVGRIE
                     LNPNLINVVAASASMTVDLRNTDEALLQEAESDLACFVAEAAAAEGVTVAQRTLARFE
                     PVAFDNRVVDTVASVATDLGHSIRRMPSGAGHDAQMLARVCPTGMVFVPSRDGISHNP
                     AEHTDPADLVAGADVLLQTILALDQDPLDR"
     gene            4497..>5298
                     /locus_tag="QGG16_05400"
     CDS             4497..>5298
                     /locus_tag="QGG16_05400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HJP24743.1"
                     /translation="MTRSLTIGAAQVGPIQLADTRTMVVERLIGLLREGAEAGCDLVV
                     FPELTLTTFFPRWWVDDLAEADRFYETEMPGPETQPLFDEARRLGVGFHLGYAELTPD
                     GHRYNTAILVERDGTVVGRYRKVHLPGHEDHEPWRAFQHLERYYFEAGDGFDVHGAFG
                     GVVGMAICNDRRWPETYRVLGLQGCELALIGYNTPIHYAPDPDQDRLQGFHNGLVLQS
                     GAYQNGMWVVGVAKAGCEEGCDLLGESAIIAPSGEVRAAAATVGYELVV"
BASE COUNT          808 a         1836 c         1799 g          855 t
ORIGIN      
        1 ccgctggacg agttcgtgac cggggtgaag gccaacgccc tgatccccgg cgagctcatc
       61 acggccatcc gcgtgccggt cctcgacggc ccccaggagt tcctaaaggt gggaacccgc
      121 aacgccatgg tcatcgccgt gacctccctc gccctggtgg tggaccggcc gggccgcaac
      181 gtccgagtgg ccctcggttc ggtggctccg gtcccgctgc gggccgtaga agccgaggtg
      241 ctagtggccg agcggctcga tttcgagaac atggcctctc cggattccga cctcgtggac
      301 cgtttcgccg acctggtggc cgatgccgcc cgacccatcg acgaccaccg cagctctgcg
      361 gcgtaccgac gacacgccgt gcgcgtcctg gcccgccggg ccatcctccg ggcatttccc
      421 cggtccgcac cggtgacggc atgacgagcg tggacggttt ctccctgtcc atcaacggtg
      481 aaaaccgctt ggtagtcgat gccgtggccg gcgagagcct gctgttcgtg ctgcgcgagc
      541 gcttgggtct ggccgggtcc aagaatgcgt gcgaggaggg tgagtgcggc tcgtgcaccg
      601 ttcgcctcga cggggagacg gtgtgtagtt gcctggtgct ggctgaagcg gccgccggac
      661 gcgaggtggt gaccatcgag ggcctcggct cggaaggcga cctctccgac gtgcagcagg
      721 cgttcctcga cgccggagcc gtgcagtgcg gattctgcac acccggtctg ctgatggccg
      781 tcgacgccct actcgatgac gattccaagc ccgacgacct cacggtacgc gaggccatct
      841 ccggcaacct ctgccgctgc actggctacg gccggatcct cgatgctgtc gaccgggccg
      901 ccgcggcccg acaggcggag gccaccccat gacggtggtt gagaccggtg cccggacgtc
      961 gggcggcccc cggataggcg agaacgcacc ccgccctgac ggcgtcccca aggtgaccgg
     1021 cggcttcgcc ttttccagcg accttcatca cgaccggatg ctgtgggggg ccacgctccg
     1081 gtcgccgcac cccgcggccc ggatcggggg cctcgacacg agttcggcgc tggccatcga
     1141 cggagtccat gccgtcctca cccatgagga cgtgcccggt agccccacct tcggactcga
     1201 gcattgcgac cagccggtgc tggcctgcga cgtggtgcgt tacgagggcg agccggtggc
     1261 cgtggtggcc gccgaccatc ccgacacggc gcgccgtgcc ctagcggcca ttgtcgtgga
     1321 ctggcagccc accgagccct tggtggatcc ggcgctggcc gagaccgccg atccgatcca
     1381 tcccgacggc aacgtcatac ggcgtatcca cctgcgtcat ggcgaccagt cggccgccga
     1441 ccgtgacgac cttgtgtccg tcgagggcac ctacgaggtg ggcatgcagg accaggcatt
     1501 cctcggccct gaatccggca tggccgttcc tgacgacgac ggtggcgtcg acctgtacgt
     1561 ggccacccag tggctgcacg tcgatcgcga ccaggtggcg gcctgcctcg atctgcccca
     1621 cgagaaggtt cgcctgacac tggctggcgt aggcggggcg ttcggtgccc gagaggacct
     1681 cagcctccat gtgcacctgt gcctgctggc gctacgcacc gggcgaccgg tgaagatgtc
     1741 ctacggccgc gaggagagct tccacggtca cgtgcatcgc catccagcac ggatgtggta
     1801 ccggcaccac gccacgaccg acggagacct cgtgcgcgtc gaggcccacc tcttgctgga
     1861 cggtggggcc tacgcctcgt ccagcagtgc ggtgatcgcc aacgccacct gcttcgccgc
     1921 cggcccgtac atggtcccat cggtcgagat cgagggtgtg gtggtccgca ccgacaaccc
     1981 accgtgcggg gccatgcggg gcttcggcgc cgtccagacc tgcttcgccc acgaggccca
     2041 gatggatcgg ctggctgccg cgctgaacat ggatcccgtg gccctccggc tgcgaaacgc
     2101 actggaaccg ggggaccgtc tggccaccgg ccaggtcatc gccggaacgc tcccggtggc
     2161 cgaggtgatc cgggcgtgtg ccggccaccc atcgggcgca ctcggttccg acgagcccat
     2221 ggctcgcccc ggtggtgccg gacgaaccgc ggatgcccaa catgtggttc gcggcgaggc
     2281 ggtggccgtg ggcttcaaga acctgatgtt ctcagagggc ttcgacgatt cgagtgcggc
     2341 gcggtgcgtg ctccaccacg gcgtggccac catcacctgt gcgtgcgccg aggttggtca
     2401 gggattcgtg accctggccc gtcagatcgc cggcgaggtg ttgggcgtgg acgaggtcgt
     2461 cctagcaccg gtcgagacaa cgtccatcgg ttcggcaggc tccacgtcgg ccagccgcca
     2521 gacctggatg tccggcgggg ccgtgcagat ggcctgtgag acggttcgcc gcgagctgtt
     2581 ggccggggtg tccaccgccc atggcgtgtc gatcgacgac ctcgtgctgg ccgatggtcg
     2641 gatcgtgtcg ctgaccggag acctggatct ctcccttgag gggctgaccg tcgagccggt
     2701 agaggccgag gtggtccacc gtcacgcccc cacgtcacca ctcgatggcg acgggcaggg
     2761 tgacgcccac gtctcgttcg ccgtctcggc ccaccgggcc atcgtcgatg tcgatcccga
     2821 cctggggctc gtgaaggtcg tcgagctgac cactgcccag gacgttggcc gtgtgctgca
     2881 tccgctgcaa gccctcggcc aactggaggg gggagcggcc cagggcgtgg gcctagccgt
     2941 catggaggag gtccaggtca ccaacggaca catacgcaac gcctcgttca ccgactacct
     3001 gatccccacg gcgttggaca tgccgcccct cgaggtggcc gctctgatcg aacaacccga
     3061 gcccggggcc ccgttcggtg ccaagggaat cggtgagccg ccgtccatct catcgaccgc
     3121 agcggtggcc gcggccgtcc gcgacgccac cggcctcgcc ctgccacgag taccgatccg
     3181 gccgtccgac atctgcctag gtggcaacgc gttgaccgcg gaggtcatcg catgaccagg
     3241 gaccggagcg ctgcactacg tatcgacggt gaccgcctga tgcgacgcat cgaggacctg
     3301 gcagccatcg gccccatcga tggtggcggc tcgtgccgtc tcgccctgac cgacgacgat
     3361 cgggctggcc gagacctggt cgtcacgtgg atgcgtgacc tgggtctgga catctcaatc
     3421 gatgggattg gcaacgtggt cggggtgcgg gccggacgga tcgatgggcc gccgaccatg
     3481 acgggtagcc acatcgacac cgtccaaacc ggcggtcgtt acgacgggaa cctcggcgtg
     3541 ttagccggcc tggaggtcat cgagaccctt gaaaccaatg ccatcgaaac cgagcatccg
     3601 gtggccgtgg gtttcttcac agacgaggag ggcgcccggt tcccgccgga catgctgggc
     3661 agccttgtct acgtgggcgg catggccgtc gaggaagcac tcgacatcga gggcatcgac
     3721 ggtgccgtcg tgggcgtgga gctggatcgc atcggctacc ggggcacctc gccgtgtccc
     3781 ggcccatcac cccgggcctt cgtagaacta cacgtggaac agggcccggt tctcgaggcc
     3841 gagggtgtca ccatcggagc ggtgaccggc gttcagggca tctcgtggac cgagctgacc
     3901 atcaccggcc agtccaacca cgccgggacc acccccatgg ccctgcgcca cgatccggcc
     3961 ttcgtggccg ccaaggtcac agcccacgtg cgtgagctgg ccactcgcat gggcgccatg
     4021 ggggagggtc gacaggtggc caccgtgggc cggatcgaac tgaaccccaa cctgatcaat
     4081 gtggtggccg cttcggcgtc catgaccgtg gaccttcgca acaccgacga ggccctcctt
     4141 caggaagccg agtccgacct ggcctgcttc gtggccgaag ccgcggcggc tgaaggcgtg
     4201 accgtcgccc aacgcacgct ggcccgcttc gaaccggtgg ccttcgataa ccgggtggtc
     4261 gacacggtgg cctcggtggc caccgatctg ggccactcga tccgacggat gccgtcgggt
     4321 gccggccatg acgcccagat gctggcccgc gtgtgcccga ccggcatggt cttcgtgccc
     4381 agccgcgacg ggatcagcca caatccagcc gagcacaccg acccggccga cctggtggcc
     4441 ggggccgatg tcctgctcca gaccatcctc gccctcgacc aggatccact agaccgatga
     4501 cgcgctccct caccatcggg gccgcccagg tcggccccat ccagttggcc gacacccgaa
     4561 cgatggtcgt cgagcgactc atcggcctgc tccgcgaagg agccgaggcc gggtgcgacc
     4621 tggtggtgtt tcctgaactc accctgacga ccttctttcc gcggtggtgg gtcgacgacc
     4681 tggctgaagc cgaccggttc tacgagaccg agatgcccgg ccccgagacg caacctctgt
     4741 tcgatgaggc ccgtcgcctc ggcgtgggct tccacctcgg gtatgccgaa ctcacgcccg
     4801 acgggcaccg ctacaacacg gcgatcctcg tggaacgaga cggcaccgtc gtgggtcgct
     4861 accgcaaggt ccacctcccc ggccatgagg accatgagcc ttggcgggcc ttccagcacc
     4921 tggagcgcta ctacttcgag gccggcgatg gattcgacgt gcacggtgcg ttcggtgggg
     4981 ttgttggcat ggccatctgc aacgaccggc gatggcctga gacctaccgg gtgctgggcc
     5041 tccaaggctg cgagctcgcc ctcatcggct acaacacgcc gatccactac gcccccgatc
     5101 ccgaccagga ccgtcttcag ggcttccaca acgggttggt gctccagtcc ggcgcctacc
     5161 agaacggcat gtgggtggtc ggcgtggcca aggccgggtg cgaagagggc tgcgacctgt
     5221 tgggcgagag cgccatcatc gccccgtcgg gcgaggtccg ggcagcagcg gccacggtgg
     5281 gctatgagtt ggtggtgg
//
LOCUS       DASCMR010000227         2323 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001091617, whole genome shotgun sequence.
ACCESSION   DASCMR010000227 DASCMR010000000
VERSION     DASCMR010000227.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2323)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2323)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2323
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001091617"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            86..171
                     /locus_tag="QGG16_05405"
     tRNA            86..171
                     /locus_tag="QGG16_05405"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:120..122,aa:Leu,seq:taa)
     gene            236..979
                     /locus_tag="QGG16_05410"
     CDS             236..979
                     /locus_tag="QGG16_05410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HJP24744.1"
                     /translation="MSESPDAQMGESPYRYPYPSPDLAARHPFVVHDHQRVDDDTMRS
                     RAEAFRSSVDRRRSIRMFSPDPVPRDLIESAVAAASTAPSGAHKQPWTFVAVSDPATK
                     ERIRLAAETEEKANYLENRMNAEWQEALAPLGTDHHKEFLEVAPWLVVLFEQRYECRP
                     DGSNRKNYYVKESTGIAAGLFVAAIHEIGLATLPHTPSPMAFLRTVLGRPDNERPFVM
                     FPVGHPLPGACVPDLARKALEEVLVVIDD"
     gene            complement(1037..1975)
                     /locus_tag="QGG16_05415"
     CDS             complement(1037..1975)
                     /locus_tag="QGG16_05415"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJP24745.1"
                     /translation="MSDGAETDDRWWTADLPYQIAALLAATSWACSSLIAAEPVRRLG
                     GPRFCRIRMLYVSAMLLVLVTATGGWTTLDASDLGLLAVSGLVGILVGDLALFTAMAR
                     IGPRRTSVLFTCNAPLAAVGGVLLFDESFAPWALVGAVLTVAGITLAVNFGSRSGTHT
                     DVFERVEGSLLVGATWAGIGALGQALGALAVKPILDGGADTLAVAAARVVIATIALWV
                     FARPGDRLARPARRGALLPLDHLRLAGSGFVAMVVGMSLLLWSLGHGDTGVATILSAT
                     TPVILLPLLWLRMRQVPTVGAWAGAALTVVGTALLL"
     gene            2026..>2323
                     /locus_tag="QGG16_05420"
     CDS             2026..>2323
                     /locus_tag="QGG16_05420"
                     /inference="COORDINATES: protein motif:HMM:NF016701.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HJP24746.1"
                     /translation="MGSELRAFEGEDAAEERATGGCACGGVRYRVTGGLRDVVHCHCE
                     PCRRITGHHMAATAARAEDLHLESDETLQWYQRTETVRYGFCSACGGTLFWEATD"
BASE COUNT          419 a          781 c          790 g          333 t
ORIGIN      
        1 caccgtgcga gccgcgttgt ggcaagccgt cgacgaaccg gcgctcgcag cctgaggcct
       61 gcgggctggc taccgtgggc ggtacgcccg ggtggcggaa ctggtagacg cagcgggctt
      121 aaaccccgcg gcccctccgg gggcgtacag gttcgaatcc tgtcccgggc acgactattc
      181 cgatcgcgta ccgctgcggt tccggacgag ggggagcgcg ggggagaatg tccccatgtc
      241 agaatccccc gatgcccaga tgggcgaatc gccctaccgg tacccctatc cgtcgcctga
      301 cctggctgct cgacatccct tcgtggtcca tgaccatcag cgggtcgatg acgacaccat
      361 gcgcagccgt gccgaggcgt ttcgctcctc ggttgaccgg cgccgcagca ttcggatgtt
      421 cagccccgac ccggtacccc gggacctcat cgagtcggcg gtggccgctg cctcgaccgc
      481 cccctctggt gcccacaaac agccgtggac cttcgtagcg gtctccgacc cggcgaccaa
      541 ggaacggatc cgactggccg cggaaaccga ggagaaggcc aactacctcg agaaccggat
      601 gaacgccgag tggcaggagg ccctggcccc gttggggacc gatcaccaca aggagtttct
      661 ggaggtggct ccgtggctgg tcgtcctgtt cgagcagcga tacgagtgtc gtccggacgg
      721 atcgaaccga aagaactact acgtcaagga gagcacgggc atcgccgctg gattgttcgt
      781 ggcggccatc cacgagatcg gcctggccac ccttccccac acgccgtcac ccatggcctt
      841 cctgcggacc gtgctcggcc gtcccgacaa cgagcgcccg ttcgtgatgt tccccgttgg
      901 gcatccactt cctggtgcct gtgtgcctga cctggcccgc aaggccctcg aagaggtgct
      961 ggtcgtcatc gacgactgaa cgacgttccc acgaccaggg ggaccggcag ggcgcctcgc
     1021 cggacgggga gactcgtcag agtagaagag cggtgcccac caccgtgagg gcggcgcccg
     1081 cccaggcgcc gacggtcgga acttggcgca tccgtagcca caggagggga agcaggatga
     1141 ccggcgtggt ggccgagagg atggtggcta caccggtatc gccgtgcccg agcgaccaca
     1201 gcagcagcga catgcccacc accatggcca cgaagccact cccggcaagc cgaagatggt
     1261 ccaatggcag caatgcgccg cgccgtgccg ggcgagccag ccggtcaccg ggtcgggcga
     1321 agacccagag ggcgatcgtg gctatcacca cccgggcggc tgccacggcc agcgtgtcgg
     1381 ctccaccgtc gaggatcggc ttgacggcca atgccccgag ggcctgaccg agggcgccga
     1441 taccggccca tgtcgccccg accagcagtg atccttcgac ccgttcgaag acgtcggtgt
     1501 gggttccgct gcgtgagccg aagttcacgg ccagagtgat cccggccacc gtcaggacgg
     1561 cgccgacaag agcccatggg gcgaatgact cgtcgaacag cagcacgcca cccaccgcgg
     1621 ccaacggggc attgcaggtg aacagcaccg acgttcgacg gggaccgatc cgtgccatgg
     1681 cggtgaacaa cgccagatcg cccaccagga tcccaaccaa ccccgacacg gccaacaggc
     1741 ccagatcgga cgcgtcgagg gtcgtccagc ctccggtggc ggtgactagg acgaggagca
     1801 tggcactgac gtacagcatc cgaatgcggc agaaccgggg accgccgagc cgacgcaccg
     1861 gttcggcggc gatgaggctg ctgcacgccc aggacgtggc agccagaaga gcggcgatct
     1921 gatagggcag atcggcagtc caccaccggt catccgtttc ggcaccatcg gatatggggc
     1981 atcgggtgtg ggttccgagg tgcggtgccg tgcgaggatg cgcgcatggg ttctgaacta
     2041 cgggcgttcg aaggcgagga cgccgccgaa gagcgagcga ccggaggttg tgcctgcggt
     2101 ggagtccgct accgggtcac cggtgggctc cgtgacgtcg tccactgcca ctgcgagccg
     2161 tgccggcgga taaccggcca ccacatggcg gccaccgcgg cgcgagctga ggacctccac
     2221 ctggagtccg acgaaacgct ccagtggtac cagcgaaccg agaccgtccg gtacgggttc
     2281 tgttcggcgt gtggtggcac cctgttctgg gaggccaccg aca
//
LOCUS       DASCMR010000228         1875 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001091975, whole genome shotgun sequence.
ACCESSION   DASCMR010000228 DASCMR010000000
VERSION     DASCMR010000228.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1875)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1875)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1875
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001091975"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..382
                     /locus_tag="QGG16_05425"
     CDS             <1..382
                     /locus_tag="QGG16_05425"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJP24747.1"
                     /translation="WVPPEKRVAAASTLVLASSLGAMAAPMIIGFTMESFGPSAYFWT
                     LAIILGLLALYLAYRTRVRQPIPVERQTRFQPVLARSGELAHSVGKWVMHPLAEWHSR
                     RDDHECEIDDRHPSHWTWPTDGSG"
     gene            complement(389..901)
                     /locus_tag="QGG16_05430"
     CDS             complement(389..901)
                     /locus_tag="QGG16_05430"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24748.1"
                     /translation="MELFQRRRWICPDRVAEGLEAFVAQLDWIDTHTGLSMAGWRAEG
                     HPGGLAAEPGAILATTTYHDHGWFLEEVARLQSLRNYGPVNEATATLTVGVDTFERWN
                     APMHLPSCWTLGDPTFRQDTGPDAEISHIATWSNVEGGEGHVTWFPDEDKTPAAARGG
                     VRTERWRRIH"
     gene            complement(955..1479)
                     /locus_tag="QGG16_05435"
     CDS             complement(955..1479)
                     /locus_tag="QGG16_05435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24749.1"
                     /translation="MQFNLWQGLLGGPVGTVGASSRLDSYSDFTDEVARLYAEDEAYV
                     DMVEAAGAHFVGNAEDSLWNVVHVAGEQGDVPNVCSVVRFQTEGRDFPSGVAFATEMA
                     DFFNSIHGASISVSTSTWGVPFGISVIAAYDSVAHFEASTMATQADPGFRERITGAVG
                     IPGSNMHAVMRRVI"
BASE COUNT          336 a          617 c          570 g          352 t
ORIGIN      
        1 ctgggtacca ccggagaagc gtgttgctgc ggcttcgacg ctcgtactgg catcgagtct
       61 cggggctatg gcggcgccga tgatcattgg tttcacgatg gagtcgttcg gtccctcggc
      121 ttacttctgg acgctcgcca tcatcctcgg cctcctagcc ctctatctgg cctaccggac
      181 acgcgtacgc caacccattc cggtggaacg ccagactcgc tttcagccgg tcctggctcg
      241 atccggggaa ctcgcccact ctgtgggcaa atgggtcatg caccctctcg ccgagtggca
      301 cagccgtcgc gatgaccacg agtgcgagat cgacgaccgc catcccagcc attggacctg
      361 gccaaccgac gggtccggtt gaggcctgtc agtggatacg gcgccaccgt tccgtccgga
      421 ccccgccacg agctgccgcg ggcgtcttat cctcatcggg gaaccacgtc acgtggccct
      481 caccaccctc cacgttgctc caggtagcga tgtgagagat ctcagcgtct gggccagtgt
      541 cctgtcggaa cgtgggatcg ccgagtgtcc agcacgacgg caggtgcatc ggggcgttcc
      601 atcgctcgaa agtgtcgacg cccacggtca gagtcgcagt tgcctcattg accgggccgt
      661 agttacgtag cgattgcagg cgggctacct cttcgaggaa ccagccatga tcgtggtagg
      721 tggtggtggc caggatggcc cccggttcgg cagccaaacc gccagggtgc ccctctgccc
      781 gccaaccggc catcgacagg cccgtatggg tgtcgatcca gtcgagttgg gctacaaaag
      841 cctccaaccc ctcggccacc cggtccggac agatccaacg gcggcgttgg aataactcca
      901 tcctcgcagt ctccctcaac ctcgacctgg aacgcccctc cgaaaagggg actgtcagat
      961 gacgcgacgc atgaccgcgt gcatgttgct gccggggatg cctacggccc ccgtgatgcg
     1021 ctcgcgaaag ccgggatcag cctgtgtcgc catggtggac gcctcgaagt gggccaccga
     1081 gtcgtaggcg gcgatcacgc tgatgccgaa cggtacgccc caggtgctcg tcgacaccga
     1141 aatcgacgcg ccgtggatcg aattgaagaa gtcggccatc tcggtagcga acgccacgcc
     1201 tgacgggaag tccctcccct cggtctggaa gcgcaccacc gagcagacgt tggggacgtc
     1261 gccctgctcg ccggccacgt gtaccacgtt ccagagggag tcctcggcgt tgccgacaaa
     1321 atgagccccc gctgcctcca ccatgtcaac gtaggcctcg tcctccgcat agagacgggc
     1381 cacctcatcg gtgaagtcac tgtaggagtc gagacgactc gacgctccaa ccgtcccaac
     1441 cggaccgccc agaaggccct gccagagatt gaactgcaag gacgtattct gatttagatg
     1501 actgatgagg cccgctgcac ttgcgttgcc cgctcggagc gaatccggct tgatcgttaa
     1561 ctgtcggttg tagatgtaca tggtgtgatt gccgcccatc cgtccttgct gcaggtagtt
     1621 ccggcagacg gcccacggtg ccacgatcgt tggggagtgg tcaagagtcg ggcgataccg
     1681 ccaatcattc cccagtcgct gttaggcgat cttcaggatc tccagagcac gggccacggc
     1741 ggggtccgca gcgagatcct ctgcccgttc gacctgggca agcattgttc gtcgccgtag
     1801 gaagtcgtcg gcttccacga tccattcgtg gtcggccatg acgcgaacct cagcctcggt
     1861 cagtggtacc agtgg
//
LOCUS       DASCMR010000229         2615 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001096497, whole genome shotgun sequence.
ACCESSION   DASCMR010000229 DASCMR010000000
VERSION     DASCMR010000229.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2615)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2615)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2615
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001096497"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..547)
                     /locus_tag="QGG16_05440"
     CDS             complement(<1..547)
                     /locus_tag="QGG16_05440"
                     /inference="COORDINATES: protein motif:HMM:TIGR01891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004180 - carboxypeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HJP24750.1"
                     /translation="MHQLLDAASAVTNDVIALRRDLHRHPELGLDNPSTQVRILTALG
                     GLGLNVQTGTDCTSVVADLIGKHDGPTVLLRADTDALPMTEDSGLDFQSAVEGRAHAC
                     GHDAHTAMLVGAARVLSTRRDEIQGRVRFMFQPGEEGFAGARIMIDEGVLDGVDRAFA
                     LHVSPNQRIGIASSKAGAALAG"
     gene            606..1820
                     /locus_tag="QGG16_05445"
     CDS             606..1820
                     /locus_tag="QGG16_05445"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP24751.1"
                     /translation="MSESTEISGALTSEAIHAALDALLDRRDPDVSGTVLGAGSDDLE
                     GGRRFLDVLVDGGWMVPSWPIRHGGRGADATEAARIGAAMGAYDVADLYPYGVGLNLV
                     GPVLLERGSSDQQERWLRPIADGSEIWCQMFSEPDAGSDLANAGMRAERDGDEWILNG
                     SKVWTSRGTYARWGMCLARTDVSLAKHRGLTMFAVDMTAPGVEIRPLEQINGDRHFTE
                     VFVSDVRVADADRIGDLGAGWGLTVETLAHERATIGGRAFGGGDDEEHGLPSWMEDWR
                     AAGHLADPVARQRAMRAFILHRVNQLTVARAAAALVEGEAPGPSGSGAKLRSVAAFKS
                     RAYLGKDLSGPAGMLSDADGHLEFLTAPSMSIRGGTDEVQRNIVGERILGLPGEPRVD
                     KDAAYADLKKSR"
     gene            1820..>2615
                     /locus_tag="QGG16_05450"
     CDS             1820..>2615
                     /locus_tag="QGG16_05450"
                     /inference="COORDINATES: protein motif:HMM:TIGR02824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HJP24752.1"
                     /translation="MRAVVLDGHGGPEVLTVHDVPDPEPAPGEVLVDVVGTACNRADL
                     LQRMGLYPGPPMDPEIPGLEFAGRVAALGDGVSRWLVGDAVMAITGGGGYAERAVVHE
                     DQAVRVPAGMALDVAGGLAEVFITAWDALVLRGELAAGGTALVHAGASGVGTAAIQLC
                     RMVGAEVIVTASAGKLDRCMDLGASLAVDYRSEDWVAAVSGYTGGRGVDVVLDVVGGD
                     YLDRNVNCLATAGTIVQVGVMGGGSATFGLAKLLVKRATVVGTTLRA"
BASE COUNT          391 a          803 c          974 g          447 t
ORIGIN      
        1 cgccggccag cgctgctccg gccttgctgc tggcgatacc gatccgctga ttggggctga
       61 catggagggc aaatgcccgg tctacgccgt ccagcacgcc ctcgtcgatc atgatccggg
      121 cgccagcgaa gccctcctcg ccgggctgga acatgaagcg aacccgcccc tggatctcgt
      181 cccgccgggt cgacaggacc cgggcggcgc caaccagcat cgccgtgtgt gcatcatggc
      241 cacaggcatg ggcccgaccc tcgaccgccg attggaagtc caggccggag tcctcggtca
      301 tggggagcgc atcggtatcg gctcgcagca ggaccgttgg accgtcatgt ttgccgatca
      361 ggtcggccac caccgaggtg cagtcggttc cggtctggac attgagaccg agtccaccca
      421 gcgcggtcag gatccggact tgggtggacg ggttgtctaa ccccagttcg gggtgacggt
      481 gaaggtcgcg tcgcagggcg atgacgtcgt tggtgacggc tgaagccgca tcgaggagtt
      541 ggtgcatgga cccatcatgg ccgtccgggc tgcacgccat ggggccggac gggcagaata
      601 cgtcgatgag tgaatcgacc gagatctccg gagcactgac ctctgaggcc atccacgccg
      661 cgctcgacgc actcttggac cgccgggatc ccgacgtgtc gggcacggtg ctgggtgctg
      721 gcagcgacga cctcgagggc gggcgacggt tccttgatgt gttagtcgac ggtggttgga
      781 tggttccgtc ctggccgatt cgtcacgggg gccggggtgc tgatgccacc gaggcagccc
      841 gtatcggcgc tgccatgggg gcctacgacg tagccgacct ctacccctac ggggtgggcc
      901 tgaacctggt cgggccggtg ctgttggagc gaggctcgtc tgaccaacag gagcggtggt
      961 tacgaccgat cgctgacggg tcggagatct ggtgtcagat gttttccgaa cccgatgccg
     1021 ggtcggacct ggcaaatgcc ggcatgcgcg ctgagcgcga cggcgacgag tggatcttga
     1081 acggctccaa agtctggacg tcgcggggga cctatgccag gtgggggatg tgcctggcgc
     1141 gcaccgacgt ctcgctggcc aagcatcgtg gactcaccat gttcgctgtt gacatgacgg
     1201 cgcccggcgt ggaaatccga ccgctcgaac agatcaacgg cgatcggcac ttcaccgagg
     1261 tgttcgtgtc cgacgtccgg gtggccgacg ccgaccggat tggtgacctg ggtgccggct
     1321 ggggcctgac cgtcgagacg ctggcccacg agcgggccac catcggaggc cgggccttcg
     1381 gcggcggtga cgacgaggaa cacggcctgc cgtcctggat ggaggactgg cgggccgctg
     1441 gccatctggc cgacccggtg gcccgacagc gtgccatgcg ggcgttcatc cttcatcggg
     1501 taaaccagct cacggtggct cgggcggcag ccgcactggt tgagggcgag gcgccggggc
     1561 cgtcgggctc gggggccaag ttacggagcg tggcggcatt caagtcccgg gcctatctgg
     1621 gcaaggacct gagcgggccc gccggaatgc tgtcggacgc cgacggccac ctcgagttcc
     1681 tgaccgcacc gtcgatgtcg atccgcggcg gtaccgatga ggtgcaacgc aacattgtgg
     1741 gcgaacggat cctcggcctg cccggtgagc ctcgggtcga caaggatgcg gcctacgccg
     1801 acctgaagaa gagtcgctga tgcgagctgt cgtattggac ggccacggtg gcccggaggt
     1861 cctgaccgtc catgacgtgc cagatccgga acccgcgccg ggcgaggtgc tggtcgatgt
     1921 ggtcggcacg gcctgcaacc gggccgacct cctccagcgc atgggcctgt acccggggcc
     1981 gcccatggac cctgagatcc ccggcttgga gttcgccggc cgtgttgccg ctctcggcga
     2041 cggcgtctcg cgttggttgg tgggtgacgc cgtcatggcc atcactggtg gtggggggta
     2101 tgcggagcgg gccgtggtgc acgaggacca ggcggttcga gtgcccgccg ggatggcact
     2161 cgacgtggcc ggcggactgg ccgaggtttt catcacggca tgggacgcgc tcgtactccg
     2221 gggagagctc gcagcgggag gaaccgcact ggtgcacgcc ggggcgtccg gggtcggtac
     2281 cgcggctatc cagctgtgcc ggatggtggg tgccgaagtg attgtcaccg cgtcggccgg
     2341 aaagctcgat cggtgtatgg acctcggggc cagccttgcc gtggactacc ggtccgagga
     2401 ctgggtcgcc gcggtgtcgg ggtataccgg tggccgcggc gtggacgtgg tgctcgacgt
     2461 ggtgggcggc gattacctgg atcgcaacgt gaactgtttg gctaccgccg gcaccattgt
     2521 ccaggtgggg gtgatgggcg gcggatcggc cacctttggt ctagccaagc tcctggtgaa
     2581 gcgggccacg gtggtcggca ccacgttgcg tgccc
//
LOCUS       DASCMR010000230         4508 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001103985, whole genome shotgun sequence.
ACCESSION   DASCMR010000230 DASCMR010000000
VERSION     DASCMR010000230.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4508)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4508)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4508
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001103985"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1425)
                     /locus_tag="QGG16_05455"
     CDS             complement(<1..1425)
                     /locus_tag="QGG16_05455"
                     /inference="COORDINATES: protein motif:HMM:NF023702.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase N-terminal domain-containing
                     protein"
                     /protein_id="HJP24753.1"
                     /translation="MATLPELARAHSDLDEVRITHLQNLVSVWGLLADLSFADLILYA
                     RDSRRADGSLVLLGHMRPTTGTTLYRADLVGQVFEPRRRPLIVKAFEAECTVDGAVEV
                     GSERTVHLTAVPVRRDGETIAVLARERLRPEDRPGSEQERTYLTVFDRFARMLERGEF
                     PYQDEERLRHRTPRVGDGLLLVDADGRIEFASPNAVSTLHRMGVTRGVTGARFDDTGL
                     GSSMLRSAFARRTAVIDEMERPDEVAVVSHCFPLLDAGTPTGAIVLVRDVTELRRRDR
                     QLVSKDATIREIHHRVKNNLQTISSLLRLQARRLEGEEAREALGESVRRIGAISLVHE
                     TLAQSADDEVGFAEIVRPLVRVVEESVSSPLRPVSITVEGDAGVVPGQVATTMAVVLT
                     ELLQNAVDHAFPAAQLADQEAGGTDGDSAPGWVRIQLDRRADGLVVRVVDDGVGIPEG
                     FDVADATGLGLTIVRTFVEGEMGGR"
     gene            complement(1473..1703)
                     /locus_tag="QGG16_05460"
     CDS             complement(1473..1703)
                     /locus_tag="QGG16_05460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3107 domain-containing protein"
                     /protein_id="HJP24754.1"
                     /translation="MDVRIGVTNTPKEITVELADDTDVDALVADVESAVGGDGAVLWL
                     TDVRGRRVGVPAERIAYVDIGADGGHNPVGFG"
     gene            complement(1735..2874)
                     /locus_tag="QGG16_05465"
     CDS             complement(1735..2874)
                     /locus_tag="QGG16_05465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HJP24755.1"
                     /translation="MPVTEPQVVDALRPVQDPELRRSIVDLGMVREIGISGAQVTVQV
                     ALTVPGCPMKAEIQQSVGDAVTALDGVGATEVEFTVMTETELAELRERLHGDPAATAG
                     TNSTYGHSEGRAVPFAEANSSTRVLLIASGKGGVGKSSVTTNLAVALAGRGRDVAVVD
                     ADVWGFSIPRMLGVNQPPTVIDDMLIPPEGHGVRCISMGFFAEEDQPVIWRGPMLHKA
                     LEQFLTDVYWDEPDYLLVDLPPGTGDISISLAGFLPTAEMYVVTTPQPVAQTVAQRAA
                     FMADKVNLKVHGVIENMSWFTGDDGTRYELFGAGGGQVLADRVGVPLLGQVPLVPAMR
                     DGADRGHPVATDPSTEVGAVFAELARVLDVEMKPTKRRHRELKVL"
     gene            2989..3771
                     /locus_tag="QGG16_05470"
     CDS             2989..3771
                     /locus_tag="QGG16_05470"
                     /inference="COORDINATES: protein motif:HMM:NF024248.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HJP24756.1"
                     /translation="MDGPPLTATEFSSAVTAITGAFGDPTRRDIYLHVRERVDEDAGV
                     TATDTAAAFNLHPNVARHHLDKLAAGGYLEIAVERPEGASAGRPSKHYRVADASSPLE
                     LPVRQDAVLVSLLGRALALLPSDQAEEMAEEVGAEVGRSMAGSLGSDEAHRSLRSAMQ
                     VVAEALTAHGFAARAERSGDNRLRIVSEHCPFGGVPIDHPVICAVDRGLVRGMLGALY
                     GETTAETRSSLPMGDAVCVTDVLACPLPFFRPPGARPRPATI"
     gene            3807..4130
                     /locus_tag="QGG16_05475"
     CDS             3807..4130
                     /locus_tag="QGG16_05475"
                     /inference="COORDINATES: protein motif:HMM:NF012488.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HJP24757.1"
                     /translation="MDPKRATLSNGIGDLGRIHHEEMVARHAAEETREPLAAIVGAWN
                     REVVFTSNATGAMDVDAYRSLRLSVGWCSTQADLEAATAAVSGIIRDLGALRQDPHDQ
                     PHDKP"
     gene            4127..>4508
                     /locus_tag="QGG16_05480"
     CDS             4127..>4508
                     /locus_tag="QGG16_05480"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012521.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016791 - phosphatase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HJP24758.1"
                     /translation="MTILLIRHGSAGDPYRWSGDDVDRPLDAAGTDQATRLADHVDGL
                     LAGRPLTEIRSSRAVRCLQTVGPTAGRHGLLPETDPSLFEGASSAMTELVREHAGAED
                     ADRRVVVLCSHSDVIPDVIRDVVSD"
BASE COUNT          754 a         1589 c         1446 g          719 t
ORIGIN      
        1 acgccccccc atctcccctt ccacgaaggt ccgcacgatg gtcaggccga gcccggtggc
       61 gtcggccaca tcgaacccct cggggattcc cacgccgtcg tcgaccaccc gcacgaccaa
      121 gccgtcagca cgacgatcca attggatgcg aacccagccc ggcgctgaat ctccatcggt
      181 accgccagcc tcctgatcgg ccaattgggc ggctgggaaa gcgtggtcga cggcgttctg
      241 taacaactcg gtgaggacga cggccatggt cgtggcaacc tggccgggca ccacaccggc
      301 atcaccctcg acggtgatcg acactgggcg gagcggcgag gacacgctct cttccaccac
      361 ccggaccagc ggtcgcacga tctcggcgaa cccgacctcg tcgtccgcgc tctgggccag
      421 cgtctcgtgc accagcgaga tggcgccgat gcgtcgcacc gactccccga gggcctcccg
      481 ggcctcttcg ccctccaggc gccgggcctg gaggcgcaac agcgacgaga tggtctgcag
      541 gttgttcttc acccggtggt ggatctcgcg aatggtggcg tccttggata ccagctggcg
      601 gtcgcgacgc cgcagctcgg taacgtcacg caccaggaca atggccccgg tcggcgtacc
      661 agcatccagc agggggaagc aatggctgac caccgccacc tcgtcgggcc gttccatctc
      721 gtcaatcact gcagtgcgac gggcgaatgc cgaccgcagc atcgacgaac ccagcccggt
      781 gtcgtcgaac cgggcgccgg tgaccccccg ggtcactccc atgcggtgca gggtggagac
      841 cgcgttgggt gaagcgaact cgattcgacc gtcggcgtcg acgagtagca gaccatcgcc
      901 cacccggggc gtccgatgtc gaagccgttc ctcgtcctgg tacggaaact cccctcgctc
      961 gagcatccgg gcgaagcggt cgaacaccgt caggtaggtg cgttcctgct cgctgcccgg
     1021 tcggtcctca ggtcgtagcc gttcgcgagc aagcacggcg atggtctcgc catcgcggcg
     1081 taccggcacg gccgtgaggt gcaccgttcg ctccgaacca acctcgaccg cgccgtccac
     1141 cgtgcactcg gcctcgaatg ctttgacgat cagaggcctg cgtcggggct cgaatacctg
     1201 gccgacgaga tcggcccgat acagggtggt cccggtggtg ggtcgcatgt gtcccaacag
     1261 gaccaacgac ccgtccgctc gacgcgagtc ccgggcatag aggatgaggt cggcgaacga
     1321 caggtcggct aggaggcccc agacgctgac cagattctga agatgggtga ttcggacctc
     1381 gtcgaggtcc gaatgggccc gggccaactc ggggagggtc gccaccggcc cgctgctccc
     1441 cgacccctac gtgtcgtctc tccggctgtt aatcagccga agccgacggg gttgtgcccg
     1501 ccgtcggcac cgatgtctac gtaggcgatc cgctcggcag gtacccccac ccggcggcct
     1561 cgcacgtcgg tcagccacag cacagcaccg tcgccgccca ccgccgactc gacgtcggcc
     1621 accagggcgt ccacgtcagt gtcgtcggcc agttcgacgg tgatctcctt gggggtgttg
     1681 gtgaccccga tgcgtacgtc cacgttccgc tcccgttcct tcgttccctg accgtcagag
     1741 aaccttgagt tctctgtgcc gacgcttcgt cggcttcatc tccacgtcca gcacccgggc
     1801 cagttccgcg aataccgcgc ccacctcagt agagggatcg gtggcgaccg ggtgccctcg
     1861 atcggcaccg tcgcgcatgg ccggcaccag gggtacctgg ccgagcagcg gcacgccgac
     1921 ccggtcagcc agcacctgtc cgcctccggc accgaacagt tcgtagcgag tgccatcgtc
     1981 gccggtgaac cacgacatgt tctcgatgac cccgtggacc ttcaggttga ccttgtcggc
     2041 catgaaagcc gctcgctggg ccactgtctg ggcaacgggc tgcggagtgg tcaccacgta
     2101 catctccgca gtcggcagga agccagccaa cgagatggag atgtcgccgg ttcccggggg
     2161 gaggtcaacc agcaggtagt cgggctcatc ccagtagacg tcggtcagga actgctcaag
     2221 cgccttgtgg agcatcgggc cccgccaaat gaccggctgg tcctcctcgg caaagaatcc
     2281 catggagata caacgcaccc cgtgaccctc cggcgggata agcatgtcgt cgataaccgt
     2341 cgggggctgg ttgacgccca gcatccgggg aatggagaac ccccacacgt cagcatccac
     2401 gacggctacg tcacggcccc gacctgcgag ggccacagcc agattggtgg tgaccgagga
     2461 cttgcccacg ccgcccttgc ccgaggcgat gagtagcacc ctggtcgacg agttggcctc
     2521 ggcgaacggc acggcccgtc cctcggaatg gccgtaggtc gagttcgtgc cggcggtcgc
     2581 cgccggatcg ccgtggagtc gctcacgcag ctcagccagt tcggtctcgg tcatcacggt
     2641 gaactcgacc tcggtggcgc ccacgccatc caacgctgtg accgcatcac cgaccgactg
     2701 ctgaatctcg gccttcatcg gacatccggg cacagtcagg gctacctgga cggtgacctg
     2761 ggcgccggag ataccgatct cacgaaccat gccgagatcg acgatgctgc ggcggagttc
     2821 agggtcctga acgggccgga gggcatcaac cacctggggt tcggtgaccg gcacggggct
     2881 cctgttcgag gatctgtcga gggaccgaac gctggtcgag cgcacggccg acaagtccaa
     2941 acgaccgctg gcggccgtct ggagtgccgg gatcggtaga ataaccgggt ggacgggccc
     3001 cccctcacgg ctaccgagtt ctcttcggcg gtcacggcga tcaccggagc attcggtgac
     3061 ccgactcgac gggacatcta cctgcacgtc cgtgaacgtg tcgacgagga cgcgggcgtc
     3121 actgcaacgg ataccgctgc ggccttcaac ctccatccca acgtggcccg ccaccaccta
     3181 gacaagctgg ccgccggcgg ctatctggaa atcgccgtgg aacgccccga gggcgcatcg
     3241 gccggccggc cctccaagca ctaccgggtg gccgacgcca gctcccccct tgaactcccg
     3301 gtccgtcagg acgccgtgct ggtcagcctg ctgggccgtg ctctggctct cctgcccagc
     3361 gaccaggccg aggagatggc cgaggaggtg ggcgccgagg tcggtcggag catggcgggc
     3421 tccctcggat ccgacgaggc ccaccggtcg ttgcgatcgg ccatgcaggt ggtggccgag
     3481 gccctcaccg cccacggttt cgccgctcga gctgaacggt cgggtgacaa tcgtctgagg
     3541 atcgtctccg aacactgtcc gttcggcggc gtaccgatcg accatcccgt gatctgcgcg
     3601 gtcgaccggg gcctggtacg cggaatgctg ggcgccctgt atggcgagac gactgctgag
     3661 acgcggtcgt cgctgcccat gggtgatgca gtgtgcgtca ccgacgtctt agcctgcccc
     3721 ttacccttct tcaggccccc gggcgcacgc ccgcgacccg ccactatcta gatcgcgcgt
     3781 ctacctcgcc gggccgccag gaggccgtgg acccaaagag agccaccctg agcaacggca
     3841 tcggcgatct cggtcgcatt caccacgaag agatggtggc ccgtcacgct gcggaggaga
     3901 cccgagagcc cctggccgcc atagtcggag cctggaaccg ggaggtcgtc ttcacctcga
     3961 atgccaccgg ggccatggac gtcgatgcct accggtcgtt acgcctgtca gtcggctggt
     4021 gttccacaca ggccgatttg gaagcggcga ccgcggcggt gtcaggcatc attcgggacc
     4081 tcggggcact ccgtcaggat cctcacgacc agccacacga caagccatga ccatcctcct
     4141 catccgtcac ggttcggccg gcgatcccta ccgctggtcg ggtgacgacg tcgaccgacc
     4201 gctggatgcc gccggtaccg accaggccac ccgtctagcc gaccatgtag acgggctgct
     4261 ggccggtcgg ccgctgaccg aaatccgcag cagccgggcc gtccggtgcc ttcagaccgt
     4321 cgggccgacc gcaggccgcc acggcctact cccggagacc gacccttccc tcttcgaggg
     4381 cgcgtcgtcc gccatgaccg aactggtccg ggaacacgcc ggagccgagg acgcggaccg
     4441 acgggtcgtg gtgctgtgta gccactccga cgtcatcccc gacgtgatcc gtgacgtggt
     4501 ctccgacg
//
LOCUS       DASCMR010000231         5668 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001106910, whole genome shotgun sequence.
ACCESSION   DASCMR010000231 DASCMR010000000
VERSION     DASCMR010000231.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5668)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5668)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5668
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001106910"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..571
                     /locus_tag="QGG16_05485"
     CDS             <1..571
                     /locus_tag="QGG16_05485"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HJP24759.1"
                     /translation="SSGQVSVVTDHIKKFTETGIRLKSGDELDADIIVTATGLNLVTL
                     GEMNFAVDGEPVDFAKTWTYRGLGYSDIPNLVSTFGYVNASWTLKADLTSEYVCRLLN
                     HMADVGATRCTPRLRDEDIDMPSRPWIDDFPAGYMTRSLHLLPRQGDHAPWLNPQDYR
                     RDVKMIRRGEIDDGVMCFDSPDQAPVSVA"
     gene            637..1548
                     /locus_tag="QGG16_05490"
     CDS             637..1548
                     /locus_tag="QGG16_05490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HJP24760.1"
                     /translation="MRIAAIQTSPVYLDRAATIGVVLDRIAEAGAGGADLVAFPEVFV
                     PGYPVWLDLTNAAAWEDPDQQETFARYVDQSVEVHGPEFAQVVDAVQEIGAFTYVGVV
                     ERAASGGSVYCSLVAIDPTSGIVGVHRKLKPTYGERLVWADGDGAGLVAHDHRGVRLT
                     GLNCWENWMPLARSAMYATGSQVHVAAWPGSAGLTEDVTRFVAKEGRMFVVSVGAMYC
                     SEDLPEDLPVRDQLPSGQKYHNGGTCIAGPDGRWIVEPVRDEHGIVWADIDVSEVARQ
                     RQNFDPAGHYSRPDVLSLSVDRTRLAP"
     gene            complement(1563..2450)
                     /locus_tag="QGG16_05495"
     CDS             complement(1563..2450)
                     /locus_tag="QGG16_05495"
                     /inference="COORDINATES: protein motif:HMM:NF015438.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC N-terminal beta barrel domain-containing
                     protein"
                     /protein_id="HJP24761.1"
                     /translation="MSEVGKARRMAEPANSSERKTQEYRVSELWRYPVKSMAGENIDV
                     AEVGIDGIAGDRRWAVRDLETGKVASAKKTRPFGALLHWAASTTDDGTVLVESPDDDA
                     WIAGDPALDRALSATFDRPVAMVAAEDDRQESYDAEWELIPGALPSVSAEVPMAVASA
                     SMAFIDASALHLVTEGALDHLGDLVGAAVAVERFRPTALLRAVNVGVSCGFVDLDWGE
                     GEATLGGASLKMSGPTPRCVMTTLSQRGLDPLRAGLQALAVNARRDTLIGNLPCFGTA
                     AEVTGPGTVRLGDRFAFTG"
     gene            complement(2517..3371)
                     /locus_tag="QGG16_05500"
     CDS             complement(2517..3371)
                     /locus_tag="QGG16_05500"
                     /inference="COORDINATES: protein motif:HMM:NF017532.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HJP24762.1"
                     /translation="MQEASASMGRVLTEDQVDDYLRDGWLSPFDLLTADEVAAARLAL
                     EDFEASCGGDLGPVYRSGSHMLLPWVDDLMRHPRLLDAVEELIGPDLLCWNSIFWIKE
                     ADSASYVGWHQDYEYWGLDDDRLVSVWIALSSASAEAGCMSVIPGSQRRSISHRDTYA
                     ADNLLSRGQELEIDPSEHDPVSMPLSPGQVSFHNVRTAHGSGPNTTDDRRIGLSLHFM
                     PTSARQTKVDWDAAALVRGIDDHGNFAHCPRPKIDMDPDTLPFFQKAAEAMREIIYTD
                     TPTTEQSS"
     gene            3480..4673
                     /locus_tag="QGG16_05505"
     CDS             3480..4673
                     /locus_tag="QGG16_05505"
                     /inference="COORDINATES: protein motif:HMM:NF014047.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAM domain-containing protein"
                     /protein_id="HJP24763.1"
                     /translation="MELQVIDTARDGAGIARADNGLVVFVEGALPGETVEATVFQQDK
                     RWSRARILRIVSPSPHRVEVLCRHRTEGCGGCDLLHVDPGHQAVMKAGMVTDQLARAD
                     VAFPDAEIRPLMNDHGRTTVRAAVVGGRAGYRAGGSHEVIIPRSCSAVDPGVEELLLD
                     GRFDEATEVTIRVGARTGDRIVIVDGGDPEEVDVPEDVLVVSINELDAGLRAWIHEEA
                     AGRRWRISARSFFQNRPAGVDALVEVVDAMVTALAPTANGPMVDAYAGVGIFAGTVGE
                     GRSVTAVERGKASLAAARVNLGARIKDGSVRIAPSTVEQWKATPAQVVVADPARAGLD
                     RDSVRVLLKCQPDLFVLIGCDHSSFARDAALLAKAGMRLERLVVVDLFPGTSHVETVG
                     AFIRD"
     gene            complement(4693..5550)
                     /locus_tag="QGG16_05510"
     CDS             complement(4693..5550)
                     /locus_tag="QGG16_05510"
                     /inference="COORDINATES: protein motif:HMM:NF020905.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1989 domain-containing protein"
                     /protein_id="HJP24764.1"
                     /translation="MKHEPVHPAPSDADQRAAVPVVVCYPPETIPPLDSDLIAAARTG
                     MVKVDEVVVSPREAATFEVSAGGLFRIVSVDGPQVGDLNLFHAHDLSERFWSGKTRAL
                     HGTHLSTGDRMWSTLPHLRPLATVTDDTLDWYGYDTDGGGVHDVIGTRCDPYTQHLLT
                     RMDYHHCCHSNLTRAVARHTDRPEREVELLVHDVMNVFMCTGFTLDTHQYFMKASPVR
                     PGDHIEFLAEVDLLGALSACPGGDCGDEHSSDTAACHPLLVEIYESPVMESWEPAPGT
                     AYRLPTRPV"
BASE COUNT         1006 a         1836 c         1792 g         1034 t
ORIGIN      
        1 ctcctcggga caggtctcgg tggtgaccga ccacataaaa aaattcactg agaccggcat
       61 ccgcctgaag tccggcgacg agctcgatgc cgacatcatc gtgacggcca ctgggctgaa
      121 cctcgtcacc ctcggcgaga tgaacttcgc cgtagacggt gaaccggtcg actttgccaa
      181 gacctggacc taccgcgggc tcggatattc cgatattccg aatcttgtgt cgacgttcgg
      241 gtacgtgaac gcctcatgga cgctcaaggc cgacctgacc tccgaatacg tttgtcgcct
      301 cttgaatcac atggctgatg ttggcgccac acggtgcaca ccccggttgc gcgacgaaga
      361 catcgacatg ccctcacgcc cgtggatcga cgacttcccc gccggctata tgacccggag
      421 cctccacctc ctcccccgtc agggcgacca cgctccgtgg ctgaacccac aggactaccg
      481 acgagacgtg aagatgattc gccgcggtga gatcgacgac ggcgtgatgt gcttcgacag
      541 tcccgaccag gctcccgtgt cagtcgcctg attcgccgtc tggctggcac gccagccaat
      601 tgaaccggac atttccgaat aggaggacca tcaacaatgc gaatcgccgc catccagaca
      661 agccccgtgt atctcgatcg tgccgccacc attggcgtgg tcctcgatcg gattgccgag
      721 gctggtgccg gtggggccga tctggtcgct tttcctgagg tttttgtgcc cggctacccg
      781 gtgtggctgg acttgaccaa cgccgcggcg tgggaggacc ccgaccagca ggagacgttc
      841 gccaggtacg tagaccagtc tgtcgaggta cacggtcccg agttcgctca ggttgtcgac
      901 gccgtccagg agataggggc gtttacctac gtcggcgtgg tcgagcgagc tgcatcgggc
      961 ggatcggtct actgctcttt ggtggccatc gatccgactt cgggaatcgt cggtgtacac
     1021 cgcaagctca agcccaccta cggtgagcgc ctggtatggg ccgacggcga cggagccggt
     1081 ctcgtggccc acgaccaccg gggcgtccgc ctgaccggcc tgaactgctg ggagaactgg
     1141 atgccgctgg cccgttcggc catgtacgcc accggttcac aggtccacgt ggccgcctgg
     1201 cccggttcgg cagggctcac cgaggacgtc acgaggttcg tcgccaaaga ggggcgcatg
     1261 ttcgtcgtca gcgtaggggc catgtactgc tctgaggatc tgccggaaga cctcccggtg
     1321 cgggatcagt tgccgtcggg ccagaagtac cacaacggcg gcacatgcat tgccggccca
     1381 gacggaaggt ggatcgtcga accggtccgg gacgagcacg gcatcgtgtg ggccgacatc
     1441 gacgtgagcg aagtggcgcg gcagagacag aacttcgatc ccgctgggca ctacagccgc
     1501 cccgatgtgc tctcgctatc cgtcgaccgc acccgtctcg ccccctaggc ggcgctgcgg
     1561 gctcagccag tgaaggcgaa ccggtcgcct aggcgaactg tgcccggacc ggtcacctcg
     1621 gccgccgtgc caaagcatgg gaggtttccg atcagggtgt cgcgtcgagc gttgacagcc
     1681 aaggcttgga gtcccgcacg gagtggatcc agaccccgct gagacagcgt ggtcatcacg
     1741 caccggggcg tcggaccact catctttagg gatgccccac caagtgttgc ttcgccctca
     1801 ccccagtcaa ggtcaacgaa tccgcaggaa accccgacgt tcaccgcccg aaggagtgcc
     1861 gttggtcgga agcgctctac cgccacggcc gcacccacaa ggtctcccag atgatccagc
     1921 gccccttcgg tcaccaggtg tagcgctgag gcatcgataa acgccatcga ggcgctggct
     1981 accgccattg gcacctcggc gctgaccgac ggcaacgcgc cgggaatcag ttcccactcg
     2041 gcgtcgtagg actcttgccg gtcgtcctcg gcggcaacca tggccaccgg tctgtcgaac
     2101 gtagcggaga gggcgcgatc tagtgccgga tcgccggcga tccaggcgtc gtcgtcggga
     2161 gactcgacca ggaccgttcc atcgtctgtc gtggacgcag cccagtgcag gagcgcaccg
     2221 aagggtcggg tcttcttagc actcgcaact ttgccggtct ccaggtcacg gaccgcccac
     2281 cgtcggtcgc cggcgattcc atcaatgccg acctcggcca cgtcgatgtt ttcaccagcc
     2341 atcgacttga ccggatatcg ccacaactca gaaaccctgt attcctgcgt ctttctctct
     2401 gagctgttcg ctggttcagc cattcgcctt gcctttccga cctcgctcat atggccccct
     2461 tctactccat gtcaccggca cctcttgccg cttcacacag cgacaccggt ccgacctcag
     2521 ctcgactgct ccgtggtcgg cgtgtccgtg tagatgatct cgcgcattgc ttcagcggct
     2581 ttctggaaga acggaagcgt gtcagggtcc atgtcaatct tcggtcgtgg gcagtgggcg
     2641 aagttcccgt ggtcgtcgat tccgcgtacc agggcggcag cgtcccagtc gaccttggtt
     2701 tggcgggccg acgtcggcat gaagtgcagc gacaggccga ttcgccggtc atctgtggtg
     2761 ttgggacccg aaccatgggc cgtccggacg ttatggaacg acacctgacc gggtgacaac
     2821 ggcatggaaa ccgggtcatg ttcactcgga tcgatctcga gctcctggcc acggctcaac
     2881 aggttgtcgg cagcgtaggt gtcacgatgg ctgatcgagc gtcgttgact cccggggata
     2941 accgacatgc aacccgcctc cgcactggct gaagacaagg cgatccagac gctgaccagg
     3001 cgatcgtcgt caagacccca gtactcgtag tcctggtgcc agcccacgta gctggcgctg
     3061 tccgcctcct tgatccaaaa gatggagttc cagcacagaa ggtcggggcc gatcagctcc
     3121 tccacggcat ccaacaggcg ggggtggcgc ataaggtcgt cgacccatgg cagcagcatg
     3181 tgggaaccag accggtagac aggcccgaga tcaccgccgc aggatgcctc gaagtcttcc
     3241 agggctagac gggccgcggc cacttcgtcg gcggtcagca gatcgaacgg ggacagccag
     3301 ccgtctctca ggtagtcgtc aacctgatct tcggtgagca cccgtcccat tgaagcggac
     3361 gcttcctgca tgttcatttc cccgtgttcg tgtgctgcga gccgggtggc tcgccggcga
     3421 cgaccgtaac cctcccgtgg acggccttcc cagacttcgc cggcggttac cgtcccatcg
     3481 tggaactcca ggtaatcgac acggcacgcg atggtgccgg gatcgcccgg gcggacaacg
     3541 gtctggtggt gttcgtggag ggcgccctgc ccggcgagac cgtcgaggcc accgtattcc
     3601 agcaggacaa gcgctggtct cgggcccgca tcctgcggat cgtttctccg tcgcctcacc
     3661 gagttgaagt gctatgccgc caccgaaccg agggttgcgg aggctgtgat ctactccacg
     3721 ttgaccccgg ccaccaggcc gtcatgaagg ccggcatggt gaccgaccag ctggcccggg
     3781 ccgatgttgc ctttcccgac gcagagatcc gaccccttat gaacgatcac ggacggacga
     3841 cagtgcgggc cgcggtggtc ggcggtcggg ccggctaccg ggccggcgga tcccacgagg
     3901 tcatcattcc ccgatcctgt tcagcggttg atccgggggt tgaggaactc ctactggacg
     3961 gccgtttcga cgaggccacc gaggtaacca tccgggtggg tgcccgcacc ggcgaccgga
     4021 tcgtcattgt cgacggcggt gaccccgagg aggtcgacgt gcccgaggac gtcctcgtgg
     4081 tctcgatcaa cgaattggac gccggcctac gtgcgtggat ccacgaggag gcggcaggtc
     4141 gccgatggcg gatctcggcc cggtcgtttt tccagaaccg tcccgccggc gtggacgccc
     4201 tggtcgaagt ggtagacgcc atggtgaccg ccctcgcacc cactgccaat ggcccgatgg
     4261 tcgacgccta cgccggggtg ggaatctttg ccggcaccgt tggggaaggt cgctccgtca
     4321 ctgcagtgga acgcggcaag gcctcactgg ccgccgcccg cgtcaacctt ggtgcccgta
     4381 tcaaggacgg cagcgtccgg attgctccgt cgaccgtgga acagtggaag gccactcctg
     4441 cccaggtggt ggttgccgat ccggcccggg caggccttga ccgtgacagc gtccgggttt
     4501 tgctgaaatg tcagcccgac ctgttcgtcc tgatcggctg cgaccactcg tcattcgccc
     4561 gcgatgctgc actgctagcg aaagccggaa tgcggctaga acgcctggtg gtcgtcgacc
     4621 tgtttcccgg tacgtcccac gtggagacgg tcggagcctt tatccgtgac taatcccgct
     4681 ctttccaatt cgtcagactg ggcgagtcgg caatcggtaa gccgttcctg gagccggctc
     4741 ccaggactcc atgaccggcg actcgtagat ctccaccagg agagggtgac aggccgccgt
     4801 gtccgacgag tgctcatcgc cgcagtcgcc accagggcaa gccgacaacg cccccaacag
     4861 gtccacctcg gctaggaact cgatgtggtc gccgggacgg accggactgg ccttcatgaa
     4921 gtactggtgg gtatcaagtg tgaaaccggt gcacatgaac acgttcatca cgtcgtggac
     4981 caggagttcg acctcacgct caggacgatc cgtgtgacgg gccacggccc tcgtcaaatt
     5041 cgagtggcaa cagtggtggt agtccatgcg ggtcaacaaa tgctgggtat aggggtcaca
     5101 acgggtgccg atgacgtcgt gcactcctcc cccatcggtg tcgtagccgt accagtcgag
     5161 ggtgtcgtcg gtaacggtgg ccaacgggcg caggtgcggc agcgtgctcc acatccgatc
     5221 accggtcgac aggtgggttc cgtgcagagc ccgggtcttg ccagaccaga agcgttcgct
     5281 caaatcgtgg gcatggaaca ggttcaggtc gcccacctgg gggccatcga cgctgactat
     5341 ccggaacagg cccccggcgg acacctcgaa ggtggcggcc tcccggggcg aaacgacaac
     5401 ctcgtcgacc ttgaccatcc cagtccgtgc tgcggcgatc aggtcggaat ccaacggcgg
     5461 gatggtctcc ggcgggtaac agacgacgac cgggacggcc gcccgttggt cggcatcgga
     5521 aggtgctgga tgaacgggtt cgtgtttcac ccgccggatg gtaggtggct caggcaatat
     5581 cgtccgcctg ggttcatatc ggacacgacc acggagcagg gcttgcgcca accttcaacc
     5641 cccgagacac ggacgtgatc cgtcgtcg
//
LOCUS       DASCMR010000232         4769 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001113708, whole genome shotgun sequence.
ACCESSION   DASCMR010000232 DASCMR010000000
VERSION     DASCMR010000232.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4769)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4769)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4769
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001113708"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..704
                     /locus_tag="QGG16_05515"
     CDS             <1..704
                     /locus_tag="QGG16_05515"
                     /inference="COORDINATES: protein motif:HMM:NF012301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HJP24765.1"
                     /translation="TGDPGHPTRTDGAVILVIEDEPHIADLLDLYLRQDGHRPYLADS
                     GERALVLFAERSPALVLLDLGLPGDIDGLEVCRRIRATSDVPIIMITARDDEVDRIVG
                     FELGADDYVVKPFSPRELMGRVRAVLRRSANTQTTTGPVVEFGGVRIDGERLEATVDG
                     VVALLATREFALLWFLVEHTGRALTRRQILDGAWGAGWIGDERTVDVHVRQVRRKLGD
                     DLPLATVRGVGYRLD"
     gene            718..2148
                     /locus_tag="QGG16_05520"
     CDS             718..2148
                     /locus_tag="QGG16_05520"
                     /inference="COORDINATES: protein motif:HMM:NF014567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HJP24766.1"
                     /translation="MRTRLLTTMVGLVVLALVLVGAGTTVVASTRSASTTERHVVGQT
                     LALAAALEDGMTVLNRPRLGQGVRERLRQSMDLEQIGLAVVPRDGSPLVVLNELPRVV
                     TYDDLRPLAEDAARPDEAAHTSGVRDAVAWAAAVVPLRSTATGPAIVVVASRRSVDPL
                     AGTYQWMLLGALVSIVVSVLVALRLSRSLAHPVIEMAPAAHKLADGHLDTRLDSDPAG
                     SKSRRPDEVSELVAAVNTMAEGLERSRGLERQFLLSVSHDLRTPMTSIRGYAEALVDG
                     TISEPIQAGRVILAEAARLERLVRDLLELAHLDARQFALHLHPVDIAASTAEVVEAFG
                     PAAAESGIQVTVKTSATNAAGIGDDVVAMVDHDRWAQIVGNLIENGLRYAATTLTVEI
                     QSTGPSIQVRIIDDGPGIAADDLPHVFERLYVAQHHPTGRESGSGLGLAIVRELVEAM
                     DGEVEAVAPPDGGTEMLVRIPSVSEE"
     gene            complement(2131..2964)
                     /locus_tag="QGG16_05525"
     CDS             complement(2131..2964)
                     /locus_tag="QGG16_05525"
                     /inference="COORDINATES: protein motif:HMM:NF013720.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24767.1"
                     /translation="MTIVRRQRDVLRVTGPDAQTYLQGQLSQDVDALGVGDAAETFVL
                     QPTGKVEAWMRVSRMADDVFMLDVDAGWGMVVVARLTRFLLRTDCTVEPVDWGLVTVL
                     DAEMGSVDAPPGGLALPVTWPGLQAVDLLGPSVDLPKGPTNGDGSMWEHRRIAAGIPM
                     MGAEMDETTIPGATGVVDRSASFTKGCYTGQELVARVDSRSAGTPTRIVRATGQGPLP
                     SAETEITLDGVVAGRLTSVAARPGAGPNDGFVALAEVKRAIVVPVTVDANGTSVSLLA
                     D"
     gene            complement(2987..4525)
                     /gene="trpE"
                     /locus_tag="QGG16_05530"
     CDS             complement(2987..4525)
                     /gene="trpE"
                     /locus_tag="QGG16_05530"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HJP24768.1"
                     /translation="MVSPDREEFRALARGHAVVPVWRELLADLTTPVSLYARCVGDGE
                     GFLLESVDRGETWGRWSFIGRNPSLTLTSHGAGGDLDVSGDLPAGIRTDAGMLAALED
                     LLEHFRSPTIEDLPPLHGGLMGYLGYDVVREVEHLPDVPPDDRGFPDGIMSVIGEMVA
                     IDHWRQRAVLLVNVVVPELTGDEVADNAVLDAAYDEAASRLDQLASDGARPLDEPLMA
                     PPDPTDEPPEVTSTMGADLYKVAVEVAREHILAGDVFQVVLSQRFDVELDAEPYDVYR
                     VLRQVNPSPYMYFLRYEDLTVVGASPEPMVQLLDGRVVSRPIAGTRRRGRNDVDDRRM
                     AAELAEDPKEVAEHVMLVDLARNDVGRVVAFGSEEVEEMMTLERYSHVMHLTSQVAGE
                     LAEGCTPIDVLRATLPAGTVSGAPKVRAMEIIDALEPVKRGPYAGVVGYFDFTGNIDT
                     AIAIRTMFVRDGIASVQAGAGIVADSVPELEHLECQNKARALLSTIPAARRMTAARRT
                     ASSD"
     gene            complement(4542..>4769)
                     /locus_tag="QGG16_05535"
     CDS             complement(4542..>4769)
                     /locus_tag="QGG16_05535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HJP24769.1"
                     /translation="GRTWFWSRSRREYWCKGETSGDRQYVREAYYDCDADTLLFVVEQ
                     EGKGACHTGEYSCFFRPFGPGAASDAVVDAG"
BASE COUNT          864 a         1614 c         1486 g          805 t
ORIGIN      
        1 tgactggaga cccgggtcac ccgacgcgta ccgacggtgc cgtgatcctg gtcatcgagg
       61 acgagcccca catcgctgac ctgctggacc tctacctccg tcaagacggc catcgcccct
      121 acttggcgga cagcggcgag cgggcgttgg tcctgttcgc cgaacgatcg ccggcactgg
      181 tactccttga cctcggcctg ccgggcgaca tcgacggcct ggaggtctgc cgacgcatcc
      241 gtgccacatc ggacgttccc atcatcatga tcacggcccg cgatgacgaa gtcgaccgga
      301 tagtcggctt cgagttaggc gccgacgact acgtggtcaa gccgttcagc ccccgcgaac
      361 tcatgggccg cgtccgcgca gtgctccgcc gctcagcgaa cacccagacg acgaccggac
      421 cggtggtcga attcggtggt gtccgcatcg acggcgaacg cctcgaggcc acggtggatg
      481 gtgtcgtggc tttactggcc acccgcgagt tcgctctgct gtggttcctc gtcgaacaca
      541 ccggtcgagc cctgacccgg cgccaaattc tggacggcgc atggggcgcc ggttggatcg
      601 gtgacgagcg gacggtcgac gttcatgtga ggcaggtccg tcggaagtta ggtgacgacc
      661 tccccctagc cacggtccgc ggtgtcggtt accggctgga ctgatggggc acactccatg
      721 aggacccgac tgctcaccac catggtcgga ctggtcgtcc tggccctcgt cctggtcggc
      781 gcaggaacca cggtggtcgc ttcgacccgc tcggcgtcga ccaccgagcg ccatgtggtc
      841 ggccagaccc tcgccctggc cgcggcgtta gaagatggca tgacggttct gaaccgcccc
      901 agactcggac agggtgtccg cgaacgactc cgacagtcaa tggacctcga gcagattggc
      961 cttgccgtgg tcccacgtga tggcagtccc ctagtcgtcc tcaacgaact tccacgcgtt
     1021 gtcacctacg acgacctgcg tccattggcc gaggatgctg ctaggcccga cgaagcggcc
     1081 cacacatcgg gggtccgaga cgctgtggcc tgggcggccg ccgtggttcc gttgcggtcc
     1141 accgccaccg gtccggccat cgtcgtggta gccagccgtc gatccgtaga cccgctggcc
     1201 ggcacctacc agtggatgct gctgggcgcg ttggtgtcca tcgtcgtctc cgtgctcgta
     1261 gccctccgcc ttagccgctc tctggcccac ccggtgatcg agatggcccc agccgcccac
     1321 aaactcgcgg acggccacct ggatacccga ctggattcgg atccggccgg ttcaaagtcc
     1381 cggcggccag atgaggtctc cgaactggtg gcggcggtaa acaccatggc tgagggactg
     1441 gagcgatccc ggggtctgga acgccagttc ctgctttcgg tctctcacga tcttcggaca
     1501 ccaatgacct ccatccgcgg ctacgccgag gctctggtcg acgggaccat ctccgaaccg
     1561 atccaggccg gcagggtgat cctggccgag gccgcccgtc tggaacgcct cgttcgtgac
     1621 ctgctcgagt tggcccatct ggatgcccga cagttcgccc tacacctgca cccagtggac
     1681 attgccgcgt cgaccgccga ggtggtcgag gcgttcggcc cggcggccgc tgaatccggc
     1741 atccaggtca ccgtcaaaac ctcggcaaca aacgctgccg ggattggaga cgacgtcgtg
     1801 gcaatggtcg accacgaccg gtgggctcag atagtcggca atctgattga aaacggtctg
     1861 cggtacgcgg caaccactct gacagtggag attcagtcga caggaccgtc gattcaggtc
     1921 cggatcatcg acgatggtcc gggaatcgca gccgacgatc tcccccacgt attcgaacgt
     1981 ctctacgtgg cccagcacca cccgaccggc cgggagtcgg gttccggcct gggtttggcc
     2041 atcgtccgtg aactggtgga agccatggat ggcgaggtgg aagccgtggc acctcccgac
     2101 ggcggcaccg aaatgttggt acggatcccc tcagtcagcg aggagtgaga ccgacgtgcc
     2161 gttggcgtcg accgtaaccg gcaccacaat ggcccgcttt acctcagcaa gggccacaaa
     2221 cccgtcgttg ggtccagccc cgggtcgggc ggccacgctg gtcagccgac cggccacaac
     2281 accatcaagg gtgatttccg tctcggccga cggcaacgga ccctgtccgg tcgcccgcac
     2341 gattcgtgtc ggagttccgg cactccgact gtcgacccgt gccaccaact cctgaccggt
     2401 gtagcacccc ttggtgaagc tggctgaccg gtcaaccact ccggtggcac caggaatggt
     2461 cgtctcatcc atctcggcgc ccatcatcgg gatgccggca gcgatccgac ggtgctccca
     2521 catcgaaccg tcaccattgg tggggccttt aggcagatca accgacggac cgagcaggtc
     2581 gacggcttgc aggccgggcc aggtcacagg caacgccaac ccgcctggcg gggcatccac
     2641 cgaccccatc tcagcatcta gcaccgtgac cagaccccag tcgacgggtt ccaccgtgca
     2701 gtcggtccgc agcaggaagc gggtcagacg ggccactacg accattcccc aaccagcgtc
     2761 cacatccaac atgaacacgt cgtcggccat cctcgaaacc cgcatccacg cctcgacctt
     2821 gccagtgggc tgcaacacga aggtctccgc tgcgtcgccg acgcccagag cgtcaacgtc
     2881 ctgactgagc tggccctgga ggtatgtctg ggcatcgggc ccggtaaccc gtaggacgtc
     2941 gcgctgccga cgaacgatgg tcataacggt ggcttcataa gaaaggtcaa tcgctgctag
     3001 cagtccgacg ggccgctgtc atccggcggg cagccggaat ggtcgatagc agcgcccgag
     3061 ccttgttctg gcattccagg tgctctagct ccggaacact gtcagccacg atgcccgctc
     3121 cggcctggac tgaggcgatt ccgtcacgga cgaacatggt gcgaatggca atggccgtgt
     3181 cgatgttgcc ggtgaaatcg aagtaaccaa cgacgcccgc atatgggcca cgcttgaccg
     3241 gctcgagggc gtcgatgatc tccatggccc tcaccttggg ggcaccggaa accgtaccgg
     3301 caggcaaggt tgcccgaagg acgtcgatgg gggtgcagcc ttcggccaac tcgccggcaa
     3361 cctgactggt gaggtgcatg acgtggctgt aacgctccag cgtcatcatc tcctcgacct
     3421 cttcggagcc gaacgccacg acccgaccca cgtcgtttcg ggccaagtcg acgagcatca
     3481 catgctcggc cacctccttg gggtcctcgg ccaattcggc ggccatccgg cgatcgtcga
     3541 cgtcattacg gccccgacga cgggtgccgg caatgggccg tgatacgacc cgaccgtcga
     3601 gcaactgaac catgggctcg ggcgaggctc ccaccacggt gaggtcctcg taacgcagaa
     3661 agtacatata gggactcgga ttgacctgtc ggagcacccg gtacacatcg tagggctcgg
     3721 catcgagctc cacgtcgaaa cgttgtgaca agacaacctg gaacacgtcg ccagccaaga
     3781 tgtgctcccg tgcgacctcc acggcgacct tgtacaggtc agcgcccatg gtggaggtca
     3841 cctcaggcgg ctcatcagtg ggatcaggcg gcgccatcaa gggttcgtcg agtggtcggg
     3901 ctccgtctga tgccaactgg tcgagcctgg atgccgcctc gtcgtaggcg gcatccagta
     3961 ctgcgttgtc ggccacctcg tcgccggtga gctcgggcac caccacgttg accaacaaaa
     4021 cggcccgttg gcgccaatgg tcgatagcca ccatctcgcc gatgaccgac atgatcccgt
     4081 cgggaaaacc ccggtcgtcg ggcggcacat ctgggagatg ttccacttcg cgcacgacgt
     4141 catagcccag gtagcccatg aggcccccgt gtaacggagg aagatcttcg atggtcggcg
     4201 accggaagtg ttccaggagg tcttcgagag cggccagcat cccggcgtcg gtacggatcc
     4261 ccgccggaag gtcaccgctg acgtcaaggt cgccaccggc gccgtgggag gtaagggtga
     4321 gcgacgggtt acgaccgatg aacgaccacc ggccccaggt ctcgccccgg tcgacgcttt
     4381 cgagcagaaa gccctctccg tcacccacgc aacgggcgta cagagagacc ggggtggtga
     4441 gatcggcaag caactcgcgc cagaccggca cgacggcgtg gccgcgcgcc agcgctcgga
     4501 actcctcgcg atcagggctg accacaggaa gagtcgctgg atcagccagc gtcgactacc
     4561 gcgtcggacg cggcccccgg tccgaacgga cggaagaaac agctgtactc gcccgtgtgg
     4621 caggcgccct tcccctcctg ttcgaccacg aagagcaggg tgtcggcatc gcagtcgtaa
     4681 tacgcctcac gcacgtactg gcgatcgcct gaggtctcgc ccttgcacca gtattcccgg
     4741 cggctacggc tccagaacca ggtcctccc
//
LOCUS       DASCMR010000233         3028 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001113928, whole genome shotgun sequence.
ACCESSION   DASCMR010000233 DASCMR010000000
VERSION     DASCMR010000233.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3028)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3028)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3028
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001113928"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..653
                     /locus_tag="QGG16_05540"
     CDS             <1..653
                     /locus_tag="QGG16_05540"
                     /inference="COORDINATES: protein motif:HMM:NF041238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alkylhydroperoxidase-related (seleno)protein"
                     /protein_id="HJP24770.1"
                     /translation="DELDAAHGEAMDEWSSAGTWWTGAQRLAMVAEVRRARDADTLAP
                     WESPSAVDGLIPDGHPLPDAVVDLVWRLTNHPGTLTPEWHASILGRGVEALAYVEVVS
                     IVAQVNCVDRFADALELDRVPVPEAQPGEPDGQVPADAEVRLHWVPTVDIGGPNVWLA
                     LSGVPSELEARSRLSTPHYLEGRAVFGDVVSDRFSLQRVQMELVAARTSKLNECFY"
     gene            708..1028
                     /locus_tag="QGG16_05545"
     CDS             708..1028
                     /locus_tag="QGG16_05545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24771.1"
                     /translation="MTLEAIGGSGNGDGGVRHGDLLVRLTEAMWEGEPGPLAAVREEL
                     LAVAGADVLVDAVAVSANFHMMTRVADGTGTPLDPDTDAASVDFRNEIEVNDLVSRRH
                     VLAS"
     gene            complement(1048..1914)
                     /locus_tag="QGG16_05550"
     CDS             complement(1048..1914)
                     /locus_tag="QGG16_05550"
                     /inference="COORDINATES: protein motif:HMM:NF014615.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homocysteine S-methyltransferase family protein"
                     /protein_id="HJP24772.1"
                     /translation="MTTLLDGGMGQELIRRGSPRSAEFWSAWAMIEDPDLVRGVHADY
                     VAAGCDVLTTNSYSTFANRLEPHGLGGRSDELCRAAGRLAREAADTSERSVRVAGSLP
                     PLRHSYNPTPEATYEELLGEYTVMVDQLNEHVDIFLCETMGALHEARAATDAARISGK
                     EVWTSFTLQGGTGPHLLDGTSFDRACSEIQADLYLLNCCPPEQITEALPVLRDATDRP
                     LGVYANAFCDMPLGWRGRDGSPLPSARTDMGADPYTAMVLSWVEMGVDVVGGCCEIGP
                     NHIARIRQALDA"
     gene            2030..2854
                     /locus_tag="QGG16_05555"
     CDS             2030..2854
                     /locus_tag="QGG16_05555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24773.1"
                     /translation="MGALLGALSAMSVGCSEMFGRKGSLAAGVLAVGVVSQGVAAVTA
                     LVLALALSGEFLWPDLARGALSGVGFGVGMVTYLGGVIRSSSTVVSPLVATMTVVLPF
                     SVAVSGGEEASILAFTGVGVAILGLVFITVGGRATVGVRQGFLWGMTSGLGYGLGLSV
                     LIDTSSASGPWPAAAQRLVACILTVLLAVALRQSVLPSKGVRWPPLASGTFGGIASAL
                     YVLGVQADALPAAVTGAMFPAVSVAVGRVVFGDVVKPPQLLGLGLVLAGVSGVVAG"
BASE COUNT          498 a          895 c         1051 g          584 t
ORIGIN      
        1 gtgacgaatt ggatgctgcg catggggagg ccatggacga atggtccagt gcgggaacgt
       61 ggtggaccgg agcgcaacga ctcgccatgg ttgccgaagt acgccgggcc cgagacgccg
      121 acactctcgc cccgtgggag tcgccgtcag cggtcgatgg gctgattccg gatggccatc
      181 cgctgcccga cgctgtggtc gacctggtgt ggcggctcac caaccaccca ggaaccctga
      241 cccccgagtg gcatgcctca atcctcggcc gaggtgtgga ggcactggcc tacgtcgagg
      301 tggtgtcgat cgtggcccag gtgaactgcg tcgaccggtt tgccgacgct ctggaactgg
      361 atcgtgtacc ggtaccggag gcgcagcccg gagaacccga cgggcaggtg cccgccgacg
      421 ccgaggtacg cctgcactgg gtgccgacag tcgacatagg aggaccgaac gtctggctgg
      481 cgctcagcgg cgtaccttcg gaactggagg ccaggtcacg gctctcgacg cctcactacc
      541 tggagggtcg ggcggtattc ggcgatgtgg tctcggatcg gttctcgctg cagcgggtcc
      601 agatggaatt ggtcgccgcc cgcacatcga aactgaacga atgcttctac tgaacgacca
      661 gtcacgcgtt gttgctcggt ctgagcggcc tccaccagga caatgaggtg acccttgaag
      721 ccatcggcgg ctcggggaac ggtgatggtg gagttcgaca cggcgatctg ctcgtccgat
      781 tgaccgaagc catgtgggaa ggagagccgg ggcccctggc agcggtacgc gaggaactct
      841 tggcggtcgc cggagccgac gttctggtcg atgccgtggc ggtgagcgcc aacttccaca
      901 tgatgactcg ggtcgctgac ggcacaggta cgccgttgga ccccgacacc gatgctgcct
      961 ctgtggattt ccgcaacgag atcgaggtga acgacctcgt gtcacgacgc catgtcctgg
     1021 cgtcgtgatc ggttgaggtg ccgtaggtca ggcgtctagt gcctgtcgga tccgggcgat
     1081 gtggttgggt ccgatctcac aacatccgcc aaccacatct acgcccatct ccacccacga
     1141 gagcaccatc gcggtgtaag gatcggcacc catgtcggtc cgggcggagg gaagggggct
     1201 tccatcacgg ccccgccagc ccagcggcat gtcgcaaaac gcgttggcgt agacacccaa
     1261 cggccgatcg gtggcgtcac gaagtaccgg aagggcctcg gttatctgtt caggtggaca
     1321 acagttcaga aggtagaggt cagcctggat ctcgctacag gcccggtcga aggatgtgcc
     1381 atccagcagg tgggggccgg tcccgccttg aagggtgaac gaggtccaca cctctttccc
     1441 actgattcgt gcggcatcgg tggcggcccg agcctcgtgg agggcaccca tggtctcaca
     1501 gaggaagatg tcgacgtgtt cgttgagctg gtcgaccatg acggtgtact cacccagcag
     1561 ttcctcgtag gtggcctccg gtgtggggtt gtagctgtgg cggagtggcg gcagtgaacc
     1621 ggcgactcgg acggaacgtt ccgatgtatc ggcggcttcc cgggcaaggc ggccggcggc
     1681 ccggcacagc tcatcagacc gtccacccag accatgaggc tccagcctgt tggcgaacgt
     1741 cgagtaactg ttggtagtca gtacgtcaca gcccgcagct acataatcgg cgtgtacgcc
     1801 tcgaacaaga tccggatcct cgatcattgc ccaggctgac cagaactcgg ctgagcgggg
     1861 tgacccacgc cgaatcaact cctggcccat acccccgtcc agcagcgtcg tcatcgggtc
     1921 ctccgggagg cggtgtgtct gatcgagaaa cactaggtgc ctgtggacaa ggggcctatt
     1981 gtccagcgat gttcagcccg gtgatgtcga gcatggagag ggtcttctga tgggcgctct
     2041 gctcggtgct ctcagcgcca tgtcggtcgg gtgctctgag atgttcggtc ggaagggctc
     2101 gctcgctgcc ggggtgctag ccgttggtgt ggtctctcag ggtgttgcgg cggtgacagc
     2161 actggtgtta gcgctggccc tctccggcga gttcctgtgg cccgacctcg cccgcggcgc
     2221 actgtcgggg gtggggttcg gcgtggggat ggtcacctac ctcgggggcg tgattcgtag
     2281 ctcctctacg gtggtctccc cgttggtggc caccatgacc gtggtgctgc cgttcagcgt
     2341 cgcggtatcc ggcggcgagg aggcgtcgat tctggccttc accggcgtcg gggtggcaat
     2401 actcggtctg gtgttcatca ccgtgggcgg ccgtgcaacg gtaggggttc gacaggggtt
     2461 tctgtgggga atgacgtcgg gcctcggcta cgggcttgga ctctcagtgc tgatcgacac
     2521 gtcatcagcc agtggcccgt ggccggccgc cgcccagcga ctggtggcct gcatccttac
     2581 agtcctgctg gccgtcgcac tccgccaatc ggtgctgccg tcgaaagggg tccggtggcc
     2641 tccgctggcc tcaggaacgt tcggaggcat tgcttctgcg ttgtacgtcc taggtgtcca
     2701 ggctgacgcc cttcccgccg cggtgaccgg tgcgatgttc ccggcggtga gcgttgccgt
     2761 tggccgtgtg gtgtttggtg atgtcgtcaa acccccacaa ctgctgggcc tgggtctggt
     2821 cttggccggg gtgtcaggtg tagtagccgg atgattcagt ggactgcgcg aggctgtgca
     2881 gcatgagtga ctttgagact gacgggcaca ccggcagccc agaaaccggc ggagcgccgg
     2941 tcctgtacga agaacgagat gacctggcga tcatcacgtt gaaccgcccg gataagaaaa
     3001 acgcgttgac cgatgcggtg atcgaggg
//
LOCUS       DASCMR010000234         6218 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001115316, whole genome shotgun sequence.
ACCESSION   DASCMR010000234 DASCMR010000000
VERSION     DASCMR010000234.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 6218)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6218)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6218
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001115316"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..254)
                     /locus_tag="QGG16_05560"
     CDS             complement(<1..254)
                     /locus_tag="QGG16_05560"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24774.1"
                     /translation="MKRFTRVLALLLTFTMVAAACGSDDDGDAAPATTAAPATTAAPA
                     TTAAPAAPAADSSDAIKLPIHNWSSQIAGVYAVGAILEATG"
     gene            complement(327..1580)
                     /locus_tag="QGG16_05565"
     CDS             complement(327..1580)
                     /locus_tag="QGG16_05565"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HJP24775.1"
                     /translation="MRGRPNLYISYESESQLMPTTTKKVLLGLFLLVLVLMPFDLPVI
                     DQIPFVRFLGENVWLRLINRTMCFAIAALGLNILMGLAGQISIGHTFFGGVGAYTAVL
                     VGGKGSANLWGWGLPMWLWLPAAGVVAAVVGIAVAPAAVRVRGLYLGIVTLGLIFIGL
                     HLSRVFPEIAGPGALGRKWPRMELRLWKEEEPILDFSRDGHWFWFDINKNQKTYLFLL
                     VVLILMAWMAANLARSRTGRALQAIRDRDVAAEIMGVPEYRYKTTAFAISSFYAGIGG
                     ALFASLSVQLPPEQWGLIGAVNFIAALLIGGMGRVSGVLMGSFFVMTSHRFVEEIVDW
                     MKHQVEEEGTFSALFDFFISTGRGDGGVVSVMETALGYPLPVSALDDIIFGLLIIFFL
                     LFEPQGLYGIWIKIRNYWKGWPFSY"
     gene            complement(1577..2551)
                     /locus_tag="QGG16_05570"
     CDS             complement(1577..2551)
                     /locus_tag="QGG16_05570"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HJP24776.1"
                     /translation="MSGLPLVLAANAFDTFVQTLFKALALGSLYALLALGFVLIYKAT
                     QTVNFAQGALALAGTWFLSIIFMDWNVPGRWIGGPGWFHWFIALVLAAAATGVLGLVI
                     ERLTIRPMIGEPVFSMAVITLGLEVVVRVVAFDAVNTTPRVLGIPWGAETFKIGGAMV
                     AWSYVAAIGMAAAAFLGTWQFFKTRTGVAMRATAFDQEAALAQGISVGRIFAIAWAVG
                     SALAAISGIFASMPPWGPAGMASREGAFFAFRALPAVILGGLDSALGALVGGLIVGFA
                     EVFAGQYLARYTGVLGAGYQQVVPYVVMLIGLLVRPYGLFGTKEIRRV"
     gene            complement(2548..4392)
                     /locus_tag="QGG16_05575"
     CDS             complement(2548..4392)
                     /locus_tag="QGG16_05575"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJP24777.1"
                     /translation="MSDVPASTVTVASLARDWASREPSRIAMREKDFGIWQEISWLET
                     WELVLDAAHGLLALGVQVGDRVSIQAEDRPEWVILDLATVAVRGVTVGFYPTNPTAEV
                     EYLLTDCESTVHLAEDQEQVDRVLEIDRAGLGNLTRILYCEPRGVRQYDDERLLDWND
                     FLDLGRDHRAAHEGAVEALMEAAEGDDVMTLVYTSGTTGPPKGAMLTNVNTAYAIGKI
                     TAEDGLRGKRAPTADDLVVTYLPLCHVAERIFSTWHMVSCGLCLNFAESIETVTINLR
                     EVQPTLFFAVPRIWEKLHASVLIRGNDASPFKRLWLRFGLRLATVIGRDKAANGGSHT
                     VRSRLLAAIGNPLVFRAMRERIGLRRCWHAGSGAAPIAPEVLEFFMGIGVPVYELYGM
                     TENAAVATTNVPGRMILGTVGEPYPDIGFRLDPETGEIQTKHPGVFAGYWNKPEQTAE
                     TFTDDGWLMTGDVGEWVDDSHVRIIDRIKHIIITAGGKNISPSEIENSLKTSLYVKEA
                     MVIGDRRKFLSALIGIELDTVGDWALRRNIPYTTYRDLSEKPEVLELIQGVVNETNNK
                     FARVESIREFRMIPKELDHEDGELTATQKIKRSSMEEAFNELIEEMYA"
     gene            4632..5897
                     /gene="xseA"
                     /locus_tag="QGG16_05580"
     CDS             4632..5897
                     /gene="xseA"
                     /locus_tag="QGG16_05580"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HJP24778.1"
                     /translation="MVEPSGELPVLSVEDLSHLLKDGLTTLFPEDLWVEGQISGFHDA
                     RSGHAYFDLVEPSDVPGRAVAAKLSVALFKGARPGVDQTLASAGGLALGNDLQLRIRA
                     RLDFYPPSGRLQLIMHGVDPTFTLGLLAAERDRLLHALADEGLLRANRANLIPVPPLR
                     IGLVTSVGSAAHADFTDELVRSGLPFEVLEHDARVQGHGSAVDLAEALSVVATHQPDV
                     IALIRGGGSATDLAAFDAEVLARTIAALDVAVVTGIGHEIDRSVADEAAHTALKTPTA
                     CAAALVEQVQAFSDAVDGLRMTIADRARAAVDRASDRLDEVAHRTNRSASAGLTRHAD
                     QIETATTRFVRSPGTFLDRQGGQLDGLAARVRALDPIRILARGWSITRRTDGSLVRTA
                     DDVSTGDTLVTTLAGGQVASTVDDNNPAS"
     gene            5909..6142
                     /gene="xseB"
                     /locus_tag="QGG16_05585"
     CDS             5909..6142
                     /gene="xseB"
                     /locus_tag="QGG16_05585"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR01280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HJP24779.1"
                     /translation="MTTDGDLPGYAEALDELQQILGTLESDTADVDLLAERVQRADVL
                     IRHCRSRLDDARLHVTRVIAALDPEAAEQQSDS"
BASE COUNT         1329 a         2001 c         1799 g         1089 t
ORIGIN      
        1 ccggttgcct ccaggatcgc accaacggcg tagacgccgg cgatctggga cgaccagttg
       61 tggatcggca acttgatggc atccgacgaa tccgcagccg gcgcagctgg cgcggccgta
      121 gtagccggcg cagccgtagt agccggcgca gccgtagtag ccggcgcagc atccccatcg
      181 tcgtcgctgc cacaggccgc ggcgaccatc gtgaatgtca gcagtaacgc caacactctg
      241 gtaaatcgct tcatgtcagt aatcccctca tgttgttggt tcccagtggg cccaataggc
      301 cctgagattt gttggcgggc ggcggctcag tagctgaacg gccacccctt ccagtagttg
      361 cgaatcttga tccagatccc atagagccct tgaggttcga atagtagaaa gaagatgatc
      421 aggaggccaa agatgatgtc atcaagggca ctaactggca acgggtagcc aagagcggtt
      481 tccattaccg agacaacgcc cccatcgcca cgacccgtac tgatgaaaaa atcgaacaga
      541 gccgagaatg tcccttcctc ttcgacttgg tgcttcatcc agtcgactat ctcctcgaca
      601 aagcgatggg acgtcataac gaaaaaggaa cccatcaaaa ctccggacac tcgtcccatc
      661 ccaccaataa ggagggctgc gatgaaattc actgcaccaa tgagacccca ctgttcagga
      721 ggtagctgca cagagagtga ggcaaacaga gccccgccaa tcccggcgta gaaagacgaa
      781 atcgcgaacg ctgtggtctt gtaacggtat tcgggcacac ccatgatctc ggcagcgacg
      841 tcacgatccc ggatggcctg cagagcacga ccagtcctgc tccgagccag gttggcagcc
      901 atccacgcca tcaggatgag aacaaccagc aggaacagat aggtcttctg gttcttgttg
      961 atgtcgaacc agaaccagtg gccgtccctg gagaagtcga ggattggttc ctcctctttc
     1021 cagagacgga gctccattct tggccacttt cgacctagag cacctgggcc cgcgatctca
     1081 ggaaagactc gcgataggtg gagtccgata aagatcaggc caagagtgac aatgcccagg
     1141 tacaggccac gaactcgaac tgcagcgggg gccaccgcta tgcctactac cgcagcgact
     1201 accccggcag caggaagcca gagccacatc ggaaggcccc acccccaaag gttcgcagaa
     1261 cccttacccc cgaccaagac ggccgtatag gcaccgacgc caccaaagaa ggtgtggcca
     1321 atagagatct ggccggccaa gcccatcaag atgttgaggc caagcgcagc aatggcaaag
     1381 cacattgtcc tgttgatcaa ccgaagccaa acgttctcgc ccagaaagcg aacgaacgga
     1441 atctgatcga tgaccggaag gtcgaaaggc attagcacga gaaccaagag aaaaagaccc
     1501 aagagaacct tcttggtggt tgtcggcatg agctgcgatt cgctctcata cgagatgtaa
     1561 aggttcggtc gacccctcat actcgccgaa tctccttagt gccgaacagg ccgtacggcc
     1621 tgaccagaag gcctataagc atgacgacgt agggcacgac ctgttggtag ccggccccaa
     1681 gtacccctgt gtacctagcg aggtattggc cagcaaacac ttccgcgaaa ccaacgatga
     1741 gaccaccaac aagtgctccg agggccgaat ccagaccacc gagaatgacc gctggcagtg
     1801 ctcgaaaagc aaagaacgct ccttcccggc tggccatgcc tgccggtccc caaggtggca
     1861 ttgatgcaaa gatcccagag attgcagcaa gagcagaccc aaccgcccag gcgatggcga
     1921 agatccgtcc gacactgatg ccctgggcca atgcggcttc ctgatcaaac gctgtggccc
     1981 gcatggcgac accggttcgc gtcttgaaga actgccaagt cccgagaaag gcagcggctg
     2041 ccatgccaat ggctgccaca taggaccagg cgaccatcgc acctccgatc ttgaaggtct
     2101 cggcacccca tgggataccg aggacccgag gcgttgtgtt aaccgcatca aaggcaacga
     2161 cgcggaccac tacttcaagg ccgagggtga tgacagccat cgagaagacg ggttcaccaa
     2221 tcatcggccg gattgttagc cgctcgatga caagcccaag cactcccgtc gcggctgccg
     2281 ccaacaccag cgcgatgaac cagtggaacc agcccgggcc accgatccag cgtccgggaa
     2341 cgttccaatc catgaaaata atggacaaga accaagtacc agccagggcc aaggccccct
     2401 gggcgaagtt gaccgtctgg gtggccttgt agataaggac gaatccgagc gccagaagcg
     2461 cataaagcga ccctagagct aaggccttga agagagtctg gacgaaggtg tcaaaggcgt
     2521 tggcagccaa caccagaggg agaccactca cgcgtacatc tcttctatga gctcattgaa
     2581 tgcttcctcc atggaagacc tcttgatctt ctgggttgct gtgagctcgc cgtcctcatg
     2641 gtccagttcc ttgggaatca tccggaactc ccggattgac tcgacccggg cgaacttatt
     2701 gttggtctcg ttcaccacgc cctggatcag ctccaagact tcgggcttct cggaaaggtc
     2761 acggtaggtg gtgtagggaa tgttccttct cagggcccag tcacccacgg tgtccaactc
     2821 gatcccgata agcgccgaga ggaacttccg acggtcgcct atgaccatgg cctccttgac
     2881 gtacaacgag gtcttgaggc tgttctcgat ctccgacggc gagatgttct taccgcccgc
     2941 cgtaatgatg atgtgcttga tccggtcgat gatccggaca tgagaatcgt ccacccactc
     3001 gccgacgtcc ccggtcatga gccatccgtc gtcggtgaac gtctctgccg tctgctcggg
     3061 cttgttccag tagccggcaa agaccccggg gtgcttcgtt tggatctcgc cggtctcggg
     3121 gtccaggcga aaaccgatgt cggggtacgg ctcaccgacc gtgcccagaa tcatccgacc
     3181 cgggacattg gtggtggcca ctgccgcgtt ctcggtcatg ccgtaaagct cgtagacggg
     3241 tacgccgatg cccatgaaga actcgagcac ctcgggggca atgggcgcag caccggaccc
     3301 tgcgtgccag caccgccgca acccgatgcg ttctctcatg gctcggaaga ccaatgggtt
     3361 gccaatggcg gccagcaggc gactccgaac ggtatggctt ccaccattgg ccgccttgtc
     3421 ccggccgatc acggtggcca ggcgaagtcc aaaccggagc cagaggcgtt tgaacggtga
     3481 ggcatcgttg cctctgatca acactgaggc gtggagtttc tcccatatgc ggggaacggc
     3541 aaagaacaac gtgggctgga cttcgcgcag attgatcgtg acggtctcaa tcgattccgc
     3601 gaagttgagg cacagcccgc acgagaccat gtgccacgtg gagaagattc gttcggccac
     3661 atggcacaac gggaggtagg tgaccacaag gtcatcggcg gtcggcgccc gctttcccct
     3721 caatccgtcc tcggccgtga tctttccgat ggcataggcc gtgttgacgt tggtcagcat
     3781 cgcccccttc gggggcccgg tggttccaga ggtgtagacg agggtcatca catcgtcgcc
     3841 ctccgctgcc tccatgagcg cctcgacagc gccctcgtgg gccgctcggt gatccctgcc
     3901 caggtccagg aagtcgttcc agtccagtag acgttcgtcg tcgtactggc gtactccccg
     3961 gggttcgcag tagagaatcc tcgtgaggtt gccgagcccg gcccgatcga tctccagaac
     4021 ccggtcgacc tgttcctgat cctcggcaag atggaccgtc gactcacaat cggtgagcag
     4081 gtactccacc tctgccgttg ggttggtcgg atagaaaccc acggtgaccc cacggacggc
     4141 cacggtggcc aggtccaaga tcacccattc cgggcgatcc tcagcctgga tggacacccg
     4201 gtcacccacc tgtactccga gggccaagag tccgtgggcg gcatcgagca ccagttccca
     4261 ggtctcgagc caggagatct cctgccagat gccgaagtcc ttctcccgca tggcaatacg
     4321 ggagggttcg cgcgatgccc agtcccgagc gaggctggcc acggtgaccg tcgacgccgg
     4381 cacgtcagac ataggacgtt cctcgagcgt tatagccatg tttcaccccc ttaagttcca
     4441 ccggccgctg aaccatcggc cgctggacca tagaaattgc ctgcccgata gccaatactt
     4501 ggaatatctg gccttaaacc atctaggcga gatacaggaa agtaacccaa ggtagagacg
     4561 tcggtccaag gtcggccatg acattctggt gacgaacccc agcctggaat caccacggct
     4621 aggttcgact cgtggtcgaa ccatcgggtg agctccccgt gttgtccgtc gaggacctct
     4681 cccacctact caaggacgga ctgaccaccc tgttccccga agacctgtgg gtcgagggcc
     4741 agatatcggg cttccacgat gcccggagtg gccacgccta cttcgacctg gtggagccat
     4801 ctgacgtacc gggacgagcg gtagccgcca agctcagcgt ggccctcttc aagggagcgc
     4861 gccccggcgt agaccagacg ctggcctcgg ccggcgggtt ggccctcggc aacgacctgc
     4921 aactccgtat ccgggcacgg ctcgacttct acccgcccag cggtcgcctc caactgatca
     4981 tgcacggcgt cgaccccacg ttcactctgg gactgttggc cgccgaacgc gaccgcctgc
     5041 tccatgctct ggccgacgag gggctgctac gggctaatcg ggccaacctc ataccggtgc
     5101 cacccctgcg aattgggctg gtgaccagcg tgggttcggc agcccatgcc gacttcaccg
     5161 acgagttggt ccgcagcgga ctgcccttcg aagtgctcga acacgacgca cgtgtccagg
     5221 gccacggctc ggccgtcgat ctcgccgaag ctctgtctgt ggttgctacc caccagcccg
     5281 acgtgatcgc cctgatccgc ggtggtggtt cagccactga cctggcggcc ttcgacgctg
     5341 aggtattggc ccgtaccatt gccgcgctcg acgtagccgt ggtaaccgga atcggacacg
     5401 agatcgaccg ttcggtggcc gacgaagcgg cccatacggc gttgaaaacg cccacggcat
     5461 gtgcggccgc cctcgtcgaa caggtccagg cgttctccga tgccgtcgac ggactgcgaa
     5521 tgaccattgc cgaccgggcc cgagctgctg tcgaccgagc cagtgaccgt ctcgacgagg
     5581 tagcccaccg aaccaaccgg tcggcatcgg ccggactgac ccgccacgcc gaccagatcg
     5641 agacggccac cactcgtttc gtcaggagtc caggaacctt cctggaccga caaggcggac
     5701 aactcgacgg cctggccgcc cgggtacgcg ctctggaccc catccggata cttgcccgtg
     5761 gctggtcgat cacccgacgg accgacggct cgctggtccg cacggccgac gacgtgagca
     5821 ccggcgacac cctggtcacg acgctggccg gcggtcaggt ggcgagtacc gtcgacgaca
     5881 acaacccggc cagctaggag ggcgaccagt gaccaccgat ggggacctgc ccggctacgc
     5941 cgaagccctc gacgaactcc agcaaatcct cgggaccctg gagtccgaca ccgccgacgt
     6001 ggacctgctg gccgagcggg tgcagcgggc cgacgtactt atccgccact gccgttcccg
     6061 tctcgatgac gcccgtctcc acgtcacccg ggtaatcgcc gctctcgacc ctgaagccgc
     6121 tgaacagcag tcggacagct gaccggtgtt catccgcaag ctcacctcta ccgacgcctt
     6181 cgtggccatc gacctcaccg atgtggccgg gaccggcg
//
LOCUS       DASCMR010000235         1825 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001118480, whole genome shotgun sequence.
ACCESSION   DASCMR010000235 DASCMR010000000
VERSION     DASCMR010000235.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1825)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1825)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1825
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001118480"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..350)
                     /locus_tag="QGG16_05590"
     CDS             complement(<1..350)
                     /locus_tag="QGG16_05590"
                     /inference="COORDINATES: protein motif:HMM:NF016060.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HJP24780.1"
                     /translation="MRERLRRFAVVGLVATTIDVGLAVLLLGAGWSPWSADVVALGLA
                     AVAARLLHRSVTLRDDPYARWIRLKRVFVTVVVVAGLVDLATLTAGRTLLDGTDAGGS
                     EDWRIDLAAKLVAVL"
     gene            complement(347..>1825)
                     /locus_tag="QGG16_05595"
     CDS             complement(347..>1825)
                     /locus_tag="QGG16_05595"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24781.1"
                     /translation="RRRFGFVLAGSAVLLGLAFVHLPEGRLYNGRILPAYYLSIYLLA
                     AVALSEGLRLAGRLLDGVRRSATGRPGRLVAGGGAVAVFLAVVILLGMPLRVMPGGSM
                     DGNTYRWMGMESTELNLGRQWVRWNFEGYEARVGDSSGGGWEEQRELASTMENLADEV
                     GCGRLMWEYSSDLVRYGTPMALMLLPHWTDGCIGSMEGLYFEASTTTPYHFLVQSELS
                     EGPSRAQRGLPYRGFDLDAGADHLRQLGVRWYSAFSERAVREARDHPGLVEKASSGPW
                     TIFEVEGAEAVVALDVEPAVFTDVDHESWLDPSVEVFQQGSTAVPRTVGGPGSWQRVE
                     AGTEPERRPLPAVEVTNVVSGVDSVSFRVDRVGVPVLVRTSYFPNWKVEGADGPWRTT
                     PNLMVVVPTSEDVRLTYGRTPVDVVSVLLTLVGLLALVSLARRSAVPSEPATPENALF
                     DVAAAGPDGDRRLDRWVDRRVANEPSEEPESSESAAGEHGES"
BASE COUNT          330 a          665 c          583 g          247 t
ORIGIN      
        1 agtacggcga ccagcttggc agcgaggtcg atccgccagt cttcggaccc accggcgtcg
       61 gttccgtcca acagggttcg accggccgtg agggtggcga gatcgaccag cccggccacc
      121 acgacgaccg tgacgaagac ccgcttgagg cggatccagc gggcgtacgg gtcgtcgcga
      181 agcgtcaccg accggtgcag caggcgggct gccacggcgg ccagacccag agccacgaca
      241 tcggccgacc acggagacca accagctccc agcaggagga cggccaggcc gacgtcgatc
      301 gtcgttgcca ccaggccgac gaccgcaaac cgacggagac gttccctcat gactcgccgt
      361 gctccccggc cgccgactcc gaactctccg gttcctccga aggctcgttg gctacccggc
      421 gatccaccca tcggtccagc cgccggtcac cgtcggggcc agcggccgct acgtcgaaca
      481 atgcgttctc cggtgttgcc ggttcagaag gaacggccga ccggcgggcc agagacacca
      541 gggccagtag tccgacgagg gtcaacagga ccgagaccac atcgaccggc gttcgaccgt
      601 aggtcagacg gacgtcttcg gacgtcggga ccaccaccat caggttcggc gtggtccgcc
      661 acggaccgtc ggcaccctcc accttccagt tggggaaata ggacgtgcgg actagcaccg
      721 gtacgccgac ccggtcgacg cgaaatgaca ccgagtccac cccgctcacg acgtttgtga
      781 cctcgacagc gggcagcggc cgacgttccg gttcggttcc ggcttccact cgttgccacg
      841 acccggggcc accgaccgtt cgcggaacag cggtcgaacc ctgctggaag acctccaccg
      901 acggatccag ccagctctcg tgatccacgt cggtgaacac cgccggctcc acgtcgaggg
      961 ccaccacggc ttcggcgccc tccacctcga agatggtcca cggcccgctg gacgccttct
     1021 cgaccaggcc cgggtggtcc ctcgcttcgc gcacggcccg ctccgagaag gccgagtacc
     1081 accgtacgcc gagttgccgg aggtggtccg cgccggcgtc taggtcaaag ccccggtacg
     1141 gaaggccacg ctgggctcgc gacggcccct ccgagagttc cgactggacg agaaagtggt
     1201 acggcgtggt ggtcgaagcc tcgaagtaga ggccttccat ggaaccgatg caaccgtcgg
     1261 tccagtgagg caggagcatc agggccatgg gcgtcccgta ccgaaccagg tcgctgctgt
     1321 actcccacat gagacggccg caacccacct cgtcggccag gttctccatg gtggaggcca
     1381 actcccgctg ttcctcccag ccaccacccg acgagtcgcc gacccgggcc tcgtagccct
     1441 cgaagttcca gcggacccac tgccgaccga ggttcagttc ggtcgattcc atgcccatcc
     1501 accggtaggt gttgccgtcc atggacccac caggcatgac ccgcaggggc atcccgagca
     1561 ggatcaccac cgccaggaac acggcgacgg cccctccccc ggccaccaga cggcccggcc
     1621 gtccggtggc agatcgtcgg actccgtcga gtagtcggcc cgcgaggcgc agcccctccg
     1681 acagggcgac cgcggccagc aggtagatgc tcaggtagta ggcgggcagg atccggccgt
     1741 tgtagaggcg gccctccggc aggtgcacga aggccagtcc gagcagaacc gccgatccgg
     1801 ccaggacgaa tccgaagcgt cggcg
//
LOCUS       DASCMR010000236         1715 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001137506, whole genome shotgun sequence.
ACCESSION   DASCMR010000236 DASCMR010000000
VERSION     DASCMR010000236.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1715)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1715)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001137506"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..760)
                     /gene="tilS"
                     /locus_tag="QGG16_05600"
     CDS             complement(<1..760)
                     /gene="tilS"
                     /locus_tag="QGG16_05600"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: protein motif:HMM:TIGR02432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HJP24782.1"
                     /translation="MDRATEGLTGPQSVDPPGEPVANGADPTAPLLDRCAFPPAGTAV
                     DCAVSGGPDSTALLVLAVAAGLEVTCWTVDHGLRSTSADEVRLVAHNALSLGVSTITV
                     DGLVVDGPDLEQRARDIRRAALPVGVLTGHTADDQAETVLLNLFRGAGVPGTAGIGEP
                     DRRPLLALRRTETRGLCTALGLKVVDDPSNDDPRFTRNRVRHEVLPLLADVAGRDPVP
                     LLARHATLAGEATGLLAGLVVDVDPADVRSVDDLP"
     gene            complement(736..>1715)
                     /locus_tag="QGG16_05605"
     CDS             complement(736..>1715)
                     /locus_tag="QGG16_05605"
                     /inference="COORDINATES: protein motif:HMM:TIGR03624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="zinc-dependent metalloprotease"
                     /protein_id="HJP24783.1"
                     /translation="SRAEDLVAATTGLRSLSGSARARVVGRDDWIRANVASMQRLLRP
                     LFERLGDAAEGGTDSDESDAPSALTVRMGGMELGVVLGWMSTRVLGQYDLLVVEDEAA
                     EDQDIVYYVGPNLVALERRYAFPRHDFRLWLALHEVTHRAQFTGVPWMRSHYLGLVQS
                     LLDGAQPESFDLVASLKGLVDNRAAKRSAGGGGESGAAGSGVLGAISSPEQQVALDRI
                     AGLMSLLEGHGDVTMGRAGEGIVHGADRMAGVMADRRRNASGVTRLFQKLVGLEAKLV
                     QYAQGEAFIGAVEAHGGTALLDRVWEDPSHLPDLGEIREPDRWIERLKA"
BASE COUNT          288 a          637 c          563 g          227 t
ORIGIN      
        1 caggcaggtc gtccacggac cgcacgtcgg ccgggtccac gtcgaccacc agcccagcga
       61 gcaaaccagt ggcctcgccg gccagcgtgg cgtgacgagc caacaagggc acgggatctc
      121 gcccggccac atcggccagc agggggagca cctcgtggcg gacccggtta cgggtgaagc
      181 gggggtcgtc gttactcgga tcgtcgacca ccttcaggcc gagcgccgta cacagtcctc
      241 gggtctcagt ccgacgcagg gccagcaacg ggcggcgatc cggctcacca atacccgccg
      301 ttccgggcac gccggcaccc cggaaaaggt tcagtagcac ggtctcggcc tggtcgtccg
      361 cggtgtggcc ggtcagcacc ccgacaggca gggcggcccg ccggatgtca cgggcccgct
      421 gttcgaggtc ggggccatcg accaccagcc cgtcaaccgt gatggtcgaa accccgaggc
      481 tcagagcgtt gtgggccacc agacgaacct cgtccgccga ggtagaacgc agcccgtggt
      541 ccacggtcca gcaggtgacc tccaggccgg cggcgacggc cagcaccagt agcgccgtcg
      601 agtccggccc accggatacc gcacaatcca cggcggttcc ggcgggcggg aaggcacacc
      661 gatccagcaa cggcgccgtc ggatcggcac cgttggccac cggttccccg ggcgggtcaa
      721 ccgactgggg cccggtcagg ccttcagtcg ctcgatccac cggtccggct cacggatctc
      781 tcccagatcg ggcaggtggg acgggtcctc ccagacccgg tccagtagcg ccgtaccccc
      841 gtgggcctcc actgctccga tgaacgcctc accctgcgcg tactgcacca acttggcctc
      901 aaggcccaca agcttctgga acagccgggt cacccccgaa gcgttgcggc ggcgatcagc
      961 catgacgccg gccatgcggt cggcgccgtg cacgatgccc tcaccggccc ggcccatggt
     1021 cacgtcgcca tgtccctcca ggaggctcat gagtccggcg atacggtcca gtgccacctg
     1081 ctgttcgggc gatgagatgg cacccagcac ccccgaacca gctgcaccgg actccccgcc
     1141 gcccccggcc gaccgcttcg ctgcccggtt gtcaaccaga cccttcagcg aggccaccag
     1201 gtcgaacgac tcgggttggg cgccgtccaa cagggactgc acgagtccca ggtagtgcga
     1261 ccgcatccac ggcacgccgg tgaactgtgc ccggtgggtg acctcgtgga gggccagcca
     1321 gagccggaag tcgtggcggg ggaaggcgta gcgccgctcg agggccacca gattgggacc
     1381 cacgtagtac acgatgtcct ggtcctcggc cgcctcgtcc tccaccacca gcaggtcgta
     1441 ctgaccgagc acccgggtag acatccagcc caggaccacc cccagttcca tgccgcccat
     1501 ccggacggtc aacgccgagg gggcatccga ctcgtcgcta tcggtcccgc cttcagcagc
     1561 gtcgccgagg cgctcgaaga ggggtcgtag caggcgctgc atggaggcca cgttggcccg
     1621 gatccagtcg tcccgaccga ccacccgggc ccgggcgctg cccgacagcg agcgtaggcc
     1681 ggtggtagcc gccacaaggt cttcggcacg cgagg
//
LOCUS       DASCMR010000237         1655 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001142316, whole genome shotgun sequence.
ACCESSION   DASCMR010000237 DASCMR010000000
VERSION     DASCMR010000237.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1655)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1655)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1655
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001142316"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..877
                     /locus_tag="QGG16_05610"
     CDS             <1..877
                     /locus_tag="QGG16_05610"
                     /inference="COORDINATES: protein motif:HMM:NF012398.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HJP24784.1"
                     /translation="VNLITGFGEPCGRALTSHPMVDKVAFTGGVETARHVVANTVHNL
                     APVTLELGGKSPILVFDDADFESAVNGAVAGNFGASGQSCVAGSRVFVQSGIHDEFVA
                     EVVRRAEQIRIGDPHADETQMGPLATVAQRDRIEDVVAESTAQGATLHTGGCRPEGLD
                     AGWYYRPTVLSCPDQNIRSTRVELFGPVMSVLRFDTEDEAVAMANDTEFGLGAGIFTP
                     DVSRVHRVSKAIRSGIIWVNTYRAVSPIAPFGGFGNSGSGREAGMDAIHEFTTTKTVW
                     INTSTEPMANPFTIR"
     gene            922..>1655
                     /locus_tag="QGG16_05615"
     CDS             922..>1655
                     /locus_tag="QGG16_05615"
                     /inference="COORDINATES: protein motif:HMM:NF012503.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HJP24785.1"
                     /translation="MHKFDESTEDLASAIFHYSLDRVRTDPPLDGPRSHQELWEAVGQ
                     TITEEGLGGETVLTAFADHLAPACLSSDHPRFLSFVPGAPTNASVLFDLVVGASAMCA
                     ASWLEAAGTVYAENQALRWVADLVGLPEDAGGCFASGGTMGNLSALIAGRDQAMRRRE
                     ATGSGRPARWSVVASDGAHSSIDSAARVMDVDVLLAATDDDRRLRGDAVRAAIAARPE
                     DTEVFAVVATAGTTNLGVVDALDEVA"
BASE COUNT          284 a          535 c          558 g          278 t
ORIGIN      
        1 agtgaacctc atcaccggct tcggtgagcc gtgcgggcgt gcgctgacca gccatccgat
       61 ggtcgacaag gtggcgttca ccggtggagt cgagacggcc cgccacgtgg tggccaacac
      121 cgtccacaac ctggcgccgg tgaccttgga gctcggtgga aagtctccga tcctcgtgtt
      181 cgacgacgcc gacttcgaga gcgctgtcaa cggagcggtg gccggcaact tcggagcatc
      241 cggacagagt tgtgtggccg gctcccgggt gtttgtgcag tcggggatcc acgacgaatt
      301 cgtggccgag gtcgtccgac gcgccgagca gatccgtatc ggtgacccgc acgctgacga
      361 gacacagatg ggaccgctgg ccaccgtggc ccaaagggac cggatcgaag acgtagtggc
      421 cgagtcgacc gcccaggggg cgacgctgca cacaggcggc tgccgccccg aagggctgga
      481 cgccggttgg tattaccgcc ccacggtctt gagctgcccc gaccagaaca tccgtagcac
      541 ccgagtcgag ctattcggtc ctgtcatgtc ggttctccgg ttcgacaccg aggacgaagc
      601 ggtagccatg gccaacgaca cagagtttgg tctaggagca ggcatcttca cccctgatgt
      661 gtcacgggtg caccgggtat cgaaggccat ccggtccggc atcatctggg tcaacaccta
      721 ccgggccgtc tctcctatcg ccccgttcgg cgggttcggc aacagtggtt caggacgcga
      781 ggccggcatg gatgccatcc acgagttcac gaccaccaag acggtctgga tcaacacgtc
      841 aaccgaaccg atggccaacc cgttcaccat ccgatgacca agccgagcgg agacgggagg
      901 ccatggtcgt ccggggtgga aatgcacaag ttcgacgagt cgaccgaaga cttggcctcg
      961 gccatcttcc actattccct cgatcgggtg aggacggacc cgcccctgga cggtcctcga
     1021 tcccatcagg aactctggga ggcggtcggg cagaccatca ccgaggaggg cctcggaggg
     1081 gagacggtac tcacagcctt tgccgaccac ctggcaccgg cctgcctgtc gagcgatcat
     1141 cctcggttcc tgtccttcgt cccgggcgct cccacgaatg cctcggtcct gttcgacctg
     1201 gttgtcgggg catctgcgat gtgcgccgcc tcttggttgg aggcggcagg caccgtgtac
     1261 gccgagaacc aggccctccg atgggtcgcc gacctggtgg gtcttccgga ggacgccgga
     1321 ggctgcttcg cctccggggg gaccatggga aacctgtcgg cactcatagc gggccgtgac
     1381 caggcgatgc gtcgccgaga ggcgaccggg tcgggtcgcc cggccaggtg gtcggttgtg
     1441 gcctccgacg gtgcccactc ctcgatcgac tcagccgcga gggtcatgga cgttgacgtc
     1501 ctactggcgg ccaccgacga cgaccgtcgc ctccggggag atgcggtgcg cgctgccata
     1561 gcggcaaggc cggaggacac cgaggtgttt gccgtggttg ccacggccgg taccaccaac
     1621 ctgggcgtgg tcgacgcgct cgacgaggtg gccga
//
LOCUS       DASCMR010000238         1918 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001143948, whole genome shotgun sequence.
ACCESSION   DASCMR010000238 DASCMR010000000
VERSION     DASCMR010000238.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1918)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1918)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1918
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001143948"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1066
                     /locus_tag="QGG16_05620"
     CDS             <1..1066
                     /locus_tag="QGG16_05620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004013 - adenosylhomocysteinase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HJP24786.1"
                     /translation="LEWPDGEGPNLILDDGGDATMIVHKGAEYEAAGAVPPASEDDPE
                     EWQVIIATLTASLLDDPQRWTRIAAGIRGVSEETTTGVHRLYQMKEAGELRFPAINVN
                     DAVTKSKFDNLYGCRHSLIDGINRGTDVMIGGKTAVVCGFGDVGKGCAESLRGQGARV
                     IVTEVDPICALQAVMQGYEVNTLERVLDEADIFITATGCKDIVTAAHMGKMKHQAIVG
                     NIGHFDNEIDMAGLARMSDVQRINIKPQVDEFVFPDGHSVIMLSEGRLLNLGNATGHP
                     SFVMSASFSNQVLAQMELHARAEAYGTDVVTLPKELDEKVARLHLDSLGVRLTELSDD
                     QADYLGVPVDGPFKPTHYKY"
     gene            1160..1789
                     /gene="udk"
                     /locus_tag="QGG16_05625"
     CDS             1160..1789
                     /gene="udk"
                     /locus_tag="QGG16_05625"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: protein motif:HMM:NF004018.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004849 - uridine kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HJP24787.1"
                     /translation="MRSAVLGLAGGSGAGKTTLVNGLTSRLGDDASVLWFDEYYHDLA
                     HLPVEQRAVVNYDHPDSLDEALLIDHLDGLLAGRAVDVPIYDFASHTRTGRTRRVEPR
                     PVVVVDGILVLAVPELRQRLDLAVFVDAPAEIRLARRMDRDVRERGRTAAMVQSQFEA
                     TVAPMHEAFVGPSALHADLHMDGTADMVANLDTLMGAVEHLHSSHMQSS"
BASE COUNT          346 a          638 c          631 g          303 t
ORIGIN      
        1 cctcgaatgg cccgacggtg aaggccccaa cttgatcctc gacgacgggg gtgacgccac
       61 catgatcgtc cacaagggcg ccgagtacga ggcggccggt gcggtaccgc cggccagcga
      121 agacgacccg gaagagtggc aggtgatcat cgccacgctg accgcctcac tgcttgacga
      181 cccacagcgt tggacccgga tcgccgcggg catccgaggg gtgtctgagg agacgaccac
      241 cggtgtgcac cggctgtacc agatgaagga ggcgggcgag ctgcgcttcc cggcaatcaa
      301 cgtcaacgac gccgtaacca aatccaagtt cgacaatctc tacggttgcc gccactccct
      361 gatcgacgga atcaaccggg gcaccgacgt gatgatcggc ggcaagaccg ccgtggtgtg
      421 cggcttcggc gacgtgggca agggctgcgc cgagtccctg cgtggtcagg gcgcccgggt
      481 catcgtgacc gaggtcgacc cgatctgcgc gctgcaggcc gtaatgcagg gctacgaggt
      541 caacacgctg gagcgtgtgc tcgacgaggc cgacatcttc attacggcca ccggttgcaa
      601 ggacatcgtc accgcggcac acatgggcaa gatgaagcat caggccatcg tcggcaacat
      661 cggccacttc gacaacgaga tcgacatggc cggcctagcc cgtatgtcag atgtccagcg
      721 catcaacatc aagcctcagg tcgacgagtt cgtcttcccg gacgggcact cggtgatcat
      781 gctgtccgag ggccgcctcc tgaacctggg caacgcgact ggccacccca gcttcgtgat
      841 gtcggccagc ttctcgaacc aggtcctggc ccagatggaa ctccacgcca gggccgaggc
      901 ctatggaacc gacgtggtca cgctgccaaa ggaactcgac gagaaggtgg cccgactcca
      961 cctcgactcc cttggcgtgc gcctgaccga gctgtccgac gaccaggccg actatctcgg
     1021 cgtgccggtc gacggcccgt tcaagcccac ccactacaag tactgagccg cccaccagtt
     1081 ggccggatgc ctccaggtac cgggccgttg gccgttggcc gttggccgtg ccggacctgt
     1141 ccccctaggc ttgactcccg tgcggagcgc ggtgctgggc ctggccggag gtagtggagc
     1201 ggggaagacc acgctggtca acggcctcac gtcccgcctc ggcgacgacg cgtcggtgct
     1261 gtggttcgac gagtactacc acgacctcgc ccacctgccg gtcgagcaga gggccgttgt
     1321 caactacgac catccggact cgttggacga ggcgctgctg atcgaccatc tcgacggcct
     1381 gctggccggc cgggcggtcg acgtaccgat ctacgacttc gccagccaca cccggaccgg
     1441 gcggacccga cgggtggagc ctcgccccgt agtggtagtc gacgggatcc tggtcctggc
     1501 tgtgccggaa ctgcggcaac gtctcgacct ggcggtcttc gtggatgcgc cggccgagat
     1561 ccggctggcc cgtcgcatgg atcgagacgt gcgtgagcgt gggcgaacag cggccatggt
     1621 gcagtcccag ttcgaggcga ccgtggcgcc catgcacgaa gcgttcgtgg gaccgagtgc
     1681 cttacacgcc gacctgcata tggacggcac agcagacatg gttgcgaacc tcgacacgct
     1741 gatgggcgcg gtcgaacacc tgcattccag ccacatgcaa tccagctaac agcgcctcag
     1801 actgcgggat ggggacttca ccgggacgct cgcacctcgt ccgtcgcgtc cagcccatga
     1861 cgggcgagga tcaggtgtgg atgtcagggg acccggcgcc ggcagtcggt tcgtgccg
//
LOCUS       DASCMR010000239         3296 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001147161, whole genome shotgun sequence.
ACCESSION   DASCMR010000239 DASCMR010000000
VERSION     DASCMR010000239.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3296)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3296)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3296
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001147161"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..293
                     /locus_tag="QGG16_05630"
     CDS             <1..293
                     /locus_tag="QGG16_05630"
                     /inference="COORDINATES: protein motif:HMM:NF012609.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="PEP-utilizing enzyme"
                     /protein_id="HJP24788.1"
                     /translation="TVEGLARVVLDPSDPLTLEPGEILVAPITDPSWTPLFVPAAGVV
                     VDVGAVMSHAVIVSRELGIPCVVSAAGATTRILDGARIRVNGDTGTVTILQD"
     gene            complement(316..1299)
                     /locus_tag="QGG16_05635"
     CDS             complement(316..1299)
                     /locus_tag="QGG16_05635"
                     /inference="COORDINATES: protein motif:HMM:NF024852.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HJP24789.1"
                     /translation="MRVMLTGATGFIGGHTLAALMTAGHEVRALVRDGDKLDRMLAMH
                     GIDGSANKVEAVLGDMTDLDAVTTALEGCDACVHTAAFTSLDPEQMHHALEVNAPGAV
                     NVLNAAAAAECDPIVHLSTMSVIFPPTGDVLSGDDPVQGGGNPYNASKAVAEEHARAM
                     QDNGMPVSIIYPAGVTGPDDLGLNVLAATFIPTLSTEMMMSLASGGWLLVDVRDLGAA
                     IAGLMTPGRGPKRYVAGGTYMTWDEFHARVTEATGRDRALFPTPASALKGMVDDEAVE
                     IMLGIVPGDDAALLADSGLGEWRPVTETLADTARWLIAGGLLDPEWAPACT"
     gene            1509..1706
                     /locus_tag="QGG16_05640"
     CDS             1509..1706
                     /locus_tag="QGG16_05640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HJP24790.1"
                     /translation="MKIKVDAERCEGHSRCYSLAPELVDVDDLGNAFELNDGEVPAGL
                     QDKARLIVDNCPEFAITIEEG"
     gene            1710..2975
                     /locus_tag="QGG16_05645"
     CDS             1710..2975
                     /locus_tag="QGG16_05645"
                     /inference="COORDINATES: protein motif:HMM:NF012296.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HJP24791.1"
                     /translation="MTKTTDTHGDPAADAVAASIPERCPVSDVTTDYDMFDADYLRDP
                     FTAWAEMRDRCPIAHTDRYGGSWLPTKYDDLQAMAKMVPELSSKSPIVIDLPEALVKG
                     DSTGYNAAAPITADPPEQNWTRRALLPHFTPKGIAAETEYTKRLCHELIDGFIENGSC
                     DAAVDYAQQIPPRVIAKKLGVDASMVDDFIEWVRGVLELGLQQPELRAKYRDIIREFF
                     AAEVADRRANPKDDLITALCQTEHEGSFLPDEVIIGMCNLQLVAGIDTTWSSIGSALW
                     HLASHDDDRRRLIDEPDLWNTAVEELLRFYAPVTMARNAAEDIEYGGVKFKKGDKILM
                     NFPGANHDPDHFEDAHEVHLDRQRNRHVAFGIGIHRCAGSNLARMEMEVALKTWMERI
                     PEFTLSDPDAVTWAGGQVRGPRILPVTFS"
     gene            complement(2980..>3296)
                     /locus_tag="QGG16_05650"
     CDS             complement(2980..>3296)
                     /locus_tag="QGG16_05650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24792.1"
                     /translation="GRREVALLFDSDGGFGAGGTATLAVDGQVVGQARLEQTVPVVFA
                     MGGESFDVGTDTGSPVGPYPHGFTCTATIGSVTVELLSEVDETTRTAVAAGIFHAESV
                     AQ"
BASE COUNT          611 a         1151 c         1005 g          529 t
ORIGIN      
        1 gcaccgtcga gggactagcc cgggtggtgc tcgacccatc ggacccgctg accctcgaac
       61 cgggcgagat cctggtcgcc ccgatcaccg atccgtcatg gacgccgttg ttcgtgccgg
      121 ccgccggggt ggtggtcgac gtgggcgccg tgatgagcca cgcggtgatc gtgagccgcg
      181 aactgggcat cccatgcgtt gtgtcggctg cgggcgccac gacgcggatc ctcgacggtg
      241 cccgcatccg ggtaaacggc gacaccggca ctgtcaccat tcttcaggac taagtcggcc
      301 tccgaagggc tggcctcagg tgcaggcggg ggcccattcg gggtcgagca ggccgccggc
      361 gatcaaccac cgggcagtgt cggccaacgt ctcggtcacc gggcgccact cgcccagacc
      421 gctgtcggcc aatagggccg cgtcgtcgcc ggggacgatg ccaagcatga tctcaaccgc
      481 ctcgtcgtcg accatcccct tcaacgcgga cgcaggcgtc gggaacagcg cacgatcgcg
      541 gccggtcgcc tcggtaaccc gggcgtggaa ctcgtcccac gtcatgtagg tgccgccagc
      601 cacgtatcgc ttcgggcccc gaccaggtgt catcaggccg gcaatggctg cgccgaggtc
      661 acggacgtcg accagcagcc atccacccga agccagactc atcatcatct cggtggacag
      721 cgtgggaatg aaggtggccg ccaacacgtt cagccccaga tcatcgggcc ccgtcacccc
      781 ggccggatag atgatggata ccggcatacc gttgtcctgc atggcccgtg cgtgttcctc
      841 ggccaccgcc ttggatgcgt tatacgggtt tccccctccc tgcaccggat cgtcgccgga
      901 gagcacgtca ccggtcggcg gaaagatcac cgacatggtc gacaggtgga caatggggtc
      961 acactcggcg gccgctgcgg cgttgagcac attgaccgct ccgggggcgt tgacctccag
     1021 cgcgtggtgc atttgctcgg gatccagact ggtgaacgcc gcggtatgga cgcaggcgtc
     1081 gcagccctcg agcgcagttg tcacggcatc gaggtcggtc atgtcgccga gcacggcctc
     1141 aaccttgttc gctgaaccgt cgatgccgtg catagccagc atccgatcca acttgtcgcc
     1201 atcgcgcacc agtgcccgca cttcgtgccc ggccgtcatc agggcggcca gcgtgtggcc
     1261 tccgatgaac cctgtcgctc cggtcaacat gacccgcatc gccgattccc cttccgcccg
     1321 gcaccgtgcc gggaacaatc ggaccgtagc cccctgttgg taccggcgat cagcccgaac
     1381 cgttgataac accgattatc cacgagtctg ctggcgcgct atcctgtctc cagaggttag
     1441 ccaaacggct aatagcatct acaggtcgtg aaaacacatg gaccggggtt ccgggggaga
     1501 tgacaccgat gaagatcaag gtcgatgccg aaagatgtga aggccatagc cggtgctact
     1561 cgctggcccc cgagctggtt gacgtggacg acctaggcaa cgccttcgag ttgaacgacg
     1621 gcgaggtgcc cgccggactc caggacaagg cccgcctcat tgtcgacaac tgccccgagt
     1681 tcgccatcac catcgaggag ggctgatcca tgaccaagac caccgacacc cacggcgatc
     1741 cagctgccga cgcggtggcc gcctccatcc ccgagcgctg cccggtctcc gatgtcacca
     1801 ccgactacga catgttcgac gcggactacc tgcgcgaccc cttcacggcc tgggccgaga
     1861 tgcgagaccg ctgcccgatc gcccacaccg accgctacgg cggctcatgg ctccccacga
     1921 agtacgacga ccttcaggcc atggccaaga tggttcctga actgtcgtcc aagtcgccca
     1981 tcgtgatcga cttgcccgag gcactcgtca agggcgactc cactggctac aacgcggccg
     2041 cccccatcac cgcagacccg cctgagcaaa attggacccg ccgggccctg ctcccccact
     2101 tcactcccaa gggcatcgca gcggagaccg agtacaccaa gcggctctgc cacgaactca
     2161 tcgacggatt catcgagaac ggcagctgcg acgcagcagt cgactacgcc cagcagatcc
     2221 cgccccgggt catcgccaag aagctcggcg tggacgcctc catggtggac gacttcatcg
     2281 agtgggtccg cggtgtgctt gagctgggcc ttcaacagcc cgagctgcgg gccaagtacc
     2341 gcgacatcat tcgcgagttc ttcgccgccg aggtggctga ccgacgagcc aacccgaagg
     2401 acgacctaat cactgccctc tgtcagacgg agcacgaagg cagcttcctg cccgacgagg
     2461 tgatcatcgg catgtgcaat ctgcagctgg tggccggcat cgacaccacc tggtcatcga
     2521 tcggctcagc cctgtggcac ctcgccagcc atgatgacga tcggcgacgc ctgatcgacg
     2581 agcccgacct gtggaacacc gcggtcgagg agctgctgcg tttctacgcc ccggtgacca
     2641 tggcccgtaa cgcagccgag gacatcgaat acggcggggt gaagttcaag aagggcgaca
     2701 agattctcat gaacttccct ggcgccaacc acgaccccga ccacttcgag gacgcccacg
     2761 aggtgcatct ggaccgccag cggaaccgac acgtggcctt tggtatcggc atccaccggt
     2821 gtgcgggctc gaacctggcc cgaatggaga tggaagtagc gctcaagacc tggatggaac
     2881 gcatccccga gttcacgctg tcagatccag acgccgtgac gtgggccggc ggccaggtgc
     2941 gcggaccccg catcctccca gtcacgtttt cctagggcgc tactgggcga ccgactcggc
     3001 gtggaatatc ccggcggcca cggcggtccg ggtggtctcg tccacctcgc tcagcaactc
     3061 gacggtgacg ctaccgatgg tggccgtgca cgtgaaccca tgggggtagg gccccaccgg
     3121 tgatccggtg tcggtaccta cgtcgaagct ctcgcccccc atggcaaaca ccacgggcac
     3181 cgtctgttca agacgagcct ggcccacgac ctgaccgtcc accgccaacg tagcggtacc
     3241 accggcgccg aagcctccgt ccgaatcgaa caacagcgct acctcccggc ggccgg
//
LOCUS       DASCMR010000240         2542 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001152932, whole genome shotgun sequence.
ACCESSION   DASCMR010000240 DASCMR010000000
VERSION     DASCMR010000240.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2542)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2542)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2542
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001152932"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1338)
                     /locus_tag="QGG16_05655"
     CDS             complement(<1..1338)
                     /locus_tag="QGG16_05655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24793.1"
                     /translation="MTTKILRTRYGQPATAVLAGVIRDAKGGDPLAPVTVIVSDHSLG
                     VTLRRRLAATSVMADTTGGTTGLAAVDFVTLLDLARGISAGSPHIAARRAVSDAVVLA
                     ATRRLLADRPGVFSPVADHPSVERTVMAAHRNLREVHPEALDRLAEIGGALSDLVVLH
                     RALVERLEPIFHDEYERAVVAAARIADGSVDLPPVVLHLPGTLVASERRLVGALATTG
                     HLTAIVGDADSPDGSVSANPHLAALTETLDVDAPEAGPAGSRVACLVASTPEQDESVR
                     YAIRRIIEAARAGTPLDRMVLVHPSTTDDARLVQERLTAAGIEFHASGVHRLDETIAG
                     RFLIGLLDLPDRGIRRTDLDALMADVPLWDPDHDLVPARAWGRLAAQAGVVSGVDEWT
                     DRLAHLAAELDAEAVSEVDDEGRTWLADRLSAEATRARQLATFVERLCASLHGL"
     gene            1473..>2542
                     /locus_tag="QGG16_05660"
     CDS             1473..>2542
                     /locus_tag="QGG16_05660"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJP24794.1"
                     /translation="MSDDADQNLQYPGRWAAEAPDRPAIVMAETGETVTFAELDAEAN
                     RISRVLHGLGIGPGDHVAFCLENRIEFLALTWGAHYAGCYYTAISSRLTADEIAYIVD
                     DCGARAFVTSPYKADDVAEIAAATPNVEARFSIGGPIEDHACFEDAVAAQSADPLPDR
                     TEGQDMLYSSGTTGRPKGVKSPLSGAPLGQASSISAMAEALFGATPGSVYLSPAPLYH
                     AAPLRFCLGAHRLGCTVVVMERFDAEGALAAIQDHGATWSQWVPTMFVRMLKLPDEVR
                     AAYDLSTLGSAIHAAAPCPVDVKRRMIEWWGPVLHEYYAGTEGNGLTYTNSVDWLAHP
                     GTVGKALLGEVLILDDDGNEVPT"
BASE COUNT          394 a          824 c          911 g          413 t
ORIGIN      
        1 gaggccatgg agggatgcgc agagtcgctc cacgaaggtc gccagttgtc gggctcgtgt
       61 ggcctcggcc gataagcggt cggccagcca ggttcggccc tcgtcgtcga cttcggatac
      121 agcttcggca tcgagttcgg cggccaggtg ggcgaggcga tcggtccact cgtcaactcc
      181 gctgactact ccggcctgag cggccagccg accccaggcg cgtgccggga ccagatcgtg
      241 gtcgggatcc cagaggggca cgtcggccat cagggcgtcg aggtcagttc ggcggatccc
      301 ccgatcggga agatcgagga gtccgatcag gaagcgtccg gcgatcgtct cgtcgagtcg
      361 gtggacgccg ctggcgtgga attcgatgcc tgccgcggtg agccgctcct ggaccagtcg
      421 ggcgtcgtcg gtggtcgacg ggtgaactag gaccatgcgg tccagcggcg taccggcccg
      481 tgccgcctcg atgatccgtc ggatggcgta gcggacggac tcatcctgtt ctggggtgga
      541 tgccacgagg cacgcgaccc gcgatccggc aggtcccgcc tcgggcgcgt cgacgtcgag
      601 ggtctcggtc agggcagcga ggtgggggtt ggccgacacc gatccgtccg ggctgtcggc
      661 atcgccgacg atggcggtga ggtggcctgt ggtggctaac gcacctacga gtcggcgttc
      721 ggaggcgacg agtgtgccgg gtaggtggag gacgaccggt ggtaggtcga ccgatccgtc
      781 ggcgatccgg gcggcggcga cgacggcccg ttcgtactca tcgtggaaga tcggttcgag
      841 ccgctcgacg agtgcccggt ggaggacgac gaggtcggac aacgcaccac cgatttccgc
      901 cagacggtcg agagcttcgg ggtggacttc gcggaggttg cggtgggcgg ccatgacggt
      961 gcgttccacc gaggggtggt cggccaccgg actgaaaaca ccgggacggt cggccagcag
     1021 ccgtcgggta gcggccaaca ccacagcgtc actgacggca cgccgggcgg caatatgggg
     1081 tgaaccggcc gatatgccac gggcgaggtc aagcagggtg acgaagtcga cggcggcgag
     1141 gcccgtcgtg ccacccgtcg tgtcggccat gacgctggtg gccgccagtc gtcggcgcag
     1201 cgtcactcca agggaatggt cggacacgat cacggtcact ggggcgaggg ggtctccacc
     1261 cttcgcgtct cggatcacgc cggctagtac cgccgtcgcg ggctgcccgt acctcgtccg
     1321 caggatcttt gtcgtcatcg tgaagggaac actatggacc ccctgtgaca gcccgaggcc
     1381 tggctcggat ttagttccca tccgtggcca cagacccggt tcccgatgcc cacttctcgt
     1441 cgaaaggagc ccggccgata agttccgcag ccatgagcga tgacgccgac cagaacctgc
     1501 agtaccccgg tcgttgggcc gctgaggctc ccgaccgtcc ggccatcgtc atggcggaaa
     1561 ccggtgagac cgtgacgttt gccgagttgg atgccgaggc caaccgcatc tcccgggtcc
     1621 ttcacggcct gggcatcggg cccggtgatc atgtggcgtt ctgcctcgag aatcggatcg
     1681 agttcctagc gctgacctgg ggcgcccact atgccggctg ctactacacg gccatctcgt
     1741 cacgcctgac ggccgacgag atcgcctaca tcgtcgacga ctgcggagcc cgggccttcg
     1801 tgacatcgcc ttacaaggcc gacgacgtgg ccgagatcgc cgctgccacc ccgaacgtcg
     1861 aggctcggtt ctccattggc gggccgatcg aagatcacgc ctgcttcgag gacgcggtgg
     1921 ccgcccagtc ggccgacccc ctgcccgacc ggaccgaggg tcaggacatg ctctactcct
     1981 cgggcaccac gggtcgaccc aagggcgtga agtcgccgtt gtcgggggcg ccgctgggcc
     2041 aggccagctc gatctcggcg atggccgagg ccctgttcgg ggccacgccc gggtcggtgt
     2101 atctgtcgcc ggcaccgctg taccacgccg ctccgctccg cttctgcctg ggcgcccacc
     2161 gactggggtg cacggtggtc gtcatggagc gattcgacgc cgagggtgca ctggcggcca
     2221 tccaggacca tggcgccacg tggagccagt gggtgccgac catgttcgtc cggatgctca
     2281 agctgcccga cgaggtacgg gccgcctacg acttgtcgac gctcggttcg gcgatccacg
     2341 ccgcggcgcc ctgtccggtc gacgtgaagc gccggatgat cgagtggtgg ggcccggtgc
     2401 ttcacgagta ctacgcgggc accgagggca acggcctgac gtacaccaac tcggtggact
     2461 ggctggccca tccgggcacg gtcggcaagg ccctgctggg cgaggtactg attctcgacg
     2521 acgacggcaa cgaggtgccg ac
//
LOCUS       DASCMR010000241         6289 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001156169, whole genome shotgun sequence.
ACCESSION   DASCMR010000241 DASCMR010000000
VERSION     DASCMR010000241.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 6289)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6289)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6289
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001156169"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            227..1669
                     /locus_tag="QGG16_05665"
     CDS             227..1669
                     /locus_tag="QGG16_05665"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HJP24795.1"
                     /translation="MRADSFLTAAGGGPRSDVADAALADSAPTVLWLDQPARPVAAPA
                     LDGPTTADLVVVGGGFTGLWTALCAVEADPGRTVVVLEANETAAGATGRNGGFCDASL
                     THGLENGVAHWPKEIADLVRLGDENLGDIVATIDRHDIDCGAERTGELNVAVTDWQAV
                     ELADAMDVHLAHGIEATLLDAPTTRSRVDSPLYRAGLLIPNRTVMLDPARLAWGLRTA
                     AESLGVRFHDHSAVRSLEATLSSIRVETDQGTVTTDRAVVATNAYRSPIRAIRKRVAP
                     VYDHVLATEPLSSTQLASLGWMGREGLSDVGNQFHYYRLTPDNRILWGGWDALYHFGN
                     RVDPGHEQSESTTRTLARHFLATFPQLEGIRFTHRWGGPIAATSRFTCTWGTSHRGRA
                     AWVAGYTGLGVGASRFGARVALDLVDGITSERTSLEMVRRAPFPFPPEPLRWPAIQLT
                     RRAIKDCDRRDGRRGPWLSLLDRFGIGFDS"
     gene            1717..3126
                     /locus_tag="QGG16_05670"
     CDS             1717..3126
                     /locus_tag="QGG16_05670"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HJP24796.1"
                     /translation="MDNLEEPRDDRAVSFWHDTVPGSLDPRPALQGDRDADVAIVGAG
                     FTGLWTAYHLLRIDPGLRVVVVEREIAGFGASGRNGGWALGEYSISPMDWAARSTPEA
                     AVRQMRGLYDAIDDIGRVAETEGIDCHYAKGGWIDMARSGPQAERIGAGVRARHALGL
                     TDDDVHWVDGDEARSLCNATDVVGGWFNRHVAAIHPSRLVRGLAETVERLGGTIHERT
                     AVSAIHPADPTSSARLETDRGTVRADVVVRATEGYTRDLVGHRRTLVPLYSMMVATEP
                     LPNAVWDEIGLTDRPTFGDGRNLIIYGQRTADGRIAMGGRGAPYQFGSKVSSTTGVHH
                     EVHDKVEASLRQLFPVLGEAAITHRWGGVMGLTRDWVPSCGFDRPSGMAWAGGYVGDG
                     VATAKLAGHTIAELITETASGRTDLPWIGHQARRWEPEPLRWVGVTAGLWMAAGADRA
                     EARTGQPSRRVEWLNRLLR"
     gene            complement(3260..3517)
                     /locus_tag="QGG16_05675"
     CDS             complement(3260..3517)
                     /locus_tag="QGG16_05675"
                     /inference="COORDINATES: protein motif:HMM:NF012675.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin domain-containing protein"
                     /protein_id="HJP24797.1"
                     /translation="MTDETGTTVVYWRRMCGFCTRLLGALEGAGVDVELRDIWEDPEA
                     AAFVRSVNDGAETVPTVVLPDGRAITNPSPDALIAHLTAGS"
     gene            complement(3514..4158)
                     /locus_tag="QGG16_05680"
     CDS             complement(3514..4158)
                     /locus_tag="QGG16_05680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HJP24798.1"
                     /translation="MSSQEVAFENVGPERAPDGRAARTRAALVEATLARLRSDGSFTA
                     EQVATDAGVSVATIYNRFPDGRDGLLAAAFDRALDGVVEASTRPLTAEHLLDHGLSGT
                     MTALVDGLCEAFSADALVMRAALARLPESRSLRDAYRRHEGTARVANRRFVELGQAAG
                     RIVDGDPDELADLLIVLGQGINNPVLLGATDRGRLCARLADALVAVLDPGTERP"
     gene            4226..5401
                     /locus_tag="QGG16_05685"
     CDS             4226..5401
                     /locus_tag="QGG16_05685"
                     /inference="COORDINATES: protein motif:HMM:NF019640.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP24799.1"
                     /translation="MSSLPRVTASDLLPAAQALGPSLAERAERSEAERTLPDDVVADL
                     RNAGLFRLLTPADLGGPEADVATASQVIAEVARHDGGAAWCVMIAGTTSLMAGFLPED
                     VASLVFGSPDSCAGGYAAPVGTATPVDGGLRVSGTWAWGSGTRHCNWIGGGARIVDPD
                     GKPARRADGLVAPFVFFDRDDVEHLDTWHVTGLSGSGSTDYRVEDTFVPEGRWLQMMD
                     ATPRLDGPTWRFPFYGMLAIGIASVSIGLLDGAVDRFGELATAKKPEGSKRTLAERAS
                     GQAALSTAEATARSTRAFLHDAIGEAWTTAAAGDPLTLEHRRSLRLAACDAAQRCADA
                     LITLGREAGGAAVYLREPLQRKIRDGQVAATHAMVAPRIHELTGRLALGLETDTTLL"
     gene            5453..>6289
                     /locus_tag="QGG16_05690"
     CDS             5453..>6289
                     /locus_tag="QGG16_05690"
                     /inference="COORDINATES: protein motif:HMM:NF014789.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP24800.1"
                     /translation="MDFTLPPDDDPRRLEIRVWLDTHPHPDRATLAAGGFIAPHWPGP
                     WGRDADAVTQLIIDDEFQRAGVRIPGASIGVGWAGPTIIAGGTQAQKERFLPPMLANT
                     EDWCQLFSEPEAGSDLASLRTRAVRDGDHYTVNGSKIWSTRADVTDWGILLVRTSDDG
                     PPQKGISYLLLDMTTPGIEVRPIVEMTGGRHFNETFLTDVEIPVENLVGTENEGWRLA
                     KVTLANERVSLSQGGVLWGRGPDDPTLLARIRDLGCEDPILRQRVADLYTEMTVLRLL
                     NQR"
BASE COUNT         1065 a         2234 c         2004 g          986 t
ORIGIN      
        1 tccgttcatc gattcggtcc tccccgtccc tcgtctgaac ccgccggaac ccttctggag
       61 taccggccgg gccactcgcc ctcgggcaca gagggactac tctccatgcc gtgcggcaca
      121 ctactgaatc cgtcgtcgag ctgccagtta tacaatggaa ttcgtcgttc aatagcattt
      181 ctgctacctg ttccgttgga atgaccgaga ccggcaagga cagccgatga gggcggattc
      241 cttcctgacg gccgccggag gaggcccacg cagcgacgtg gcggatgcgg cgctggccga
      301 ctcggccccc acggtgctct ggctggacca acccgcccga ccggttgccg ctccagcgct
      361 agacggtcca accaccgccg acctcgtggt cgtgggcgga ggtttcaccg gattgtggac
      421 cgcgttgtgc gcggtcgagg ccgaccccgg gcggacggtc gtggtgttgg aagccaacga
      481 gacggcagcg ggagcaacgg gacgcaacgg tgggttttgc gacgcctcac tcacccacgg
      541 cctggagaac ggggtggccc actggcccaa ggagatcgcc gacctggtcc gactcggcga
      601 tgagaacctg ggcgacatcg tggccaccat cgaccgccac gacatcgact gcggagccga
      661 gcggaccggt gagttgaacg tcgcagtcac cgactggcag gccgttgagt tggccgatgc
      721 catggacgtg cacctcgccc acggcatcga ggccaccctg cttgacgccc cgaccacccg
      781 gtcccgggtc gactctccgc tgtaccgggc cggactgctg atacccaacc gcacggtgat
      841 gctggacccg gcccgcctgg cctggggcct gcggaccgct gccgagagcc tgggcgtccg
      901 gttccacgac cacagcgccg tccggtcgtt ggaggccacc ctgagcagca tccgggtcga
      961 aaccgaccaa ggcacggtca caacggaccg ggcggtggtg gccaccaacg cctaccgatc
     1021 gccgattcgg gccatccgaa agagggtggc accggtctac gaccacgtac tggctaccga
     1081 gcccctgtcg tcgacgcagc tggcgtccct gggctggatg ggccgggagg gactatccga
     1141 cgtgggcaac cagttccact actaccgcct cacccccgac aaccggatcc tgtggggtgg
     1201 gtgggacgcg ctgtaccact tcggcaaccg ggtggacccg ggccacgaac aaagcgagtc
     1261 gaccacccgt accctggccc gacactttct ggcgaccttc ccccaactgg agggcatccg
     1321 gttcacccac cggtggggcg gcccgatcgc cgccaccagc cggttcacct gcacgtgggg
     1381 cacaagccac cgggggcggg cggcatgggt tgccgggtac accgggctgg gggtgggggc
     1441 cagccggttc ggtgcccggg tggccctgga tctggtcgac ggaatcacct cggaacgaac
     1501 ttcgctggag atggttcgac gggccccgtt tccgttcccc ccggaaccgc tgcgctggcc
     1561 ggccatccag ctcacccgtc gggcgatcaa ggactgcgac cgtcgggatg gacgacgcgg
     1621 gccctggctg tcactactgg accgcttcgg aatcggcttc gacagctgac cgcctggtgg
     1681 tcagactcga accgcccgcc gcctaggttc gacccgatgg acaaccttga ggaaccccgc
     1741 gacgaccgtg ccgtctcgtt ctggcacgac accgtgcccg ggtctctcga cccccgcccg
     1801 gcccttcaag gcgaccggga tgccgacgtg gccatcgtgg gcgccggctt tactggcctc
     1861 tggaccgcct accacctgct gcgaatcgac cccggccttc gcgtcgtggt cgtggaacgc
     1921 gagatcgccg gatttggtgc ctcgggacga aacggaggct gggccctcgg cgagtacagc
     1981 atcagcccta tggactgggc cgcccgatcc accccggagg ccgcggtccg ccagatgcgt
     2041 ggactgtacg acgccatcga tgacatcggc cgagtggccg agaccgaggg cattgactgc
     2101 cactacgcca agggcggctg gatcgacatg gcccgcagtg gcccccaggc cgaacggatc
     2161 ggcgccggcg taagggcccg gcacgccctc gggctaaccg acgacgacgt tcattgggtc
     2221 gacggcgacg aggcccgttc attgtgcaac gccaccgacg tggtcggcgg ttggttcaac
     2281 cgacacgtgg cggccatcca cccgagccgg ctggtgcgag gtctggccga aaccgtagaa
     2341 cgtctgggcg gcaccatcca cgaacggacc gccgtgtcgg ccatccaccc tgccgacccg
     2401 accagttcag cccggctgga gaccgaccgg ggcacggtgc gggccgacgt cgtagtgcgg
     2461 gccaccgagg gctacacccg ggacctggtc ggccaccgcc gcaccctcgt ccctctgtac
     2521 tcgatgatgg tggccactga accactgccg aacgccgtgt gggacgagat cggcctgacc
     2581 gaccgaccca cgttcggcga tggccgcaat ctcatcatct acggccaacg cacagccgac
     2641 ggccgcatcg ccatgggggg aaggggagct ccctaccagt tcggatcgaa ggtctcgtcg
     2701 accaccgggg ttcaccacga ggtacatgac aaggtcgaag cctcgctgcg gcaactgttc
     2761 ccggtactgg gtgaagcggc gattacccac cggtggggtg gcgtcatggg cctgacccgc
     2821 gactgggtcc cgtcgtgtgg ctttgaccgg ccctcgggca tggcgtgggc tggcggctac
     2881 gtgggcgacg gggtggccac cgccaaactg gccgggcaca ccatcgctga actgatcact
     2941 gagacggcga gtggccgcac ggacctccca tggatcggcc accaggctcg gaggtgggaa
     3001 cccgagccac tgcgctgggt gggtgtcacc gctggccttt ggatggccgc aggtgccgac
     3061 cgggcagagg cccgcaccgg ccaaccgtct cgtcgggtgg aatggctgaa ccggctcctg
     3121 cggtagcagc cacggccact cttgcacccc acctgggagc cataggcctt cacaggatca
     3181 gcctcagcga gcccatcgat ctcggttcga ccgatgacaa gccataggcc acggggtcgg
     3241 atcccaccgg cagcgcgacc taggagcccg ccgtcaggtg tgcaattagt gcatcggggg
     3301 acgggttggt gatcgcccgg ccgtcgggca ggacgaccgt gggcaccgtc tcggctccgt
     3361 cgttcaccga gcggacgaaa gctgctgcct ccgggtcctc ccagatgtcc cgcagttcaa
     3421 cgtcgacacc cgcgccctca agcgcgccca gtagacgggt gcagaacccg cacatccgac
     3481 gccaatagac gaccgtggta cccgtctcgt cagtcatggc ctctcggttc caggatcaag
     3541 gacggccacc agtgcgtcag ccagtcgggc acagagtcga ccacgatcgg tagcgcccaa
     3601 caacaccggg ttgttgatcc cctgacccag cacgatgagc aggtcggcca gctcatccgg
     3661 atcgccgtcg acgatccgcc ccgccgcttg gcccaactcc acgaaccgcc gattagcaac
     3721 tcgggccgta ccctcgtgac gtcggtatgc atcgcgtagc gagcgactct cgggtagccg
     3781 ggccaaggcg gctcgcatga ccagtgcgtc ggcagagaag gcttcgcaca ggccgtcaac
     3841 caaagcggtc atcgtcccgg acaacccgtg gtccagtagg tgctccgccg tcagtgggcg
     3901 ggtactggcc tccaccaccc cgtctagcgc ccggtcgaag gcggcggcca gcaggccgtc
     3961 acgcccatcg ggaaaccggt tgtagatggt ggccacgctc accccggcgt cggtcgccac
     4021 ctgctcggcg gtgaacgagc catcactccg taaccgggcc agcgtggcct ccaccagagc
     4081 ggcacgggtc cgggcggccc gtccgtcagg ggcccgttcc ggcccgacgt tctcgaaggc
     4141 gacctcctga ctagacatac tcaaactgta gatcacttct atctagattt gacgtttcta
     4201 gaaggatatt ctatatttgt gccccatgtc ctccctccct agggtgaccg cgtccgatct
     4261 actccccgcc gcccaggcac tcggaccgtc gctagccgaa cgcgccgaac gctccgaggc
     4321 cgaacgcacc ctgcccgacg acgtggtggc agacctacgc aatgcagggc tatttcgcct
     4381 cctcaccccc gccgacctag gcgggccgga ggccgacgtg gccaccgcat ctcaggtgat
     4441 cgccgaggta gcccgccacg acggcggcgc ggcgtggtgt gtgatgatcg ccgggaccac
     4501 ctccctcatg gccgggttcc tgcctgagga cgtggcctcc ctggtcttcg gctccccaga
     4561 ctcctgtgcc ggcggatacg ccgcccctgt gggaaccgcc accccagtcg acggaggcct
     4621 acgcgtctca gggacctggg catggggctc aggtacccgc cactgcaact ggatcggcgg
     4681 aggtgcccgc atcgtcgacc ccgatggaaa accggcccgc cgggctgacg gcctggtagc
     4741 tccgttcgtg ttcttcgacc gcgacgacgt cgagcacctc gacacctggc acgtcaccgg
     4801 actctctggc agtgggtcga ctgactaccg cgtcgaggac accttcgtcc ccgagggccg
     4861 gtggctccag atgatggacg ccacccctcg cctcgacggc cccacctggc gcttcccctt
     4921 ctacggaatg ctggccatcg gcatcgcctc ggtgtccatc ggcctcttgg atggcgccgt
     4981 cgaccgattt ggcgagttgg ccacagccaa gaagcccgag ggctcaaaac gaacgctggc
     5041 tgaacgagcc tccggtcagg cggctctctc caccgctgaa gccaccgccc gatccacccg
     5101 ggccttcctg cacgacgcca tcggcgaggc gtggaccaca gcagcagccg gcgaccccct
     5161 caccctcgag caccgacgca gcctcagact ggcggcctgc gacgctgccc agcgctgcgc
     5221 cgacgcctta atcacactcg gacgtgaggc gggtggagca gcggtgtacc tccgagaacc
     5281 gcttcagcga aagatccgcg acggccaggt cgccgccact cacgcaatgg tggctccccg
     5341 cattcacgag ctcaccggcc ggctggccct cggtctcgag accgacacca cccttctcta
     5401 gggactggtc tctagggtct ccggaacacc actccccaac cggcagaaac ccgtggactt
     5461 cactcttcct cccgacgacg atccgagacg cctcgagata cgcgtctggc tggacaccca
     5521 tccacacccc gatagggcca cgctggccgc cggtggattc attgccccac actggcccgg
     5581 tccatgggga cgcgatgccg atgccgtcac ccaactcatc atcgatgacg agttccagcg
     5641 ggctggggtt cgcatccccg gtgcctccat cggtgtcggc tgggctgggc cgaccatcat
     5701 cgccggcggt acccaggccc aaaaggagcg cttcctccca ccgatgctgg ccaacaccga
     5761 ggactggtgc caattgttca gtgagcccga ggccggctca gatctggcgt cgctgcgcac
     5821 cagggccgtg cgtgacggcg accactacac cgtgaacggc tccaagatct ggtccacccg
     5881 ggccgatgtc accgactggg gcatcctgct ggtccgaacc tccgacgacg gcccgcccca
     5941 gaaaggcatc tcgtacctac tgttggacat gaccacaccg ggcatcgagg tccgtcccat
     6001 agtggagatg accggtggcc ggcacttcaa cgagacgttc ctaaccgacg tggagattcc
     6061 tgtcgagaat ttggtgggca ctgagaacga gggctggcgc ctcgccaaag taacgctggc
     6121 taacgaacgg gtgtccctct cccagggtgg cgtgctatgg ggccgcggcc ccgacgaccc
     6181 aacgctgctg gcccgcatcc gcgatctggg ctgtgaagac ccgatccttc gccaacgggt
     6241 ggctgacctc tacaccgaga tgacggtgtt gcgccttctg aaccagcgg
//
LOCUS       DASCMR010000242        18903 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001158352, whole genome shotgun sequence.
ACCESSION   DASCMR010000242 DASCMR010000000
VERSION     DASCMR010000242.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 18903)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18903)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18903
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001158352"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..791
                     /locus_tag="QGG16_05695"
     CDS             <1..791
                     /locus_tag="QGG16_05695"
                     /inference="COORDINATES: protein motif:HMM:NF013720.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aminomethyltransferase family protein"
                     /protein_id="HJP24801.1"
                     /translation="GLWLRKQAQEMGLHAWVRDSTDQLHNVQVQGPLSREILSEVIWT
                     RPDQASIDELGWFRLSVARIGDEHGIPIVVSRTGYTGELGFEVFCHPSDAPEVWDAIW
                     AVGRPKGLTPLGLEALDMLRIEAGLIFAGSEFNDQTTPLEAGIGFTVPIKTKEDDFIG
                     RDALVRGKEHPQRTLVGLELSGDEPAGPGNPIMIARQQVGTITSGTRSPILGKNIALG
                     WMAVEHAEIGTEVEVGQMDGHQKRLPATVVRFPHYDPDKERVRS"
     gene            complement(788..2005)
                     /locus_tag="QGG16_05700"
     CDS             complement(788..2005)
                     /locus_tag="QGG16_05700"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HJP24802.1"
                     /translation="MTGERRCEVAVVGAGMLGASAARHLADAGCDVVLVGQAEPTDRQ
                     THGGVFGSHHDVARVSRIIDPDPVRAWLGYRSVSQFTEVAARTGIDPVNPVGHLWVDS
                     PAGIDLLAEADVRYGLCCQRRGAAEAIESMEFLSLPDECETLWEPPPAGSVDPRAHVA
                     SETAAAVAAGATQVVALVDSVLEGAVGPVSVSTDMGVIAADRVLLATGAFSGYGKSPA
                     AGLDLEYALHTQLLVHLDAAEVDRLAGMPSIIGKFPDPVDDFYLTPPVRDHLVGHPPG
                     SEDRHILKVGVPEDDHVRATAAELVAWFRTDGDPVVALRLERILGGLLPGLRDMGRRT
                     TSCVTTYTPSGFPFIDLLGDQVKGRTYCAIGGNGFAAKCAPALGELAAGLILGRDWPT
                     EVDRELFRVRFLD"
     gene            complement(2069..2419)
                     /locus_tag="QGG16_05705"
     CDS             complement(2069..2419)
                     /locus_tag="QGG16_05705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24803.1"
                     /translation="MTAAVRLRVAEVAAAVVVISSFLPWTVEDDRTLRGVQVGDGQVI
                     VLTAVVTIVMIRLGSRLAWFAAGFSAAVLWRQWFEDDVGLQSLGPLLGALAASVAVGL
                     LVWNLLADIRENAP"
     gene            complement(2450..2614)
                     /locus_tag="QGG16_05710"
     CDS             complement(2450..2614)
                     /locus_tag="QGG16_05710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24804.1"
                     /translation="MAGKQIEFKENHTHKKSYERGMLILSLACIVFVIIAVNVVSGPT
                     CGEDAWAMSC"
     gene            complement(2616..2834)
                     /locus_tag="QGG16_05715"
     CDS             complement(2616..2834)
                     /locus_tag="QGG16_05715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24805.1"
                     /translation="MDTFPYADWTEALEANGAIFTWADNESAIFVLTGLGIAAFVLSF
                     IHLIRTEDRNLKHAASRLAARDTSMGGE"
     gene            complement(2852..2977)
                     /locus_tag="QGG16_05720"
     CDS             complement(2852..2977)
                     /locus_tag="QGG16_05720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24806.1"
                     /translation="MLELIGAIALMYAVVLTAGIWATRKSRALREAADNDIDSSV"
     gene            complement(2981..4354)
                     /locus_tag="QGG16_05725"
     CDS             complement(2981..4354)
                     /locus_tag="QGG16_05725"
                     /inference="COORDINATES: protein motif:HMM:NF013104.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24807.1"
                     /translation="MGDDLFIENYYFVTVVFMWFLHVGFMCYEAGVSRRKNVMSTAIK
                     NIMTIAVVTPAFYYAGWWTYLCMAEGFIPTVGDAVHGAECTWGNPWGELMGPNIGDHV
                     LAVFWAAFLLFSWTTGSIMSGATIERIRVTAYLILTVFLGSFVWIIGAAWGWSWHGWL
                     VIHFGFHDFAASGVVHGIAGLFALGVLFNLGPRIGAFDDNGGARAFKPHNLHMTLMGL
                     MIIFTAFYAFYAACLAVLPGEAPGWNNIYYNPTTLGAITFTITIAFAGGFMSGYICSK
                     GDPFWTLSGGLAGVIAVSSGADVYAPSLTYLLAMLGAAFAVWIGTWQQEKMRVDDAVG
                     AVAVHGWTGFLGVLLMGVFASGYPAASGAGNQITVTILGQLVGIAALLPLAFLSGYII
                     SWLLKQANLLRVPPEVELEGLDVAEFGGDFYPDFAGTTEVIVEADGTEVPAGPVLAHA
                     ASQIIRG"
     gene            complement(4601..4900)
                     /locus_tag="QGG16_05730"
     CDS             complement(4601..4900)
                     /locus_tag="QGG16_05730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24808.1"
                     /translation="MASKVFIVLFVVVVGGYLGGCLGRTSVSGDEAVRIARAEIDFVP
                     EEINAELGKKGFPPRAVWGVTFWIPAADGEGGFERRTAVEVDAGTGDVIAVHVDY"
     gene            complement(4921..5133)
                     /locus_tag="QGG16_05735"
     CDS             complement(4921..5133)
                     /locus_tag="QGG16_05735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24809.1"
                     /translation="MGVLWLLGAHQSGFLFLLLLAAIGLTFWEARQQGFDRRLTLWWI
                     SVVGMTHVLGYLALRAWVAVNERRER"
     gene            complement(5139..5750)
                     /locus_tag="QGG16_05740"
     CDS             complement(5139..5750)
                     /locus_tag="QGG16_05740"
                     /inference="COORDINATES: protein motif:HMM:NF019498.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HJP24810.1"
                     /translation="MIQKDDEVGHVFSSDDVCRVVGERVRDARRALGLTMAQFAETAE
                     ISLGMVSKIEHGQTSPSLSTLTRLAHASRVPITAFFRGLDEEHDVVIVREGERMEILH
                     EGTREGHVYEDLGSLRGKTRIIEPMMVTLESSDEVFPLFQHEGVEFLHMLEGAMEYGY
                     GPKNYRLAAGDTIQIHGEVAHGPVRLVDLPVRFMSVKVFPAGE"
     gene            5925..7196
                     /locus_tag="QGG16_05745"
     CDS             5925..7196
                     /locus_tag="QGG16_05745"
                     /inference="COORDINATES: protein motif:HMM:NF012296.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HJP24811.1"
                     /translation="MSPTNWSSQPDQPTGSDRTTPPTMYPVGASITLDDLAGDVHPHL
                     ARLRATEPVSWLPALGGWLVTDRTSALEVLRDAATYTVDDPRFSTAQVVGPSMLSTDG
                     DEHARHRTPFAPPFQQAAVREGFEDWTGSTARQLVETLATRPEKRTAPRADLRSELAG
                     PLAVAAIARALGLVDADPDRVLGWYRAIVVGVEGVNAGLEVGDDTRRAVADLRAEVDR
                     TVREAAGSMLAGVAGESSLTADEVFSNTAVLMFGAIETSEGMTANALAHLLTDPDQTD
                     AVRSDRSLVAGAVEESLRMEPAATLVDRYTTVEVVLGDALIPAGDLVTVSLAGANRDP
                     EVFPEPDRYDVRRDNARLQLAFVKGPHVCLGLHLARLQTIAAVDAVLNLLPNVHLDHA
                     SPDGGFEPARGLVFRKPARVPVSWNASGNAR"
     gene            7193..7483
                     /locus_tag="QGG16_05750"
     CDS             7193..7483
                     /locus_tag="QGG16_05750"
                     /inference="COORDINATES: protein motif:HMM:NF014633.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 domain-containing protein"
                     /protein_id="HJP24812.1"
                     /translation="MSPATGEPSEPSCVLEVRVTPKARRTDLRLVDDVIRVRVAEAPE
                     DGKATEAARRSLAAALNLRRPAVALESGGTSRTKRFHVTGLTEDEARSRLAN"
     gene            complement(7496..8467)
                     /locus_tag="QGG16_05755"
     CDS             complement(7496..8467)
                     /locus_tag="QGG16_05755"
                     /inference="COORDINATES: protein motif:HMM:NF025600.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YHYH protein"
                     /protein_id="HJP24813.1"
                     /translation="MATGSEYLGSYTLVDEEFGTMVTVVVDGSVRIIDSNALPDHATG
                     DFPNSGNPNTISEQDASYEFAIEPIYTGTATGVSVTGVAVNGVKFEPGTAETVTCATG
                     ETFRVEAFQDIYNLGFDFNNAHVQPTGEYHYHGVSQLLVEAYEHGDDLVLVGFAADGF
                     LMYYSKAGTYESGYELTTADRTGADCVLSLPPGNAVDIGGTSPDGTYTSDWVYNEGSG
                     GLDSCNGITIGDEYLYVITDDYPYVGRCLNGEVSVGAGRPVGNPGAGVPGDGPGGPPD
                     LTVAAEALGVTVAELQAALGPPPPDIAGAAATLGVDIEALRELIGRP"
     gene            complement(8424..8663)
                     /locus_tag="QGG16_05760"
     CDS             complement(8424..8663)
                     /locus_tag="QGG16_05760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24814.1"
                     /translation="MRWHHDYGSGPGYDGYHHDYGSGPGYDGYHHDYGSGPGYDGYHH
                     DCGSGSGSGLDDYHHRTCGKDHGYRFRVFGFVHPG"
     gene            9028..9324
                     /locus_tag="QGG16_05765"
     CDS             9028..9324
                     /locus_tag="QGG16_05765"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24815.1"
                     /translation="MGADGTWNVTMKTPMGDQAGTLTLATDGGTLTGSMSGPQGSMEI
                     EDGTVDGDTLSWTVNMTSPMPIKVESTATVNGDSITGEAKLGAFGTASFSGTRA"
     gene            complement(9362..10591)
                     /locus_tag="QGG16_05770"
     CDS             complement(9362..10591)
                     /locus_tag="QGG16_05770"
                     /inference="COORDINATES: protein motif:HMM:NF024877.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reductive dehalogenase domain-containing
                     protein"
                     /protein_id="HJP24816.1"
                     /translation="MTGSEVGTADAGSEVPVGLYRGRRPQGPSWEVLDDFERFSQVDD
                     VFNRAFWDPEIATDEARRFFSSYREDLLEWRNAAGFRQRDYAIRNAAWHVVGVFSEMH
                     DGDDLRDGFLSPLSQLRDGPDERFDLGSPVEASATVKQVATVFGADLVGICANDDRWL
                     YSERYARRANEGRPLGLDEDLDNVIVVGQAMDHDLVDTVPSALSGAATGLGYSKDVMV
                     LLATAQWLRNLGYRAVPSLNDTALAIPLAIQAGLGEYGRHGLVITPEFGPRVRFGKIF
                     TDAPLHHDSPSRFGVTEFCESCRRCTEACPPGAITDGSPTSVKLNRSTIGGVRKWTTD
                     GEKCFSYWAQIVSDCMICIRVCPYNKNFSKWHNRLGRRLAATRLRRMMGWLHDRLGYG
                     RRLRPRDWWEGATRRRT"
     gene            complement(10588..12039)
                     /locus_tag="QGG16_05775"
     CDS             complement(10588..12039)
                     /locus_tag="QGG16_05775"
                     /inference="COORDINATES: protein motif:HMM:NF005447.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase"
                     /protein_id="HJP24817.1"
                     /translation="MTIEREISVAADAEAAARFASYDTQDIWQKDKDHFVHPWTDFAT
                     FHEKGSLVVAESEGAYIYDSDGRRYLDGIGGLWCVNTGYGRSEIAQAMADQATKMTYY
                     SSFGHHTTIPVAELSSVLARLAPGPLNHVLYGSGGSMANDTAVRLIHYYFNMLGKPEK
                     KMLITRTNGYHGSTYMAMSLTGVEYDHIGFDVIGEPLIQRVSGPDLYRRPEDTTPEEY
                     GAQLVAEFRAKVESLGPENVAAFFAEPIMGAGGVLMPPPGYLPGMREVCTEYGILYVS
                     DEVVTAFGRLGHMFASEDAFGIVPDIISSAKGLTSAYAPLSATIISDEIYDVISVPQA
                     EGSVFAHGFTYSGHPVCCAAALENIAILEREDICGHVQRVGPYFGEQLATLADLGIVG
                     DVRGSHFMQCVENVANKETKELFDPSVHVGDRVADACEKRGLIVRPIAHLNVMSPPLV
                     LSVEQIDWMVETLREGIIEVQADLIAEGLWSPE"
     gene            12215..13864
                     /locus_tag="QGG16_05780"
     CDS             12215..13864
                     /locus_tag="QGG16_05780"
                     /inference="COORDINATES: protein motif:HMM:NF013206.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase family protein"
                     /protein_id="HJP24818.1"
                     /translation="MSPFATGMVVAAQPEAVEAGVEALRAGGNAVDAAVACALVAGVV
                     DPQMCGIAGFGSAQLFLPAGRPGADSGETIHTCVDFHGTSPAAVRPDMWEHLLVGETR
                     DGFGFILDGNVNDVGYQSITTPGSLLAYYEAQSRYGRLDWADVVAPAIAWAADGFAIR
                     PSVFHWWKEGATLGRADNVGRLAHTPAGRRIYFDENGSLRPIGETLRNPDLARTLTRI
                     AEGGADEFYRGGIAAEIDADMAANGGLLTAADLDEYQTVWGEPLRTTYRGLEVATNQP
                     PGGGVMVAEMLNILGLFDLGAMGHNSVQYVRTVAEAMKWATADKDAHVGDPAFVDVPL
                     DRLLSNDHAAEMAQRIMAGERAHVDRMAGEPPDTTHVCVVDADGNAMSMTHSLGMPSG
                     VVTEGLGFMYNGCMGVFDPRPGRPGSLAPGKRRFTSLCPTLLLDRRLPDDEALRFVVG
                     APGGTQIAMGVLQVILNAVDHDMPVLEAISAPRFSATSDTIDVCNRIPRSVTRELEAD
                     GYEVVRWPGSYEFARVHAIAVGPSGLSGAADPGGDGMALTP"
     gene            complement(13916..14575)
                     /locus_tag="QGG16_05785"
     CDS             complement(13916..14575)
                     /locus_tag="QGG16_05785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24819.1"
                     /translation="MRTRLILLVVACIVAGACSVDVEPELAVPTTTAVPTSTYDVDEA
                     MDGVRENVVRLVMERDGLDREAAEIRADELMERGVDTEVVDQQFSLFANWMDNHQSHP
                     VLGRHWTEDEAECAVVTMLQVEGIGRTGALMNGASVGGMAVEDALSLVQPVGYCTDLL
                     ALMKADMADLGVPQDPDCLLAGLVEEDVAKWFVALFMYGREGFNAAMGEDLDLTCPAG
                     S"
     gene            14651..15532
                     /locus_tag="QGG16_05790"
     CDS             14651..15532
                     /locus_tag="QGG16_05790"
                     /inference="COORDINATES: protein motif:HMM:NF017532.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HJP24820.1"
                     /translation="MSEPSTPVLSAEQVSQYETDGYLYLEDALTPQQVSDLRTVFDNW
                     VEESRSHAGPYGETFDGRPRFDVEPGHTAKSPGLRRVASPIEVSDVYLDAMRSNRALE
                     AVTQLVGANLRFRESKINSKLPGTATHLKYHQDFPFGPLSNDDLITVLFHLDEVGSDN
                     GPLEVVPGSHKGPLLEHWHDGVFTGAVCPDIEAEARKRAVTCHGAVGSAYLMDARVLH
                     GSAPNLSASPRTLFIVQYHAEDAHPLAPNHLPSRFDQEVVAGVATGRVRTSDYEMALP
                     EMPTVASFFAVQAVKSG"
     gene            15525..15995
                     /locus_tag="QGG16_05795"
     CDS             15525..15995
                     /locus_tag="QGG16_05795"
                     /inference="COORDINATES: protein motif:HMM:NF039665.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6130 family protein"
                     /protein_id="HJP24821.1"
                     /translation="MGNSKLLLAVALLAACISSCGGDTADGEMGDHGDHGDHSHDHGS
                     AIDLTDLSVRPEVSLVAEPDGSGGILLDIEVHGLELVPADAGVDHQPGEGHVHVMVDG
                     SSVAMIADTSYHVTGLSNGNHTVMVTLSANDHRDYHVDGKVISDMTSVVVTGGT"
     gene            complement(16194..17066)
                     /locus_tag="QGG16_05800"
     CDS             complement(16194..17066)
                     /locus_tag="QGG16_05800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJP24822.1"
                     /translation="MPKAEVNGIAIEYDVQGDGEPLLLVMGLGGQLTDWRDEFVGLFV
                     DRGFKVIRYDNRDSGLSSQGTWKPPSQSTITRALLTRQPVKGVAYSMVDMADDAAGLL
                     DFLEIDSAHVVGLSMGGMIVQEIALNHPDRVRTMCSIMSNTGDRRNGGIAASLIPKFA
                     WRQKPSLENAVEDNVEVFRLISGPHFDADEYREHVRLNMDRSFQPEGLERQMAAISST
                     RDRTKLLEAVTAPTLVIHGLVDPLVKPSGGLTTAKAVPGSRFLGIPDMGHDLPEQRWP
                     EICDAIIENCRRAN"
     gene            complement(17101..17970)
                     /locus_tag="QGG16_05805"
     CDS             complement(17101..17970)
                     /locus_tag="QGG16_05805"
                     /inference="COORDINATES: protein motif:HMM:NF012472.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HJP24823.1"
                     /translation="MPDPDRLLDEVHASGVGAFDSGLVYADEGGTCDGRLGAWVASRG
                     VRESITLIGKGCHPGPPDWTASRVSPETVAVDIAATLDRMGTDRLDLWLFHRDDDTVP
                     VGELVDAAQREVALGTIGAWGVSNWSAERFWEARSRADVALPVATSPQFSLVDQLAKP
                     WPGVTTITGPANAEERVRLADSEISVITWSPLAGGFLTAARRPESATDAETTRCYDSV
                     QNRDRRDRTLQLATSRGCSPEQVAIAYVATSPFRAHVVCAARNGLEAAANLQAAKIEL
                     TSEERQWLEDGDR"
     gene            complement(18035..18859)
                     /locus_tag="QGG16_05810"
     CDS             complement(18035..18859)
                     /locus_tag="QGG16_05810"
                     /inference="COORDINATES: protein motif:HMM:NF014893.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HJP24824.1"
                     /translation="MGDLVGEVDAVYVATPHSSHRDVSVTLLDAGVPVLCEKPMAVNA
                     AQVRQMIEISQLSGTFLMEAMWTRHLPVMAACRKWIEEGRLGEIQMVEANFGFNAPYD
                     PNSRLWAPESAGGSLLDVGIYTLTLAELVFQSPPLSFDAEAELSADGVDVRLSVTAEY
                     PTGGLAKLNSAINTDLGVDGRIVGSKGHVDIPRFWRAEQMTLTTLEGEKVDEVHVAHR
                     VNGFEYQITEVARCLEAGMMESPIVPGSWSLAMAVLMDEIRSRIGVVYPCDAEVLS"
BASE COUNT         3698 a         6222 c         5724 g         3259 t
ORIGIN      
        1 gcggactgtg gctccggaag caggcccagg aaatgggcct ccacgcctgg gtacgcgact
       61 ccaccgacca actgcacaac gtgcaggtcc aaggaccact cagtcgagag atcctctcag
      121 aggtgatctg gacccgaccg gaccaggctt cgatcgacga gttgggctgg ttccgcctct
      181 cagtggcccg catcggcgac gaacacggca taccgatcgt ggtttcccgt accggctaca
      241 ccggtgagtt gggattcgag gtgttctgcc acccatcgga cgctccggag gtgtgggacg
      301 cgatctgggc cgtcggccgc ccaaagggcc tcacaccctt gggcctcgag gcactcgaca
      361 tgctccgcat cgaggccggc ctgatctttg ctggctccga gttcaacgac cagaccactc
      421 cgctggaggc aggtatcggc tttaccgtgc ctatcaagac caaagaggac gacttcatcg
      481 gtcgtgacgc gctggttcgc ggcaaggaac acccccagcg caccttggtc ggattggaac
      541 tctcagggga cgagccagcc ggccccggta acccgatcat gatcgcccgc cagcaggtgg
      601 gtacgatcac cagcggaacc cgttcaccca tcctggggaa gaacatcgct ctcggctgga
      661 tggccgtcga acacgctgag attggtaccg aggtcgaggt ggggcagatg gatggccacc
      721 agaagcgcct cccggccacc gtggtgcgct tcccgcacta tgaccccgat aaggaacgcg
      781 tgcggagtta gtccaggaat cggacccgga acagttcccg gtcgacttcg gtcggccagt
      841 cccgaccaag gatcagccct gccgccagtt ccccgagcgc cggagcacac ttcgccgcga
      901 acccgttccc gccgattgcg cagtaggtcc ggcccttgac ctggtcgccc agcagatcga
      961 tgaacggaaa gccactaggc gtgtaggtgg tgacgcacga cgtggtcctg cgccccatgt
     1021 cacggagccc gggaagcaac cctcccaaga tccgctcaag cctcaaagcc actacagggt
     1081 caccgtcggt ccggaaccag gcaaccaact cggctgccgt agcccgcaca tggtcgtcct
     1141 ctggtacccc caccttgagg atgtgacggt cctccgaacc aggagggtgt ccgacaagat
     1201 ggtcacgcac gggaggcgtc aggtagaagt cgtcgactgg gtcggggaac ttaccgatga
     1261 tgctgggcat gccggccaac ctgtcgacct cggcagcatc caggtggaca agcaactggg
     1321 tgtgtaacgc gtactccagg tccaagccgg ccgctgggga cttgccgtac ccggagaatg
     1381 caccggtagc cagcagcacg cggtcggcgg cgatgacgcc catgtcggtg gacaccgaga
     1441 ccgggccgac cgctccctcg aggaccgagt caacaagggc gaccacttgg gtggccccgg
     1501 cagccaccgc ggcggcggtc tcggaggcta cgtgggcccg ggggtccaca ctgcccgccg
     1561 gtggtggctc ccacagggtc tcgcactcat cagggagcga gagaaactcc atgctctcaa
     1621 ttgcttcggc tgcaccacgt cgttggcaac acagcccata ccggacgtcg gcttcggcca
     1681 gcaggtcgat accggcaggc gagtccaccc agaggtggcc cacagggttg acggggtcga
     1741 tgccggtacg ggctgccact tccgtgaact ggctgaccga ccgatagccc agccacgccc
     1801 ggaccggatc cggatcgata atgcgactca cccgggcgac gtcatggtga ctgccgaaga
     1861 cgcccccatg ggtctgtcga tcggtcggtt cggcctgacc gacgagcacc acgtcgcagc
     1921 cggcgtcggc taggtgtctg gccgccgatg cacccagcat gccggcacca accaccgcca
     1981 cctcacagcg acgctccccc gtcaccggct ctccatcatc ggcccatcgt cgctcatgag
     2041 aacctccgac gccaacaaag ccacctatct acggggcatt ctcccggatg tcggccagca
     2101 ggttccagac cagaaggccg acggccacag aggccgccaa cgcgccaagc agcgggccga
     2161 ggctctggag gcctacgtca tcctcaaacc actggcgcca gaggacagcg gcggagaatc
     2221 cggcggcaaa ccacgccaaa cggctaccaa gccggatcat cacgatcgtc accactgcgg
     2281 tgaggacgat cacctgaccg tcgccgacct gaacgcccct cagcgtgcgg tcgtcctcga
     2341 cggtccaggg caggaacgac gaaatgacga cgacggcggc ggccacctcc gcaactcgga
     2401 ggcgcaccgc cgccgtcatt cgactgcttc gcctactgct cgtcagggac tagcaggaca
     2461 tcgcccatgc atcttcaccg cacgtggggc cactgacgac gttcacagcg atgatgacga
     2521 acacgatgca cgcgagcgac aggatcaaca tcccacgctc gtaggacttc ttgtgcgtgt
     2581 ggttctcctt gaactcaatc tgctttccag ccatctcact cacctcccat cgatgtgtcc
     2641 cgggccgcca gtcggctggc cgcatgcttg aggttcctgt cctcggtcct gatcaggtgg
     2701 atgaagctca acacgaaggc tgcgatgccc agaccagtga gcacaaagat tgcactctca
     2761 ttgtcggccc aggtgaagat cgcaccattc gcttctagcg cctccgtcca atcggcgtag
     2821 ggaaaggtat ccatatcgat tcacactcct ttcaaactga actgtcgatg tcgttgtctg
     2881 ccgcctcacg cagggcccgc gacttgcgcg ttgcccaaat gcccgccgtc agcacgacgg
     2941 cgtacatcag cgcaatggcc ccgatgagtt ccagcatcaa tcaacctcgg atgatctgac
     3001 tggcggcatg agcaagtacc ggtccggctg gtacctcagt gccatcggct tccacgatga
     3061 cctcggtggt gccagcgaag tccgggtaga agtccccacc gaactcggcg acgtcgagac
     3121 cctccaactc cacctcgggc ggcacccgaa gcaggttcgc ctgcttcagc agccacgaga
     3181 tgatgtaacc ggagaggaac gccagcggaa ggagggcggc tatgccgacc agctggccca
     3241 ggatggtcac ggtgatctgg ttcccagcgc ccgatgcggc cgggtagccg ctggcaaaga
     3301 cgcccatgag caggacaccc aggaagcccg tccaaccgtg gacggcgacc gccccgacgg
     3361 cgtcgtcgac ccgcatcttc tcctgctgcc aggtaccgat ccacacggcg aacgccgcgc
     3421 ccagcattgc cagcaggtag gtcagcgagg gcgcgtagac gtccgcaccg gacgacacgg
     3481 cgatcacgcc agccaggcca ccggacaggg tccagaacgg atcacccttc gagcagatgt
     3541 aaccgctcat gaagccacca gcgaacgcga tcgtgatcgt gaacgtgatg gcacccagcg
     3601 tggtcgggtt gtaatagatg ttgttccaac ccggagcctc acccggcaac accgccaggc
     3661 aagccgcgta gaaggcatag aaggcggtga agatgatcat gaggcccatg agggtcatgt
     3721 ggaggttgtg aggcttgaat gccctggcac ccccgttgtc atcgaacgca ccgatccgcg
     3781 gtcccagatt gaacaacacc ccgagggcga agagcccggc aatgccgtgc accactcccg
     3841 aggctgcgaa gtcgtggaac ccgaagtgga tgaccagcca gccgtgccag ctccagcccc
     3901 aggcagcgcc gatgatccac acgaatgaac cgaggaacac ggtgagtatc aggtaggcgg
     3961 tgacccgaat gcgctcgatg gtcgctcccg acatgatcga gccggtggtc caggagaaca
     4021 acaggaacgc cgcccagaag acggccagca cgtggtctcc gatgttcggg cccattagct
     4081 cgccccacgg gttgccccag gtgcactctg cgccgtggac ggcatcgccg accgtcggga
     4141 tgaagccttc ggccatgcac aggtaggtcc accacccggc gtagtagaag gccggcgtaa
     4201 ccacggcgat ggtcatgatg ttcttgatcg ccgtcgacat gacgttcttt cggcgactta
     4261 ccccggcctc gtaacacatg aagccgacgt gcaggaacca catgaagacc acggtgacga
     4321 agtaatagtt ctcgatgaag aggtcatcac ccatcattgg atcctcacct ccccacccgg
     4381 actgcgtact gacatggaca ttcgtcctcc ccttagctac tggcgcgcct tacggcacgg
     4441 gtctgaaatt gggtcgatgc cggtcccaac tcgcccaccc gggagctgtc attcacatct
     4501 accactggta tgacgagggt cacagtaaca gtaggtaacg atccgtgctg ggaaaagatt
     4561 ctcctcagag gaaagtgaaa gtagaaggag ttccggcgtg tcagtagtcg acgtggaccg
     4621 ctatgacgtc gccggtgcca gcgtccacct cgaccgctgt cctccgttcg aacccgccct
     4681 cgccgtcagc agccgggatc cagaacgtga ccccccaaac ggcccgtggc ggaaagccct
     4741 ttttgccaag ttcggcattg atctcctcgg gtacgaagtc gatctcggca cgagcgatac
     4801 gaaccgcttc gtcccctgat acggaagttc gaccgaggca cccgcccagg tagccgccca
     4861 ccacgaccac gaacaagacg atgaatacct ttgacgccat cgaccactgc ctaatggggg
     4921 tcaccgttct ctccgttcgt tgactgcaac ccaggcccta agagccaggt agccgagaac
     4981 atgggtcata ccgaccaccg agatccacca aagggttaag cgtcggtcaa agccctgctg
     5041 acgcgcttcc cagaacgtca gcccgatggc agccagcagc agcagaaaga ggaagccgct
     5101 ctgatgggcc ccgaggagcc agagaactcc cacgactact actcccccgc cgggaagacc
     5161 ttgaccgaca tgaaccggac cgggagatcc accagtctca ccggtccgtg ggccacctcg
     5221 ccgtggatct ggatggtgtc gccggctgca aggcgataat tcttgggccc atagccgtat
     5281 tccatggctc cctccagcat gtgaagaaat tccacgcctt cgtgctgaaa tagtgggaac
     5341 acctcgtcgc tggactccag tgtgaccatc atcggctcga tgattcgagt cttgcctcgc
     5401 agcgatccga ggtcctcgta tacgtggccc tcgcgagttc cctcgtggag gatctccatg
     5461 cgttcgcctt cccgcacgat caccacatca tgctcctcgt cgagtccacg gaagaaggcc
     5521 gtaatgggca cacgggaggc atgggccagt cgcgtcaggg tcgacaaact gggagaggtc
     5581 tgcccatgtt cgatcttgga caccatgccc agggagatct cagccgtttc ggcgaactgg
     5641 gccatggtca agccgagcgc acgtcgagcg tctcgcacac gctcccccac gacccggcac
     5701 acgtcgtcag acgaaaatac atgcccaacc tcatcatcct tctggatcat cgttgtgagc
     5761 ctttcgtccg gaccgctgcc taatcccgat gctaatgaga acccttcacg gtagtggtaa
     5821 aacccacgcg agtagaaggc tggcagccag acttcccagc cggtcgaggc ggcagacaac
     5881 acgaccgcta tcttggccgg tgcagccgtc ctacgctccg gaacgtgtct ccaaccaact
     5941 ggtccagcca gcctgaccag cccacggggt ccgacaggac tacgccgccc accatgtatc
     6001 cggtcggggc atcaatcacg ctggacgacc tggcgggcga cgtgcacccc cacctggccc
     6061 gactgcgtgc caccgaaccc gtgtcgtggc ttccggccct tggaggttgg ctggtcaccg
     6121 accgaacctc agcactcgag gtgctgagag acgcagccac ctacaccgtc gacgacccac
     6181 ggttctcgac ggcccaggtg gtcggaccgt cgatgctctc caccgacggc gacgagcacg
     6241 ctcgccaccg gacaccgttc gccccgccgt tccaacaggc cgccgtgcga gaaggcttcg
     6301 aggattggac cggatcgaca gcccggcagc tggtagagac actggccaca aggcccgaga
     6361 agcgaactgc tccacgggcc gacctccgga gcgaattggc cggaccgctg gctgtagctg
     6421 ccatcgcccg ggcgctcgga ctggtcgacg ccgatcccga ccgggtgctg ggctggtacc
     6481 gggccatcgt ggtcggcgtt gaaggggtga acgccgggct tgaggtggga gacgacaccc
     6541 ggcgggcggt ggccgacctg agggccgagg tggaccggac cgtgcgagag gccgccggat
     6601 cgatgctggc cggagtggcc ggagaaagtt cactgaccgc cgacgaagtc ttctccaaca
     6661 ctgcggtgct catgttcgga gccatcgaga cctcggaggg gatgacagcc aacgcgctgg
     6721 cccacctgct gaccgacccc gaccagaccg atgccgtacg cagtgaccgg tccctggttg
     6781 ccggtgctgt ggaggagtcg ctgcgtatgg agcccgctgc gacactcgtg gaccgctaca
     6841 ccaccgtcga ggtggttctc ggagacgcac tcataccggc cggcgaccta gtgacggttt
     6901 cgttggccgg cgccaaccgc gacccggaag tgttccccga gcccgaccgt tatgacgtgc
     6961 gccgggacaa cgcccggctc cagctggctt tcgtgaaggg accgcacgtg tgcctgggcc
     7021 tgcatctagc ccgcctgcag acgatcgccg cggtggatgc cgtactcaac ctgctcccca
     7081 acgtgcacct cgaccatgcg tcaccagacg ggggcttcga gcctgctcgg ggcctggtgt
     7141 tccgcaaacc ggcacgggtt cccgtgagct ggaacgcctc gggtaatgcc cgatgagccc
     7201 agcaaccggc gaaccatccg agccctcgtg cgtgctggaa gtgcgggtga caccaaaggc
     7261 ccgccgcacc gacttgcgtc tggtggacga cgtgatccgc gtccgggtgg ccgaagcccc
     7321 cgaagacggt aaggcaaccg aagccgcccg ccgctcccta gccgcggctc taaacctccg
     7381 tcgaccagca gtcgccctcg aatcaggcgg cacctcgcgc acaaagcgct ttcacgtcac
     7441 cggactcact gaagacgagg cacgctcccg gctagccaac tgaccggttg acgaatcagg
     7501 gacgtccaat gagttcccgc agggcttcga tatctacgcc caaagtggct gctgctccgg
     7561 caatatcggg cggtggaggc cctagagcgg cttggagttc ggcaacggtc acgccgagag
     7621 cctctgccgc caccgtcaag tcgggtgggc caccggggcc atcaccagga acacctgcgc
     7681 cgggattacc gaccggtcta cctgcaccga cactcacctc accgttcagg cagcgaccta
     7741 cgtacgggta gtcatcggtg atgacgtaca agtactcgtc accgatcgtg atgccgttgc
     7801 aactatcgag cccaccactt ccctcgttgt agacccagtc agaggtatag gtgccgtcag
     7861 ggcttgttcc gccgatatcg accgcgttcc cggggggaag gctgagtacg caatccgcgc
     7921 cagtgcgatc tgccgttgtc aactcatagc cggactcata agtaccggct tttgagtagt
     7981 acatcaaaaa gccgtcagca gcgaaaccca caagaacgag atcgtcgccg tgctcatagg
     8041 cctccaccag gagctgagag acaccgtgat agtggtactc gcctgtcggt tgaacgtgag
     8101 cattgttgaa atcaaacccg aggttgtaga tgtcctgaaa cgcctcaacc cggaaggtct
     8161 caccggttgc acacgtaaca gtctccgcag tgccaggctc aaacttcacc ccattgaccg
     8221 caacacctgt gacgctgaca ccggtagcag tacccgtgta gatcggttcg atagcgaact
     8281 cgtaactggc gtcctgctca gaaatggtgt tgggattccc actattggga aagtcgccag
     8341 tcgcatgatc gggcagcgca ttgctgtcga tgattcgaac cgaaccgtcg acgaccactg
     8401 tcaccatcgt gccgaactct tcgtcaacca gggtgtacga acccaaatac tcggaaccgg
     8461 tagccatggt cttttccgca ggtgcggtgg tggtagtcgt caaggccgga gcctgaacct
     8521 gaaccgcagt cgtggtggta gccgtcgtag ccggggcctg agccgtagtc gtggtggtag
     8581 ccgtcgtagc cggggcctga gccgtagtcg tggtgatagc cgtcgtagcc ggggcctgag
     8641 ccgtagtcgt gatgccaccg cacgcggtag ccagcagaag cacaaccagg acaacaaagc
     8701 gcttcgctgt catatttctc tcacttcatc ctcttccgca cagggattcc gagttgagat
     8761 tcctcggctt accggcacag gaactaacaa cgggcatcca cttcatacag tcttggctga
     8821 ccgtccaaac gaggcgcaac tgctgaactg gtccagacca tctgagctaa ttctgaaatt
     8881 ggtccgaact accgttatcc aactgggttt cgttccaact cccacaccgc ttaaggccgg
     8941 gccgcccgaa tcatggacgg acggtcacag gctctacggt gactgtatgg cccaggccga
     9001 gcggcgggcc ggaaatggag caagacgatg ggcgccgacg gcacctggaa cgtaaccatg
     9061 aagaccccta tgggcgatca ggcgggaacg ctgactctcg ccactgatgg cggcactctc
     9121 accggctcga tgtctgggcc acagggttcg atggagatcg aagacggcac ggtcgacggc
     9181 gacaccttgt cgtggacggt gaacatgacg tcgcccatgc ccatcaaggt cgagtccaca
     9241 gccacggtca atggcgactc gatcaccggg gaggccaagc taggagcgtt cggcaccgcc
     9301 tcattcagcg gtacccgcgc ctgacccggc aagtaacccc caccaacggg acgactgacc
     9361 atcaggtccg tcgtcgggtg gccccctccc accagtcgcg cggtcgaagt ctcctgccat
     9421 aacccaggcg atcgtgtaac caacccatca tccggcgtag tcgagtggcg gccaaccgcc
     9481 gacccagacg gttatgccac tttgagaagt tcttgttgta cgggcagacc cgaatgcaga
     9541 tcatgcagtc gctgacgatc tgggcccagt acgaaaagca cttctctccg tcggtcgtcc
     9601 actttcgaac accgccgatc gtcgaccggt tcaacttcac cgatgtcggc gacccgtcgg
     9661 tgattgctcc cggcggacac gcctcggtgc aacggcgaca tgattcgcag aactccgtca
     9721 ccccaaaccg ggacggtgag tcgtggtgta gcggggcatc ggtgaagatc tttccgaagc
     9781 gaacccgtgg accgaactcg ggagtgatca ccagtccgtg acgtccgtac tcgccaagcc
     9841 cagcttggat tgcgagcggt atggccagag cggtgtcgtt gaggctcggc actgcccggt
     9901 agccgaggtt tcgaagccac tgcgcagttg ccaagaggac catcacgtcc ttggagtacc
     9961 caagtccggt ggccgctccg gacaaggccg acggcacggt gtcgaccaga tcgtggtcca
    10021 tggcctgacc caccacgatg acattgtcca ggtcctcgtc cagacccaac ggtcgaccct
    10081 cgttggcacg gcgggcgtac cgctcgctgt atagccaccg gtcgtcgttg gcacagatcc
    10141 caaccagatc ggccccgaac acggtggcca cctgtttcac ggtggctgac gcctcaaccg
    10201 gtgaccccag atcgaagcgt tcgtcaggcc cgtcgcgtag ttgactcaac ggacttagga
    10261 agccgtcacg caggtcatcg ccgtcgtgca tctcggagaa caccccgact acgtgccaag
    10321 cggcgttgcg gatcgcatag tcgcgttgcc tgaagccggc agcgttgcgc cactcaagga
    10381 ggtcctcccg atatgaactg aagaaccgac gggcctcgtc ggtggcgatc tccgggtccc
    10441 agaaagcccg gttgaacacg tcatcgacct ggctgaaccg ttcgaagtcg tccagcacct
    10501 cccaggatgg cccctgaggc cgacgccccc ggtaaaggcc tactgggacc tcgcttcctg
    10561 cgtcggcggt gccgacttcg gacccggtca ctccggcgac cagagcccct cggcaatcag
    10621 gtcggcctgg acctcaatga tgccctcgcg cagagtttcg accatccagt cgatctgctc
    10681 gacggacagc accaacgggg gcgacatcac gttcaggtgg gcaatgggtc ggacgattag
    10741 ccctcgcttc tcacaggcgt cggccacccg gtcgcccacg tggaccgacg ggtcgaagag
    10801 ttcctttgtc tccttgttgg ccacgttctc tacgcactgc atgaagtggc tgccccggac
    10861 gtcgccgacg atccccaggt ccgccagcgt cgccagttgc tcaccgaagt acgggccgac
    10921 ccgctggacg tgcccgcaaa tgtcctcgcg ttcgaggatg gcgatgttct cgagtgcagc
    10981 ggcgcagcac accgggtgac ccgagtaggt gaacccgtgg gcgaagaccg acccctcggc
    11041 ctgtggaacg ctgatcacgt cgtagatctc gtcggagatg atggtggccg acagcggggc
    11101 gtacgccgag gtcaggccct tggccgacga gatgatgtcg ggcacgatcc cgaaggcgtc
    11161 ttcgctggcg aacatgtggc cgaggcgtcc gaaggcggtg accacctcgt cggatacgta
    11221 gaggatcccg tactcggtgc agacctcgcg catgcccggt aggtagccgg ggggcggcat
    11281 gagcacgccg ccggcaccca tgatcggttc ggcgaagaag gcggccacgt tctctgggcc
    11341 aagactctcg accttggccc gaaactcggc aaccagttgt gccccgtact cctccggtgt
    11401 ggtgtcctcg ggtcgtcggt acaggtcggg ccccgatacc cgctggatga gcggctcgcc
    11461 gatgacgtcg aaaccaatgt ggtcgtactc cacgccggtc aacgacatgg ccatgtaggt
    11521 ggacccgtgg tacccgttgg tgcgggtgat caacattttc ttctcgggct tgccgagcat
    11581 gttgaagtag tagtggatga gtcgcaccgc ggtgtcgttg gccatcgacc cgccggagcc
    11641 gtacagcacg tggttcaacg gccccggggc aaggcgggcc agcactgacg acaactcggc
    11701 cacaggaatg gtcgtgtggt gtccgaacga cgagtagtag gtcattttcg tggcctggtc
    11761 ggccatggcc tgggcaatct cgcttcggcc gtatccggtg ttcacgcacc agagtccacc
    11821 aatgccgtcg aggtagcggc ggccgtcgct gtcatagatg taggcgccct cggactctgc
    11881 gacaacgagt gatccctttt cgtgaaaagt ggcgaagtcg gtccacgggt ggacgaagtg
    11941 gtccttgtcc ttctgccaga tgtcctgggt gtcgtaggag gcgaaccgag cggccgcctc
    12001 ggcatcggcg gctactgaga tctcacgttc gatagtcatg gcgttccctc ctggaatagg
    12061 ccgcagccca cgagcatcac cgacgactgt cccgatgcct aatccggccc ctctggtacc
    12121 tcccacagcc tgccatgtgg accactgggc acttctaccc aaccggccca tgcaaggatc
    12181 aagcatcctt gaccacctac gaggggacat gaggatgagc ccattcgcga ccgggatggt
    12241 ggtggccgct caacccgagg cggtggaggc cggtgtcgaa gcgctacggg ccggtggcaa
    12301 cgctgtggat gccgcggtgg cctgcgccct tgtggccggc gtggtcgatc cccagatgtg
    12361 cggcatagcc ggattcggga gcgcccagtt gttcttgccc gccggccgcc caggcgccga
    12421 ttctggtgag accatccaca cctgtgtcga cttccatggc acgtcgccgg ccgccgtgcg
    12481 ccccgacatg tgggagcacc tgctggtcgg cgaaacccga gacgggttcg gcttcatcct
    12541 cgacggcaac gtcaacgacg ttggctacca gtcgatcacc acgcccggct cgctactggc
    12601 ctactacgaa gcacagagcc gctacggccg tctcgactgg gctgacgtag tagctccggc
    12661 cattgcctgg gcagccgacg gctttgcgat ccggccgtcg gtgttccact ggtggaagga
    12721 gggcgccacg ctcggccgag ccgacaacgt cgggcgtctg gcccacaccc cggccgggcg
    12781 ccgcatctac ttcgacgaga acgggtcgct tcgacccatc ggtgagacgc tccgaaaccc
    12841 cgatctggcc aggactctga cccgcatcgc cgaaggtgga gcggacgagt tctaccgggg
    12901 tgggatcgca gcggagatcg atgccgacat ggcggccaac ggcggtctac tgacggccgc
    12961 cgacctcgac gagtaccaga ccgtctgggg cgagccgctg cgcacgacct accggggact
    13021 ggaggtggcc acgaatcagc cgcctggcgg tggagtcatg gtggccgaaa tgctcaacat
    13081 cctcggcctc ttcgacctgg gggccatggg gcacaacagc gtccaatacg tccggacggt
    13141 ggctgaggcc atgaagtggg ccacagccga caaggacgcc cacgtcggag acccagcctt
    13201 cgtcgacgtg ccactggacc ggctcttgtc gaacgaccac gccgccgaga tggcccagcg
    13261 catcatggcc ggcgaacgtg cccacgtgga tcgcatggct ggtgagccac ccgacaccac
    13321 ccacgtctgc gtggtcgacg ccgacggcaa cgccatgtcg atgacccact cgctgggtat
    13381 gccgtccggc gtcgtcaccg agggcctggg cttcatgtac aacggctgca tgggggtgtt
    13441 cgacccccgt ccgggacgac ccggttcgct ggcccccggc aagcgccgct ttacctcgct
    13501 ctgcccgacc ctccttctgg accgaagact cccagacgac gaagcgctgc ggttcgtagt
    13561 cggcgctcca gggggtaccc agatcgccat gggcgtactg caggtgatcc tcaacgccgt
    13621 cgaccacgac atgccggtgc tggaggcgat ctcggccccc cggttctcgg ccacgagcga
    13681 caccatcgac gtctgcaacc gaatcccccg atcggtgacc cgagagctgg aggccgacgg
    13741 ctacgaggtg gtccggtggc ccggcagcta cgagttcgcc agggtgcacg ccatcgccgt
    13801 gggacccagt gggttgtccg gagccgccga tccgggcggc gacggaatgg cgctcactcc
    13861 ctgacgacca ccctcgtaac gacggtggta gccagtcggc ccggagacga ggcggtcagg
    13921 aacccgccgg gcaggtcagg tcgaggtcct cgcccatcgc agcattgaac ccctcacggc
    13981 cgtacatgaa gagggcgacg aaccacttgg cgacgtcctc ctctaccaag ccggccagca
    14041 agcaatcggg gtcctgtggg acgccgaggt cggccatgtc agccttcatc aatgccagaa
    14101 ggtcggtgca ataacccacg ggttgtacca gggacagagc gtcctcgacg gccatgccgc
    14161 ccactgaggc gccgttcatg agcgcaccgg tccggccgat cccctctacc tggagcatgg
    14221 tgaccacggc acactcggct tcgtcctcgg tccagtgtcg acccagaacg ggatgcgact
    14281 gatgattgtc catccagttg gcaaagaggg agaactgctg gtcgacaacc tcggtgtcca
    14341 cgccgcgctc catgagttcg tcggcacgaa tctcagcagc ctcccgatcc aggccatcac
    14401 gctccatgac cagacgcacg acattctcgc gaacaccatc catcgcctcg tcgacgtcgt
    14461 aggtgctggt cggcacagca gtggttgtcg gtacagccag ctcgggctcg acgtcgacag
    14521 aacacgctcc cgcaacgatg caggccacga ccaacaggat cagacgagtg cgcatccggc
    14581 agtctcacac cggatcagtc cgaccaaaac tcggctcggg actcgtccgg accattacgc
    14641 tccgctgctg atgtccgaac cctcgacgcc ggtgctctcc gctgagcagg tcagccagta
    14701 cgagaccgac ggatacctgt acctagagga cgcgctcacc ccgcagcagg tgtccgacct
    14761 gcgaacggtg ttcgacaatt gggtcgagga aagccgctcc catgcggggc cgtacggcga
    14821 aaccttcgat gggcgccccc gattcgacgt cgagcccggc cataccgcga aaagcccggg
    14881 ccttcgccgc gtcgcctcgc ccatcgaggt gtccgacgtc tacctcgacg cgatgcgctc
    14941 caaccgggcc ctggaagccg tgacccagtt ggtcggtgcc aatctgcggt tccgtgagtc
    15001 caagatcaac tcaaaactgc ctggaacggc cacccacctg aagtaccacc aggactttcc
    15061 gttcggcccg ctcagcaacg acgacctgat caccgtgctg ttccacctcg acgaggtcgg
    15121 ctccgacaac ggcccactgg aggttgtgcc gggtagccac aaggggccgc tgcttgagca
    15181 ctggcacgac ggggtgttca ccggcgcggt gtgccccgac atcgaggccg aggctcggaa
    15241 gcgagccgtt acctgccatg gggccgtcgg ctcggcgtat ctcatggacg cccgggtgtt
    15301 gcacggctcg gccccaaatc tgtccgcgtc accccgaacg ctgttcattg tccagtacca
    15361 cgccgaggac gcccacccgt tggcccccaa ccacctgccc agccgctttg accaggaggt
    15421 ggtggctggc gtggccaccg gacgagtacg cacctcggac tatgaaatgg cactacccga
    15481 gatgcccacc gtggcctcct tcttcgccgt ccaggcggtg aaaagtgggt aactcgaaac
    15541 tgctactggc cgtagccctc cttgcggcgt gtatttcctc ctgcggggga gacacggcag
    15601 atggggaaat gggcgaccac ggcgaccacg gcgaccacag ccatgaccac ggctcggcca
    15661 tcgacctcac cgacctctcg gttcgacctg aggtatctct cgtcgccgag cccgacggat
    15721 caggcgggat cttgttggac atcgaagtcc atggtctgga gttggtgcca gccgatgcag
    15781 gagtcgacca ccaacccgga gagggacacg tgcatgtgat ggtcgacggc tcgtccgtgg
    15841 cgatgatcgc cgataccagt taccacgtca cgggcctaag caacggtaac cacacggtca
    15901 tggtcacgct ttcggcaaac gaccacaggg actaccacgt tgatgggaag gtcatcagcg
    15961 acatgacctc cgtggtggtc accggaggca catgaccgcc taggaccagg gcgacagcga
    16021 ggccatcgtc tccctgggag atggcgttga ccaaaccacc cccgtgggcc tgcgctcacc
    16081 tctgtagcag gcagcgactt cttccatccc cgcccagtcc gggcactcaa ggcctcgccg
    16141 ctaggagaga ccgggaagac accgatctcg cctggaccgg ttaaccaatg gcactagttg
    16201 gcgcgtcgac agttctcgat aatggcgtcg catatctccg gccaacgctg ctctggtagg
    16261 tcgtgtccca tgtcgggtat gcctaggaac cgcgatcccg gcaccgcctt ggctgtcgtc
    16321 agaccaccac tgggcttgac cagtggatcg accagtccgt ggatgaccaa ggtcggggcc
    16381 gtaactgctt caagcaattt cgttcgatca cgggtgctgg agatggcggc catttgccgc
    16441 tccaacccct ccggttggaa acttctatcc atattgagtc gaacatgctc ccggtactcg
    16501 tcagcatcga aatggggccc ggaaatcagg cggaagacct cgacattgtc ttccacggcg
    16561 ttttccagcg agggtttttg ccgccacgcg aacttgggaa tcagcgaggc cgcaataccc
    16621 ccatttcggc ggtcaccagt gttcgacatg atggagcaca tggtccggac gcgatcagga
    16681 tggttgagcg caatctcctg gacgatcatc ccgcccatcg agaggccgac gacgtgagcc
    16741 gaatcgatct cgaggaagtc gagtagaccg gcggcatcgt ccgccatgtc gaccatggaa
    16801 taggccactc ccttcaccgg ttgcctggtg aggagagcgc gagtaatggt cgattggctg
    16861 ggtggcttcc aggtcccctg tgaagacaac ccgctatcac ggttgtcgta gcggatgacc
    16921 ttgaagcccc gatcgacgaa caggccaacg aactcatctc gccagtccgt caactggccc
    16981 ccaagtccca tgaccaagag caatggctcg ccatcgcctt ggacgtcgta ttcgatagca
    17041 atcccgttga cttcggcctt gggcatcccc ggaccgtagt tctggtggac gatttcccgg
    17101 ctaccggtcc ccatcttcga gccactggcg ctcttcgctg gtgagttcta tcttcgctgc
    17161 ctgaagattc gcggcggcct ccaggccatt gcgtgcagcg cagacgacat gggcgcggaa
    17221 aggcgaagtc gcaacgtaag caatggcgac ctgctctgga ctgcatcccc gcgaggtcgc
    17281 tagttgcagc gtccggtccc ttcgatcccg gttctgcacc gagtcatagc agcgggtcgt
    17341 ttccgcatca gtggccgact ccggtctccg tgctgcggta aggaaaccgc cagccaaggg
    17401 cgaccaggtg atgaccgaga tctcggaatc ggcaaggcga acccgttctt cagcattggc
    17461 tggccccgtg atagtggtga cccctggcca aggctttgca agttgatcaa ccagcgagaa
    17521 ctgcgggctg gtggctaccg gcagagcgac gtctgcccta cttcgagcct cccagaatcg
    17581 ttcggctgac cagttggaca ctccccaggc tccaatggtg cccagggcca cctcgcgctg
    17641 ggcagcatct accaactcgc cgacaggcac ggtgtcatcg tccctgtgga acaaccagag
    17701 gtcgagcctg tcggtaccca tccggtcgag ggtcgctgcg atatcgacgg ccactgtctc
    17761 gggcgagact ctggacgccg tccagtcggg tggcccggga tgacatccct tcccgataag
    17821 cgtgatcgat tcgcggacac ctcggctggc tacccaggcg ccgaggcgtc catcacacgt
    17881 accgccttcg tctgcgtaga cgagacccga atcgaaggca ccgaccccgg aggcgtggac
    17941 ctcatcgaga agtcggtctg ggtctggcac caaggttgct ccgaataggg gcgttgcccc
    18001 ctgaatcaca gtcggcagca tttaaataga ccgttcacga gagaacctct gcgtcgcatg
    18061 ggtagacgac tccgattcga gaccggatct cgtccatcag gaccgccatg gccaatgacc
    18121 acgacccggg gactattgga ctctccatca tcccggcctc aaggcatcgg gccacttcgg
    18181 tgatctggta ttcgaaaccg ttgactcgat gagccacatg cacctcgtcg accttttcgc
    18241 cttccagagt tgtaagcgtc atctgctcgg cacgccagaa gcgtggaatg tcgacatggc
    18301 ccttggaccc gacaatgcgt ccgtcgacgc caaggtcggt attgatcgca gagttgagct
    18361 tggccaaccc accggtgggg tattcggcgg tcacggaaag gcggacatcc acaccatcgg
    18421 cagatagttc agcctcagcg tcaaaggaaa gaggcgggga ctggaatacc agttctgcca
    18481 aggtcaaggt gtagatcccg acgtcgagca ggctgcctcc ggccgattcg ggcgcccaaa
    18541 gacgactatt cgggtcatag ggggcgttga agccgaagtt cgcttcgacc atttgaatct
    18601 cgcctagacg cccttcctcg atccacttcc tgcatgccgc catgacagga aggtgccgag
    18661 tccacatggc ctccatgaga aaggtccccg atagttgaga gatctcgatc atttgtcgaa
    18721 cctgggcggc gttgaccgcc atcggtttct cgcacaacac gggaaccccg gcgtccagga
    18781 gagtcacgga aacgtctcga tgactgctgt gcggggtggc gacgtaaacg gcgtccacct
    18841 cgcctacgag gtcgcccaag tcgcaactcg acgcgccgat accgtgatcg tctgcgaaag
    18901 ccg
//
LOCUS       DASCMR010000243         4235 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001159338, whole genome shotgun sequence.
ACCESSION   DASCMR010000243 DASCMR010000000
VERSION     DASCMR010000243.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4235)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4235)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4235
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001159338"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1003)
                     /locus_tag="QGG16_05815"
     CDS             complement(<1..1003)
                     /locus_tag="QGG16_05815"
                     /inference="COORDINATES: protein motif:HMM:NF023462.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3524 domain-containing protein"
                     /protein_id="HJP24825.1"
                     /translation="MARVLLVEPFYGGSHGAWADGLVAYSRHEMVVVSHPAAAWRWRM
                     RGGALTLAEAARRAVAEHGPPEVVLVSGMVDLAGWLGLTRRFLGDPPVVLYLHENQLM
                     YPVSPNQKGSASDEMPLVNWMGMAGADQVWCNSAFQRDGLLAALPDLLKRAPDHSHVG
                     FLSEVADRCHVVPVGVDLADVPIPEGTVSEEIVSANSTGPLVLWNQRWDHDKNPKAVL
                     NALRHLADEGVAFRVALVGENERVDPREFVEARDHLGDRVVAWGFQDRAAYVDLLDRS
                     DVVVSAAHHEFFGIAVVEAMAAGCVPVLPTGQSYPELVGSWSEDALYPEGGLRTRLRD
                     "
     gene            complement(1012..2130)
                     /gene="alr"
                     /locus_tag="QGG16_05820"
     CDS             complement(1012..2130)
                     /gene="alr"
                     /locus_tag="QGG16_05820"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008784 - alanine racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HJP24826.1"
                     /translation="MRPTWVSVDLDAVGHNVAAFDALVGDAAVCAVVKADGYGHGAPA
                     VADAAVRAGATWLAVALVEEAADLRAAGLTAPILVLSEPRPDEMAEVVALGGVRPTLY
                     TPVGIDAYAAAVHSTRAGVGPSAVHLKVDTGMHRVGVRPEEALATARHISDTGLILEG
                     VFSHCSTADVPEDPFTGVQVDRFNAVLATLAAVGIEPPVVHLANTAASVTRPDTHRSL
                     VRVGIGMYGVSPGPDVAEPCRALGLRQAMSIRSEVTHLHVVPSGEGVGYGHRWVADHE
                     TILATVPMGYADGLARAWGLGGEALVGGRRRPLRGVVSMDALMVEVDGSVSLGDEVVL
                     LGSQGDEEIGAGEVADTIGIIPWEVLCSLSQRPPRRYP"
     gene            complement(2130..3563)
                     /locus_tag="QGG16_05825"
     CDS             complement(2130..3563)
                     /locus_tag="QGG16_05825"
                     /inference="COORDINATES: protein motif:HMM:TIGR00196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052855 - ADP-dependent NAD(P)H-hydrate
                     dehydratase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HJP24827.1"
                     /translation="MIPVCTPDEMATVDAAATEPLEVLIGRAGAAVARAVLDELGGGY
                     GRRVAVLAGKGSNGADGRVAAGLLARRGVRATVVDAAATSDHLPTAGDHAVDLVVDAA
                     YGTGLGRPFDAPAVVAPVLAVDLPSGLDGLTGEARGRPLSARRTVTFAALKPGLLFGD
                     GPALAGRIEVVDLGLDVSGATSYLLTDGDIAGLVPPRPVNAHKWQRACWVIAGSSGMK
                     GAAGLAATAALRAGAGYVRLSVPGDDGPGISDELGVPAEVVRMPVTTDLGLDGPEGLD
                     GDRFASMVVGPGLGTAPEVADAVRRLVASSGPPLVIDGDGLAALTVPAGGRVATAGRP
                     LILTPHDGEFTRLAGGPPGLDRMAAARALAADTGAVVLLKGPTTVVAAPDGQVRFAAA
                     GDARLATAGSGDVLAGIIGAFLARGAAPLEAAAAAAHVHGRLVTGPGIDGPPMAGSST
                     GVAAGDLAARLVSVLTNLSVDASGGAS"
     gene            complement(3578..3943)
                     /locus_tag="QGG16_05830"
     CDS             complement(3578..3943)
                     /locus_tag="QGG16_05830"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HJP24828.1"
                     /translation="MIGIGVDLVDIDRFRGSLDRTPSLRDRLFRPAERAYADAHVDPA
                     SRYAVRFAAKEATLKALGLGLGGMDMYDIEVVRDGLGPPSMVLHGESAEVARRAGVSR
                     WLVTLSHTDTLAQATVVAL"
     gene            complement(3963..>4235)
                     /locus_tag="QGG16_05835"
     CDS             complement(3963..>4235)
                     /locus_tag="QGG16_05835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24829.1"
                     /translation="RIIVLVPEVKDRETVGITLLHVVLRERLTPDVLRGVLQGYGNRY
                     SAVRDAVCETEPDLRDDLLAEVSVVDLLTDPVSDIADRVRADRLRA"
BASE COUNT          745 a         1570 c         1368 g          552 t
ORIGIN      
        1 cgtcacgcag acgggtccgc agtccacctt ccggatagag ggcgtcctcg gaccacgatc
       61 ccaccagctc cgggtagctc tgcccggtcg ggaggaccgg cacgcagccg gcggccatgg
      121 cttccaccac ggcgatcccg aagaactcgt ggtgcgccgc gctgaccacc acatctgacc
      181 ggtccaacag gtcgacgtag gcggcccggt cctggaaccc ccaggccacc acccgatcgc
      241 caaggtggtc ccgagcctcg acgaactccc tcggatcgac ccgttcattc tcgcctacca
      301 gagccaccct aaaggccacg ccctcgtcgg ccaggtggcg tagcgcattc aacacggcct
      361 tcgggttctt gtcgtgatcc cagcgttggt tccagagcac cagcgggccc gtcgaattgg
      421 cggaaacgat ctcttcagaa accgtccctt caggaatggg cacgtcggcc aagtcgacgc
      481 ccacgggcac cacgtggcac cggtcggcca cctcgctcag gaatccgaca tgggaatggt
      541 cgggggcccg cttcaggagg tcgggcaggg cggccaacag tccatcgcgc tggaacgccg
      601 agttgcacca cacctggtcg gcgccggcca tccccatcca gttgaccaac ggcatctcgt
      661 cggacgccga ccccttctgg ttgggactca ccgggtacat caactggttc tcgtgcaggt
      721 agagcaccac cggcggatca cctaggaagc gtcgggtgag gcccagccag cccgctaggt
      781 cgaccatgcc ggagaccagc accacttcgg gcgggccgtg ctcggccacc gcccggcggg
      841 ccgcctcggc cagagtgagt gccccgcctc gcatccgcca acgccacgcg gcggccgggt
      901 gcgagacgac gaccatttcg tggcggctgt aggcgaccaa accatcggcc cacgctccgt
      961 gggagccccc gtaaaacggt tcgacgagca agactcgggc cattttcgga cctaggggta
     1021 acgtcggggc gggcgttgac tgagcgaaca gaggacctcc cacgggatga tcccgatcgt
     1081 gtcggcgacc tcaccggccc cgatctcctc gtcgccctgg ctgcccaaaa ggaccacctc
     1141 gtcgccgagg gagaccgacc cgtcgacttc gaccattagg gcgtccatcg agacgacgcc
     1201 acgtaatggc cggcgtcgac cacccaccaa cgcctcgcca cccaggcccc acgcccgggc
     1261 caggccgtcg gcgtagccca tgggtacggt ggccaggatg gtctcgtggt cggccaccca
     1321 acggtggccg taccccactc cctcgcctga cggcacgaca tgcaggtgag tgacctcact
     1381 gcggatggac atggcctgac gaagaccaag cgcccggcag ggctcagcca cgtccgggcc
     1441 gggcgatacg ccgtacattc cgatgccgac ccggaccaac gaacggtggg tgtcgggacg
     1501 ggtgaccgaa gcagccgtgt tggccaggtg gacgaccggc ggttcgatac ctacggcggc
     1561 cagggtggcc agcacggcgt tgaagcggtc aacctgcacc ccggtgaacg gatcctcagg
     1621 cacatcggcc gttgaacagt gcgagaacac tccctcaagg attaggccgg tgtcactgat
     1681 gtggcgcgcc gtggctagtg cctcctcggg ccgcaccccg acccggtgca ttccggtatc
     1741 gaccttcaga tggacggccg acgggcctac cccggcccgg gtcgagtgga ccgcggcggc
     1801 ataggcgtcg atcccgaccg gcgtgtagag ggtggggcgc accccaccga gggccaccac
     1861 ctcggccatc tcatcgggcc ttggttcgga caggaccaag atgggagcgg tcagcccggc
     1921 cgcccggaga tcggcggcct cctcgaccag ggccacggcc aaccaggtgg ctccggcccg
     1981 taccgccgcg tcagccaccg ccggggcacc gtggccgtac ccgtcagcct tgacaaccgc
     2041 gcagacggcg gcgtcaccca ccagggcgtc aaaggcggcc acgttgtggc ccacggcgtc
     2101 caagtcgacc gacacccagg tgggacgcat cagcttgcgc ctcccgaggc atcgacggaa
     2161 aggttggtca gcacggacac cagcctcgcc gcaagatcgc ccgccgccac cccggtggac
     2221 gaacccgcca tcggggggcc atcaatgccc ggcccggtga ccaggcgtcc gtgcacatgg
     2281 gcggcggcgg ccgcggcctc caacggcgcg gccccacggg caaggaaggc cccgatgatc
     2341 ccagccagca catcaccgga cccagcggta gccaggcggg cgtcgcccgc cgcggcgaac
     2401 cgaacctggc cgtcgggggc ggcgaccacc gtggtcggac ccttcaggag caccacagcg
     2461 ccggtatcgg cagctagggc acgggcggca gccatgcggt ccaaaccagg cggcccaccg
     2521 gccagacggg tgaactcacc gtcgtgcggg gtcaggatca gcggcctccc cgcggtagcc
     2581 acccgaccgc cggccgggac ggtgagggcg gccaggccat caccatcgat gactagcggt
     2641 gggcccgacg aggccaccag ccgtcgcact gcgtcggcca cctcgggggc ggtccccaat
     2701 cccgggccga ccaccatcga ggcgaaccgg tccccgtcca agccctcggg gccatctagc
     2761 cccaggtcag tggtgacggg catccgtacc acctcggccg ggacacccag ctcgtcggaa
     2821 atacccgggc catcgtcgcc gggtacagac agacggacgt agcccgcccc ggcccgcagc
     2881 gccgcggtgg cggccagacc agcggccccc ttcatgcccg atgagccagc gatgacccag
     2941 caggcccgct gccacttgtg ggcgttgacc ggacgtgggg gcaccaggcc agcgatgtcg
     3001 ccgtcggtca gcagatagga cgtcgccccc gacacgtcga gacccaggtc caccacctcg
     3061 atccgtccag ccagcgccgg accgtcaccg aacaacaggc ccggcttgag ggccgcaaag
     3121 gtcacggtcc gacgagcgct taggggccga ccccgcgcct cgccggttag accgtcgagg
     3181 cccgacggga ggtccacggc cagtaccgga gcgacgacgg cgggtgcatc aaaagggcgg
     3241 ccaagcccgg tgccgtaagc ggcatccact accaggtcca ccgcgtgatc ccccgcggtc
     3301 ggtaggtggt ccgaggttgc ggcagcatca acgaccgtcg cccgcacccc ccgtcgggcc
     3361 agcagaccgg cggccacccg gccatctgcg ccgttggatc ccttgccggc aagcacggcc
     3421 actcgccgtc cgtatcctcc acccaactcg tccagtacgg cacgggccac tgcggcaccg
     3481 gcccgtccga tcaggacctc tagcggttca gttgccgcgg catccacggt ggccatctca
     3541 tccggcgtac acaccgggat cacgtcggat cgactcctca gagagcgacg acggtcgcct
     3601 gggccagagt gtcagtgtgg ctcagtgtga ccaaccagcg gctcacgccg gcccgccggg
     3661 ccacctcggc tgactcaccg tggagcacca tcgaaggagg ccccagcccg tcgcgcacca
     3721 cctcgatgtc gtacatgtcc atcccgccga gacccagacc gagagccttg agcgtcgcct
     3781 ccttggccgc gaaccgcacc gcgtagcgac tggccgggtc cacatgggca tcggcatagg
     3841 cccgctcagc cggtcggaac agccggtctc gtagcgacgg cgtgcgatcc aacgagcctc
     3901 ggaaccggtc gatatcgact aggtccactc cgatgccgat catggtcggt agagcgccgg
     3961 actcaggccc ggagccggtc ggcccgcact cggtcagcaa tgtccgacac cgggtcagtc
     4021 aacaggtcga ccaccgacac ctcggctagc aagtcgtctc gtaggtcggg ctcagtctca
     4081 caaaccgcgt cacgcaccgc ggaatagcgg ttgccatagc cctgcagcac gccacgcagg
     4141 acgtccgggg tgaggcgctc gcgcaacacc acgtgcagca gggtgatacc caccgtctcg
     4201 cggtccttga cctcgggcac cagcacgatg atccg
//
LOCUS       DASCMR010000244         2720 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001171816, whole genome shotgun sequence.
ACCESSION   DASCMR010000244 DASCMR010000000
VERSION     DASCMR010000244.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2720)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2720)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2720
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001171816"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1506)
                     /locus_tag="QGG16_05840"
     CDS             complement(<1..1506)
                     /locus_tag="QGG16_05840"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HJP24830.1"
                     /translation="MAPTSHPLADLRVLDLTDGRGDLCGRLLADFGADVLRIEPPEGV
                     ESRRRAPFGPDGSSLHFAVRNSNKRSAVLDLQNPEAVRDRETFLARVADADVVVESWT
                     PGTLDRLGLGPDVLLAANPELVVASLTDFGQTGPDRDLASTDDVVFALSGWQSLSGVP
                     DKPPLLLPGSIASDTVGILGAFAVLVALVHRARGAGGQHLDVSALEAVSQMNTWGLAN
                     TSDSLRRGSIPPTVRSGDSPMYPTFDAADGKVRCVIMTRRQWSAMWEWMGSPEAFADD
                     YWADYVNRLMNADVINELYAGHWAGLPMIEGCREAQRRGVVATPLLSPADLLTDEHFA
                     ARGTFTTAEVTPGVEAPVFAGSMEIDGVRIGHRQRAPEPGEHKASFDGPRFTMSSPLG
                     PASDLPLRGLRVADLGHGGVGVECGRMLAEYGADVVKVESHAYPDFIRIIMGSEMSSP
                     FASSNRTKRCLGLDLKHPDSLQVIEHLVAWADVIVENNSTGTMAALGIGWNG"
     gene            1683..>2720
                     /locus_tag="QGG16_05845"
     CDS             1683..>2720
                     /locus_tag="QGG16_05845"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: protein motif:HMM:NF013700.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M23 family metallopeptidase"
                     /protein_id="HJP24831.1"
                     /translation="MASLLTGTLLVAVPAGAVKDTDSIRDARDRRESAKGLAAEAAEA
                     LGLVEAADEQVSDALHALDDAVALQEAKILAARQAIEAAEAEATLRWVQAEEISVEVT
                     DLRQRIRELAVDVYIGRIRPGNLLESDDLTAGVRRAAILDAVTGDRGDLVDRMRALES
                     ALEDVARSADDAIIDAQARQRELESSILVLDRRIAAKENVKGELQSRITDYEAEIRSF
                     ERQEYLMAILIDNLIAEELRKSAPDLTKESGQGFIMPMEGRLTSWFGPRMHPIFGTMR
                     QHNGVDIGCVRGQPIWAAKAGKVIFAGMKSGYGNVVLIEHEGPVITLYAHQEDLLVST
                     GYQIDKGEVLGR"
BASE COUNT          504 a          845 c          885 g          486 t
ORIGIN      
        1 gccgttccaa ccgatcccga gggcagccat cgtgcccgtc gagttgtttt ccacgatgac
       61 atcggcccac gccaccagat gttcgatgac ctggagggag tccgggtgct ttaggtcgag
      121 acctagacac cgcttggtcc gattcgacga cgcaaacggg ctgctcatct cgctgcccat
      181 gatgatgcgg atgaagtcgg gataggcatg gctttcgacc ttgaccacgt cggcgccgta
      241 ttcggcaagc atgcggccgc attccacccc gacaccgccg tgtcccaagt cggccacccg
      301 taggccccgt aacggtagat ccgatgccgg tcctagtggc gaggacatgg tgaaacgggg
      361 gccatcgaag gacgccttgt gttcaccggg ttcgggggcc cgctgtcgat gaccgatacg
      421 aactccgtcg atttccatgg atccggcaaa tactggtgct tctactccag gggtgacctc
      481 ggcggtcgtg aaggtgcctc gggcagcaaa gtgttcatcg gttaggaggt cagccggtga
      541 gagcagggga gtggccacca cccctcggcg ttgggcttcg cggcatcctt cgatcatggg
      601 cagcccggcc cagtgtccgg cgtacaactc attgatgacg tcggcgttca taagccggtt
      661 gacgtagtcg gcccagtagt catcggcgaa cgcctcgggt gaacccatcc actcccacat
      721 ggcagaccac tggcgtcgcg tcatgatgac gcatctgacc ttgccgtcgg cggcgtcgaa
      781 ggtcgggtac atcgggctgt caccagaccg caccgtgggc ggaatcgacc cccttcggag
      841 actgtcgctg gtattggcca gaccccaggt gttcatctgg ctcaccgcct ccagagccga
      901 cacgtcgagg tgttgcccgc cggctcctcg ggcccgatgg acgagggcga cgagcacagc
      961 aaaggcgccc agaatgccga cggtgtcact ggcgatcgat ccaggcaaca ggagtggcgg
     1021 cttatcgggc accccactca gggactgcca acccgacagg gcgaagacca cgtcatcggt
     1081 ggaggcaagg tccctgtcgg ggccggtctg accgaagtcg gtaagagatg ccaccaccag
     1141 ctctgggttt gcagccaaga ggacgtccgg gccgagtccg agtctgtcga gagtccccgg
     1201 tgtccacgac tcaacaacta cgtcagcgtc cgcaactcgg gccaggaagg tctcccggtc
     1261 tcggacggcc tccggattct gcaggtctag gaccgcggat cgcttgttgg agttgcgtac
     1321 agcgaaatgt agtgacgacc cgtccgggcc aaatggagcc cttcggcggg actccacccc
     1381 ttccggcggc tcgatccgta gtacatcggc accgaagtcg gctagtagtc gaccgcagag
     1441 gtcgccccga ccatctgtca gatcgagtac ccgtaggtcg gcgagcggat gacttgtggg
     1501 ggccatgcgc gatggtctac cacctgcccc cgatggccat ggaacccacg ggtaccctct
     1561 cggccgagac gattcccttc accacagtgc cactccgacc tatccccacc tccgttgcgt
     1621 cctccagacg cctgctcgtt tggcgagcgc accgtctacg ggctgttgtt ctggtcggac
     1681 tgatggcctc gttgttgacc ggaacgctcc tggtggccgt gccggccgga gcggtcaagg
     1741 acaccgattc cattcgggac gcacgggacc gcagggagtc ggctaagggc ctggcggcgg
     1801 aggctgccga ggcactcggg ttggtggagg ccgccgacga gcaggtttcg gatgcactgc
     1861 acgcccttga cgatgccgtg gcgctccagg aagccaagat cctcgcggcg cggcaggcca
     1921 tcgaggctgc cgaggccgag gccactctgc ggtgggttca agccgaggaa atctccgtcg
     1981 aggtgaccga tctacgacag cggattaggg agttggccgt cgacgtctac atcggccgga
     2041 tccgccccgg caacctcctg gagtccgatg acctgaccgc cggggttcgg cgtgctgcca
     2101 tcctcgatgc ggtgaccggc gaccggggag atctggtgga ccggatgcgg gcactggagt
     2161 ccgccctcga agacgtcgca cggtccgccg atgacgcgat catcgacgcc caggcccggc
     2221 aacgcgagct tgaatcgtca atcctcgtct tggatcgaag gatcgccgcc aaggagaacg
     2281 tgaagggtga gctccagagc cgtattacgg actatgaggc cgagatcaga agctttgagc
     2341 ggcaggaata cttgatggca atcctgatcg acaacctcat cgccgaggaa ctccggaagt
     2401 cggcccctga tctgaccaag gagtcaggcc aggggttcat catgcccatg gagggccgcc
     2461 tgacgtcctg gttcggcccc cgcatgcacc caatctttgg aacgatgcgt cagcacaacg
     2521 gtgtcgacat cggctgtgtt cgaggacagc cgatctgggc cgctaaggcg ggcaaggtga
     2581 tcttcgcggg catgaagtcc ggatacggca acgtcgtcct gatcgagcac gagggtccgg
     2641 tcatcacgct gtacgcacat caggaggacc tccttgtatc gacgggctat cagatcgata
     2701 agggggaggt gttgggaagg
//
LOCUS       DASCMR010000245         2084 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001174510, whole genome shotgun sequence.
ACCESSION   DASCMR010000245 DASCMR010000000
VERSION     DASCMR010000245.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2084)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2084)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2084
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001174510"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..584)
                     /locus_tag="QGG16_05850"
     CDS             complement(<1..584)
                     /locus_tag="QGG16_05850"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJP24832.1"
                     /translation="MAPPTGTAVHLEGLGKRFRLTHDRNWTLKATMLAGHRTRYEEFW
                     ALRDLDLEIPHGSTFGIIGGNGSGKSTLLKVLAGILRPDEGTATVDGRLSALLELGAG
                     FHPELTGRENVYLNGAILGFTSRDIRRRFDDIVGFAELDRFIDEPVRNYSSGMYVRLG
                     FSVAIHVEPEILLVDEVLAVGDHSFQRRCLDRFA"
     gene            complement(587..1432)
                     /locus_tag="QGG16_05855"
     CDS             complement(587..1432)
                     /locus_tag="QGG16_05855"
                     /inference="COORDINATES: protein motif:HMM:NF013245.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP24833.1"
                     /translation="MPLPRLPRSRRDLHALLPVDLLVNLTLRDLRSKYKRSALGWTWS
                     VLNPVVAVVVYSAVFSVFLRIEPSIGDPSGLHSYAVFLLVTLLPWQFHVTSLTEATRA
                     ITANAPLVTKIYFPRWVLPTSSVLARFLTLLVEMAVLLVLIAVLQGHVAFQWIPVLVL
                     LMALQLLFTIGLALMISAANVYFRDVQHFLGVALAPWMFLTPILYPLNMVPADREFLG
                     VGYRTLYQLNPMVSWAKAYRNVLYDLRFPSAERWLAIVAATAIVLVAGFRVFNRLEPR
                     MAEEV"
     gene            1535..>2084
                     /locus_tag="QGG16_05860"
     CDS             1535..>2084
                     /locus_tag="QGG16_05860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24834.1"
                     /translation="MNTKPPTPIPDYEPDYEPGYPPEPESTSSGPFLRRCYVRLWRVG
                     FRWLYALDAVGILFVVVAVTVARFGTDWPDPGELTAGMVALTAILQITFYFGGLYEKQ
                     ARLGHRMWFARVVGLTLVALAVGFVLVLPTGRYAVPRANLAAIGVGVVLVATGTRVLS
                     RQLRSRRFGPPSVLLVGSTDETE"
BASE COUNT          349 a          657 c          757 g          321 t
ORIGIN      
        1 tgggcgaacc ggtccaggca gcgccgctgg aacgagtggt cgcccacggc cagtacctcg
       61 tcgaccagca ggatctccgg ttcgacgtgg atggccaccg agaatcccag gcggacgtac
      121 atccccgacg agtagttgcg taccggctcg tcgatgaagc ggtccagttc ggcgaagccc
      181 acgatgtcgt cgaagcgccg acggatgtcc cttgacgtga agcccaggat ggcgccgttc
      241 aggtacacat tttcgcggcc cgtcaactcc gggtgaaagc cggcgcctag ttccaggagg
      301 gccgacaggc gaccgtcgac ggtcgccgtg ccctcgtcgg ggcggaggat cccggccagc
      361 accttcagca gggtgctctt gcctgagccg ttgccgccaa tgatcccgaa ggtcgaacca
      421 tgggggatct ccaggtccag gtcacgcagg gcccagaact cctcgtagcg ggtgcggtgg
      481 ccggccagca tggtggcctt gagggtccag ttccggtcgt gggtgaggcg gaaccgcttg
      541 cctagaccct cgaggtgcac cgccgtgccg gtgggtggcg ccatgctcac acctcctcgg
      601 ccatgcgggg ctcgagccgg ttgaacacac ggaacccggc taccagcacg atggctgtgg
      661 cggccacgat ggccagccac cgttcggctg acgggaacct caggtcgtag agaacgttcc
      721 ggtaggcctt ggcccacgac accatcgggt tcaactggta gagggtccgg tagccgacgc
      781 ccaggaactc ccggtcagcc gggaccatgt tgagcgggta gaggatgggt gtcaggaaca
      841 tccacggggc cagcgccaca ccgaggaagt gctggacgtc acggaagtac acgtttgctg
      901 cgctgatcat gagcgccagc ccgatggtga acagcagttg cagggccatg aggagcacca
      961 gcaccgggat ccactggaag gccacgtggc cctggaggac ggcgatgaga accagcagca
     1021 ccgccatttc gaccagcagg gtcaagaagc gggccaagac cgacgaggtg ggcagcaccc
     1081 agcgggggaa gtagatcttg gtgaccagcg gggcgttggc cgtgatggcc cgggtggcct
     1141 cggtcaggct ggtcacgtgg aactgccatg gcaacagggt gacgagcagg aacacggcgt
     1201 aggagtggag gccgctgggg tcgccgatcg acggttcgat gcgcaggaac acggagaaga
     1261 cggccgagta gacgaccacc gcgaccaccg ggttgagtac cgaccacgtc cagcccaacg
     1321 ccgaacgctt gtacttggac cggaggtccc gcaaggtgag gttgaccagg aggtccaccg
     1381 ggaggagcgc gtggaggtcg cggcgcgacc gcggtagccg ggggaggggc accgaccgag
     1441 cctaccggtc ggccccgtgg cggccggggg cgccccggcg caccggtggg gcggggcgcc
     1501 ggtggctgcc ttctacgctg atcgggatcc ttcgatgaac accaagccac ccacccccat
     1561 cccggactac gaaccggatt acgaaccggg ctacccgccg gaaccggagt cgacgtcctc
     1621 gggcccgttc ctgcgccggt gctacgtgcg tctgtggcgg gtcggcttcc gctggttgta
     1681 cgcgctggat gccgtgggga ttttgttcgt ggtggtggca gtcaccgtgg cccgcttcgg
     1741 aaccgactgg ccggacccgg gcgaactgac ggccggcatg gtggccctga cggcgatcct
     1801 ccagatcacg ttctacttcg gcgggctata cgagaagcag gcccggctgg gccatcggat
     1861 gtggttcgcc agggtggtcg gcctgaccct ggtcgctctg gccgtcgggt tcgtgctggt
     1921 gctgcccacc ggccgctacg ccgtcccccg ggccaacctg gcggccattg gcgtgggcgt
     1981 ggtgctggtg gccaccggca cccgggtcct gtcgcgccag ttgcggtccc gacggttcgg
     2041 tccgccgagc gtgctgctgg tcgggtcgac tgacgagacg gagc
//
LOCUS       DASCMR010000246        11682 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001179806, whole genome shotgun sequence.
ACCESSION   DASCMR010000246 DASCMR010000000
VERSION     DASCMR010000246.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 11682)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11682)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11682
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001179806"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(137..209)
                     /locus_tag="QGG16_05865"
     tRNA            complement(137..209)
                     /locus_tag="QGG16_05865"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(174..176),aa:Thr,seq:cgt)
     gene            complement(295..2685)
                     /locus_tag="QGG16_05870"
     CDS             complement(295..2685)
                     /locus_tag="QGG16_05870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HJP24835.1"
                     /translation="MALSEPESAPDGGSDTGSGLNPDQLDAVTHLTGPLLVVAGAGSG
                     KTRVLTRRIAHLIGERDVSPFAILAITFTNKAAGEMKERVAELVGSVANRMWVSTFHS
                     ACVRILRRDGDRLGFPSSFSIYDQGDAVRLTGYVVRDQGLDIKRFPARAVHSAISAAK
                     NEGRTAGQYVEHATGPYEKRIGEVFVNYQARLLAAGAMDFDDLLGNAVRLLREHPDVL
                     DHYRQRFEHVLVDEYQDTNVVQNDLVMLLASGHRNVCVVGDSDQSIYRFRGADIRNIL
                     EFERSFPDATVVVLDQNYRSTQTILDAANAVITRNGGRKPKELWTDAGSGEPITRFRA
                     DDENDEARWVVSQLRRLHDGGRPWTDMAVFYRTNAQSRAVEEQLVMLGVPYKVVGGLR
                     FYDRREVRDAMAYLKLATNPADEVAAKRVLNVPKRGVGNTSVARLDAHAASKDVRFVD
                     ALRDSEAAGVLGRAATGIRSFLELVDALAQAVDDGPATILEVALERSGYLEELRADRS
                     IEAEGRLENLSELVGVASEFDDVDEFLERVGLVADTDDLPAQNTEGGDPEGGDLAASD
                     TDPGQVVLMTMHAAKGLEYPVVCIVGMEDGVFPHVRALGDPEELEEERRLAYVGITRA
                     RERLMLTHTWSRMLHGQTQYNPPSRFLDEIPSELLVDAEGTRKANRRKDDSWPGSGAG
                     ASRSRSADTDWLGAPRRSSNRDAEPSGRVFGGGSSNGGSTRSPGESSSGAHELGLRVG
                     DDVVHRAWGDGVVLAVHGDGDRAEAVVRFASKGEKRLLLAWAPLVRPGDVPEEGSG"
     gene            2801..3733
                     /locus_tag="QGG16_05875"
     CDS             2801..3733
                     /locus_tag="QGG16_05875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03621 family F420-dependent LLM class
                     oxidoreductase"
                     /protein_id="HJP24836.1"
                     /translation="MTRSFRFSVQASAPRPAAEWRELGRRAEDLGYSALSVSDHLDAE
                     MAPLIALAVTAEATRDLRLTTLVLGNDFRHPLFLAKQAATLDLLSDGRLELGLGAGWK
                     TSDYDQSGISLDSPGVRIARLAESVEILKRSFAEGSFDFDGEHYTVREHDGQPTCIQS
                     PHPPFLLAGGGKKMLSLAAREADIVGVNANMAAGVIDQRAGASATVEATDEKLGWIRE
                     AAGDRFEDIELQTRVHMSQITDDPIGLAELMAPALGLDAEAALSSPHVLIGSTGQCVE
                     TLLAWRERWGLTYIGLNEDSMVEFGPVVEALAGV"
     gene            complement(3781..4623)
                     /locus_tag="QGG16_05880"
     CDS             complement(3781..4623)
                     /locus_tag="QGG16_05880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24837.1"
                     /translation="MTDDNHDPEMGPMHLVTAGSMLYTLVDPEKGYEVAYNRWYERDH
                     FYGGCMTGPWCFAGSRWVATRAMKDLRFPVEDNSVNKPVDRGSYLAVYWVENGHHDDH
                     FAWGADQVVKLYMAGRGFQERRHAHTVLYKHRSNRYRDADPVPVDVALDHHYAALVSV
                     VVEPVVEPPDGTAGDDLSAWLDGEGLPGLMADGPVASCAQWAAVPRDEMTDNAPMDLG
                     SPPIGPEATMQLFFVETDPRDCWDRFVDYAARLEASGLGRVTSASPFLRTVVGTDRYT
                     DQLW"
     gene            complement(4644..5471)
                     /locus_tag="QGG16_05885"
     CDS             complement(4644..5471)
                     /locus_tag="QGG16_05885"
                     /inference="COORDINATES: protein motif:HMM:NF025008.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HJP24838.1"
                     /translation="MTGKPAQTDHAYSDEPFYAEQDGLLIPGRLTGGPWDPTIQHGGP
                     ISGVLAHLVEAVPAPSPMRTARHTVDMMRGAPMTPLRPEVEVLRSGRRIQVVRASLFD
                     GEDREVARATSLRMRVSDTPNPVDPNKTAHSDDEPHPVPDEPVLLTMFGIGVPAFLQA
                     VEFRRTGEYRDGAPGLVWLRMHNTMVEGRPTSAFVRLATVADMASMAAQYLSPEEWTT
                     INADLAVTAFRDPVGDWVGIRGLHKNDGDGIGLSEAVLYDLDGRVGRATASILIEPR"
     gene            complement(5479..6069)
                     /locus_tag="QGG16_05890"
     CDS             complement(5479..6069)
                     /locus_tag="QGG16_05890"
                     /inference="COORDINATES: protein motif:HMM:TIGR03086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03086 family metal-binding protein"
                     /protein_id="HJP24839.1"
                     /translation="MSPGPLTDGERTDTLAAYTSACAFFGERLAEVTELDWMAETGCP
                     DWDVRMLVAHVVTGEALVTRVLRDGGAWESQADPSILGLNPMAAWRGTVLAAIESASV
                     DGVLDAMHPYAVGELPGAVIIGFRVTENLVHGWDLARACGTDIALPEALAERCLDFWM
                     PLAGSAALSGHFGPTVMPPDGAPAGVRLLSLLGRTA"
     gene            complement(6066..7628)
                     /gene="guaA"
                     /locus_tag="QGG16_05895"
     CDS             complement(6066..7628)
                     /gene="guaA"
                     /locus_tag="QGG16_05895"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HJP24840.1"
                     /translation="MAETPGGSARATDRILVVDFGAQYAQLIARRVREADVFSEIVPH
                     DLTAAEFAERAPTGIIFSGGPASVHVDGAPRIDPGVYDLGVPILGICYGAQLIAHQRG
                     GTVGRNEHGEYGRTELTVADTGVLLGDAGTGSHSVWMSHFDAITDAPGGATVTASSPD
                     APVAAFEAPDDGLYAVQFHPEVHHTPCGQDLLTRFVRDVCGCAGDWTMASVIDSSVDA
                     IREQVGTGRAICGLSGGVDSAVAAALVHRAIGSQLTCVFVDTGLMRAGEGEQVVDTFQ
                     KTQGIELIHVRAADRFFDKLAGVTDPEDKRKVIGELFIRIFEDASSGITDAKFLVQGT
                     LYPDVIESGTKDAAKIKSHHNVGGLPDDMDFALVEPLRNLFKDEVRAVGSELGLPDEI
                     VWRQPFPGPGLGVRIVGEVTPETAATLQAADLIVREEIREAGLEREIWQAFAVLPDIR
                     SVGVMGDERTYAKPIIIRAVTSEDAMTADWARLPYDLLEKMSNRIINEVDGVNRVAYD
                     ITSKPPGTIEWE"
     gene            complement(7680..8849)
                     /locus_tag="QGG16_05900"
     CDS             complement(7680..8849)
                     /locus_tag="QGG16_05900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015797926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GuaB3 family IMP dehydrogenase-related protein"
                     /protein_id="HJP24841.1"
                     /translation="MAEIEIGIGMGKSGRRAYGFDDIAIVPSRRTRDPEDVDISWQID
                     AYRFDLPLMGSAMDGVISPATAIEIGRLGGVGVLNLEGLWTRYEDADSILAEIAEQPV
                     EKATKRMQELYQQPIIPDLVTERIREINAAGVVSCASVTPQRTHGMIENILAGELDML
                     VIQGTVVSAEHVSTTVEPLNLKTFIRQLDIPVIVGGCATNKAALHLMRTGAAGVLVGV
                     GPGHACTTRGVLGLGVPQATAIADVRAARMRHLDETGVYCHVIADGGMATGGDISKAI
                     VCGADAVMIGSPLAAASEAPGRGYHWGMATFHPTLPRGARVQTATRGSLEEILLGPAN
                     ENDGKLNLFGGLRTSMATCGYLDVKEFQKAEVMVAPALMTEGKSLQKSQGVGMGH"
     gene            complement(9022..10473)
                     /locus_tag="QGG16_05905"
     CDS             complement(9022..10473)
                     /locus_tag="QGG16_05905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HJP24842.1"
                     /translation="MTDRPSEQPTGPEHMTPDEFREAGRVAIDWLADFLADHRDGGHD
                     RPIVPDVAPGDVYRSLPSSPPAVGEPFADLLTDVDRLIVPATTQWQHPGFYGFFPADS
                     SPPSILGELISAGLGVQGMMWSTSPACTELETLVLDWLVEACGLPDRFRSDGPGGGVI
                     QDSASSASLCAVLAARDRSGGAAELPRLRVYTSAQAHSSIEKDILVAGFAREQLRVVP
                     TDVGFAMDADALAAMVAADEAEGLVPCLIAATVGTTSSGAIDPVARVCDVAGPVGAWV
                     HVDAAWAGSATVCPEYRHLLDGLDRVDSYCFNPHKWLLTNFDCSAFFVADSGPLLDSL
                     SIVPEYLRNAASDAGEVIDYRDWQVPLGRRFRSLKLWFVLRSYGTDGLRAHIRSHVAA
                     TTDLADRVASNPSLEMAAPLSLGLVCFRHVDGDEASEHLLATVNASGRAFLTHTRLDD
                     RYALRVAVGGTWTTAEHVTELADLLDALVFDGP"
     gene            complement(10498..11217)
                     /locus_tag="QGG16_05910"
     CDS             complement(10498..11217)
                     /locus_tag="QGG16_05910"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: protein motif:HMM:NF012514.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005777 - peroxisome [Evidence IEA];
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003986 - acetyl-CoA hydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0008413 - 8-oxo-7,8-dihydroguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_function: GO:0010945 - CoA pyrophosphatase activity
                     [Evidence IEA];
                     GO_function: GO:0030145 - manganese ion binding [Evidence
                     IEA];
                     GO_function: GO:0035539 - 8-oxo-7,8-dihydrodeoxyguanosine
                     triphosphate pyrophosphatase activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0009132 - nucleoside diphosphate metabolic
                     process [Evidence IEA];
                     GO_process: GO:0015938 - coenzyme A catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HJP24843.1"
                     /translation="MTAVVRPTGLGGPQEIPRPDGWRLGEAPPWGALVDRHLTLGHLV
                     AVFVGREPGGIRGRPRGDEREAGVLVALYDDPEGGGPHVVLTRRSPSLSSHTHEVSFP
                     GGRHDPTDPDLWATALREAEEEIGLDPSLVRLVGRLDPLVTVGSRSLIHPFVAVLDGR
                     PDLVANPDEVEAILHVPLAELLLDEVYREEEWSTYGDPWIITFFELVGDTIWGATAAM
                     LRQLLALALGVDDHRNYRADS"
     gene            complement(11214..11546)
                     /locus_tag="QGG16_05915"
     CDS             complement(11214..11546)
                     /locus_tag="QGG16_05915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24844.1"
                     /translation="MSDPVVFDDSTVPDHRPAPDSVKLAGQFAEWIRGETLVGRMLAN
                     LKTGRFPEVLAAAALAAEDDDPRAELVAALSVHWDGWERGSIVPLEVAEGLRDAGLEA
                     FLADPIEQ"
BASE COUNT         1966 a         3881 c         3957 g         1878 t
ORIGIN      
        1 caacccgccg atagccagcg gcacggccaa ccagtagtgc cagatcacgc ctgcgaacaa
       61 gttcatgggt tagatcctag gggtttggcc cccgccggca tgaagccgat cggcgggagg
      121 cggtggatgc tcggcgagcc cgcgcgggga atcgaacccc ggacctattc attacgagtg
      181 aatcgctctt ccgactgagc tacacgggcc tgtaccggcc ccaaggggtc ggctacccgg
      241 gcagcgtaac ggcctgccta ctcctcgggt cgcccctcga acgtctcccc ggagctaccc
      301 ggacccctct tcggggacgt caccgggtcg gaccaacggc gcccaggcca gcagcaggcg
      361 cttctcgccc ttggaggcga aacgcaccac cgcctcggcc cgatcaccgt ctccgtggac
      421 ggccaggacc actccatcgc cccatgcccg gtggaccaca tcgtcgccga cccggaggcc
      481 caactcatgt gcccccgatg aggactcccc ggggctacgg gtagatcccc cattgctcga
      541 acccccgccg aacacccggc cggatggttc ggcgtcacga ttggaagatc gtcggggggc
      601 gcccaaccag tcggtgtcag cggaccgcga cctcgatgca ccggcaccag aacccggcca
      661 gctgtcatcc tttcgccggt tggcctttcg ggttccctcg gcgtcgacca gcagctctga
      721 ggggatctcg tcgaggaacc ggctgggcgg gttgtactgg gtctgcccgt gaagcatccg
      781 gctccaggtg tgagtcagca tgaggcgctc gcgggccctg gtgatgccga cgtaggccag
      841 gcgccgctcc tcctcgagtt cttcggggtc gccgagggcc cgcacgtggg ggaagacgcc
      901 gtcctccatt cccacgatgc acaccaccgg gtactcgagg cccttggcgg cgtgcatggt
      961 catgagtacg acctgcccgg gatcagtatc actggcagct agatcgccac cttccgggtc
     1021 gccgccttca gtgttctggg caggaaggtc atcggtgtcg gccacgagtc ccacccgctc
     1081 gagaaactcg tccacgtcgt cgaactcgct ggccaccccg accagttcgg agaggttctc
     1141 cagacgaccc tcagcctcga tcgaccgatc agcccggagc tcttcgaggt aacccgaccg
     1201 ctcgagggcc acctcgagga tggtggccgg accgtcgtcg accgcttggg cgagggcatc
     1261 aaccagttcg aggaacgagc gaataccggt ggcggcccgt cccaacaccc cggcagcctc
     1321 agaatcacgc agggcgtcga caaaccggac gtccttggac gccgcgtggg cgtctaaccg
     1381 ggccactgac gtgttgccta ccccccgctt gggcacgttc agcactcgct tggctgccac
     1441 ctcgtcggcc gggttggtag ccaacttgag gtaggccatg gcgtcccgaa cctcgcggcg
     1501 gtcatagaag cgaagcccgc ctaccacctt gtagggcacc cccaacatga ccagctgctc
     1561 ctcgacggcc ctgctctggg cgttggtccg gtagaagacg gccatgtcgg tccacggccg
     1621 acctccgtcg tgcaggcgcc ggagttggct gaccacccaa cgggcttcgt cattttcgtc
     1681 gtcggctcgg aagcgggtga tcggttcacc cgaacctgca tcggtccaca gttccttggg
     1741 cttgcggccc ccattcctgg tgatgacggc gttggcggca tcgaggatcg tctgggtgga
     1801 ccggtagttc tggtcgagca cgaccaccgt ggcatcgggg aacgaacgct caaactccag
     1861 gatgttgcgg atatcggcgc cccgaaaccg gtagatcgac tggtcgctgt ctcccaccac
     1921 gcagacgttg cggtgacccg atgccagcag catcactagg tcgttctgga ccacgttggt
     1981 gtcctggtac tcgtcgacca ggacgtgctc gaagcgctgt cggtagtggt ccagaacatc
     2041 ggggtgctcc cggaggaggc ggaccgcgtt gccgaggaga tcgtcgaagt ccatggcccc
     2101 ggccgccagc aggcgagcct ggtagttgac gaagacctcg ccgatccgct tctcgtacgg
     2161 gcccgtggcg tgctccacgt actgccctgc cgtgcgtccc tcgttcttgg ccgccgagat
     2221 cgccgagtgc acggctcggg cagggaaccg cttgatgtcg agcccctggt cgcgcaccac
     2281 gtagccggtg aggcgcaccg cgtctccctg gtcgtagatg ctgaaactgg atggaaagcc
     2341 aaggcgatcg ccgtcgcgcc gcaggatccg gacacacgcc gaatggaagg tcgacaccca
     2401 catgcggttg gccaccgaac cgaccagttc ggccacccgc tccttcatct cgccggctgc
     2461 cttgttggta aaggtgatcg ccagaatggc gaacggcgac acgtcccgtt caccgatgag
     2521 gtgggcgata cggcgggtaa gaacccgggt cttgcctgat ccggcaccgg ccaccaccag
     2581 caacgggccc gtcagatggg tgacggcgtc gagctggtcg gggttcagcc ccgatccggt
     2641 gtcggaaccg ccatccggcg cagattcggg ttctgagagg gccatcggcc gcaccctacc
     2701 ggtgcccggt gacggccttc cgggccgatc cgggttcgga gggaaccgcc accgagcctc
     2761 ccttcggacc gggccaccgg cctgttctat tgtgcgggcc atgactcgtt ccttccgttt
     2821 tagcgtccag gcctcggcac cccgccccgc agctgaatgg cgtgaactcg gccgccgggc
     2881 cgaggacctc ggctactcag cactctcggt ctcggaccac ctcgacgccg agatggcccc
     2941 gctgatcgcc ttggctgtga ctgccgaagc cacacgagat ctgcgactga ccaccctcgt
     3001 gctgggcaat gacttccggc acccgttgtt cctggccaag caggccgcca cgctggacct
     3061 tctctcggac ggccgcctgg agctggggct gggagccgga tggaagacca gtgactacga
     3121 ccagtcaggg atttcgctgg attcaccggg tgtgcgaatc gcccgcctcg ccgagtccgt
     3181 cgagatcctg aagcgctcct tcgccgaggg gtcgtttgac ttcgacggcg agcactacac
     3241 ggtgcgcgaa cacgacgggc aacccacctg tatccagtcg ccccatccgc cgttcctgct
     3301 ggccgggggt ggaaagaaga tgctctcgct ggctgcccgg gaagctgaca tcgtgggcgt
     3361 caacgccaac atggccgccg gggtcatcga ccagcgggcc ggcgcgtcgg caaccgtgga
     3421 ggcaaccgac gaaaagttgg gctggatccg cgaggcggcc ggcgaccggt tcgaggacat
     3481 cgaactccag acccgagtcc acatgtccca gatcacggac gacccgatcg gcctggctga
     3541 gttgatggcc ccggctctcg gactggacgc cgaggcggcg ctgtcgtcac ctcacgtgct
     3601 gatcggttcc accggccagt gcgtcgaaac gctgctggcc tggcgcgagc ggtggggcct
     3661 gacctacatc ggcctcaacg aagattcgat ggtcgagttc ggacccgtgg tcgaggccct
     3721 ggccggcgtc tgatcttggt ggtcgggccc gcccaccaga aaccgcccat ctgagcccga
     3781 ctaccagagt tgatctgtgt agcggtcggt accgaccacg gtgcgcagaa acggtgatgc
     3841 cgacgtgacc ctgcccagtc cagaggcctc gaggcgagcc gcgtagtcca cgaaacggtc
     3901 ccagcagtcc cgcgggtcgg tctccacgaa gaacaactgc atcgtggcct ccggcccgat
     3961 gggtggcgag cccagatcca tgggtgcgtt gtcggtcatc tcgtcgcggg gcacggccgc
     4021 ccactgggcg cacgacgcca caggcccgtc ggccatgagg ccgggcaggc cctcgccgtc
     4081 tagccaggcg gacaggtcgt cgccggcggt tccatcgggg ggctcgacca ccggttccac
     4141 aaccacggag accagtgcgg cgtagtggtg gtcgagggcc acgtcgacgg ggaccggatc
     4201 ggcgtcgcgg tatcggttag agcggtgctt gtaaaggaca gtgtgggcgt ggcgccgctc
     4261 ctggaagcct cggccagcca tgtagagctt caccacttgg tcggcacccc aggcgaagtg
     4321 gtcgtcgtgg tggccgttct ccacccagta gacagccagg tacgagcctc ggtccaccgg
     4381 tttgttgacc gagttgtcct caacggggaa ccgcaggtcc ttcatggccc gggtggccac
     4441 ccagcggctt ccggcaaagc accacggccc ggtcatacaa ccgccgtaga agtggtcgcg
     4501 ctcgtaccac cggttgtagg ccacctcgta gcccttctcg gggtctacca gcgtgtagag
     4561 catgctgccc gccgtcacga ggtgcatggg acccatctcg ggatcgtggt tgtcgtcggt
     4621 catggattgg tctccggatc agttcagcgg ggttcgatga ggatggacgc ggtggcccgg
     4681 ccgacccgac cgtccaggtc gtagagcacg gcctcggaca ggccgatgcc gtcaccgtcg
     4741 ttcttgtgga gtccccggat gccgacccag tctcctaccg ggtcacggaa cgcggtgacc
     4801 gcgaggtcgg cgttgatggt ggtccattct tcgggcgaga ggtactgggc cgccatggaa
     4861 gccatgtcgg ccaccgtggc cagacgcacg aaggcactcg ttgggcgccc ctcgaccatc
     4921 gtgttgtgca tgcgtagcca gaccagaccc ggtgcaccat cgcggtactc cccggtccga
     4981 cggaactcca cggcctgcag gaaggccggc acaccgatgc cgaacatggt caacagaacc
     5041 ggctcgtcgg gcaccggatg gggctcgtcg tcggaatgtg ccgtcttgtt cgggtcaacg
     5101 ggattgggcg tgtccgagac ccgcatcctg agtgaggtgg ctcgggccac ctcccgatcc
     5161 tcgccatcga acaacgaggc ccgcacgacc tggatgcgac ggcccgaccg aagcacctcg
     5221 acctcggggc gtagcggcgt catgggcgcg ccacgcatca tgtccacggt gtggcgggcc
     5281 gtgcgcatgg gcgacggggc gggcaccgcc tcgaccaggt gggccaggac ccccgagatc
     5341 ggtccgccat gttggatcgt cggatcccac gggccgccgg tcagccgacc gggaatgagc
     5401 aggccgtcct gttcggcgta gaacggctcg tcggagtacg cgtggtccgt ctgggctggt
     5461 ttcccggtca ccgtcagatc atgccgtccg gccgagcagc gacaggagtc ggacacccgc
     5521 cggtgcaccg tcgggcggca tgaccgtcgg accgaagtgg cccgagagcg cggctgaacc
     5581 agccaacggc atccagaagt cgaggcaccg ttcggccagg gcctcgggca gcgcgatatc
     5641 ggttccgcac gcccgggcta ggtcccaacc gtggacgagg ttctcggtca cccggaagcc
     5701 gatgatcacc gcgccgggca gctcgcccac cgcgtagggg tgcatggcgt cgagcacacc
     5761 gtcgaccgaa gccgactcga tggctgccag caccgtgccc ctccaggcgg ccatggggtt
     5821 gagtcccagg atcgacgggt cggcttggga ctcccatgcc ccaccgtcgc ggagcacccg
     5881 tgtgaccagc gcctcgccgg tgaccacgtg ggcgaccagc atgcggacgt cccagtcagg
     5941 gcacccagtc tcggccatcc agtccagttc ggttacctcg gcgaggcgtt ctccgaagaa
     6001 ggcgcacgcc gaggtgtagg cggcgagggt gtcagttcgt tcgccgtcgg tcaacgggcc
     6061 cgggctcact cccactcgat ggtgccgggc ggtttggacg tgatgtcgta ggccacccga
     6121 ttgacgccgt cgacctcgtt gatgatgcgg ttggacatct tctcgagcag gtcatagggc
     6181 agtcgggccc agtcggccgt catggcgtcc tcgctggtga ccgctcggat gatgatcggt
     6241 ttggcgtagg tgcgctcgtc gcccatgacg ccgacagacc ggatgtcggg caggactgcg
     6301 aaggcctgcc agatctcgcg ttccagacca gcctcacgaa tctcctcacg gacaatgagg
     6361 tcggcggcct gcagggtggc ggcggtctcc ggtgtgacct cgccgacaat gcgaacgccc
     6421 aggccggggc cgggaaacgg ctggcgccac acgatctcgt cgggcaggcc caactcggaa
     6481 ccgacagctc gcacctcgtc cttgaacagg ttgcggagcg gttcgacgag ggcgaagtcc
     6541 atgtcgtcgg gtaggccgcc cacgttgtgg tggctcttga tcttggctgc gtccttggtg
     6601 cccgattcga tgacgtccgg gtagagcgtg ccctggacga ggaacttcgc atcggtgatg
     6661 ccgctcgagg cgtcctcgaa gatccgtatg aacagttcgc cgatgacctt gcgcttgtcc
     6721 tccgggtcgg tgaccccggc caacttgtca aagaaccggt cggcggcccg cacgtggatg
     6781 agctcgatgc cttgggtctt ctggaaggta tccacgacct gttcgccctc gccggcccgc
     6841 atcaggccgg tgtcgacgaa cacgcaggtc agctgggacc cgatggccct gtgcacgagt
     6901 gccgcggcga ccgctgagtc aaccccgccg gacagtccgc agatggcccg tccggtgcca
     6961 acctgttctc ggatggcgtc caccgacgag tcgatgaccg aggccatcgt ccaatcgcca
     7021 gcacacccgc agacgtcgcg gacgaagcgg gtgagcaggt cctggccaca cggcgtgtgg
     7081 tggacctcgg ggtggaactg gacggcgtac aacccgtcgt cgggggcctc aaaggcggct
     7141 accggggcgt cgggcgacga ggcggtcacc gtggcgccgc ccggcgcgtc ggtgatggcg
     7201 tcgaagtggc tcatccagac cgagtggctg ccggtgccag cgtcgcccag gagcacgccg
     7261 gtgtcggcga cggtcagctc ggtgcggccg tactcgccgt gttcgttgcg acccaccgtg
     7321 ccgccccgct ggtgggcaat gagttgggcg ccgtagcaga tgcccaggat gggcacaccg
     7381 aggtcgtaga cgccgggatc gatccgaggg gcgccgtcga cgtgaaccga ggctgggcca
     7441 ccgctgaaga tgattccggt gggtgcccgc tcggcgaact cggccgccgt caggtcgtgg
     7501 gggacgatct cactgaagac atctgcctca cgaacccttc gggcaatgag ctgggcgtac
     7561 tgggcgccga agtcgacaac caggatgcgg tcggtagcgc gtgcgctccc gccgggggtc
     7621 tcagccatga agtggtgggt cgatccggtt gcgttggtcg gagaagccgg gccgcaggcc
     7681 tagtggccca tccccacgcc ctgggacttc tgaagcgact tgccctcggt catcagcgcc
     7741 ggggcgacca tgacctcggc cttctggaac tccttgacgt cgaggtaacc acaggtagcc
     7801 atcgaggttc ggagcccgcc gaacaggttc aacttgccgt cgttctcgtt ggccggaccg
     7861 aggagaatct cctcgagaga gcctctcgtc gcggtctgga cccgagcgcc gcggggcagc
     7921 gtcgggtgga aggtggccat gccccagtgg tagccgcggc ctggtgcttc cgaagcggca
     7981 gccagaggcg agccgatcat cacggcgtcg gcgccacaca cgatggcctt ggagatgtcg
     8041 ccaccggtgg ccatcccgcc atcggcgatg acgtggcagt aaacgccggt ctcgtcaagg
     8101 tgacgcatgc gggccgcacg gacgtcggca atggccgtgg cctgcgggac gccgaggccc
     8161 agcacaccgc gggtggtgca ggcgtggccg ggacccacgc caaccagcac accagccgca
     8221 ccggtacgca tcaggtggag ggccgctttg ttggtggcac agccgccgac gatgaccggg
     8281 atgtccaact ggcggatgaa cgtcttgagg ttcaacggct cgacggtggt cgacacgtgt
     8341 tcggccgaca cgacggtgcc ttggatgacc agcatgtcca gttcgccggc gagaatgttc
     8401 tcgatcatcc cgtgggtgcg ctgcggggtg accgaggcgc acgacaccac accggcggcg
     8461 ttgatctcgc ggatccgctc ggtgactagg tcagggatga tgggctgctg gtacagctcc
     8521 tgcatccgct tggtggcctt ctcgacgggc tgttcggcaa tctcggcgag gatggagtcg
     8581 gcgtcctcgt agcgggtcca gaggccctca aggttgagca cgcctacgcc acctaggcgg
     8641 ccaatctcaa tagccgtggc cgggctgatg acaccgtcca tggctgaacc cataaggggc
     8701 aggtcgaagc ggtaggcgtc gatctgccag gaaatgtcga cgtcttcggg gtcgcgagtc
     8761 cgacggctgg ggacgattgc gatgtcgtcg aacccatagg cccgtcgacc gctctttccc
     8821 atcccgatcc cgatctcgat ctcggccatg gttgctgcaa ctccctgttg gtgcctgaaa
     8881 gtcaccgtct ccggccggaa ggccttgtga cggcccccgg aaagggtcga ttctagtcac
     8941 gcgcgtccga cgcgaacggc gagaagagcc cgctgttttc gggtttgtca ggctcagcct
     9001 cgacccggcc atcggcgtcg atcaggggcc gtcgaaaacc agggcgtcga ggaggtcggc
     9061 cagttcggtg acgtgctcgg cagtcgtcca ggtaccaccc actgcgactc tcagcgcgta
     9121 ccggtcgtcg aggcgggtgt gggtgaggaa ggcccggccc gaggcgttga cggtggccag
     9181 caggtgctcg gaggcctcgt ctccgtccac gtggcggaag cacaccaagc ccaacgacag
     9241 gggcgccgcc atctccaagc tcgggttgga cgccacccgg tcggctagat cggtcgtggc
     9301 cgccacgtgg gaccggatgt gggctcgcag gccgtccgtc ccgtaggagc gcaacacgaa
     9361 ccagagcttg agggaccgga agcggcgccc gaggggcacc tgccagtccc ggtagtcgat
     9421 cacctcgccg gcatcgctgg ccgcgttgcg gaggtactcg gggacgattg acagcgaatc
     9481 cagcagcgga cccgaatcgg ccacaaagaa cgccgagcag tcgaagttgg tgagcagcca
     9541 cttgtggggg ttgaagcagt aactgtcgac ccggtccagt ccgtccaaca ggtggcggta
     9601 ctcggggcac acggtggccg aaccggccca cgcggcatcc acgtgtaccc acgccccgac
     9661 gggcccggcc acatcgcaga ccctggccac cgggtcgatg gcgcccgacg acgtagtacc
     9721 taccgtggca gcgatgaggc acggcacgag gccctcggcc tcgtcggcgg caaccatggc
     9781 ggccaacgca tcggcatcca tggcgaaccc gacgtcggtg ggcacgaccc gcaactgctc
     9841 acgggcgaag ccggcgacca agatgtcctt ttcaatcgag gagtgggctt gggctgacgt
     9901 gtagacccgc agacgtggca gttcggcagc gccgccggat cggtcgcggg cagccagcac
     9961 ggcacacagc gacgctgacg aggccgagtc ctggatgacg ccgccgcccg gaccgtcgga
    10021 gcggaaccgg tcgggaagcc cgcaggcctc gaccagccaa tccaggacaa gggtctccaa
    10081 ttccgtgcaa gccggactgg tcgaccacat cattccctga acccccaggc cggctgagat
    10141 caactcaccc aggattgatg gcggcgacga gtcggccggg aagaaaccat agaaaccggg
    10201 gtgctgccac tgggtggtag ccgggacgat gagacggtcc acgtcggtca gcagatcggc
    10261 aaatggttcg ccgacggcgg gcggggacga aggcagtgac cggtagacgt ccccaggagc
    10321 cacgtcgggc acgatcggtc ggtcatgccc gccatcgcgg tggtcggcca ggaagtcggc
    10381 caaccagtcg attgcaaccc gtccggcctc ccggaattcg tcgggcgtca tgtgctcggg
    10441 gcccgtcggt tgctcagaag gtcggtcagt catcgctgat tcctctcaac acgggcatca
    10501 cgagtcagca cgataattgc ggtggtcgtc aacgccgagg gcgagcgcca gcagctggcg
    10561 cagcatggct gccgtggcac cccatatcgt gtcgccgacc aactcgaaga acgtgatgat
    10621 ccacggatca ccgtaggtgg accactcctc ctcgcggtac acctcgtcca gcagcagctc
    10681 ggccagcggc acgtggagga tggcctccac ctcatcgggg ttggccacca gatcaggacg
    10741 gccgtcgagg acggccacaa acgggtggat gagactccga ctgcccacgg tgaccagcgg
    10801 gtcgagacga ccgacaagtc ggaccagcga cggatccagc ccgatctcct cctcggcctc
    10861 gcgcaaggcg gtggcccaga ggtccgggtc ggtcggatca tggcggccgc cggggaacga
    10921 gacctcgtgg gtgtggctgg aaaggctggg cgaccgtcgg gtcagtacca cgtggggtcc
    10981 accaccctcg gggtcgtcat agagggcgac cagcacgccg gcttcgcgtt cgtcgccgcg
    11041 gggtcgccct cgaatgccgc cgggttcgcg gccgacgaac acggcaacta ggtggccgag
    11101 ggtcagatgc cggtcgacca gcgcacccca cggcggcgcc tcgcctaggc gccaaccatc
    11161 aggccggggg atctcttggg gtccacccaa tccggtgggc cgcacgacgg cggtcactgc
    11221 tcgatcgggt cggccaggaa cgcctcaagc cccgcgtctc ggaggccttc ggccacctcg
    11281 agggggacaa tggagccacg ctcccagcca tcccagtgaa cggatagggc ggcgaccagc
    11341 tcggctcggg ggtcgtcgtc ctcagcagcc aaggctgcgg cggccaacac ctcggggaag
    11401 cgacccgtct tgaggttggc cagcattcga cccaccaagg tctcaccccg gatccattcc
    11461 gcgaactggc cggccaactt gacggaatcg ggggcgggcc ggtggtcagg caccgttgaa
    11521 tcgtcgaaaa ccaccggatc ggacatggtt gccacggtac cggcgcaccc gactcgccag
    11581 tcagcgggac gggccgaaag tgggttcaaa acgacggaag ccggacccgt gggcccggct
    11641 tccgtgaccc ccggccgaag ccggaggaca atcccgaagg at
//
LOCUS       DASCMR010000247         4947 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001186957, whole genome shotgun sequence.
ACCESSION   DASCMR010000247 DASCMR010000000
VERSION     DASCMR010000247.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4947)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4947)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4947
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001186957"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            1..1770
                     /locus_tag="QGG16_05920"
                     /pseudo
     CDS             1..1770
                     /locus_tag="QGG16_05920"
                     /inference="COORDINATES: protein motif:HMM:NF036305.3"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0004611 - phosphoenolpyruvate
                     carboxykinase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0017076 - purine nucleotide binding
                     [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (GTP)"
     gene            complement(1790..2173)
                     /locus_tag="QGG16_05925"
     CDS             complement(1790..2173)
                     /locus_tag="QGG16_05925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24845.1"
                     /translation="MNTITVLGSLRDLHEGFAWVMVIGNGLAGAWALSAHRVEALRGR
                     SLWWFTALVQVAIAVQVTIGVGLVAGQDIDPPQFHLFYGFVALIVVGIVYSYRQSMRP
                     HRHLLYGFAGLFLMGLGIRAMLVAA"
     gene            complement(2196..3044)
                     /locus_tag="QGG16_05930"
     CDS             complement(2196..3044)
                     /locus_tag="QGG16_05930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIG-L family deacetylase"
                     /protein_id="HJP24846.1"
                     /translation="MSTVVFFHAHPDDEALASGGTMARMADEGHRVVLVVATRGEEGE
                     PVPGVLAEGEALGDRRTSEVHEAASILGVARVSFLDYRDSGMADHPANDHPECFWQAD
                     TESAVDRLEEVLADEEVDVLVVYDSQGGYGHPDHIQVHRVGTRWVEREGTGGRTVRLR
                     WVTMNRDVIRSSIDAAVAAAATAEAAGEEIWSDEAMLELRRERAESDTFGMPDAEITH
                     GVDVTSVLDRKRAAMRAHASQIADDSFFLAMPDEAFAMSFGAEWYVDPGRPRDGGSQS
                     DDLLLK"
     gene            complement(3064..4206)
                     /locus_tag="QGG16_05935"
     CDS             complement(3064..4206)
                     /locus_tag="QGG16_05935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HJP24847.1"
                     /translation="MGALDGVRVIELAGIGPGPFCGMMLADMGADVVRIDRAGSVRGG
                     DPAKPPANVNARGRRSIGVDLKSDEGRELVLRMVADADVVFEGFRPGVAERLGLGPDD
                     CLTRNPAIVYGRMTGWGQDGPYAQTAGHDINYIALAGALAHMGRDDSGPVPPLNLVGD
                     FGGGGMYLAFGIVCALLSARSTGEGQVVDAAMVDGVASLMGFFYGMLHTGFATENRGE
                     NMLDTGAHFYDVYECADGEYISVGSIEPQFYAELIDKLGLDAEDFANQHDRSRWPELK
                     AKVAAVVATRTRDEWDAVLEGSDVCYAPVLTVSEAIGHPHHLARGTFVESGGLMQPGP
                     APRLSGTPGSIRRPPPHEGQHTEELLVELGLGADEVAALRAAGAIA"
     gene            complement(4290..>4947)
                     /locus_tag="QGG16_05940"
     CDS             complement(4290..>4947)
                     /locus_tag="QGG16_05940"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJP24848.1"
                     /translation="TIFGADGPPCGKPYDLGDMADDAVGLLDHLGLADAHMVGFSLGG
                     MVAQTVAAEHPDRCRSLISMGSSTGNREFGRPAEATLAAMLVPSPADPAEAIEKQLAD
                     RRLWASVWHDDDHARSVFADYQQRSPQPQHAHDRQRGAAMLSGDRERQLAGITVPTRV
                     VHGSADTLIPAAAGERTAEVIPGAAFVLLEGWGHDMAPGAWPIIVTAIADHCHVVDRT
                     "
BASE COUNT          811 a         1707 c         1625 g          804 t
ORIGIN      
        1 attgcatggg tcgaggactg ggtccagctg ctggctcccg acgccgtcca ctggtgtgac
       61 ggttcgaccg acgaagccga ccgtctctgt ggcgagctcg tcgagacagg caccttccgt
      121 cgactgaacg acgacctccg cccgaactcc tacctggcgc tttccgatcc cggcgatgtg
      181 gcccgggtcg aggaccgcac ctacatctcg acagtcaacc cggtcgacgc cggaccgacc
      241 aacaactggc gggacccgtc gacgctcaag accgagatga gcgagctcta ccggggatgc
      301 atgcgggggc ggaccctcta ggtcgtcccg ttctcgatgg gtccgctggg atcgcccatc
      361 gcccacatcg gggtgcagct caccgactcg ccctacgtag tggtcagcat gcgaaccatg
      421 acccgcatgg gatcagccgt cctcgacgtg ctgggcgacg acgacttcgt tccctgcgtg
      481 cactcggtgg gcgccccgct cgaggccgga caagccgacg tgccgtggcc gtgcaatgcc
      541 gacaacaagt acatctcaca cttccccgag acccgggaga tctggtccta cgggtccggc
      601 tacggcggta acgccctgct gggcaagaag tgcttcgccc ttcggattgc ctcgaccatg
      661 gcccgcaacg acggctggct ggccgagcac atgctgatcc tgggcctgac gtcgcccgct
      721 ggcgagaaga cctacgtggc cgcagcgttc ccttcagcgt gcggcaagac caacatggcc
      781 atgctggttc ctacgcagcc cggctggacc gtcgagacca tcggcgacga catcgcgtgg
      841 atgaagttcg gcgacgatgg acgcctgtac gccatcaacc cggaggccgg cttcttcggc
      901 gtggcccccg gcacctcaga tgccaccaac gccaacgcca tggccaccct gtggggcaac
      961 tcggtgttca ccaacgtggc cctcacgcct gacggcgacg tctggtggga gaagatgacc
     1021 gacgaggtgc cgggccagtt gaccgattgg cagggccagc cctggacgcc cgagtcagat
     1081 gggccggccg cccacccgaa tgcccggttc accacccccg cctcgcagtg cccgtcgatc
     1141 gcccccgagt gggaggaccc ggccggcgtg cccatctcgg ccatcctgtt cggtggacgg
     1201 cgggccacca acgtgccgtt ggtgaccgag gctcgcgact gggaccacgg cgtcttcctc
     1261 ggctcgatca tgagttcgga gaagaccgct gcggctgccg gcaccatcgg tcaggtccgg
     1321 ttcgacccct tcgccatgct cccgttcatc ggctacaacg tcggcgacta cttcgcccac
     1381 tggctgtcgg tcggtgatca ggccgaaccg tcgctcctcc cgaagatgtt ctgggtgaac
     1441 tggttccgca aagacgccga cggtcgcttc ctgtggcccg gctttggtga gaacagtcgg
     1501 gtgctcgagt ggatcgtcga ccgggtgtcg ggccgagccg aagccgtcga ggcccccatc
     1561 ggtctggtgc ccacggttga cgccatcgac cgaaccggcc tagatctgga cgacgaaacg
     1621 atggccggtc tgctgaccgt gaatccgtcg tcatggagcc acgaggtggc cctcatcgac
     1681 gagcactact cgatgatcgg cgaccggctc cccaagcgtc tcgaggctga actggacgac
     1741 ctccgtagcc gcctcgacgc cgcccgctag tgacgggttc gatctgccgt caggcggcaa
     1801 ccagcatggc gcggatgccc agccccatga gaaacaggcc ggcaaacccg tagagcaggt
     1861 gccggtgcgg ccgcatgctc tggcggtagc tgtagacgat gcccacgacg atgagggcca
     1921 cgaatccgta gaagaggtgg aactgtggcg ggtcgatgtc ctgaccggcc accaatccca
     1981 ccccgatggt cacctgcacg gcaatggcca cctgcaccag cgcggtgaac caccagagcg
     2041 atcggcctcg tagtgcctct acccggtggg ccgacagcgc ccacgctcca gccaggccgt
     2101 tgccgatcac catcacccag gcgaatccct cgtggaggtc tcgcagggaa cccagcaccg
     2161 tgatcgtgtt catcggctaa tcatgccagc agccgtcatt tgagcaacag gtcatcgctc
     2221 tgcgaaccgc catcacgagg gcggcccgga tcgacgtacc actcggctcc gaagctcatg
     2281 gcaaacgcct cgtcgggcat ggccaagaag aacgagtcgt cggcgatctg actggcgtgg
     2341 gcccgcatgg cggcacgctt gcgatccaga accgaggtga cgtcgacgcc gtgggtgatc
     2401 tcggcatcgg gcataccgaa ggtgtcggac tcggcccgct cgcgacggag ttccagcatt
     2461 gcctcgtcgg accagatctc ctcgccggct gcctctgcgg ttgcagccgc cgctaccgcg
     2521 gcgtcgatcg acgaccggat gacgtcccgg ttcatggtca cccagcggag tcgtactgtt
     2581 cgaccgccgg tgccctcccg ctcgacccag cgggttccca ccctgtggac ctggatgtgg
     2641 tcggggtggc cgtacccgcc ctgggagtcg tagacgacca agacgtcgac ctcttcgtcg
     2701 gcaagcacct cttcgagccg atctacagcc gactcggtgt cggcctgcca gaagcactcg
     2761 gggtggtcgt tggctggatg gtcggccata ccgctgtccc ggtagtcgag gaaggagacc
     2821 cgggccacgc ccagaatcga cgccgcctcg tggacctccg atgttcggcg atcccccagc
     2881 gcctcgcctt cggccagcac accgggcacc ggctcgccct cttcgccacg ggtggccacc
     2941 acgaggacca ctcggtggcc ctcgtcggcc atacgggcca tggtcccgcc cgaggccaac
     3001 gcctcgtcgt caggatgggc atggaagaag acgacggtcg acataattca gaatcccttc
     3061 cgttcaggcg atggcgcccg cggcccgcag ggcggccacc tcgtcggcac ctaagccaag
     3121 ctcgaccagg agttcctcgg tgtgctggcc ctcgtggggc ggtgggcgcc ggatcgaacc
     3181 gggggtgccg ctgaggcgcg gggcggggcc gggctgcatg agcccacccg actccacgaa
     3241 ggttccccgg gccaggtggt ggggatgacc aatggcttcg gacaccgtca gcaccggggc
     3301 gtagcagacg tcgctgccct ccagcacggc gtcccactcg tcacgggtgc gggtggccac
     3361 cacggcggcc accttggcct ttagctccgg ccaccgcgac cggtcgtgct ggttggcgaa
     3421 gtcctcggcg tcaaggccca gcttgtcgat cagttcggca tagaactgcg gttcgatcga
     3481 gccgacggag atgtactccc cgtcggcgca ctcgtacacg tcgtagaagt gggccccggt
     3541 gtcgagcatg ttctcgcccc ggttttcggt ggcgaagccg gtgtggagca tcccgtagaa
     3601 gaaacccatg aggctggcta ccccatcgac catggcggcg tcgacaacct gcccctcgcc
     3661 ggtggaccgg gccgaaagga gggcgcacac gatgccgaag gccaggtaca tgccgccacc
     3721 gccgaagtcg ccgaccaggt tgagcggtgg caccggccct gaatcgtcac ggcccatgtg
     3781 ggccagcgct ccagccaggg cgatgtagtt gatgtcgtgc ccggcggtct gggcgtacgg
     3841 gccgtcctgg ccccagccgg tcattcgccc gtagacgatg gccgggttgc gggtcagaca
     3901 gtcgtcggga cccaggccca ggcgttcggc caccccgggg cgaaagccct cgaacaccac
     3961 gtcggcgtcg gccaccatcc gcaacaccaa ctcgcggccc tcatcggact tgaggtcgac
     4021 accgatactc cggcgaccgc gggcgttgac gttggccggc ggcttcgccg gatcgccgcc
     4081 acggaccgaa ccggcccggt cgatgcggac gacgtcggct cccatgtcgg ccaacatcat
     4141 tccgcagaac ggtccgggcc cgatgccggc cagttcgatg acccggactc cgtccagtgc
     4201 gcccatgtcg tactcccgtt tctggttcga ttgtctgatt cgagttgctg gttcgtcgct
     4261 gcggttcaga tcctgtgcgc ggctgaggct caggtccggt ccacgacgtg gcagtggtcg
     4321 gcaatggccg tgacgatgat cggccaggca ccgggcgcca tgtcatgtcc ccaaccttcg
     4381 agcagcacga acgccgcacc ggggatgacc tcggcggtgc gctcaccggc tgcagcgggg
     4441 atgagggtgt cggccgaccc gtggaccacc cgggtgggca cggtaattcc agccaactgc
     4501 cgctcccggt cacccgagag catcgcagcg ccgcgctgtc ggtcatgggc gtgctgcggt
     4561 tggggcgagc gctgctggta gtcggcgaac accgaccggg cgtggtcatc gtcgtgccac
     4621 acgctggccc atagtcgacg gtcggccaac tgcttttcga tcgcttcagc tggatcggcc
     4681 ggcgacggca cgagcatggc agccagcgtg gcttcggcgg ggcgtccgaa ctcccgattg
     4741 ccggtggacg agcccatgga gatgaggctc cggcaccggt cgggatgctc ggcggccacg
     4801 gtctgggcaa ccattccgcc tagcgaaaac ccgaccatgt gggcgtcggc caggcccagg
     4861 tgatcgagca ggcccaccgc gtcgtccgcc atgtcgccca ggtcatacgg cttgccgcag
     4921 ggaggaccgt cggcgccgaa gatggtc
//
LOCUS       DASCMR010000248         6629 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001187767, whole genome shotgun sequence.
ACCESSION   DASCMR010000248 DASCMR010000000
VERSION     DASCMR010000248.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 6629)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6629)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6629
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001187767"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..369)
                     /locus_tag="QGG16_05945"
     CDS             complement(<1..369)
                     /locus_tag="QGG16_05945"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24849.1"
                     /translation="MSDPMVDPLSGPMDSGPDPVPLAAEPAAATPDPYRPPQIEAILR
                     QLREVVANARPMPLSASSMVNKDELLALLDEAAARLPEELRAARWLLKEREEFLGKVR
                     REGDEILELARTRAERLVQRT"
     gene            complement(366..845)
                     /gene="coaD"
                     /locus_tag="QGG16_05950"
     CDS             complement(366..845)
                     /gene="coaD"
                     /locus_tag="QGG16_05950"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HJP24850.1"
                     /translation="MTRVLYPGSFDPVHNGHVEMVETAAGLFDEVVVATLTNPSKGGG
                     LFDLEERMALLDECFEHLTNVRTTMFDGLVVNLATEVGAHFIIKGLRAVSDFESELQM
                     AQMNAEISGVQTLFLPTASRRSFLASRLIREVARLGGDVSDMVPDPVRLRLESRLDR"
     gene            complement(895..1479)
                     /gene="rsmD"
                     /locus_tag="QGG16_05955"
     CDS             complement(895..1479)
                     /gene="rsmD"
                     /locus_tag="QGG16_05955"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: protein motif:HMM:NF015559.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HJP24851.1"
                     /translation="MRVVAGTARGRRLVAPDGGASDGRRGGSTVRPTTDRVRESMFNA
                     LHSRGAVVDARVLDLFAGTGALGIEALSRGAAHATFVEQAWDAVELVEVNLDTCDLST
                     RATVVRADGLGWLATGLGGAAGPWDLVLLDPPYDFDGWTDLLESLIELVAADGVVAVE
                     SDREIDAGPRWNVDSHRRTAGTVVMLLRPESDPA"
     gene            1571..1759
                     /locus_tag="QGG16_05960"
     CDS             1571..1759
                     /locus_tag="QGG16_05960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24852.1"
                     /translation="MRAPETIICVDCGGTCHLLPHPETEFEPGDPVAYRCADCMDRWD
                     LVTPDDGDEGRGDEPPTI"
     gene            complement(1827..2468)
                     /locus_tag="QGG16_05965"
     CDS             complement(1827..2468)
                     /locus_tag="QGG16_05965"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF025054.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HJP24853.1"
                     /translation="MPEGRRPPIATRVGGDDDVPVVVATLAEAFASDPVLSFLLDEGP
                     DHEPGRHMALVTALFANRLLGGRGVDEIVVPADPVDAREAAAVWVPPRGPDDPGPDYS
                     AVGMVNQMALGEEEMARRLEAMMPMLGASPATPHWYLAFVGTRAASRGRGLASALISA
                     VTRRCDADGVGAYLESSNPANVPLYRHHGFVVTGEAVIAGGPTVPLMWRDPLH"
     gene            complement(2499..4655)
                     /gene="recG"
                     /locus_tag="QGG16_05970"
     CDS             complement(2499..4655)
                     /gene="recG"
                     /locus_tag="QGG16_05970"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HJP24854.1"
                     /translation="MADPTPMDGGITLRELANRSVTDLNGVGEVKAKALADVGVGSIL
                     DLLGFYPRRYLDRSREATVAQLEPGSEGMVLVRIDRVVARRTRKGRSLVEVRASDETG
                     RLRLTFFNQPWRERQLQEGMQAVVFGKADDYQGTLQMVGPVVDLIGDRTGRIVAVYPQ
                     SETAGLHSWDVDSFVGEALRRTMAVRGLSDPVPRRVRDSFRFMDRSDAYRAIHRPESM
                     AEMAEARRRLVFDELLRIQMALVRRKLELERTSVGIAHPAGPVDGGTDVVAEFHDRLG
                     FELTGAQHRTIDEIAGDLSRPVPMHRLLQGDVGSGKTVVAVTALLTAVRGGRQGAFMA
                     PTEVLAEQHHLGVAELLDGMTVPDPATLLGHRPLKVDLLTNRTTAAERRRIASQLVAG
                     GVDVLIGTHALIQEGVEFGSLGVVVIDEQHRFGVEQRAALREKNRDGTAPDVLVMTAT
                     PIPRTAAMTVYGDLDVSVLDEMPPGRTPIDTAWVVEEEEVWQAVRDEVAAGRQAYVVC
                     PLIDESDALQVRSAEEAFAELSTEVLSDLRIGLLHGRVTRADKEETMRLFRFGELDVL
                     VATTVIEVGVDVPNATVMVVLDAARFGIAQLHQLRGRVGRGAHISRCFLVGEAPTPDA
                     EERLKAIVRTTDGFELAEVDLDLRGEGTIMGERQKGRNDLRLASLRRDREWVEAAREV
                     ALSLVADGSGPEAHPELADEVDLFLGADESAFLLKS"
     gene            complement(4667..6346)
                     /locus_tag="QGG16_05975"
     CDS             complement(4667..6346)
                     /locus_tag="QGG16_05975"
                     /inference="COORDINATES: protein motif:HMM:TIGR03599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DAK2 domain-containing protein"
                     /protein_id="HJP24855.1"
                     /translation="MTVSSLDAAGLRALMGTFRDALVGHRATLNLLNVYPVPDGDTGS
                     NMTMTVDSVCADLDALDGDADMDAVASAIAHGSLMGARGNSGVILSQVLRGLSAVFSP
                     AGAQDPQSGAIDGRLLADGLAAASAAAYRAVMTPVEGTILTVVRESSEAALVAADAGA
                     DLLGTAEAARVAGGESLARTPELLPVLAEAGVVDAGGSGFLLLLDAALTTIDGRPLPE
                     PAEVKAPLLAGDRPDAHQSGAGADLGTQYEVMYFLDAPDDSVDGFKAAWAALGDSIVV
                     VGGDGVWNCHVHTDDIGGAIEAGIAAGRPYRIRVTDLFDEVREQVEEQAWVRDSMAAD
                     SGDVGEPVPCAVVAVANGPGIRDIFRSLGVRRVVLGGQSMNPSTADLLAAVEAAPADA
                     VVLLPNNGNIIAVAAQVDAQTDKSVRVVPTRGITEGFASLLEYDPQGTADDNLTSMAA
                     AADAVVAGEVTVAVRDSGSDVGDIAEGDHLGLTDGKVRVVADTSFGVTTGLLEAMISD
                     EHEIVTIIAGEDADEATTAAVVAWLSDEHPDVDVEVHDGGQPLYPYYLGVE"
     gene            6555..>6629
                     /locus_tag="QGG16_05980"
     CDS             6555..>6629
                     /locus_tag="QGG16_05980"
                     /inference="COORDINATES: protein motif:HMM:NF013026.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L28 family ribosomal protein"
                     /protein_id="HJP24856.1"
                     /translation="MASVCEICGKKPWFGKSLSHSHRRT"
BASE COUNT         1114 a         2364 c         2146 g         1005 t
ORIGIN      
        1 ggtgcgctgg acgagacgct cagcccgggt gcgcgccaat tccaggatct cgtcgccctc
       61 acgccgtacc ttgcccagaa actcctcgcg ctccttgagt agccacctgg ccgcacgcaa
      121 ctcctccgga agtcgtgccg ccgcctcgtc gaggagtgcg aggagttcgt ctttgttgac
      181 catcgacgac gccgacaacg gcatgggccg ggcgttggcc accacctcac gcaactggcg
      241 caggatggct tcgatctgtg gcggccgata cgggtcagga gtcgcggccg ccggctcggc
      301 ggccagcgga accggatccg ggccgctgtc catggggccg gacaggggat caaccatcgg
      361 gtcgctcacc tgtcgagccg gctctcgagc cggagccgga ccgggtccgg caccatgtca
      421 ctcacgtcac cgccgagacg ggccacctcg cgaatgaggc gtgaagccag aaacgaacga
      481 cgggatgcgg tgggcaggaa gagcgtctgc accccggaga tctcggcatt catctgggcc
      541 atctggagtt cactctcaaa gtccgatacg gcacgcaatc ccttgatgat gaagtgggcc
      601 cccacctcgg tggcaaggtt caccaccaaa ccgtcgaaca tcgttgtccg gacgttggtc
      661 aggtgctcga agcactcgtc gagcagcgcc atccgctcct cgaggtcgaa caggcctcca
      721 cctttggacg ggttggtgag ggtggccacc accacctcgt cgaacagccc ggcagctgtc
      781 tcgaccatct caacatgccc gttgtggacg gggtcaaacg aaccgggata cagcactcgg
      841 gtcacgagtt ggccacctct ccccaatctt ggaaatcgtt ccgtcgaccg tgactcaagc
      901 cggatccgac tccggccgga gcagcatcac cacggtaccc gcggtacggc ggtgcgaatc
      961 gacattccaa cggggaccgg catcgatctc acgatccgat tccacggcga ccactccgtc
     1021 tgcagccacc agttcgatca gggactccag gaggtcagtc caaccgtcga agtcgtacgg
     1081 cgggtcgagc agcacgaggt cccatggtcc ggctgcgccg ccgaggcccg tggccagcca
     1141 cccgaggcca tcggcacgga ccacggtggc ccgggtggac agatcgcagg tgtcgaggtt
     1201 gacctccacg agttccaccg catcccatgc ctgctctacg aacgtggcgt gcgcagcgcc
     1261 acgagacagg gcctcgattc ccagcgctcc ggttccagcg aacaggtcga ggacccgtgc
     1321 gtcgaccacg gcgccgcggc tgtgcagtgc gttgaacatg gactcgcgga cccggtcggt
     1381 cgtggggcgc accgtcgagc cgccacgccg gccgtccgag gctccgccat ccggggcgac
     1441 caaccggcgg ccacgggcag ttccggcaac gacgcgcacg cgttcatctt gtcaggcccg
     1501 ccgtaccaga gtccgtcgcg gcaagcccca tgacggcaga cccaaatccc ccaaacgcta
     1561 ggttcggccc gtgcgggcac ccgagaccat catctgcgtc gactgtgggg ggacctgtca
     1621 tctcctcccc cacccggaga ccgagttcga gccgggcgac ccggttgcct accgatgtgc
     1681 cgactgtatg gaccgttggg acctggtgac accggatgac ggcgacgagg gccgaggcga
     1741 cgaaccgcca accatctgac cgattccttc ggtgggccac acgccggccc tcacgtcatg
     1801 ccacccgccg aacagttccg gggtgttcag tgcagtggat ccctccacat gagcgggacg
     1861 gtggggccgc cggcgatgac cgcctcaccg gtcaccacga atccgtggtg cctatacagg
     1921 ggcacgttgg ccggattgga cgactcgagg taggcgccca ccccgtcggc atcgcagcgc
     1981 cgggtgaccg ccgagatcag cgctgaggcc aggccacgcc cacgtgacgc cgctcgggtg
     2041 cccacgaagg ccagatacca gtgaggcgta gccggcgagg cgcccagcat cggcatcatg
     2101 gcctccagac gccgggccat ctcctcctcg cccagagcca tctggttcac catgccgacc
     2161 gccgaatagt cgggccccgg gtcgtcgggg ccgcggggcg gcacccacac ggcggccgcc
     2221 tcccgtgcgt cgaccggatc ggcgggtacc acgatctcgt cgactccccg gccgcctagc
     2281 agtcggttgg cgaacagcgc ggtgaccagc gccatgtgtc gacccggttc gtggtccggc
     2341 ccctcgtcga gaaggaacga cagcaccggg tcagaagcaa aggcctcggc cagggtggcc
     2401 accaccacgg ggacgtcgtc gtctcccccg actcgtgtag cgatgggcgg tcggcgacct
     2461 tcaggcatgt ccgatcctgc cccaccagcg accccaggtc atgacttcag gaggaatgcc
     2521 gactcgtcgg ccccgaggaa taggtcgacc tcgtcggcca gttcggggtg ggcctccggc
     2581 cccgagccgt cggccaccag ggaaagcgcc acctcgcggg ccgcttccac ccactcgcgg
     2641 tcccgccgga gcgaggccaa gcgaaggtcg ttgcggccct tctgacgctc ccccatgatc
     2701 gtgccctcgc cccggagatc caggtcgact tcggccagct cgaacccgtc ggtggtgcgg
     2761 acaatggcct tcagccgctc ctcggcgtcc ggcgtgggtg cttcgccaac caggaagcaa
     2821 cggctgatat gtgcgcctcg acctacccga cctcggagtt ggtggagttg ggcaatgccg
     2881 aatcgggccg cgtcgagcac caccatgacc gtggcgttgg gaacgtcgac acccacctcg
     2941 atgaccgtgg tggccaccag cacgtcgagt tccccaaacc ggaagagacg catcgtctcc
     3001 tccttgtcgg ctcgggtcac ccgcccatgg agcaacccga tccgcaggtc ggacaggacc
     3061 tcggtcgaca gctcggcgaa cgcctcctcg gccgaccgca cctggagggc atcggactcg
     3121 tcgatgagcg gacacacgac gtaggcctga cggccggcgg ccacctcgtc gcggacggcc
     3181 tgccagacct cctcctcctc gaccacccac gcggtgtcga tcggggtccg tcccggcggc
     3241 atctcatcga gtaccgagac gtcgagatct ccgtagacgg tcatggccgc ggtgcgcgga
     3301 atgggggtag ccgtcatcac caggacgtcg ggagccgtgc cgtctcggtt cttctcccgg
     3361 agggccgccc gctgctccac accgaaccgg tgctgctcgt cgatcaccac cacgccgagc
     3421 gagccgaact ccaccccctc ctggatcagg gcgtgggtgc cgatcaggac gtcaacacca
     3481 cctgccacca actgggaggc gatccggcgc cgttcggcgg cggtggtccg attggtgagg
     3541 aggtcgacct tcaacggtcg gtgtcccaac aaggtcgccg gatcgggaac ggtcatgccg
     3601 tccagcagtt cggccacccc aaggtggtgc tgctcggcca gcacctcagt gggtgccatg
     3661 aacgcgccct ggcggccacc tcgcaccgcg gtcaacaggg cggtcaccgc caccactgtc
     3721 ttgcctgacc ccacgtcacc ctgcaggaga cgatgcatgg gcaccgggcg ggataggtcg
     3781 ccggcgatct catcgatcgt gcggtgctgc gccccggtca gttcgaagcc caggcggtca
     3841 tgaaactcgg ccaccacgtc ggtgccacca tccactgggc cggcggggtg ggcaataccc
     3901 accgacgtcc gctccagctc cagcttgcgg cggaccaggg ccatctggat tcgcagcagc
     3961 tcgtcgaaca ccagacggcg gcgggcctcg gccatctccg ccatcgactc ggggcgatga
     4021 atggcccggt aggcatcgga ccggtccatg aatcggaagc tgtcacgcac ccttcgggga
     4081 accgggtccg acaagccgcg gacggccatg gtccgacgca gagcctcgcc tacgaaggag
     4141 tcgacgtccc aactgtggag gccggcggtc tcggactgcg ggtagacggc gacgatccgg
     4201 cccgtccggt caccgatcag gtcgacgacc gggcccacca tctgcagggt gccctggtag
     4261 tcgtcggcct tgccgaacac cacggcctgc atcccctcct gcagctggcg ttcccgccag
     4321 ggctggttga agaaggtcag ccggagacga cccgtctcgt ccgacgcccg tacttcgacg
     4381 agggaccgac ccttccgggt ccgccgtgcg acgacccggt cgatacgaac cagcaccatg
     4441 ccttcggacc ccggctcgag ttgggccacg gtcgcctcgc ggctgcggtc caggtaccga
     4501 cgtggataga agccgagcag gtcgaggatc gatccgaccc cgacgtccgc cagggccttc
     4561 gccttcacct cacctacacc gttcaggtcg gtgaccgacc ggttggccag ttcccggagg
     4621 gtgatgcccc cgtccatggg agttgggtcg gccacggtcc cccgggctac tcgacgccca
     4681 ggtagtacgg gtacagcggc tggccgccgt catgtacctc gacgtcaacg tcgggatgct
     4741 cgtcactcag ccaggcgacc acggccgccg tcgtggcttc gtcggcatcc tcaccggcga
     4801 tgattgtcac gatctcgtgc tcgtcggaga tcatcgcctc gagcaggccg gtggtgacgc
     4861 cgaacgacgt atcggcgacc actcggacct tcccgtcggt caatccgagg tggtcgccct
     4921 cagcgatgtc gcccacgtcg ctgcccgagt cacgcaccgc cacggtcacc tcgccggcca
     4981 ccacggcgtc ggccgccgcg gccatcgaag tcagattgtc gtccgccgtc ccctgcgggt
     5041 cgtactccag caacgaggcg aagccctcgg tgatcccccg ggtcggcacc acgcggaccg
     5101 acttgtcggt ctgggcgtcg acctgggcgg ccaccgcgat gatgtttccg ttgttgggga
     5161 gcagtaccac cgcgtcggct ggcgcggcct ccacagcggc cagcaggtcg gcggtagacg
     5221 ggttcatgga ctgtccgccg aggaccaccc gacgcacccc gagagaccgg aagatgtcgc
     5281 ggatgcccgg gccgttggcc accgcgacta cggcgcaggg aacaggttcg ccgacgtctc
     5341 cgctgtcagc ggccatcgag tcccgcaccc aggcctgctc ttcaacctgt tcgcggacct
     5401 cgtcgaacag gtcggtgact cggatgcggt aagggcggcc ggcggcgata cccgcctcga
     5461 tcgccccacc gatgtcgtcg gtgtggacgt ggcagttcca gacgccgtcg ccacccacca
     5521 cgacaatgga gtcgccgagc gcggcccacg ccgccttgaa accgtccact gagtcgtccg
     5581 gtgcatccag gaagtacatg acctcgtact gcgttccgag atcggcgccg gccccgctct
     5641 ggtgggcatc gggacggtcg ccagccagca acggcgcctt gacctctgcc ggttccggca
     5701 gcggtcgtcc gtcaatggtc gtaagcgctg catccagcag gagcaggaac ccgcttcccc
     5761 cggcgtcgac cacgcccgct tcggccagca ccggaagtag ttcaggcgtc cgggccaggc
     5821 tctcgccccc agcgacacga gccgcttcgg cagtacccag gaggtccgct ccggcatcgg
     5881 cggcgaccag ggccgcttcg gaagactcac gaaccaccgt caggatcgtt ccctcgaccg
     5941 gtgtcatgac tgccctgtaa gccgcggccg acgcggcggc caggccgtcg gccaacaggc
     6001 gtccatcgat ggccccggac tggggatctt gagcccctgc cggcgagaag accgccgaca
     6061 gtccacggag cacctgggaa aggatcacac cggagtttcc gcgggccccc attaacgagc
     6121 cgtgggcaat ggcggaggcc accgcgtcca tgtcggcgtc gccgtcgagg gcgtcgaggt
     6181 cggcgcacac tgaatcgacg gtcatcgtca tgttcgaacc cgtgtcgccg tccggcaccg
     6241 gatagacgtt caggaggttg agggtcgccc ggtggccgac cagggcatca cgaaaggtgc
     6301 ccatgagggc gcgcaagccg gcggcgtcca acgaggagac ggtcacggtg gacgagcgta
     6361 gccatcgccg acccactgcc cccggaacgg gactcggcga gccgacaagc caggtacgcc
     6421 ggcgtgaccg acaacgcagc gcctcgggtg gatctcggtc acccgcggtt ggagaccccc
     6481 catgggccgc cctagccttg tgacgttgtc gagatcggtc caaaaccgac cggttcccct
     6541 atcgaggtgt tgtgatggcg tccgtctgtg aaatctgcgg caagaagccc tggttcggca
     6601 agtccctgag ccactcccac cggcggacc
//
LOCUS       DASCMR010000249         2428 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001197022, whole genome shotgun sequence.
ACCESSION   DASCMR010000249 DASCMR010000000
VERSION     DASCMR010000249.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2428)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2428)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2428
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001197022"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..880)
                     /locus_tag="QGG16_05985"
     CDS             complement(<1..880)
                     /locus_tag="QGG16_05985"
                     /inference="COORDINATES: protein motif:HMM:NF013705.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HJP24857.1"
                     /translation="MTAQREWFEKDFYASLGVSKEASAKEITKAYRKLARQLHPDANP
                     GDATSEARFKEVSAAYDVVGDESRRAEYDQIRQMGPMGGFGPGPGGGMGGGFPGTGGM
                     GGFDLGDLFGGAFNGGRGSGRGQRGADLETRLTLSFTEAVNGVTTSVHLVSDTVCSTC
                     SGSGARPGTRPTACGACRGRGVQAEDQGPFSFSRPCGQCGGRGSQIDDPCGSCQASGV
                     ERRPREVKVRIPAGVDEGQRIRLKRRGEPGRGGPDGDLFIVVAVEPDIRFGRRGRHLT
                     VSVPVTYPQAVLGSEIE"
     gene            complement(919..1560)
                     /locus_tag="QGG16_05990"
     CDS             complement(919..1560)
                     /locus_tag="QGG16_05990"
                     /inference="COORDINATES: protein motif:HMM:NF013212.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HJP24858.1"
                     /translation="MSGDGASSESQSPDDVHDGFPSTDPSTEISGSVSDAPPTGEVDN
                     TVDSTASDEIPVEGLPVDEAEGTGDPVLELMAVLEAERDGYLSDLQRVTAEFANYRKQ
                     ADRRTTEVGGRARGDLAEKLLVVFDACDLALEHGADDVAPIRASLVQALEPVGLEVLD
                     PVDEPFDPNRHDAVLHEPAADGDDAGQVVIEVLRRGYAWEGRVLRPAMVRVRG"
     gene            complement(1557..>2428)
                     /locus_tag="QGG16_05995"
     CDS             complement(1557..>2428)
                     /locus_tag="QGG16_05995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140662 - ATP-dependent protein folding
                     chaperone [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Hsp70 family protein"
                     /protein_id="HJP24859.1"
                     /translation="PAVVDLAKEIAGRDPSKNVNPDEVVAIGAAVQAGVLVGEVKDVL
                     LLDVTPLSLGIETKGGVMTRLIERNTTIPIQRSEVFTTAEDGQPSVEIHVLQGEREMS
                     QFNKTLGKFQLVDLPPAPRGTPQIEVTFDIDANGIVHVSAKDRATDNEQSMTITGQSS
                     LDKDVIDQMVRDAESHADEDQKRKAEAEVRNNADNLVYQTDKLLADQGDQLTEDETTN
                     VTEKLEGLKKALGEDDVEAIGSATEALMAASQEFGQRLYEAAQADSDAAGASGSADGS
                     DDDVVDAEIVDES"
BASE COUNT          388 a          842 c          763 g          435 t
ORIGIN      
        1 cctcaatctc ggaacccaga accgcctggg ggtaggtcac cggaacagac accgtgaggt
       61 gtcgccctcg ccgaccgaac cggatatcgg gttcgacggc caccacgatg aacaggtcgc
      121 catcgggtcc gcctcgaccc ggctcgccgc gcctcttcag gcgaatgcgt tgtccctcgt
      181 cgacgccggc ggggatccgg accttgacct cccgggggcg tcgctcgacc ccactcgctt
      241 ggcacgaccc acacgggtcg tcgatctggc taccccgacc accgcattgg ccacagggcc
      301 ggctgaacga gaacgggccc tgatcctcgg cctggacgcc gcggccgcga caggccccac
      361 aggccgtcgg ccgggttcct gggcgggcgc cgcttcccga acaggtgctg caaaccgtgt
      421 cgctgaccaa atgaaccgag gtggtgacgc cattgaccgc ttcggtaaac gaaagagtga
      481 ggcgggtctc gaggtcggcg ccgcgctggc cccggccgct acctcggcca ccgttgaacg
      541 cgccaccgaa caggtcgccc aggtcaaatc cgcccatgcc accagtacct gggaatccac
      601 cccccatgcc tccgcccggg ccggggccga atccacccat gggacccatc tgccggatct
      661 ggtcgtactc ggcccggcga gactcgtcgc ccacaacgtc gtaggcggcc gagacctcct
      721 tgaaccgggc ctctgaggtc gcgtcacccg gattggcgtc ggggtgcaac tggcgggcca
      781 atttccggta ggccttggtg atctccttgg ccgacgcctc cttcgagacg cctagcgagg
      841 cgtagaagtc cttctcgaac cactcgcgct gggcggtcat cgggtgggct cctcgtccgg
      901 ttcggttcgg atcgcggctc agccgcgcac gcggaccatg gccgggcgca gcacgcgtcc
      961 ttcccacgca tagccgcgcc gcaggacctc gatgactacc tgtccggcat catctccatc
     1021 ggcggccggc tcgtggagca cggcatcgtg tcggttgggg tcgaacggct catcgaccgg
     1081 atcgagcact tcgagtccga caggctccaa ggcctggacc agcgacgccc ggatgggggc
     1141 cacatcgtca gcgccgtgtt caagggccag atcgcaggcg tcgaacacga ccagaagctt
     1201 ctcggccaga tcaccacggg cccgaccacc cacctcggtg gtgcgacggt cggcctgctt
     1261 tcggtagttg gcgaactcgg ctgtcacccg ttggaggtcc gacaggtacc cgtcccgctc
     1321 agcttccaga acagccatca attctagaac cgggtcaccg gtcccctcgg cctcgtccac
     1381 cggtagaccc tcaaccggga tctcatcgga agctgtcgaa tcgacggtgt tgtcgacctc
     1441 tccggtcggc ggagcgtcgg acactgaccc ggagatctct gtcgaagggt ctgtggacgg
     1501 gaatccgtcg tgcacgtcat cgggtgactg gctttccgag gacgcgccgt caccgctcat
     1561 gactcgtcga cgatctccgc gtcaaccacg tcgtcgtcgg atccgtcggc agacccgctc
     1621 gcgccggccg catccgaatc ggcctgggcg gcctcgtaca gccgctgacc gaactcctga
     1681 ctagcggcca tgagcgcttc ggtggccgag ccgatggcct cgacgtcgtc ctcgcccaag
     1741 gccttcttca gaccctcgag cttctcagtg acgttggtgg tctcatcctc ggtgagctgg
     1801 tcgccctggt cggccagcaa cttgtcggtc tggtacacga ggttgtcggc gttattgcga
     1861 acctcagcct ctgccttgcg cttctgatcc tcatcagcat gggactccgc atcgcgcacc
     1921 atctgatcga tgacgtcctt gtccaacgac gactgaccgg tgatggtcat ggactgctcg
     1981 ttgtcggtcg ctcggtcctt ggccgacacg tgaacaatgc cgttggcgtc gatgtcgaag
     2041 gtgacctcga tctggggggt tccccggggg gcgggcggca ggtcgaccag ctggaacttg
     2101 cccagcgtct tgttgaactg tgacatctcg cgttcgccct gcagcacgtg gatctcgacg
     2161 gacggctggc cgtcctcggc ggtggtgaag acctcggacc gctgaatcgg aatagtggtg
     2221 ttgcgctcga tgagccgggt catgacgccg cccttggttt caatgcccaa tgacagcggg
     2281 gtcacgtcga gcaggagcac gtccttgact tcgccgacca gcacaccggc ctggaccgcg
     2341 gcgccgatgg ccacgacctc gtccgggttg acgttcttag acgggtcgcg accggcaatc
     2401 tccttagcca gatcgaccac cgcgggca
//
LOCUS       DASCMR010000250         2977 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001204700, whole genome shotgun sequence.
ACCESSION   DASCMR010000250 DASCMR010000000
VERSION     DASCMR010000250.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2977)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2977)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2977
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001204700"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2706)
                     /locus_tag="QGG16_06000"
     CDS             complement(<1..2706)
                     /locus_tag="QGG16_06000"
                     /inference="COORDINATES: protein motif:HMM:NF024867.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006302 - double-strand break repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HJP24860.1"
                     /translation="MFLKRLTIKGFKSFADSAALEMEPGVTVVVGPNGSGKSNVVDAI
                     AWVLGAQAPSAVRSQKMDDVIFAGTSTRAALGRAEVSLTIDNSSGQLPVEFNEITITR
                     TLFRSGDSEYSMNGAPCRLLDIQELLSDVGVGRQQHVIISQGQIDAVLNARPEDRRSI
                     IEDAAGILKYRRRKEKAQRRLRSTEANLDRLSDLLREVRRQLRPLERQADAARRHGDL
                     LDELTALRLHRAGRELASLRTRARDEAENRSTLAATESTHTTSLARFDAEVVAAEAEL
                     AVRGGDDLGDRLVRFEALRERGRGIRGVLVERLRGLERDRSALISQQVVVGLEAELDR
                     SEAEMGRLDAEAEELAPEAERLALAETELVADRAAFEMDWSEGIPALGGHAAEARGEL
                     GVLRASVDQAGIERNRLADRLAALDEASERLDGEADRLRADLSVGETAEEPLVAEATA
                     AEARSHQASVRRNAAWERVVAAEAEVRTASASVDALALALDEARSRAGTEHLAGIDGV
                     LGTLLDLVEVDEGFEAAFEAAAGSALDAVVVRGPDHAREALTALEEGRLSAAVLALGA
                     GATGRSAPMVGSPVRPHVRARLDVADAATGVDGLLDRLLGHAALVDAPLTEVVDLALR
                     HPEAVLVTASGDRFGPSGWRVGGDGRGATGAALAEAESRLAAAGSEQVNASAAFDDAE
                     QGTTLAEDEVARHNRSLDEHDGRFTAAAESLQRLQVERRDLATESEGLRSRVGELDQR
                     LADDGRRVAELDDRLPALEADEVASVEAGRRMNAARASLEERSATIGASRTGHDVRVA
                     EVMGRRTVVGARVVELRARLEQLSDERVAAAAQRDDLVGRESATRQLVEAIDVRMALV
                     DARLQVLREHRRQQSERVRAVAARLDGLRRERTEAETALREIRERQ"
BASE COUNT          446 a         1090 c          964 g          477 t
ORIGIN      
        1 ctgacgttcc ctgatctctc ggagagcggt ctcggcctcg gttcgctctc gacggagacc
       61 gtccagtcgg gcggccacgg cccggacccg ctcggactgt tggcgacgat gctcccgtag
      121 cacttggagt cgggcgtcga ccagggccat tcggacgtca atggcctcga ccagttgacg
      181 ggtggccgat tcacggccga ccaggtcgtc cctctgggcc gcggcggcaa ccctttcatc
      241 ggagagctgt tcgaggcggg cccgcagctc cacaacccgg gctcccacca cggtgcgtcg
      301 acccatcacc tctgcgaccc ggacgtcgtg tccggtccgc gatgcgccaa tggtggccga
      361 tcgctcctca agcgatgccc gggcggcgtt catccgccgg ccggcttcca ccgaggccac
      421 ctcgtcggcc tccagagcgg gcaggcggtc atccaactca gccacccggc ggccatcgtc
      481 ggccagacgc tggtccagtt caccgacgcg ggaccgcagt ccctcggact cggtggcgag
      541 gtcccgccgc tccacttgga gccgctgcaa tgactcggcc gccgcggtga atcgaccgtc
      601 gtgctcatcg agggaccggt tgtgacgggc gacctcgtcc tcagccaatg tggtgccctg
      661 ctcggcatcg tcgaaagccg ctgacgcgtt cacctgttct gacccggccg cggccagccg
      721 ggactcggcc tcggcgagtg cggcgccggt ggcaccccga ccatcgcctc cgacccgcca
      781 gcccgacggg ccgaaccggt cgcccgaggc ggtcaccagc acggcttcag ggtgacgcag
      841 cgccaggtcc acgacctcgg tcaacggtgc gtcgaccaac gccgcgtgac ccagcagtcg
      901 atcgagtagc ccatcgacac cggtggctgc gtcagcaaca tccaatcgag cccggacgtg
      961 ggggcgaacc ggggagccga ccatcggagc tgaccgcccg gtggcaccgg cccctagggc
     1021 cagcacggca gccgacaggc ggccctcctc cagcgcagtc aacgcctcac gagcgtgatc
     1081 ggggccacga accactaccg catccagcgc cgagccggcc gccgcctcga aggcagcctc
     1141 gaatccctcg tcgacctcga ccaagtccag cagggtgccc aacaccccgt cgattcccgc
     1201 caggtgttcg gtaccggctc gtgatcgggc ctcgtcgagg gccagggcta gggcatccac
     1261 gctcgctgat gcggtacgta cctcggcctc ggcggccacc acccgttccc acgcggcgtt
     1321 ccgccgcacc gatgcctgat gtgaccgggc ctccgcagcg gtcgcctcgg cgaccagcgg
     1381 ctcctcggcg gtctcgccca ccgacaggtc ggctcgcagg cggtcggcct caccgtcgag
     1441 tcgttccgac gcttcgtcga gcgccgccag tcggtcggcc agccgattcc gttcgatgcc
     1501 cgcctgatcc accgaggccc gtaggacccc cagctcgcct cgggcctcgg ccgcatgtcc
     1561 accgagtgcc ggaatcccct cagaccagtc catctcaaag gcggcccggt cggccaccag
     1621 ctcggtctcg gccaaggcca ggcgctctgc ttcgggcgcc agctcctcgg cttcggcatc
     1681 gagacggccc atttcggcct ctgagcggtc cagttcggct tcgagaccca ccacgacctg
     1741 ctgggagatc agcgccgagc gatcccgttc cagtccccgg agccgttcga ccagcactcc
     1801 ccggatgccc cggccccgct cacgcaatgc ctcgaatcgg actagacgat cgccgagatc
     1861 gtcgccaccg cgaaccgcca actcggcctc ggcggccacc acctcagcat cgaagcgggc
     1921 caacgacgtg gtgtgtgtgg actcggtggc ggccaacgtc gaacggttct cggcctcgtc
     1981 acgtgcccgg gtacggaggc tggctagctc gcggcctgct cgatggaggc gtagggccgt
     2041 gagttcgtcg agtaggtcgc catgtcggcg ggccgcatcg gcctgtcgtt cgaggggtcg
     2101 caattggcgc cggacctcgc ggagcaggtc cgacagccgg tccaggttgg cttcggtgga
     2161 tcgcagccga cgctgggcct tctccttgcg gcgccggtac ttcaggattc cagcagcgtc
     2221 ctcgatgatg ctgcgccggt cctcgggacg ggcgttgagc acggcgtcga tctggccctg
     2281 ggagatgatg acgtgctgct ggcggcccac gccgacgtcg gacagcagtt cctgaatatc
     2341 gagcagccgg cacggcgctc cgttcatcga gtactcgctg tcaccactgc gaaacagcgt
     2401 gcgggtgatc gtgatctcat tgaactccac cggaagttga ccggacgagt tgtcgatggt
     2461 cagcgagacc tcggcccgcc cgagggcggc ccgcgtcgag gtgccggcga agatcacgtc
     2521 gtccatcttc tgggaacgca cggcgctcgg cgcctgggca ccgagcaccc acgcgatggc
     2581 atccaccacg ttggacttgc cgctcccgtt ggggccgacc acgacggtca ccccgggttc
     2641 catctcgagg gctgccgagt cggcgaacga cttgaatccc ttgatggtca gacgcttcag
     2701 gaacacgcgc tgccgccgat cgggatcatt agggacgatc gaacacgtcc ctttacgccg
     2761 ggaatcacac ctgtgtcatt cgccatggcg ccaccctagg cgcgcgttag gccgcgcggt
     2821 cgcgcagtcc tcctctcccc atccgggagg gtcgcagggt gtccggtaag cggctcagac
     2881 ctgggtttcg cagtagtagg tccagccgcc cttgtacttg atccgctgga tcggagtccg
     2941 gttccgatcg ctgagagcgc cggcccgggc gtagacc
//
LOCUS       DASCMR010000251         3952 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001211885, whole genome shotgun sequence.
ACCESSION   DASCMR010000251 DASCMR010000000
VERSION     DASCMR010000251.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3952)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3952)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3952
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001211885"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..683)
                     /locus_tag="QGG16_06005"
     CDS             complement(<1..683)
                     /locus_tag="QGG16_06005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HJP24861.1"
                     /translation="MDLTDLDIADSVLELIGKTPMVRLSRMGAGLACPVVIKLETTNP
                     GGSSKDRPAVAMIDAAEKAGLLAPGGTIIEPTSGNTGVGLAIVAAQRGYKCVFVMTDK
                     VSTEKVSLLRAYGAEVVVCSVAVPPEDPQSYYSTAERLMNETPGAFQPNQYFNPANPQ
                     AHYETTGPEIWEQTKGRITHFVAGAGTGGTISGVGRYLKEQNPNVTIVVGDPEGSVYS
                     GGSGRPYLV"
     gene            complement(1292..3568)
                     /locus_tag="QGG16_06010"
     CDS             complement(1292..3568)
                     /locus_tag="QGG16_06010"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase"
                     /protein_id="HJP24862.1"
                     /translation="MTVAASTPIQLIQGVYATLDERVATGRRRLGRALTLAEKVLVNH
                     LDDPEASGLERGVSYVDLRPDRVAMQDATAQMAWLQFMTAGLDEVRVPTTTHCDHLIE
                     ARDDGKLDLATALDGNREVYDFLASVCARYGAGFWKPGSGIIHQVVLEQYAFPGGMMI
                     GTDSHTPNAGGLGMVAVGVGGADAVDVMTGFPWNVRWPKLIGVKLTGELNGWTAPKDV
                     ILKVADILTVKGGTGAIVEYFGSGARSMSATGKATICNMGAEIGATTSMFAYDDAIGR
                     YLKSTGREAVADAANAVAQHLRADDEVEADPGSYFDEVIEIDLSTLSPHINGPHTPDL
                     ARPVADLGAEAKREGWPLEVSAGLIGSCTNSSYEDITRAASIARDAVAKGLTAKAPLL
                     ITPGSEQVRATIERDGLLADFEALGAQVLANACGPCIGQWDRQDLDDGIPNSIVTSYN
                     RNFPKRNDGYATTHAFVTSPETVIALTIAGRLDFDPANDTLLNEAGDEVRLTVGDGEE
                     LPADGFDPGEETFQAPPADGSDIQVEVSPTSDRLQLLTPFAAWDGGDLTDLTVLVKAQ
                     GKCTTDHISMAGPWLKYRGHLENISGNVYMGAVNAFTGEVGTGWDVTDGETRTYPEIA
                     RRYHEAGVAWAAIGDENMGEGSSREHAAMEPRFRGAKVVIARSFARIHETNLKKQGVL
                     PLTFADPADYDLIGPEDRISVVGVADLAPNVPVAVVVAAPDGTETRISCRHTYSADQI
                     EWFKAGSALNLIRARSVS"
BASE COUNT          649 a         1148 c         1361 g          794 t
ORIGIN      
        1 tctaccaggt acgggcgtcc cgatcccccg gagtagaccg aaccttcagg gtcgccgacc
       61 acgatggtca cgttcgggtt ctgctccttt aggtaacggc cgacgccgct gatcgttcca
      121 ccggttccgg ctccggccac gaagtgtgta atgcggccct tcgtttgttc ccagatctcg
      181 ggtccggtgg tctcgtagtg ggcctggggg ttagccgggt tgaagtactg gtttggctgg
      241 aaggcaccgg gggtttcatt catgagccgc tcggctgtcg agtagtagga ctgcgggtcc
      301 tcgggtggaa cggcgacgga acacacgaca acctcggctc cgtaggcccg tagtagtgag
      361 accttttcgg tgctgacctt gtcggtcata acgaacacgc acttgtagcc gcgttgagcg
      421 gcaacgatgg ctagaccgac cccggtgttg cctgatgtgg gttcgatgat tgtcccaccg
      481 ggcgcaagga ggccagcctt ttcggcagcg tcgatcattg caacggctgg tcggtccttg
      541 ctgctgccgc ctggattggt ggtttcaagt ttgatgacca ccgggcaggc caggccggca
      601 cccatgcgtg acaggcggac catcggcgtc ttgccaatta gttcaaggac ggaatcggcg
      661 atgtcaaggt cggtgaggtc cataggaaaa tctgagtgaa ttgggtggcg cttggtcagc
      721 ggtcgttgct ttagacggcg cacgccatgt cggcgccaca gcacatcggg gacttgatct
      781 tcccgtggcc attgggacac tttgagacct caacggtaga gccgtcgtcc ttgtccaaaa
      841 tcgcgtcaac taggggttca tcgcatgcgc cacaagtggc gtttacggac attccgcacg
      901 agctgcaggt ataggtagcc acaggggtcc ttactcttta gacgacggtc gatacttgtt
      961 cggtgtctgc gggtgagaat cccgcttcta ggaacagtac agcccttcac tggaagagct
     1021 catggtgaac cacgtcattt cagtgagctt tggtgctgac gaatcggtgg tggccactgg
     1081 tgtttgcgga cagccgacac gccatcggta gtgcgaacag tctgtctgcc tggaacgctt
     1141 ctcgtgcgag gtgattgatg gggtctggtg cacggtcggc aatggccggt cgaatcaggc
     1201 tttcgttggg gctccgacag gctggttgca atcgactttg gtgggccagt cgaacaaatg
     1261 gtcggtgagt gagaggccgc cgtggctccg gtcaggagac ggagcgtgcc cggatgaggt
     1321 tcagcgcgct accggccttg aaccattcga tctggtcggc cgagtaggtg tgccggcagc
     1381 taatccgggt ctcggtgccg tcaggagcgg cgaccaccac ggctaccggt acgttgggtg
     1441 ccaggtcagc caccccgacc accgatatgc ggtcctcggg cccaatcagg tcgtagtcgg
     1501 cggggtcggc gaaggtcagc ggtaggacgc cctgcttctt caggttcgtt tcgtggattc
     1561 gcgcgaacga gcgggcaatg accaccttgg cgccacggaa gcggggctcc atggctgcgt
     1621 gctcacgcga cgacccctcg cccatgttct cgtcgccgat ggccgcccag gccacgccgg
     1681 cctcgtggta gcggcgggcg atctccggat aggtccgggt ttcaccgtcg gtgacgtccc
     1741 agccggtgcc cacttcgcca gtgaaggcgt tgacggctcc catgtagacg ttgcccgaga
     1801 tgttctcgag atggccccgg tacttcagcc acgggccggc catcgagatg tggtcggtgg
     1861 tgcacttgcc ctgcgccttg accagaacgg ttaggtcggt caggtcacca ccgtcccatg
     1921 ccgcgaacgg tgtcagtagt tgcaggcggt cactcgtcgg tgacacttcg acctggatgt
     1981 ccgaaccgtc ggccggcggg gcctggaagg tctcttcccc cgggtcgaag ccgtcggcgg
     2041 gcagttcctc gccgtcgccc accgtgaggc ggacctcgtc gccggcctcg ttcagcagtg
     2101 tgtcgttggc cggatcgaag tcgagtcggc cggcgatggt cagggcgatc accgtctcag
     2161 gggaggtcac gaacgcgtgg gtcgtggcgt agccgtcgtt gcgcttgggg aagttccggt
     2221 tgtagctggt gactatggag ttggggatcc cgtcgtcgag gtcctgacgg tcccactggc
     2281 cgatacaggg cccacaagcg ttggccagca cctgggcgcc cagcgcctcg aagtcggcca
     2341 gcaggccgtc tcgctcgatg gtggcccgga cctgctcgga gccaggggtg atgagtagtg
     2401 gtgctttggc ggtcaggccc ttggctacgg cgtcacgggc gatgctggcc gcccgtgtga
     2461 tgtcctcgta gctggagttg gtgcacgaac cgatgagccc ggcactgacc tccagcggcc
     2521 agccctcgcg cttggcctcg gccccaaggt ctgcgaccgg acgggccaag tcgggggtgt
     2581 gggggccgtt gatgtgcggc gacagggttg acaggtcgat ctcgatgacc tcgtcgaagt
     2641 aggagccggg gtcggcctca acctcgtcgt cggctcgcag atgttgggcc acggcgttgg
     2701 cggcgtcggc cacggcctca cgacccgtcg acttgaggta gcggccaatg gcgtcgtcat
     2761 aggcgaacat cgaggtcgtg gcgccgatct ctgctcccat gttgcagatg gtggccttcc
     2821 cggtggccga catgctccgt gcacctgatc cgaagtattc gacaatggca ccggttccgc
     2881 ccttcacggt gaggatgtcg gcgactttca ggatcacgtc tttcggggct gtccatccgt
     2941 tcaattcgcc ggtcaacttc acgccgatca acttgggcca acgcacgttc cacgggaatc
     3001 ccgtcatgac gtcgacggca tctgcgccac ctacgccaac cgcaaccatt ccgagtccac
     3061 cggcgttggg ggtgtggctg tcggtcccga tcatcatccc gccggggaag gcgtactgct
     3121 cgaggacgac ctggtgaatg atccctgagc cgggcttcca aaaaccggcg ccgtagcggg
     3181 cgcagaccga agccaggaag tcgtagacct cgcggttgcc gtcgagggcg gtggccaggt
     3241 ccaacttgcc gtcatcgcga gcttcgatga ggtgatcgca gtgggtggtc gtggggaccc
     3301 ggacctcatc gaggccagcg gtcatgaact gcagccaggc catctgggcc gtcgcgtcct
     3361 gcatggcaac ccggtccggt cgtaggtcga cgtaggagac gccgcgctcg aggccggagg
     3421 cctccggatc gtcaaggtgg ttgacaagta ccttctcagc cagggtgaga gcacggccca
     3481 gacggcgacg gccggtggct acccgctcgt cgagagtcgc gtagacgccc tggatcagtt
     3541 ggatgggggt ggatgctgcg actgtcatag gggtggattc ctctaggtgg gacggcgggg
     3601 ggcggtgcgc atctcgcaga ggctgggcgg tggatttcga agaatgcagg tgatcctggt
     3661 cggattattt atcaatgttc caagattatc tatgtggttg gttggctagg ggagtcgagt
     3721 acccaaataa agccagtagt tgggttaaaa gtgaagtgcg agcgaaatga cgctggtcag
     3781 agcgccggcc agcgacgtcg gcgacgttgt gaactgcggt cacggtcgcc aagggcccag
     3841 gctcgacgcc atgcccccac gtcgggtccg gttaggccgg gcgaggtgcc ggcgtgggca
     3901 cgaatgcggg cctggtacca gtccgacgtc gcctcgtcgc cgagagcggc ca
//
LOCUS       DASCMR010000252         1798 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001214151, whole genome shotgun sequence.
ACCESSION   DASCMR010000252 DASCMR010000000
VERSION     DASCMR010000252.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1798)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1798)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1798
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001214151"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..455)
                     /gene="trpA"
                     /locus_tag="QGG16_06015"
     CDS             complement(<1..455)
                     /gene="trpA"
                     /locus_tag="QGG16_06015"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012229431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HJP24863.1"
                     /translation="MSVRNEDGGSRVNGPVEAALRARRDGGGKCLVVYVTGGLGDDWL
                     DTARAVAAAGADVIEIGVPFSDPVMDGPTIQAANDVALAGGATPVSILDALRDADVGV
                     PLAVMTYYNIAFRMGLERFAKSLIVSGVSGCILPDLPLEEAGPWLEVADG"
     gene            complement(452..1606)
                     /gene="trpB"
                     /locus_tag="QGG16_06020"
     CDS             complement(452..1606)
                     /gene="trpB"
                     /locus_tag="QGG16_06020"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HJP24864.1"
                     /translation="MTLQEPTPDGRFGEFGGRFVPETLIPAVLELEVEFRKAWADPTF
                     RTELDALLADYAGRSSPMTECHNLSSELGCRLFLKREDLNHTGSHKINNVLGQALLAK
                     RMGKTRLLAETGAGQHGVASATAAALLGMECCVYMGEVDVKRQELNVFRMHLLGAEVR
                     TAMSGSRTLKDAVNEAMRDWVATVEESHYCLGSVMGPHPYPWMVRTFHEVLGREAREQ
                     SEALLGGPPDMVVACVGGGSNAIGIFSGFSDAATELVGVEPAGGAAVGRGVPGVVHGM
                     DSYLMQDEFGQVLEAESISAGLDYPGVGPEHSHLASVGRARYEAVTDDEVVEAFQLLS
                     RSEGIIPALEPAHALAWVSRERAALAGKSVVVNLSGRGDKDVAQMMGILA"
     gene            complement(1603..>1798)
                     /locus_tag="QGG16_06025"
     CDS             complement(1603..>1798)
                     /locus_tag="QGG16_06025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24865.1"
                     /translation="VASGVEAGPGRKDPRLLRAFMINARAARPTRIEGYRGDMENRPF
                     DWQQDEVESPDGADRGMDRP"
BASE COUNT          341 a          650 c          501 g          306 t
ORIGIN      
        1 ccatccgcca cctccaacca cggaccagcc tcctccaaag gaaggtcggg caggatgcag
       61 cccgacaccc ccgaaacgat cagcgatttg gcaaaccgtt ccagacccat gcgaaaggcg
      121 atgttgtagt aggtcatcac agccagcggt acgcccacat cggcatcccg aagggcgtcg
      181 agaatgctca ccggcgtagc accaccagcc agagccacat cattggcggc ctggatcgtc
      241 ggaccatcca ttaccggatc cgagaacggc accccgattt cgatcacgtc ggcaccagcg
      301 gcggccaccg cccgtgccgt gtctagccag tcgtcgccaa ggccgccggt gacgtacacg
      361 acgaggcatt ttccgccacc atcacgtcga gcacgcagtg ccgcttcgac cggaccgttc
      421 acccttgagc ccccatcttc gtttcggaca ctcacgccag gatgcccatc atctgggcca
      481 cgtctttgtc gccacgtccc gacagattca ccaccactga ttttccggcc agagcagccc
      541 gttcccgcga tacccaggcc agggcatggg ccggctccag tgccggaatg atcccctcgg
      601 accggcttag cagttggaag gcctcgacca cctcgtcatc ggtgaccgcc tcgtaccggg
      661 cccggccgac ggaggctaga tggctgtgct cggggccgac ccctgggtaa tccaggccgg
      721 cactaatcga ctcggcctcc agcacctgac cgaactcgtc ctgcatcagg taggagtcca
      781 tcccgtggac cacccctggt actccacgcc ccaccgcggc tccacccgcc ggctccacac
      841 cgactagttc ggttgccgcg tcggaaaagc ccgagaagat gccaattgca ttggacccac
      901 cacccacaca ggccacaacc atgtcgggcg gaccacccaa cagggcctca ctctgctcgc
      961 gggcctcacg acccagtacc tcatggaacg tccggaccat ccacgggtac gggtgggggc
     1021 ccatgaccga tccgaggcag tagtgcgact cttccaccgt ggccacccaa tccctcatgg
     1081 cctcgttcac cgcgtccttg agagtacggc tacccgacat ggccgtccgg acctcagcgc
     1141 ccagaaggtg catccggaaa acattgagtt cctgtcgctt aacgtcgacc tcgcccatgt
     1201 aaacgcagca ctccatgccc aggagggcgg ctgcggtggc cgaggcgaca ccgtgctggc
     1261 cagccccggt ctcggccagc aggcgggtct tgcccattct cttggccagc agggcctgac
     1321 ccagcacgtt attgatcttg tgggaacccg tgtgattcag gtcttcccgc ttcaggaaca
     1381 agcggcagcc cagttccgag gacaggttgt gacactcggt cattggggac gaccgaccgg
     1441 cgtagtcagc caatagggca tccagttcag tccggaaggt cgggtcggcc caggccttac
     1501 gaaactccac ttcgagctcg aggacggccg gaatcagcgt ctcgggcacg aatcggccac
     1561 cgaactcacc gaacctcccg tccggtgtgg gctcctgcag tgtcatggtc ggtccattcc
     1621 tcgatctgct ccatcgggag attcgacttc gtcctgctgc caatcgaacg ggcgattctc
     1681 catgtcgccc cgatagccct caattcgggt cggtcgggcc gctcgcgcat tgatcatgaa
     1741 cgctcgcaac aggcggggat ccttgcgccc aggcccggct tccacgccgc tcgccacg
//
LOCUS       DASCMR010000253         1618 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001222462, whole genome shotgun sequence.
ACCESSION   DASCMR010000253 DASCMR010000000
VERSION     DASCMR010000253.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1618)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1618)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1618
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001222462"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1237
                     /gene="glnT"
                     /locus_tag="QGG16_06030"
     CDS             <1..1237
                     /gene="glnT"
                     /locus_tag="QGG16_06030"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR03105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="type III glutamate--ammonia ligase"
                     /protein_id="HJP24866.1"
                     /translation="DDLLEVGAGFAGFAAGPLSQNPADPDILAIPDPDSYVQFPWQPN
                     VAAMQCDATVEGELWPYAPRVILQQVLARAAEQNLVLKAGAEVEYSLLRRHEDGSLSV
                     ADEQDVSTAPCYDARGLTAVLDHLSTVSRHMDAMGWGNYANDHEDANGQFEQNFKYAD
                     ALTTADRLVVLRLMLHTLARRDGRYVTFMPKPFADKTGNGLHTHLSLWTADSDEPLFH
                     DDDDPRGLGLSEMAYQFTGGILDHAQGLTGIVCPTVNSFKRIGVGPPDSGATWAPSYV
                     AYGGNNRTQMIRIPEGGRLEVRVPDGSANPYLALAALLASGLDGIERAVDPGEPNTDN
                     LFTLSLDEIAARGIAALPPTLLHAMDALVADDALRSAMGSGRDGDYVDYFAEVKRAEF
                     RAVNDQVSPAEIDRYLTLM"
     gene            complement(1298..>1618)
                     /locus_tag="QGG16_06035"
     CDS             complement(1298..>1618)
                     /locus_tag="QGG16_06035"
                     /inference="COORDINATES: protein motif:HMM:NF024591.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-dependent synthetase"
                     /protein_id="HJP24867.1"
                     /translation="IIRGGENIYPRELEELLFAHPTVGEVAVVGLPDDKWGEVVSAFV
                     RPAPGQAIDRNELFTYLREHLAPHKTPRHWFEVEEYPLTGSGKIQKFVLRDQWVDGQW
                     TEMA"
BASE COUNT          263 a          544 c          530 g          281 t
ORIGIN      
        1 tgacgacctg ttggaggtgg gtgccgggtt tgccgggttc gccgccgggc cgcttagcca
       61 gaatccggcc gaccccgaca tcctggccat ccccgatccg gattcgtacg tccagttccc
      121 gtggcagccc aacgtggccg ccatgcagtg cgacgccacc gtggagggcg agctttggcc
      181 ctacgcgccg cgggtaatcc tgcagcaggt gctcgcccgg gccgccgagc agaacctggt
      241 actcaaggcg ggagccgaag tggagtactc gctgctgcgg cgtcacgagg acggctcgct
      301 gagcgtggct gacgagcaag acgtgtcgac ggcgccctgc tacgacgctc ggggcctgac
      361 ggcggtgctc gaccacctga gcacggtgtc acgacacatg gatgccatgg ggtggggcaa
      421 ctacgccaac gaccacgagg acgccaacgg ccagttcgag cagaacttca agtacgccga
      481 tgcccttacc accgccgatc gcctggtcgt gcttcgcctg atgttgcaca cgctggcccg
      541 acgggatggt cggtacgtaa cgttcatgcc caagccgttc gctgacaaga cgggcaatgg
      601 gttgcacacc cacctcagcc tgtggactgc cgactccgac gaaccgctgt tccacgacga
      661 cgacgatccg aggggactgg gcctcagtga gatggcctac cagttcaccg gcgggatcct
      721 ggaccacgcc caggggctga ccgggatcgt ctgcccgacg gttaactcgt tcaagcgcat
      781 tggtgttggt ccgcctgact cgggggccac ctgggcgcct tcgtacgtgg cctatggagg
      841 gaacaacagg acacagatga tccgcatccc cgagggtggc cgcctcgagg tccgggtgcc
      901 cgatgggtcg gctaacccct acctggccct ggctgccctg ttggccagcg gcctggacgg
      961 gattgaacgt gctgtggatc cgggcgagcc caacaccgac aacctgttca cgctgtcact
     1021 tgacgagatc gccgcccggg gcatcgccgc gctgccgccc accttgctgc acgccatgga
     1081 tgccctggtg gccgacgacg ccctccgatc agcgatgggg tcgggtcgcg atggcgacta
     1141 cgtggactac ttcgccgagg tgaagcgggc cgagttccgt gccgtcaacg accaggtctc
     1201 tccggccgag atcgaccggt acctcacgct gatgtagagc agccggtcgc tcctgatcgg
     1261 ttgccctcgg tggcctattg ccattcccgc cgcgggatca ggccatctcc gtccactggc
     1321 cgtccaccca ctggtcgcgg agcacgaact tctggatctt gccgctaccc gtgagtgggt
     1381 actcctctac ttcgaaccag tggcggggcg tcttgtgggg cgccaggtgt tcccgaaggt
     1441 aggtgaacag ctcgttgcgg tcgatggcct ggccgggggc cggccgcacg aaggccgata
     1501 ccacctcacc ccacttgtcg tcgggtaggc ccaccacggc cacttcgccc accgtggggt
     1561 gggcgaacag caactcctcg agctccctgg gatagatgtt ctcgccgccc cggatgat
//
LOCUS       DASCMR010000254         9033 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001223020, whole genome shotgun sequence.
ACCESSION   DASCMR010000254 DASCMR010000000
VERSION     DASCMR010000254.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 9033)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9033)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9033
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001223020"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..737)
                     /gene="meaB"
                     /locus_tag="QGG16_06040"
     CDS             complement(<1..737)
                     /gene="meaB"
                     /locus_tag="QGG16_06040"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HJP24868.1"
                     /translation="MDVPELVDGVLAGDRASIGRALTLVESSHPGHQAEVTALLDALS
                     PHASDSHRVGITGVPGVGKSTFIESLGGRLTAAGRRVAVLAVDPTSTVTGGSILGDKT
                     RMLNLANDPAAFVRPSPSAGTLGGVTRTTRESMVVLEAAGYDVVLVETVGVGQSEMVV
                     AGMVDFFLLLMLPGAGDELQGIKKGVLELADMIAVNKADGENAPAARTAVRDYTAALR
                     LTHPTSPTGTPPVVMCAGLSGEGLDEV"
     gene            complement(745..2964)
                     /gene="scpA"
                     /locus_tag="QGG16_06045"
     CDS             complement(745..2964)
                     /gene="scpA"
                     /locus_tag="QGG16_06045"
                     /EC_number="5.4.99.2"
                     /inference="COORDINATES: protein motif:HMM:NF006944.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004494 - methylmalonyl-CoA mutase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase"
                     /protein_id="HJP24869.1"
                     /translation="MIPDFTTVSLAPDTDGRASVDPGTRVDSDVWVDQVVAETGCTPD
                     ELARDTPEQIRVPILSTPVEGAADGSLNTGFTDAWPGVAPYLRGPYPTMYASQPWTVR
                     QYAGYSTAEESNDFYRRNLAAGQKGLSVAFDLPTHRGYDSDHPRVPGDVGMAGVAIDS
                     IYDMRTLFDGIPLDRMSVSMTMNGAVLPILALYVVAAEEQGVSPDQLAGTIQNDILKE
                     FMVRNTYIYPPGPSMRIVSDIFAFTSTEMPRFNSISISGYHMQEAGATADLELAYTLA
                     DGVEYVRAGIAAGLEVDAFAPRLSFFWAIGMDFFMEVAKLRAARLLWAGLMRQFEPTD
                     PRSSSLRTHSQTSGWSLTAQDVYNNVVRTCVEAMAATQGHTQSLHTNGLDEALALPTD
                     FSARIARNTQLFLQQESGTCRVADPWGGSHHVERLTRDLAVRALAHMDEVEESGGMAR
                     AIEAGIPKLRIEEAAARTQARIDSGRQSVVGVNRYRLDTEDPLEVRKVDNAQVRADQL
                     AKLELLRAERNPQECVAALEALTRSASSGDGNLLALAIDAARARATVGEISDALEKVY
                     GRYVAEVRTISGVFNSEVGNGEAVASARSRVAAFEADAGRRPRILVAKMGQDGHDRGQ
                     KVIATAFADLGFDVDIGPLFSTPDEVARQAVENDVHVVGVSSLAAGHLTLIPELRDAL
                     TAHGRTDIAIVVGGVIPPDDHDALLAAGAAAVFPPGTVVATAAVDLLEALVAGPATR"
     gene            complement(2961..4814)
                     /locus_tag="QGG16_06050"
     CDS             complement(2961..4814)
                     /locus_tag="QGG16_06050"
                     /inference="COORDINATES: protein motif:HMM:NF013781.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HJP24870.1"
                     /translation="MDPHALSTDGFVTVDRAEWVALAEAGLQGRTLASLATITADGIE
                     IAPVYSPDADRDPNGSDDRFGLPGSGDRTRGSSAAGRTTNGWDVRALVADDGPDAANA
                     TVLDELERGSTSVLLDVEAIGIRSLDDLDTVLAGVHLEMATVALMPGPTSVAAAGWLL
                     DLWEQRGTPTDEQAGLLGLDPLGVAARHGGEPDVGAGVLAIVDRARGLPGVRAFTVDG
                     TVFADAGASDARELGWTTAGGVAVLRALVDHGLTIDEALDQLAFTWSADADQFRTICR
                     LRAARRLWARVAETSGADTAHRGQVQHAMGSAVDLTRRDPWGNLLRGTVAAFAAGIGG
                     ADAVTVRPFDSVLGRSDAFGRRTARNTQVLLLEESALASVVDPAGGSWYVEDLTSRMA
                     DAAWDRFRDVEAAGGIAAALTSGLIGREADACWEARRTRLATRAEAITGVSEFPDLDE
                     NLPERPPAPSDPSGPLPLRRRSEAFEALRDAADAAELTPTVRLVTVGDLADHTARSTF
                     VTNLYAVAGIRALACPASNTGSSVAVVCGSDGGYTAEGVAVVAALRAEGMSRIHLAAR
                     AASLDDDLVAALIGAGVDEFVHAGSDVIDLMGRTLDALGVDTPVDVEGEWA"
     gene            4864..5001
                     /locus_tag="QGG16_06055"
     CDS             4864..5001
                     /locus_tag="QGG16_06055"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24871.1"
                     /translation="MTCLQPGLMAVARSAFADGYSLAILVGATMLISASAVILRWFPR
                     D"
     gene            5004..6122
                     /locus_tag="QGG16_06060"
     CDS             5004..6122
                     /locus_tag="QGG16_06060"
                     /inference="COORDINATES: protein motif:HMM:NF012517.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HJP24872.1"
                     /translation="MQPRVPEQQVPQGPVPQRPFTPARLGAMRISTSLNYATDPQTAA
                     AQARELEAAGVDRIWIPEAYGFDAVSLLGYLAASTSTVELGSGILNTYSRTPALLAQT
                     AAGLDALSEGRFVLGLGASGPQVIEGFHGMPYAKPLTRIKEIIEICRSAWRREPLVYD
                     GNVFTLPLPPDQGTGLGKPLKIINHLKRAEIPIYIAALGQKSVEETAASCEGWLPFLV
                     YPERMAQVWGDAVNAGLARRDAALDDFDVVAGGLVAIGDDAAQYRDLGRPMAALYIGG
                     MGARGKNFYNDVCRQYGFADEAAAVQDAYLDGRKEEAAGLLPDELIENTSLCGDEAYV
                     VDRLAAYKDAGVTSLNVTPIGGEAATVLGRLRELAEHA"
     gene            complement(6123..6932)
                     /locus_tag="QGG16_06065"
     CDS             complement(6123..6932)
                     /locus_tag="QGG16_06065"
                     /inference="COORDINATES: protein motif:HMM:NF024950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HJP24873.1"
                     /translation="MDLNGARVLVTGGSKGIGASLARAYAAAGANVVVAARPSDELDA
                     VATEVGGHAVAVDLTDAAAVEDFIPGVEADLGPVDVLVNNAGMETIDMAAVIDPAVIR
                     ATTRLNLEAPMVLTRHVLPQMLERGRGHLVFLSSIAGTAGFPTMATYCATKAGISNFV
                     RALTLELKATSIGTTTVAPGPVATRMWEAVESTSPSGQKVLDRMNAVRMLPIADPDRL
                     ARKVVAATQRGTRHVRTPRRLMGNFLMAEGANRMTGALLAGVKLDPTDSRR"
     gene            7040..8203
                     /locus_tag="QGG16_06070"
     CDS             7040..8203
                     /locus_tag="QGG16_06070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HJP24874.1"
                     /translation="MPPEIDLIKPFTVSITDEAIDDLRRRLADTRWPDQIPDTGWDYG
                     CDQRWLRDLAGWWADGFDWRAAEARINAFEQLVTTIDGQQIHAIHHRSPEPDARPLLL
                     SHGWPGSIVEFLEVLGPLTDPASHGGDPADAFHVVAPSLPGYGWSGPTSERGWGPDRT
                     GRAFAALMARLGYDRYGVQGGDWGSIISQHVAGHAPDHVTGCHLNMVAAFPPGRDDDL
                     ADITPAEQQHLDRVAWYQKEDSGYFEIQRTRPQTVGAGLHDSPVGLLAYIGEKFHGWT
                     DHDGDALDVVDRDQLLANVATYWFTGTITSSTRFYFEFGKDLAAGKLPPPNPDVPLGV
                     SAFPMELMVGRRRWVEADRNVTFWREHDRGGHFAAMERPVELVADLREFFRGL"
     gene            8203..8952
                     /locus_tag="QGG16_06075"
     CDS             8203..8952
                     /locus_tag="QGG16_06075"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJP24875.1"
                     /translation="MGTEALRITAADGISIAVDSSGDAGAAGRPPIVATHGWANDRSV
                     WTPLVGELVGEPAGGHQVVTWDLRGHGDSDAPPPGAYSRKHVLADLAAVRDHAVGSGG
                     GSAILMGHSLGGFLCLAHAVDHPDEVAGLVLVATGPGFRKAEAREQWNESVRESAVKI
                     GVPPGSEEISMHHDSYVIDHLAEIQVPVLVLLGEHDKRFAASASLFERDLDVRESVVV
                     PDQGHMVHVKAPAECAAAIRHFFADLTRTTT"
BASE COUNT         1469 a         3172 c         2938 g         1454 t
ORIGIN      
        1 cagacctcgt ccagaccctc gcccgacagg ccggcgcaca tcaccaccgg cggggtcccc
       61 gtagggctgg tcgggtgggt gaggcgtaac gcggccgtgt agtcccggac cgctgtgcgg
      121 gccgccgggg cattctcccc gtcggccttg ttcacggcga tcatgtcggc caactccagc
      181 acgcccttct tgatgccctg aagttcgtca ccggcacccg gcagcatcag taacaggaag
      241 aagtcgacca ttccggccac caccatctcg gactggccca cgcccactgt ctcgacgagc
      301 accacgtcat agccagcagc ctcgagcacc accatcgact cccgggtcgt gcgggtcact
      361 ccgccgagcg ttccggcact gggcgacggt cggacgaacg ctgccgggtc gttggccaga
      421 ttcagcatgc gggtcttgtc gcccaggatg cttccgccgg tgaccgtgct cgtcggatcg
      481 acagccagca cggcgacccg acggccggcc gcggtcaggc ggcccccgag agactcgatg
      541 aacgtggact tacccacccc cggcaccccg gtgatgccca cgcggtgtga atccgaggcg
      601 tggggtgaga gggcgtcgag cagcgcggtc acctcggcct ggtggccggg gtggctcgac
      661 tcaacgagcg tcagggcccg accgatcgat gctcgatcgc cggccagcac gccgtcgacg
      721 agttcgggga cgtccatgga tcgtctatcg ggtggctggt ccggccacca gcgcttcgag
      781 caggtcaacg gcagcggtgg ccaccaccgt gcccggggga aacaccgccg ctgcaccagc
      841 ggccagcagc gcatcgtggt cgtcaggtgg gatgactcca ccgaccacga tggcgatatc
      901 agtgcgaccg tgggctgtca gggcatcgcg tagttctggg atcagtgtca ggtgaccagc
      961 ggccagcgag ctcacgccca ccacgtggac gtcgttctcg acggcctgac gggccacctc
     1021 gtcgggtgtc gagaagagtg gcccgatgtc gacgtcgaaa cccaggtcgg caaatgccgt
     1081 ggcgatgacc ttctgaccgc ggtcgtgacc atcctgaccc atcttggcca ccaggatccg
     1141 ggggcgccga ccggcgtcgg cctcgaaggc cgctactcgg gaacgggccg aggccactgc
     1201 ctccccattg cctacctcgc tgttgaaaac tccggagatg gtgcggacct ccgccacgta
     1261 acgcccgtag accttttcga gagcgtcgct gatctccccg accgtagccc tcgcccgcgc
     1321 tgcgtcgatg gctagcgcca gcaggttgcc atcaccggat gacgcgcttc tcgtgagggc
     1381 ctccagtgcg gcgacacact cctgcggatt gcgctcggcc cggaggagtt ccaacttggc
     1441 taactggtca gcccggacct gggcgttgtc gaccttgcgc acctcgaggg gatcctcggt
     1501 gtccaaccgg tagcggttca ctccgaccac cgactggcgg ccggaatcga tacgggcctg
     1561 ggtacgggcc gccgcctcct cgatccgcaa cttgggaatc ccggcctcga tagctctggc
     1621 cataccacct gattcctcca cttcatccat gtgggccagc gcccgcacgg caaggtcccg
     1681 ggtgagacgc tccacatggt gactgccgcc ccacgggtcg gccacccgac aggtaccgct
     1741 ttcctgctgg aggaacaact gggtattgcg ggcgatacgg gccgagaagt cggtgggcag
     1801 cgccaaggcc tcgtccaggc cgttggtgtg cagcgactgg gtgtggccct gagtggcggc
     1861 catggcttcc acgcacgtcc ggaccacgtt gttgtagacg tcctgtgcgg tgaggctcca
     1921 acctgaggtc tgggagtggg ttcgcagcga cgacgaccgg gggtcagtcg gctcgaactg
     1981 gcgcataagg ccggcccaga ggagccgggc ggcccggagc ttggccacct ccatgaagaa
     2041 gtccatgccg atggcccaga agaagctcaa ccggggggcg aaggcgtcga cctccagtcc
     2101 ggcggcgatc ccggcccgca cgtattccac gccgtcggcc aacgtgtagg ccagttccag
     2161 gtcggccgtc gccccggctt cctgcatgtg gtagccggag atggagatgg agttgaagcg
     2221 gggcatctcg gtgctggtga aggcgaaaat gtccgacacg atccgcatgg acgggcccgg
     2281 cggatagatg tacgtgttcc ggaccatgaa ctccttgagg atgtcgttct ggatggtccc
     2341 ggccagctgg tccggcgaca ccccctgctc ctcggcggcc accacgtaca gggccagaat
     2401 gggcagcacc gccccgttca tggtcatcga cacgctcatc cgatccaacg ggattccgtc
     2461 gaacagtgtc cgcatgtcat agatggaatc gatggctacc ccggccattc ctacgtcacc
     2521 aggcacccgc gggtggtcgc tgtcatagcc gcggtgggtg ggcaggtcga aggccacgct
     2581 gaggcccttc tggccggcgg ccaggttgcg ccggtagaag tcgttgctct cctcggcggt
     2641 cgaatagccc gcgtactggc gcaccgtcca cggctggctg gcgtacatcg tcgggtacgg
     2701 gccccgtagg tacggagcga cacccggcca ggcatcggtg aagcctgtgt tcagagaccc
     2761 gtcggcggca ccctcgaccg gtgtggagag gatgggcaca cggatctgtt cgggggtgtc
     2821 gcgggccaac tcgtcgggtg tgcagcccgt ctcggccacc acctgatcga cccatacgtc
     2881 cgaatcaacc cttgtacccg ggtcgactga agcccgacca tcggtatccg gcgccagaga
     2941 gactgtcgtg aagtcaggga tcatgcccac tccccttcga cgtccaccgg ggtgtcgaca
     3001 cccaatgcat ccagcgtccg tcccatcagg tcgattacat cggagccggc gtgcacgaac
     3061 tcgtcgacgc ccgccccaat cagcgcagcc accaagtcgt cgtccaggct tgccgcccga
     3121 gctgccaggt ggatacggga catgccctcg gcccggaggg cggccaccac ggcgacaccc
     3181 tccgccgtgt aaccaccatc cgatccacac accacggcca ccgacgaccc ggtgttcgaa
     3241 gcggggcaag caagcgcccg gatgccagcc accgcgtaaa ggttggtgac gaacgtgctc
     3301 cgagccgtgt gatcggccag atcgcccacc gttacaaggc gcaccgtggg cgtcagttcc
     3361 gcagcgtccg cagcgtcccg gagggcctcg aacgcctcgg atcggcgtcg gagaggtaac
     3421 ggccccgacg gatccgacgg ggccggcggc cgttcgggga ggttctcgtc gaggtcgggg
     3481 aactctgaca cgcctgtgat ggcttcggcc cgggtggcca gccgggtccg gcgagcctcc
     3541 cagcaggcgt cggcttcccg gccgatcagt cccgaggtga gcgccgcggc gattcctccg
     3601 gccgcttcga cgtcgcggaa gcggtcccag gctgcgtcgg ccatgcgaga cgtcaggtcc
     3661 tcgacatacc aggacccacc ggccggatcg acgaccgaag ctagggcgct ctcctcgagc
     3721 aaaagtacct gggtattgcg ggccgttcgt cggccgaacg cgtcggaccg accaagaacc
     3781 gagtcgaagg gacgaaccgt cactgcgtcg gccccaccga tgccagccgc gaatgcggcc
     3841 accgtgcccc gcaggaggtt gccccacgga tcccgacggg tcaggtcgac cgccgaaccc
     3901 atagcgtgct ggacctgtcc ccgatgggca gtgtccgcgc cgcttgtctc cgcaacccgg
     3961 gcccagagtc ggcgcgccgc tcggagccgg cagatggtcc ggaactggtc agcatcggcc
     4021 gaccacgtga aggcaagctg gtcgagagcc tcgtcgatgg tcaacccatg atcaaccagt
     4081 gcccgtagca cggccacccc accggccgtg gtccagccca gctcccgtgc gtcgctcgcc
     4141 ccggcgtcgg cgaacaccgt gccatccacc gtgaacgccc gaacgccggg cagtccccgg
     4201 gcacggtcca cgatggcgag cacgccagca ccgacgtctg gctcaccacc gtgacgggct
     4261 gccacaccca gcgggtccag acccaggagg ccggcctgtt catcggtcgg cgtgcccctt
     4321 tgttcccaga ggtcgagcag ccatccggcg gccgccacgc tggtcggacc gggcatcagg
     4381 gccacggtcg ccatctcgag gtgcacaccg gccaacacgg tgtcgaggtc atcgagcgac
     4441 cggatgccga ttgcctccac gtcgagcagc actgaggtgg agccccgctc gagttcatcg
     4501 agcaccgtgg cgttggcggc gtccgggccg tcgtcagcca ccagggcccg cacgtcccac
     4561 ccgttggtcg tccgtcccgc agccgatgat ccacgggtcc ggtcgccgga acccggaagt
     4621 ccgaatcgat cgtcggagcc gttcggatct cggtcggcgt ccggcgaata aacgggggcg
     4681 atctcgatgc cgtcggccgt gatggtggcc agcgacgcca gcgtgcggcc ctgcagcccc
     4741 gcctcggcga gggccaccca ttcggcgcgg tcaaccgtga cgaagccgtc agtcgacagg
     4801 gcgtgcggat ccatgcgcag atggtaggtg acggtccgtc aggtcctcgg ggccgtgtga
     4861 ctcatgacct gcctccaacc cggtcttatg gccgtggccc ggtctgcgtt cgccgacggc
     4921 tactcgctgg ccatcctggt cggagccacc atgctgatct cagcgtcagc cgtgatcctg
     4981 cgctggtttc cccgcgactg atcattcaac caagggtccc tgaacaacag gttcctcagg
     5041 gaccggttcc tcagagacca ttcacacctg cgaggctcgg tgccatgcgc atctccacca
     5101 gcctcaacta cgccaccgac ccccagaccg cggccgctca ggctcgggaa ctggaagcgg
     5161 ccggcgtcga ccgtatctgg atccccgagg cctacggctt cgatgccgta agcctgctcg
     5221 gctacctggc agctagcacg tcaaccgtcg aactgggcag cggaatcctc aacacgtaca
     5281 gccgcacccc ggccctcttg gcccagacgg ctgccggtct ggatgcgctg tccgagggcc
     5341 gcttcgtgct cgggttgggg gcctcaggcc cccaggtcat cgagggcttc cacggtatgc
     5401 cctatgccaa gcccctgacc cggatcaagg agatcatcga gatctgccgc tcggcgtggc
     5461 gccgcgaacc cctcgtctac gacggcaacg tgttcaccct tccgctgccg cccgaccagg
     5521 gcaccggcct cggcaagccg ttgaagatca ttaaccatct gaagcgcgcc gagatcccga
     5581 tctacattgc cgccctcggc cagaagagtg tcgaagagac cgctgcgtcg tgcgagggct
     5641 ggctgccgtt cctcgtctac ccggagcgca tggcccaggt gtggggcgac gcggtaaacg
     5701 cagggctcgc ccggcgcgat gcggcgctcg atgacttcga cgtggtggcc ggtggcctag
     5761 tggccattgg cgacgatgca gctcagtacc gcgacctagg ccggcccatg gccgctcttt
     5821 acatcggtgg gatgggcgcc cgcgggaaga acttctacaa cgacgtgtgc cgccagtacg
     5881 gcttcgccga cgaggcggcc gccgtccaag acgcctacct ggacgggcgc aaggaggagg
     5941 ccgccggcct gctccccgac gagctcatcg agaacacgtc actgtgtggc gacgaggcct
     6001 acgtggtcga ccgtctggcc gcctacaagg acgcaggcgt gacctcgctg aacgtcacac
     6061 cgatcggtgg cgaagccgcc accgtgctgg gtcgcctccg agagctcgcc gaacacgcct
     6121 gatcaccgtc ggctgtccgt ggggtcgagc tttaccccgg ccagcagggc accggtcatc
     6181 cggttcgccc cttcggccat caggaagttg cccatgaggc gccgtggcgt ccggacatga
     6241 cgggtccccc gttgggtagc cgccaccacc ttgcgggcca gccgatccgg gtcggcaatg
     6301 gggagcatcc ggacggcgtt cattcggtcc agcaccttct ggccgctcgg tgacgtggac
     6361 tccacggcct cccacatgcg ggtggctacc ggccccggcg ccacggtggt cgtgccgatc
     6421 gacgtcgcct tgagttccag ggtgagcgcc cgcacgaagt tggatatccc tgccttggtg
     6481 gcgcagtagg tggccatggt cgggaacccg gccgtgccgg cgatcgacga caggaacacc
     6541 aagtgccccc gaccgcgttc cagcatctga ggcagaacat gtcgggttag gaccatgggc
     6601 gcctcgaggt tcagccgggt ggtggcccgg atgaccgccg ggtcgatgac cgccgccatg
     6661 tcgatggtct ccatgcccgc gttgttgacc agcacgtcga ccggtccgag gtcggcctcc
     6721 acgcccggga tgaaatcctc gacggctgcc gcgtcggtca ggtcgacggc cacggcgtga
     6781 ccgcccacct cggtggccac cgcatccaac tcgtctgacg gacgggcggc caccaccacg
     6841 ttggcaccgg ccgcagcgta ggcccgggcc agtgaggccc cgatcccctt cgaaccgccg
     6901 gtcaccagta cccgtgcgcc attcagatcc atgttcctcg tcctgtttcc gtcgtcccct
     6961 gatcgggccc tttatcgacc gtaatcccca ttccggtccg gctttccagc cgaccactca
     7021 ccacgggtac ggtcgcccgg tgccccccga aatcgatctg atcaaaccgt tcaccgtgtc
     7081 gatcaccgac gaggcgatcg acgacctgag acgccgtctg gccgacaccc gttggcctga
     7141 ccagattccc gacaccggct gggattacgg ctgtgaccaa cgctggctgc gtgatctggc
     7201 cggctggtgg gccgatgggt tcgactggcg ggccgccgag gctcggatca acgcctttga
     7261 gcaactggtc accactatcg acggccagca gatccacgcc atccaccacc gatctcccga
     7321 acccgacgcc cgacccctgc tgctgtcgca cggctggccc ggctcgatcg tcgaatttct
     7381 cgaggtcctg ggtccgctga ccgacccggc ctcccacggt ggagaccccg ctgacgcctt
     7441 tcacgtggtc gccccgtcgc ttcccggcta cggctggtcg ggcccgacct ccgaacgggg
     7501 ctgggggccc gaccgcaccg gacgtgcctt cgccgcgctc atggcccggc tgggctacga
     7561 ccgctacggc gtccaaggcg gcgactgggg gtcgatcatc tcccagcacg tagcaggcca
     7621 tgctccggac cacgtgaccg gctgccacct gaacatggtc gccgcctttc cccctggaag
     7681 ggacgacgat ctggccgaca tcacgccggc cgaacagcag cacctcgacc gggtcgcctg
     7741 gtaccagaag gaggacagcg gctacttcga gatccagcgc acccgtcccc agacggtggg
     7801 tgccggcctc cacgactcgc cggtcgggct gttggcctat atcggcgaga agttccacgg
     7861 ctggaccgac cacgatggcg atgcactgga cgtcgtcgac cgtgaccaac tgctggctaa
     7921 cgtcgccacc tactggttca ccgggaccat cacatcgtcg acccgcttct atttcgagtt
     7981 cgggaaggac ctggcggctg ggaagctccc gccgcccaac cccgatgttc cgctcggcgt
     8041 ctcggccttc cccatggagc tcatggtggg tcggcgccgc tgggtggagg ccgaccgcaa
     8101 cgtcaccttc tggcgcgagc acgatcgcgg cggccacttc gccgcgatgg agcggcccgt
     8161 cgaactggtc gccgatctcc gcgaattctt ccgagggctc taatgggcac tgaagccctg
     8221 agaattaccg ccgccgacgg gatctcgatc gcggtggatt catcgggcga tgccggggcc
     8281 gcgggccggc cgcccatcgt tgccacccac ggctgggcca acgaccgctc ggtctggacg
     8341 cccctcgtcg gggaactcgt cggagaaccg gccggtgggc atcaggtcgt gacctgggac
     8401 ctcaggggcc acggcgacag cgatgctcca ccgccgggcg cctactcgcg gaaacatgtg
     8461 ctggccgacc ttgccgccgt gcgcgatcac gcggtcggct ctggcggcgg ctcggccatc
     8521 ctcatgggcc acagcctcgg cggcttcctg tgcctagcgc acgccgtgga tcatcccgac
     8581 gaggtggccg gactggtgct ggtggccacc gggccgggct tccgcaaggc tgaggcccgc
     8641 gaacagtgga acgagtcggt tcgcgagtcc gccgtcaaga tcggagtgcc tccggggtcc
     8701 gaggagatct ccatgcacca cgactcgtac gtcatcgacc acctggccga gatccaggtg
     8761 cctgtgctgg tcctactggg tgagcacgat aagcgcttcg ccgcgtcggc cagcctcttc
     8821 gaacgggatc tcgacgtgcg cgagtcggta gtcgttccgg accagggaca catggtccac
     8881 gtgaaggcgc ccgccgagtg cgcggcggct attcgacact tctttgctga tctgacaaga
     8941 accacgacct gaactcatca acacgaggcc agtgcgcaag tcggacccgt gggcgcgatg
     9001 atcgactcat gatggccaac gaccgacaga tcg
//
LOCUS       DASCMR010000255         1807 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001235111, whole genome shotgun sequence.
ACCESSION   DASCMR010000255 DASCMR010000000
VERSION     DASCMR010000255.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1807)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1807)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1807
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001235111"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..583
                     /locus_tag="QGG16_06080"
     CDS             <1..583
                     /locus_tag="QGG16_06080"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF017864.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HJP24876.1"
                     /translation="TPDQTHNNCSGKHVGFLTVLRHLDLPLDGYLDPSHPLHADHVTP
                     ALAEACGVDLDSQVPGIDGCGIPVWSVPLDGLAGAWAGLGSAAANAPATRLLDAMRAE
                     PFHVAGSDRTCTRIIRAASGSAVVKTGAEGVFCAALPASGLGLGLKVRDGARRAADAA
                     VLHLLTDLGCLPDDGPELLRNRAGTIVGQVRVT"
     gene            705..1622
                     /locus_tag="QGG16_06085"
     CDS             705..1622
                     /locus_tag="QGG16_06085"
                     /inference="COORDINATES: protein motif:HMM:NF005861.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJP24877.1"
                     /translation="MERTSMGSCDGRVVIVTGAGRGLGRAHALAFAAEGAHVVVNDLG
                     VGREGQDPDAAVSPAHEVVAVIEAMGGQAIVDGADVADWDQAESMVARAVDTWGRLDT
                     LVCNAGFLRDRMLANMGEDEWDSVTRVHLKGHFAPARHAIAHWRERSKGGEEVAGRVV
                     MTSSGAGLMGSIGQGNYAAAKAGIALLVVQAAAEWGRYGVLVNGVAPDARTRMTEGVF
                     YGDAPDNAWDEKDPANVSPLMVWLGSEACDVTGRVFEATGGQLNVCDGWQHGPVVSVG
                     ERRFTVDEVGEAVHRSIAEGPEPAPVFGS"
BASE COUNT          261 a          560 c          682 g          304 t
ORIGIN      
        1 cacaccggac cagacgcaca ataactgctc tggcaagcac gtcggcttcc tcaccgttct
       61 ccgccacctc gacctgccac tggacggata cctggatccc tcccatccgc tgcatgccga
      121 tcacgtgact ccggcgctgg ccgaggcttg cggggtcgac ctggacagcc aggttcccgg
      181 catcgacgga tgtggtatcc cggtctggtc cgtgcccctc gatggccttg ccggcgcctg
      241 ggccgggctc ggttcggcgg cggccaacgc accggccacc cgcctgttgg acgccatgcg
      301 tgccgaaccg ttccacgtgg ctggtagcga ccggacctgc acccggatca tccgcgcggc
      361 gtcgggctcc gccgtggtca agaccggcgc agagggcgtg ttctgcgctg ccctacctgc
      421 cagtgggctg ggcctggggt tgaaggttcg ggacggcgcg aggcgggccg ccgatgcggc
      481 agtcctccac ctgctgacag atctgggatg cctcccggac gatggccctg aactgctccg
      541 caaccgggcc ggcacgatcg tgggccaggt tcgcgtgacg tagttgcccg taccggatta
      601 cccctggcag gaccaccgta tggctggcct gaaggctctg ttccctaggg tgggctccct
      661 agggtggcgg gctgaagacg acggagatcc gagggaccgc ttcgatggag aggacttcaa
      721 tgggcagttg tgacggacgg gtggtgatcg tgaccggagc cggtcgtggt cttgggcggg
      781 cccatgccct ggcctttgcg gctgagggcg cccatgtggt ggtcaacgac ctcggggtgg
      841 gacgcgaggg acaggacccc gatgcggccg tcagcccggc ccacgaagtg gtggccgtca
      901 tcgaggccat gggtggtcaa gccattgtcg acggagcgga cgtagccgac tgggatcagg
      961 ccgagtccat ggtggcccgg gccgtcgata cgtggggccg cctcgacacg ctggtctgca
     1021 acgccgggtt ccttcgggat cgaatgctgg ccaacatggg tgaggacgag tgggactcgg
     1081 tgacccgggt ccacctgaag gggcacttcg ccccggcccg tcatgccatt gcccactggc
     1141 gcgagcggtc caaaggcggt gaggaggtgg ccggtcgggt ggtcatgacg tcgtccggcg
     1201 cgggcctgat gggcagcatc gggcagggca actatgcggc ggccaaggct gggatcgcct
     1261 tgctggtcgt ccaggcggcg gctgagtggg gccgttacgg ggtgttagtc aacggggtgg
     1321 cccccgatgc gaggacccgc atgaccgagg gcgtgttcta cggcgatgca cctgacaatg
     1381 catgggacga gaaggacccg gccaacgtgt cacccctaat ggtctggttg gggagcgagg
     1441 cttgtgacgt gaccggccgg gtcttcgagg ccaccggtgg ccagttgaac gtgtgcgatg
     1501 gatggcagca cggccccgtg gtctcggtgg gggagcgtcg gttcaccgtc gacgaggtgg
     1561 gcgaggctgt acaccggtcg atcgccgagg gccccgagcc ggcgcccgtc tttggaagct
     1621 gattgccggc acctgagggt ccaaacggtg gttgaccggg cggctatcag gacgcccgtt
     1681 cggcgtcggc tccccgggtg agggcctcgt caaggagttg gcgtgcggag tcgcggtcga
     1741 cgcccagttg gcggacctcg aaggcgaagc ggtcggcggc cgcggccagg cgttcgcggc
     1801 gctgtcg
//
LOCUS       DASCMR010000256         3036 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001236975, whole genome shotgun sequence.
ACCESSION   DASCMR010000256 DASCMR010000000
VERSION     DASCMR010000256.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3036)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3036)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3036
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001236975"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..232)
                     /locus_tag="QGG16_06090"
     CDS             complement(<1..232)
                     /locus_tag="QGG16_06090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxoguanine deaminase"
                     /protein_id="HJP24878.1"
                     /translation="MTSDTADLVVAGADLVVTMNEDRREIPGGWVAITDGFVDAVGGP
                     GEEPTADRRIDASGCLVTPGLVNTHHHIYQNLT"
     gene            complement(473..1522)
                     /locus_tag="QGG16_06095"
     CDS             complement(473..1522)
                     /locus_tag="QGG16_06095"
                     /inference="COORDINATES: protein motif:HMM:NF019474.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJP24879.1"
                     /translation="MTNEPTTELRTSTDAIADGRPTGKRGATMRLWSDEIEAIRAEMA
                     SRRSVMDEVNLLATEVEALADPLEEAAAHRAAVDAHTSTVETSPLAEDRRIETPGGRL
                     ALRVFQPEGRARGVYLHFHGGGWFLGSPRMSERSNEDLAHRHGLVVVSVDYRLAPEHP
                     YPAAPDDCLAAATWLLDGGLAEFGFDTMLVGGESAGAHLALVTALRLRDRLAAIDRVQ
                     GLNLVFGVFDANGTPSQFGNDGGPDLLSPRFCRLMVDLFTPGMGSEDRRLPDISPVNA
                     DLTGLPSTLISVGTGDHLLDDSLLLAARMAATDSPVDLAVYPDAPHGFTLLPSAMATA
                     HADRQAAWIEARLDA"
     gene            complement(1519..1770)
                     /locus_tag="QGG16_06100"
     CDS             complement(1519..1770)
                     /locus_tag="QGG16_06100"
                     /inference="COORDINATES: protein motif:HMM:NF024950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJP24880.1"
                     /translation="MTGRLEGLVVIISGAARGQGAAEATLFATEGAQLVLGDVLRDEV
                     ANLAAFLASSESSYMTGGELTIDGGSTAGPAPRYDWKPE"
     gene            complement(1767..2981)
                     /locus_tag="QGG16_06105"
     CDS             complement(1767..2981)
                     /locus_tag="QGG16_06105"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HJP24881.1"
                     /translation="MKFSLIYEAQTADPTREGDHRVIDEIMEQALLAEELDFDVIWAV
                     EHTGLTMYAHMSAPETFLAYLAGATSRIGIGHGVICLPPRMNHPVKVAERCAMLDILS
                     GGRLHVGFGKGATEQEAGTFGYRKSDLAPILDEVMPLVPRYWVEDDVEFHGDFIDVPP
                     RTVHPRPLQDPHPPIYQACTHTDTLVDAGHRGIGALVLGFGGPDQIAEKNAVYRRAFA
                     ERDPADQVGTRPTEHLAALCPTIVLDDAAEARRIGIRGQRFFMEAIGHWASDGTTPLP
                     DPDTWSDDPSLGPTGDQSGDRATDQVVHDDSLIVEASIGSEKVTMDLAEAGMSQDNPS
                     HGYGDVDDCIDYVGRLFDAGADEILFLCQMGTVPQEAQMETVRRIGERVIPHFRAGGD
                     RRADPRLVKVSA"
BASE COUNT          477 a          922 c         1117 g          520 t
ORIGIN      
        1 gagtcaggtt ctggtagatg tggtggtggg tgttcactag cccgggggtg acgaggcatc
       61 cgctggcgtc gatgcggcga tctgcggtcg gttcctcgcc cggtccgccg actgcgtcga
      121 cgaatccgtc ggtgatggca acccacccgc cggggatctc acggcggtcc tcgttcatag
      181 tgacgacgag atcggctccg gccacgacga gatcggcggt gtcactggtc acggactgcc
      241 tcctataaca cccgttaatc cttgcagccc atagaagcgc ggtgatgcct ggattgcttc
      301 aggattgcac agaatgcaca ccaccagacg gacacaggcg tacccgtcag acatgcatcg
      361 ttgaatccac gggcactgcg gtccagatga acgtcctgga cagatttctg tgatctgggg
      421 gaccgaaggt cgggagttca aatctcggca gcccgacaac aagaatcgca ggtcaggcat
      481 cgagtcgagc ctcgatccag gcagcctgtc ggtcggcgtg tgcggtggcc atcgccgagg
      541 gcaacagggt gaacccgtgg ggtgcatcgg ggtacacggc gaggtccacc ggggagtcgg
      601 tggcggccat ccgggcggct agtaggagcg agtcgtcgag caggtggtca cccgtgccca
      661 ccgatatgag agtggacggc aggccggtca gatcggcgtt gaccggtgag atgtcgggga
      721 ggcgtcgatc ctcggacccc atgccgggag tgaacaggtc gaccatgagg cggcagaatc
      781 ggggggagag gaggtcgggt ccgccgtcgt tgccgaactg gctaggtgtg ccgttggcat
      841 cgaacacgcc gaagacaagg ttcagcccct ggacgcggtc gatggccgcg aggcggtcgc
      901 gcagtcggag tgcggtgacc agggcgaggt gggcgccggc cgactcgccg ccgaccagca
      961 tcgtgtcgaa gccgaactcg gcgaggccgc cgtccagcag ccaggtggcg gcggccaggc
     1021 agtcgtcggg ggctgccgga tacgggtgct cgggtgccag tcggtagtcc acgctgacca
     1081 caaccaggcc atggcgatgg gccaggtcct cgttggagcg ttctgacatc cgtggcgagc
     1141 cgaggaacca gccgccaccg tggaaatgga ggtagacgcc ccgtgcccgg ccctcgggct
     1201 ggaacacccg cagggcgagg cgtccacccg gagtctcgat ccggcggtcc tcagccaacg
     1261 gtgaggtctc gacggtcgac gtgtgggcat cgacggccgc gcggtgggcc gccgcctcct
     1321 cgaggggatc agccagggcc tccacctccg tggccagtag gttcacctcg tccatcacgg
     1381 accgccggga agccatctcg gcacgtatgg cctcgatctc gtcgctccag agtctcatcg
     1441 tggcacccct cttaccggtg ggccgcccgt cggcgatggc atcggtgcta gttcgcagtt
     1501 cggtggtggg ctcgttggtc attcgggctt ccagtcgtat cggggggcgg ggccggcggt
     1561 cgagccgcca tcgatggtca gctcaccacc ggtcatgtac gagctctcgg atgatgcgag
     1621 gaaggcggcc aggttggcca cctcgtcacg gaggacgtcg ccgagcacca actgggctcc
     1681 ctcagtggcg aacagggtgg cctcggcagc tccctgtccg cgggcggcgc cggagatgat
     1741 gaccaccagg ccttcgagtc gtccggtcat gccgagacct tgacgaggcg ggggtcggcc
     1801 cgtcggtccc cgccggcccg gaagtggggg atgacccgtt caccgatgcg gcggacggtc
     1861 tccatctgtg cctcctgggg caccgttccc atctggcaga ggaacaggat ctcgtcggca
     1921 ccggcatcga agaggcgccc cacgtagtcg atgcagtcgt cgacgtcgcc gtagccgtgg
     1981 ctcgggttgt cctgggacat gccggcctcg gccagatcca tcgtgacctt ctcggatccg
     2041 atggacgcct cgacgatcag ggagtcgtcg tgcacgacct gatcggtggc ccggtcgcca
     2101 gactggtcgc cagtcgggcc cagcgatggg tcgtcagacc aggtgtctgg gtcggggagt
     2161 ggggtggtgc catcgcttgc ccagtggccg atggcctcca tgaagaaccg ttggcctcgg
     2221 atgccaatgc ggcgagcctc ggcggcgtcg tcgagcacga tggtcgggca gagggctgcc
     2281 aggtgttcgg tgggccgggt gccgacctgg tcggccggat cgcgctcggc gaacgcacgg
     2341 cggtagacgg cgttcttctc ggcgatctgg tcaggtccac cgaagccgag gacgagggcg
     2401 ccgatccccc ggtgtccggc atcgaccagc gtgtcggtgt gggtacacgc ctggtagatg
     2461 ggcgggtgcg ggtcctggag aggccggggg tggacggtcc ggggtgggac gtcgatgaag
     2521 tcgccgtgga actcgacgtc gtcctcgacc cagtagcggg gcacgagagg catgacttcg
     2581 tcgagtattg gggcgaggtc cgactttcgg tagccgaacg tgccggcctc ctgttcggtg
     2641 gcgcccttgc cgaatcccac gtggaggcgg ccgcccgaca ggatgtcgag catggcgcag
     2701 cgttcggcca ccttgaccgg gtggttcatc cgcgggggaa ggcagatgac gccgtggccg
     2761 atcccgatgc gggacgtggc tccggccagg taggccagga acgtctcggg agccgacatg
     2821 tgggcgtaca tggtgagtcc ggtgtgctcc acggcccaga tgacgtcgaa gtcgagttcc
     2881 tcggccagca gggcctgctc catgatctcg tcgatcaccc ggtggtcgcc ctcgcgggtc
     2941 gggtccgcgg tctgggcctc gtagatcagg gagaacttca ttactgctcc tcgccggttg
     3001 atggatggat gtggccagtg gccacatttg gatgtg
//
LOCUS       DASCMR010000257         2220 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001248028, whole genome shotgun sequence.
ACCESSION   DASCMR010000257 DASCMR010000000
VERSION     DASCMR010000257.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2220)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2220)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2220
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001248028"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2220)
                     /locus_tag="QGG16_06110"
     CDS             complement(<1..>2220)
                     /locus_tag="QGG16_06110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24882.1"
                     /translation="APLGRLAVLVPVLAVATVVGALYGMATGRLRHARGLLAAWTWNL
                     RRIGSARRLAGAGPAGRGSTSAGYQGQRASWWLAFRRVATGRDLAGDDDRSEGLRRLN
                     GAFGAVFGPGGLAMMIAAVVLGFGSRSLVTDGMPVVGRLQRLPEAPGALVDSWWAGWR
                     STGMGASGSGPDGLALVGLLVDRWPGSADSAWTVLILGAFAVGALGVWRLVRPVGGGR
                     SRAVAVLVYLAVPIPYDALRVGRLAPLAAYAVLPWLARRLAGAQAMAPYGVRGGDPGP
                     GTRLRGLWADVVMTGLALAAVVAVDPVLLVPACLIVVGLAAGTVLSGSLDGLVRLTMV
                     VGGGTMLAAVVHLPAAVVVAGRDGAGWSGWWGSASGGGWEATGSIGLSGVLALAPGAD
                     GPTAVTGLFVLPLLALCTARGRHLSVVVRAWFVAAAGAVVLVSVDQGWLGVEDSFLRS
                     VDPAVLLVPVALGLAWVSAAGVAGLGADLAHLATQVHVGPMARVVRNGLLGAVVISLA
                     IGALPVLTGSFAGDWGVPRADLTVALPGAGARLADGDTVPGGDARVLWIGDPLVLPAA
                     GIPLSWSDRSSGVPSDRFDRLALAVTDGRPDLSDQWSPGETTAMVALRDAVGSALDGA
                     THRLGADLGRWGVARVVVVERSAPVPGPGVERPVPGRLTEVLARQLDLERVEAVNRSV
                     TVYRNTAVEAPFSVVRDRNRRVVPAGVTRRSLTRWVVEVPADGALRWMVGPDDRWEV"
BASE COUNT          419 a          897 c          688 g          216 t
ORIGIN      
        1 tcgacttccc agcggtcgtc gggacccacc atccaacgca gggcgccgtc cgccggaacc
       61 tcgaccaccc accgggtcag cgaacggcgg gtcaccccag cggggacaac ccgccggttc
      121 cggtcccgaa ccaccgagaa cggggcctct accgctgtgt tgcgatacac ggtcaccgac
      181 cggttcaccg cctcgacgcg ctccaggtcg agttgtcggg ccagcacttc ggtgagacgg
      241 ccgggtaccg gtcgctcgac gcccgggccg gggaccgggg ccgatcgctc gacgaccacc
      301 acccgggcca ccccccatcg gcccagatcg gcccccagtc ggtgggtggc accgtcaagc
      361 gcggaaccca cggcatctcg caacgccacc atcgcggtcg tctcacccgg cgaccactgg
      421 tcagacaggt ccggtcgccc gtcggtcacg gcaagcgcca ggcggtcgaa tcgatccgac
      481 ggcacgccgg acgaacgatc gctccacgaa agcgggattc ccgctgccgg aagcacgagt
      541 ggatccccga tccacaggac acgggcatcc ccaccgggca ccgtgtcacc atcagccaga
      601 cgggccccgg ccccgggcag cgccaccgtc agatcggcac gcggcactcc ccagtcgccg
      661 gcgaacgaac cggtcaggac cggcaacgcc ccgatggcca ggctgatcac cactgctcct
      721 agcagcccgt tgcgaaccac ccgggccatt ggacccacgt ggacctgtgt ggccaggtgc
      781 gccaggtcgg cacccagccc ggccaccccg gctgccgata cccaggcaag gccgagggcc
      841 accggcacga ggaggaccgc cggatccacc gaccggagga acgaatcttc gacccctagc
      901 caaccctggt ccactgatac cagcaccaca gcccctgcag cggccacgaa ccaggctcgg
      961 acgaccaccg agaggtgccg cccccgcgcc gtacagaggg ccaacagcgg aaggacgaac
     1021 aaccctgtga ccgctgtcgg cccgtcggct cccggcgcca gggccagaac cccggagagg
     1081 ccgatcgatc ccgtcgcctc ccaaccgccg cccgatgccg atccccacca accgctccaa
     1141 cctgcaccgt cgcgtcccgc gacgactacg gccgccggca ggtggaccac ggcagccaac
     1201 atcgtcccac cgccgaccac catcgtcagc cgaaccagcc catcgaggct ccctgacagc
     1261 accgtgccgg ccgccaaccc cacgacgatc aggcaggcag gaaccaacag gactggatcc
     1321 acggcgacta ctgcggccag ggccaggccg gtcatcacca cgtcggccca caggcccctc
     1381 agacgggtgc ctgggcctgg atcgccgccc cgaacgccgt agggagccat ggcctgggct
     1441 ccggccagtc ggcgagccaa ccagggcagg acggcatagg cggccagagg ggccaggcgt
     1501 ccgacgcgaa gtgcgtcgta gggaatcgga accgccagat ataccagcac ggcaacggcg
     1561 cgtgaccggc cgccgcccac cgggcgtacg aggcgccaga cgccaagcgc ccccacggcg
     1621 aacgccccga ggatcaggac ggtccacgcg gaatccgccg aacccggcca ccggtcgacc
     1681 agcagaccga cgagggccag accatcaggc cctgatcccg aggcccccat ccccgtggat
     1741 cgccaaccgg cccaccacga gtccaccagg gctcccggtg cctccggtag ccgctggagg
     1801 cggccgacga ccggcatccc gtcggtcacc agagaacgag aaccgaagcc cagaaccact
     1861 gcggcgatca tcatggccaa cccgcccggg ccgaacaccg ccccgaaggc gccattcagc
     1921 cgccgaagcc cttcggaccg gtcgtcgtct ccagccagat cccgcccggt ggctacccgt
     1981 cggaacgcca accaccacga ggcccgctga ccctgatacc ccgcgctagt cgagccccga
     2041 ccggccgggc cagccccagc gagtcgtcgg gccgagccga tgcggcggag gttccaggtc
     2101 caggcggcga gcaacccacg ggcatgccgt agccgtccgg tggccatgcc gtacagggcc
     2161 ccgaccaccg tcgccaccgc cagcacgggg accagcacgg ccagtcgacc gagaggtgct
//
LOCUS       DASCMR010000258         4052 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001261289, whole genome shotgun sequence.
ACCESSION   DASCMR010000258 DASCMR010000000
VERSION     DASCMR010000258.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4052)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4052)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4052
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001261289"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..706)
                     /locus_tag="QGG16_06115"
     CDS             complement(<1..706)
                     /locus_tag="QGG16_06115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HJP24883.1"
                     /translation="MASEVRAAMVQTGWTGDKESMIELHEKYLAEAAEAGARVMCFQE
                     LFYGPYFCQVQDAAFYDYAEAIPDGPTTKRFQELAAKYGMVLILPMYEKEQEGLLYNT
                     AAVIDADGSYLGKYRKTHLPQVKGFWEKFYFRPGNLGYPVFETAVGRVGVYICYDRHF
                     PEGWRALGLNGAQMVFNPSATSRGLSSYLWKLEQPASAAANMYFVGAINRVGIEDLGE
                     NDFYGTTYFVNPRGQFV"
     gene            827..1879
                     /locus_tag="QGG16_06120"
     CDS             827..1879
                     /locus_tag="QGG16_06120"
                     /inference="COORDINATES: protein motif:HMM:NF013775.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HJP24884.1"
                     /translation="MVGLGGTLDDTGGLLDWPALQVWLASSSAPGNGPVVAFQELAGG
                     TQNHLFHLTREDGTAMVLRRPPRHPRPNSNETMLREARVLAALSGSDVPHPAFLAVCD
                     DPSVIGTCFHLGEVVDGFNPGSGLEGRYDDPRWQHAFGLSMVDAIAALAAVEPSAVGL
                     GDLGRPVGWLERQVPRWRSLLESYAETEGYAGPNLPDVDRVGIWLDEHRPREATIRII
                     HGDFHLANVMARRDRPEVAAIVDWELTTSGDPRLDIAWLLATSQGIGSFHASAPGFPH
                     WRELADRYADRTGLPLEDLSWWWTLACYKLGIILEGTNARAAAGRAPAETGRDLHDRA
                     VQLLTMAGRLVDGIVL"
     gene            complement(1930..3177)
                     /locus_tag="QGG16_06125"
     CDS             complement(1930..3177)
                     /locus_tag="QGG16_06125"
                     /inference="COORDINATES: protein motif:HMM:NF014680.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HJP24885.1"
                     /translation="METVLVLVAVFSVLIAVVTVVWATRRPAPVGEVEPSAPLLDAAA
                     LVAQIGAEVRAQVGTQVAETAASALKHNNDQFLTLATERMGAVHEQTKGLLDPFSEQM
                     RKLGETVGNLQTSHEKEKGAVGALTLQLGRQMTELQSTTTTLTEALRSSSARGAWGEN
                     QLRNVIELSGMEPYCDFTEQVTAENRAGERIRPDVKVRLPNGAQLFVDAKVPLDAYLR
                     AQEATDPAVVETELKAHAKALEAHVGALAGKKYWEADGEPSPEFVVLFVPGESFLADA
                     LRAEPGLLQKAMNQRVLLASPVNLLALLWAVAGGWQQARLAENARDIAELGTELYDRV
                     GTLLDHVDKTGRGLGTAIGAYNKLVGSIDDRLLPTMRKFPELGVGSDALSSPPDIEVA
                     PRDLRAGELPSAVEGAGGDETRV"
     gene            complement(3232..>4052)
                     /locus_tag="QGG16_06130"
     CDS             complement(3232..>4052)
                     /locus_tag="QGG16_06130"
                     /inference="COORDINATES: protein motif:HMM:NF024491.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HJP24886.1"
                     /translation="DVHDNFVMRWNGASERDRLHGSWSGDQPDGRTDDLVEWRPAEVP
                     LSAGATTAQIQRSVLPGLYDELPDGENAVREQYLSAIAGARDYIYIEDQVLLSRVVLV
                     ALREALDRGVLVVASVPGDPMPELAAARSHPGIAAGYEALAALGAYDGFCLSAPAVRR
                     EWGVEEVYVHAKTAVVDDMWATIGSTNLVFSSFQGDTEMNVSFWDPAGDDGVAWALRV
                     RQVDEQGGFDSSGMDGRSALARLIEVARANAAVRAAGGSWGGFACAIDPTGWAT"
BASE COUNT          699 a         1407 c         1267 g          679 t
ORIGIN      
        1 ccacgaactg gccccggggg ttgacgaagt aggtcgtccc gtagaagtcg ttctcaccca
       61 ggtcctcgat gcctacccgg ttgatggccc ccacgaagta catgttggcc gctgccgacg
      121 ccggctgctc gagcttccac aggtaggacg acaggccccg gctagtggcc gacggattga
      181 acaccatctg ggcaccgttc agacccaggg cccgccaccc ctcggggaag tggcggtcgt
      241 agcagatgta gacgccgacc cgacccacgg cggtctcaaa caccgggtac ccaagattcc
      301 cggggcggaa gtagaacttc tcccagaagc ccttgacctg ggggaggtgg gtcttccggt
      361 acttgccgag gtaggagccg tcggcgtcga tgaccgccgc ggtgttgtag agcaggccct
      421 cctgctcctt ttcgtacata ggcaggatca gcaccatgcc gtacttggcc gccagttcct
      481 ggaaccgctt ggtggtaggg ccgtcgggga tggcctcggc gtagtcgtag aaggcggcgt
      541 cttggacctg acagaaataa gggccgtaga agagttcctg gaagcacatg acccgagcac
      601 cggcctcagc ggcctcagct aggtacttct catggagctc gatcatcgac tccttatcgc
      661 cggtccagcc cgtctggacc atcgctgccc gtacttcgct cgccaccttc gcctcctaca
      721 ttctcagtgt ccgtgccgac gccacctcct cacggccgga gcaaaacttt ccaaaccgac
      781 cattgcagcg tgtcgcggtc gccgacagta gtggcaacct gaacagatgg ttggactcgg
      841 gggaacgttg gacgatacag gtgggctcct cgactggccg gccttacagg tctggctcgc
      901 cagtagctca gcgccgggca atggcccagt ggtggccttc caggaactgg cgggcggcac
      961 ccagaaccac ctcttccacc tgacccgcga ggatgggacg gcgatggtcc ttcgacggcc
     1021 gccccggcat ccccggccga acagcaacga gacgatgctt cgggaggccc gggtgctggc
     1081 cgccctgtca ggaagcgacg tcccccaccc ggcgtttctc gctgtgtgcg acgacccgtc
     1141 ggtgatcgga acgtgcttcc acctcggcga ggtcgttgac ggcttcaacc ctgggtcagg
     1201 cttggaaggg cggtacgacg acccgcgctg gcagcatgct tttggcttgt cgatggtcga
     1261 cgccatcgcg gcgctggccg ccgtggagcc gtcggccgtc gggctcgggg acctcgggcg
     1321 ccccgttggc tggcttgagc gacaagttcc ccgatggcga tctttactcg agtcgtacgc
     1381 ggagacagag ggctacgccg gtccgaacct tcctgacgtc gaccgggtgg ggatctggct
     1441 agacgagcac cgcccgcgcg aggcaactat ccggatcatc cacggggact ttcacctggc
     1501 gaacgtgatg gcccgacgcg accgtccgga ggtggcggcc attgtcgact gggaactcac
     1561 gacctccggg gacccgcgcc ttgacattgc ttggctgttg gctacctctc aaggcatcgg
     1621 ctcgttccac gctagtgccc ccggattccc ccactggcgg gaactcgcag accggtatgc
     1681 cgaccgaacg ggcctccccc ttgaagatct gtcctggtgg tggacgctgg cgtgctacaa
     1741 gctcggcatc atccttgagg gaaccaacgc ccgggcggca gccggacgcg caccagctga
     1801 gactggtcgc gatctccacg accgcgctgt ccaactcctc accatggcag gccggttggt
     1861 cgacgggatc gtgctgtgac gggtcgaggg tgaggcacca gacagcccgc cgacaggatg
     1921 gaggcacggt cagactcttg tttcgtcccc cccggctcct tcaacagctg acgggagttc
     1981 accagcccgt agatctctcg gtgccacctc gatgtcgggt ggtgagctga gcgcatcact
     2041 acccacgccc agttcgggga acttccgcat agtgggcaga agacggtcgt cgatcgagcc
     2101 gaccagcttg ttgtaggcgc cgatcgccgt ccccaggcca cgacccgtct tgtccacgtg
     2161 gtcgagcaag gtgcccaccc ggtcgtagag ctcggtgccc agttcggcga tgtcccgcgc
     2221 gttctcggcc agacgggcct gctgccagcc cccagccact gcccacaaca gggccagcag
     2281 gttcaccggc gaggccagta ggacccgctg gttcatggcc ttttgaagga gacccggctc
     2341 ggcacgcagg gcgtcagcca gaaacgactc accgggcacg aacaacacga cgaactcggg
     2401 agacggctca ccgtccgcct cccagtactt cttcccagct agggcgccga cgtgtgcctc
     2461 gagcgccttg gcatgggcct tgagctcggt ctcgaccacc gccggatcgg tggcctcctg
     2521 ggcacggagg taggcgtcca gcggaacctt ggcatctacg aagagttggg caccgttggg
     2581 gagacgaacc ttcacatcgg gccggatccg ctcaccagcc cgattctcag ccgtgacctg
     2641 ctcggtgaag tcgcagtacg gctccatccc ggacaactcg atgacgttcc ggagttggtt
     2701 ctcgccccac gcacctcgag ccgacgagga acggagcgcc tcggtcagcg tggtggtggt
     2761 ggactgcaac tccgtcatct gacggcccag ctgcagggtc agagcaccta ccgccccctt
     2821 ctccttctcg tgggaggtct ggaggttgcc tacggtctca ccgagctttc gcatctgctc
     2881 gctgaacgga tccaacaggc ccttggtctg ctcatggacc gctcccattc gctcggtggc
     2941 cagcgtcagg aactggtcgt tgttgtgctt cagggcgctg gccgccgtct cggccacctg
     3001 ggtcccgacc tgggctcgga cctcggcccc gatctgggcg acaagcgccg cggcatccag
     3061 caacggggcg gagggctcca cctcgcccac cggcgcgggt cggcgagtgg cccaaaccac
     3121 ggtcacgacc gcgatgagaa cggagaagac ggcaacgagg accagcacgg tttccatgcg
     3181 tcgaacgtag acgcgccctg tgacagcggc gcggagggcc cgtttctcta ctcaggtagc
     3241 ccacccagtg gggtcgatgg cgcaggcgaa gccgccccaa gaacctccgg ccgcccggac
     3301 cgcagcgttg gcccgggcca cctcgatgag acgagccagc gcggaccgtc cgtccatccc
     3361 cgacgagtcg aagcccccct gctcgtccac ctgtcgtacc cgcaacgccc aagccacgcc
     3421 gtcatcaccg gccgggtccc agaacgacac attcatctct gtgtcgcctt ggaacgagct
     3481 gaacaccagg ttcgtcgaac cgatggtcgc ccacatgtcg tcgaccaccg ccgtcttggc
     3541 atgtacgtac acctcctcga cgccccactc ccggcgcacc gctggagccg acaagcaaaa
     3601 cccgtcatag gccccgaggg cagccaaagc ctcgtaaccc gcggcgatac ccggatggga
     3661 gcgcgccgca gccagctcag gcatcggatc gccgggcacc gacgcaacga ccagcacccc
     3721 ccggtccagc gcctcacgca gcgccaccag aacgacccgg ctgagcagca cctgatcctc
     3781 gatgtagatg tagtccctcg ccccggcgat ggccgacagg tactgctccc gcacggcgtt
     3841 ctcaccatcc ggtagctcgt cgtacaaccc gggaaggaca ctgcgctgga tctgcgccgt
     3901 ggtcgccccg gccgacagag gcacctccgc cggacgccac tccaccaagt catcggtgcg
     3961 gccgtcgggc tgatcgccgg accacgagcc gtgcaatcgg tcgcgttcgg acgccccgtt
     4021 ccatcgcatc acgaagttgt cgtggacgtc ag
//
LOCUS       DASCMR010000259         1990 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001268973, whole genome shotgun sequence.
ACCESSION   DASCMR010000259 DASCMR010000000
VERSION     DASCMR010000259.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1990)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1990)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1990
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001268973"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..366
                     /locus_tag="QGG16_06135"
     CDS             <1..366
                     /locus_tag="QGG16_06135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24887.1"
                     /translation="EKVSGDPEANAEARENLMRPIEIPILGAAGVAVLVLAVSRVLLA
                     SSVTGAVWVATAVGLAIFGLAVLISRRPEMPRSTVRVILFAGITVVLILGIVTAVSGE
                     REFHHKGGGVHQDDAEADH"
     gene            405..1568
                     /gene="coxB"
                     /locus_tag="QGG16_06140"
     CDS             405..1568
                     /gene="coxB"
                     /locus_tag="QGG16_06140"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR02866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HJP24888.1"
                     /translation="MVALAIGIPLALTGCAADAPLDTLEPQGPISRSIDSLANPVFLV
                     AGIVFVIIFGVSGIIWWKFRDDHSTDEFPHQLHGHFRAEIGWTIGPAVLMAVIAVFTL
                     LSLFDLNSEDRTDIVISVDGERTSWDPQVVVVGQQWWWEFRYYFDGLDGLDLSDARHL
                     PPADIVAANQLVIPTGSEIGLKITSRDVIHSYWIPALNGKRDAVPGRVSPWKIEAETP
                     GVYFGQCTEFCGLSHSRMRMQTVAMDPADFQLWVDQQMQPAIEPTDGAALRGRAVFEG
                     QCARCHVVNGINDGGGADLVANAAPNLTHLMSRTTYAGGIFDLYEPDGSLDRTQLEAW
                     LRNAPAEKPAYAEGRRGMPAMGLSESQIDDVVAYLQTLGRTPAIEVIAATEVD"
     gene            1568..>1990
                     /locus_tag="QGG16_06145"
     CDS             1568..>1990
                     /locus_tag="QGG16_06145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cbb3-type cytochrome c oxidase subunit I"
                     /protein_id="HJP24889.1"
                     /translation="MSDVTELEALGGSIGVYTRPKANTGWRDWVTTVDHKKIGILYGA
                     TALFFFLIGGVEALLIRLQLATPDGTVLGADTYNRVFTMHGVTMVFIVAMPLAAAFAN
                     YLLPLQIGARDVAFPRLNALSFWVFLAGGLFLNMAWIVG"
BASE COUNT          327 a          634 c          631 g          398 t
ORIGIN      
        1 gagaaggtct ccggtgatcc cgaggccaac gctgaggccc gtgagaacct catgcgcccc
       61 atcgagattc caatcctcgg tgcggccggc gtggccgtcc tcgtgctggc cgtttcccgg
      121 gtgctgctcg cctcatcggt gaccggtgcc gtctgggtgg ctaccgctgt cggcctggcc
      181 atcttcgggt tggccgtcct gatcagccgc cgccccgaga tgccgcgttc gactgtccgg
      241 gtcatactgt tcgcaggcat cacggtcgtt ctcatcctcg gcatcgtcac cgcggttagc
      301 ggtgaacgcg agttccacca caagggtggc ggagtccacc aagacgatgc ggaggcggac
      361 cattgatccc caagtccctg cgcaggcccc cgagcccggg tcgcttggta gccctcgcca
      421 tcggcatccc gctggccctg accggctgtg ccgctgacgc cccactggac accctggagc
      481 cccaaggccc gatatcccgg tcgatcgact cgctagccaa tccggtgttt ctcgtcgcgg
      541 gcatcgtctt cgtgatcatc ttcggggttt cgggcatcat ctggtggaag tttcgtgacg
      601 atcacagcac cgacgagttc ccgcaccagt tgcacggcca tttccgggcc gagatcggct
      661 ggaccatcgg cccggcggtc ctcatggccg ttatcgccgt attcaccctt ctcagcctct
      721 tcgacctcaa cagcgaggac agaaccgaca tcgtgatctc ggtggacggg gagcgcacct
      781 cgtgggatcc ccaggtagtt gtggtcggcc aacagtggtg gtgggagttc cgctactact
      841 tcgacggcct ggacggcctc gacctgagtg acgctcgcca tctgccgccg gctgacatcg
      901 tggcggccaa tcagctggtc atcccgactg gttcggagat cggtctcaag atcaccagcc
      961 gcgatgtgat ccacagttac tggattccgg cgttgaacgg gaagcgtgat gcggtgccgg
     1021 gtcgggtctc accatggaaa atcgaggccg agacgcccgg tgtctacttc ggccagtgca
     1081 ccgagttttg tggtctcagc cattcccgga tgcggatgca gacggtggcc atggatccgg
     1141 ctgacttcca gttgtgggtc gaccagcaga tgcagccagc tatcgagccg actgatggcg
     1201 ccgcgctgcg gggtagggcg gtctttgagg gccagtgcgc tcgctgccac gtggtgaacg
     1261 gaatcaacga cggtggtgga gctgatctgg tggccaacgc tgcaccgaac ctgacccatc
     1321 tgatgagtcg aaccacctat gccggcggca tcttcgatct ctatgaacca gacggttcgc
     1381 tggaccggac ccagctcgaa gcttggctgc gaaacgcacc ggccgaaaag cccgcctatg
     1441 ccgagggtcg acggggcatg ccggccatgg gcctcagtga aagccagatc gatgacgtgg
     1501 tggcgtacct ccagaccctg ggtcggaccc cggccataga agtcatcgcg gcgacggagg
     1561 ttgactgatg agtgacgtga ccgaactgga ggccctgggc gggtcgatcg gtgtctacac
     1621 gcggccgaag gccaacaccg gctggcgtga ctgggtcacc acggtcgacc acaagaagat
     1681 cggcatcctt tatggagcga ctgccctctt cttctttctc atcggtggtg tggaggccct
     1741 actgatacgc ctgcagttgg ccaccccgga cggaaccgtg ctgggcgcag acacctacaa
     1801 ccgggtcttc accatgcacg gcgtgaccat ggtcttcatc gtggctatgc cattggcagc
     1861 agcgttcgcg aactacctgt tgcccctgca gatcggggcc cgggacgtcg ctttcccccg
     1921 tctcaacgct ctctcgttct gggttttcct ggccggtggg ctgttcttga acatggcctg
     1981 gatcgtgggg
//
LOCUS       DASCMR010000260         3011 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001276174, whole genome shotgun sequence.
ACCESSION   DASCMR010000260 DASCMR010000000
VERSION     DASCMR010000260.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3011)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3011)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3011
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001276174"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(161..469)
                     /locus_tag="QGG16_06150"
     CDS             complement(161..469)
                     /locus_tag="QGG16_06150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24890.1"
                     /translation="MARSVIERRLIEVGERLQRLWSDLAVAEEQLAHLSADATDARVR
                     ALVSETAQSGSVHRDAERHARAMERHRDDVVANIARLEAIQDDLLDRMGSDGRGVRDD
                     "
     gene            complement(497..583)
                     /locus_tag="QGG16_06155"
     tRNA            complement(497..583)
                     /locus_tag="QGG16_06155"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(547..549),aa:Leu,seq:caa)
     gene            751..1932
                     /gene="fabD"
                     /locus_tag="QGG16_06160"
     CDS             751..1932
                     /gene="fabD"
                     /locus_tag="QGG16_06160"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: protein motif:HMM:TIGR00128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HJP24891.1"
                     /translation="MIAFTYSGQGSQQPGMGASWSDHPSWELVDEASEAAGRDVTHLL
                     LTADADELRETRNAQLATFVTSMVILDAVERLGIDAAGHAGHSLGEYSALTASGALAF
                     EDAVPLVVERGEAMQVAIQKPEGTMAAVLGLDDSSVEEACSAVDGDVWVANYNAPGQV
                     VIAGDPEAVAAAGQEAKDQGAKRVTTLEVSGAFHTPFMSSARDRLSEAINSTDIRMPE
                     GIVVANVDATAHQNPATWRALMNAQLCSPVRWAQSLETLSLAGFTTFVELGPGSVLTG
                     LVKRTIKGATRLTVNTPDHLDSLLDALAAPAMAEAAGEDAEGEHLFATDRMVVSPATG
                     IFTPVADIGPGQVVAAGALLGHIGTTEVYSSFAGEFMGWLAVDTERVTASKPIAWLRA
                     Q"
     gene            1998..2723
                     /gene="fabG"
                     /locus_tag="QGG16_06165"
     CDS             1998..2723
                     /gene="fabG"
                     /locus_tag="QGG16_06165"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HJP24892.1"
                     /translation="MSDPISRVVLVTGGNRGIGLACAKAFVAAGHRVAVTCRGEAPAE
                     VSEAGILAVQCDVTDTEQVDAAFTAIEEQLGPVEILVANAGITRDGLVLRMSDDDFID
                     VLDANLIGAFRVCRRAVKRMIKGRWGRIVLVSSVVGRVGQTGQANYSASKAGLVGLGR
                     SLAKEFASRNVTVNVVAPGPILTEMLAALPDDQQAAYAEAVPLGRLGEASEIAAAVTF
                     LTSEDAGYVTGAVLPVDGGLFMG"
     gene            2848..>3011
                     /locus_tag="QGG16_06170"
     CDS             2848..>3011
                     /locus_tag="QGG16_06170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000035 - acyl binding [Evidence IEA];
                     GO_function: GO:0000036 - acyl carrier activity [Evidence
                     IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HJP24893.1"
                     /translation="MTVSEENFEKFRKCAVEVLSVEADQVTMEASFAEDLDADSLDLV
                     ELVMALEEEFG"
BASE COUNT          553 a         1000 c          950 g          508 t
ORIGIN      
        1 caccagctcg acggcatgat caccgcgccc ggtgtcgcct accacgtcgt acccctcgtc
       61 gatgagggtc tccttgaggt cgagacgaat gatggcctcg tcttcggcca ggaccacccg
      121 tactggtggc atgccgggag cgggagaggc cccgcgcgaa tcagtcatct cggactcctc
      181 ggccgtcgga gcccatccga tccagtaagt cgtcctggat ggcctccagc cgggcgatgt
      241 tggccaccac gtcatcacgg tggcgttcca tggcccgggc gtggcgctcg gcgtcgcgat
      301 gaacgcttcc tgactgagcg gtttccgaaa ccagggcccg aacccgggca tcagtcgcgt
      361 cagccgacaa gtgggccaac tgttcctcgg ccaccgctag gtcggaccag agccgctgaa
      421 ggcgctcgcc aacctcgatt aggcgtcgtt caatcaccga gcgtgccatg ggaccggcca
      481 ttgtaagaaa aacatctggt gcccggggcg ggacttgaac ccgcacgacc tttcagccag
      541 aggattttga gtcctccgcg tctgccaatt ccgccacccg ggcgaacttt ctgagcctac
      601 cggtgggccc ctgactggag acccgctccg ccacctcgcg gtaacccgtg acccaaccgt
      661 cgacgggccc ctacgatggg ccgacgcagc gggttcaatg ccccgtcacc gacggaaccg
      721 ccacccttcc gcgtcccttc gaggagaccg atgatcgcct tcacctactc cggccagggc
      781 tcccagcaac ccggcatggg ggcatcttgg tctgaccacc catcctggga actggttgac
      841 gaagcctccg aagcagcggg acgcgacgtg acccacctgc tactcactgc cgacgccgac
      901 gaactccgcg agacccgcaa cgcccagctg gccaccttcg tgaccagcat ggtgatcctc
      961 gatgccgtgg agcggctcgg catcgacgct gccggccacg cgggacacag cctcggcgag
     1021 tacagcgcgc tgaccgcgtc gggcgccctg gccttcgaag acgcagtgcc cctggtggtc
     1081 gaacgaggtg aagccatgca ggtggcgatc cagaaacccg agggcaccat ggccgccgtg
     1141 ctgggactcg atgactcaag tgtggaagaa gcgtgttcag cggtcgacgg tgacgtctgg
     1201 gtcgccaact acaacgcccc cggacaggta gtcattgccg gtgatcccga agcggtggcc
     1261 gcagccggcc aggaggccaa agatcaaggc gccaaacgag tcaccaccct ggaagtctcc
     1321 ggtgccttcc ataccccgtt catgtcttcg gcccgggatc gactcagcga agccatcaac
     1381 agcaccgaca tccgaatgcc ggagggaatc gtggtggcca acgtggatgc caccgcccac
     1441 cagaacccgg caacgtggcg ggctctgatg aacgctcaac tctgcagccc cgtccggtgg
     1501 gcgcagagcc ttgagacgct gagcctcgcc ggcttcacca cgttcgtcga actgggtccg
     1561 ggcagtgtcc tgaccggact ggttaagcgg accatcaagg gggcgacccg actaaccgtt
     1621 aacaccccgg accacctcga ctcgctcctc gacgcgctag ccgcccccgc tatggcggag
     1681 gctgctggtg aggacgctga gggcgaacac ctcttcgcca ccgaccgcat ggtggtgagt
     1741 ccagctaccg gcatcttcac tccggtggcc gacatcggtc ccggccaggt ggtagccgcc
     1801 ggggccctac tgggtcacat cggtacgacc gaggtttatt cgtcgttcgc cggcgagttc
     1861 atgggttggc tcgctgtcga cactgaacgg gtcaccgcat ccaagcccat tgcgtggctt
     1921 cgcgctcagt aatttccacc gcgcgaacgc ccgagccaag tccgcccaag aaacccagtc
     1981 aggaaccaag agcaatcatg agtgacccaa tcagtcgagt cgtactggtc accggtggaa
     2041 accgcggcat cggccttgcc tgcgccaagg cgttcgtcgc tgccggacac cgagtagccg
     2101 tgacctgccg gggagaggca ccggccgagg tttccgaggc gggcatcctc gccgtgcagt
     2161 gtgacgtgac cgacaccgaa caggtcgacg cggcgtttac cgctatcgag gaacagttgg
     2221 gacccgtcga gatcctggtg gccaacgccg gcatcacccg ggacggcctc gtgctgcgga
     2281 tgtccgatga cgacttcatc gacgtgctgg acgccaatct gatcggtgca ttccgggtct
     2341 gccgtcgggc tgtcaaacgg atgataaagg ggcgttgggg tcgaatcgtc ctggtctcgt
     2401 cggtcgtcgg tcgagtcgga cagaccggtc aggccaacta ctcggcgtcc aaggccggcc
     2461 tagtcggtct gggacgctcc ctggccaagg agttcgccag ccgaaacgtg accgtcaacg
     2521 tggtggcacc ggggcccatt ctgaccgaga tgctggctgc cctccccgac gaccagcagg
     2581 ctgcctacgc cgaagccgtg ccgctgggtc gtctgggcga agcctctgag atcgccgcgg
     2641 cagtgacctt tctgacgtcg gaggatgccg gctacgtgac cggggccgtc ctccccgtgg
     2701 atggcggcct gttcatgggg tgagtacccc tggcctgtaa atggcgacaa gcgaaacggc
     2761 ccagagtgtc gtaggccaca atccattccc ctgcggatcg ctccgctcta gggtgaggca
     2821 gttcacgatc accaatcaga acggagaatg acggtgagcg aagaaaactt cgagaagttc
     2881 cggaagtgtg cggtcgaggt cctgtcggta gaagccgacc aggtcaccat ggaggcttcg
     2941 ttcgccgagg acctcgatgc cgacagcctc gacctcgtcg agttggtcat ggcccttgag
     3001 gaggagtttg g
//
LOCUS       DASCMR010000261         3710 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001279150, whole genome shotgun sequence.
ACCESSION   DASCMR010000261 DASCMR010000000
VERSION     DASCMR010000261.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3710)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3710)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3710
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001279150"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(78..815)
                     /gene="pyrF"
                     /locus_tag="QGG16_06175"
     CDS             complement(78..815)
                     /gene="pyrF"
                     /locus_tag="QGG16_06175"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: protein motif:HMM:TIGR01740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0009220 - pyrimidine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HJP24894.1"
                     /translation="MADVESTTNRFRDSAPPYIRESLCLVLDVDDLVAARRTAAALVP
                     WFGTVKVGLELFSAAGPDAVASFVEDGFQVFCDLKLHDIPNTVGSAARVLGSSGARWV
                     TVHTAGGEAMLRSAVESMADGASRVGAETPGVLGVTVLTSDQTAGREVLEQRCDLAAS
                     TGCAGIVCAAPDLPVTDPWADQLVRVVPGIRMPGGDVHDQARVATPRDAMAAGADLLV
                     VGRAVTAAPDPVAAAVELVTHLAGRGT"
     gene            complement(808..1740)
                     /locus_tag="QGG16_06180"
     CDS             complement(808..1740)
                     /locus_tag="QGG16_06180"
                     /EC_number="1.3.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004152 - dihydroorotate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HJP24895.1"
                     /translation="MSRRTATVDLTTRIGSVVLPNPVLTASGTAGHGHELADHLDPAA
                     LGAVVVKSLHAEPWAGNPPPRVHATPSGMVNSVGLQGPGVESWLENDLPGLAATGARV
                     VASIWGRTVEEFARAAELLADAPDVVVAVEVNASCPNLEDRRALFAHSRSATTEVVDA
                     AGAAGRPRWAKLSPNTPELPDVAAAAMAAGAEAVTVANTVLGMVIDTETRRPLLGAGR
                     GGLSGPAIRPVAVRAVFDTREALGNAPIIGVGGVASADDAVQFLLAGASAVQVGTATF
                     ADPRAPARILRDLGRWCDRQGVARLDELIGAAHG"
     gene            complement(1737..>3710)
                     /gene="carB"
                     /locus_tag="QGG16_06185"
     CDS             complement(1737..>3710)
                     /gene="carB"
                     /locus_tag="QGG16_06185"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HJP24896.1"
                     /translation="PWFLDQILAISEERLFLEGLALEGGGGSTRGLVPDLDRRDWRRA
                     KQLGFADTQLAHLWRCGVDEVRAAREVAGVFPTYKTVDTCGAEFAAETPYHYSAWEDE
                     DEVRPSDRPKVMILGSGPNRIGQGIEFDYCCVHASFALREAGFETIMVNCNPETVSTD
                     YDTSDRLYFEPLTEEDVANIVAAEQPVGIIVSLGGQTPLKLASTLPPELVAGTSPTSI
                     DLAEDREQWNALCDRLDVPQPPGGTAVDAVGARAIAAEVGYPVLVRPSYVLGGRAMEI
                     VYDDDQLDRAMAALSAFGSLGIEGGLSAERPVLVDRFLEDATEVDVDAVRDHTGEVVI
                     GAVMEHVEEAGVHSGDSACVIPPPHLSPQVVARIEGHTRDIAEALDVRGLLNVQFAVK
                     EGPDGADVYVIEANPRASRTVPFVAKATGVPLAKVASRVMLGATLTELREEGLLCERV
                     VGNHVAVKEAVLPFNRFPEADPVLGPEMRSTGEVMGIDLTAGLAFTKSQIAAGGALPD
                     GGTVFLSLADRDKVVGLEAARGFVELGLDLAATSGTAAHLRANGVPVSTVVAKLGEEG
                     TDAVELVRSGAVQLVVNSPRGRGPRSDGEHIRAAAGAQDIPLLTTGNAALAAARGLAD
                     WRTYPLAVRTLQEYHRGITLRPEVDGSKEANRS"
BASE COUNT          603 a         1319 c         1219 g          569 t
ORIGIN      
        1 cctgccatgt cccggacctt agtggcgtca gatgcccatg gccgactctc gatggccaga
       61 cgcccaggtt cgccgtctca ggtcccgcga ccagccaggt gggttaccag ttcgaccgcg
      121 gccgccacag ggtcaggtgc agcggttacc gctcggccga ctactaggag gtcggccccg
      181 gcggccatgg cgtctcgggg cgtcgccacc cgggcctggt cgtggacatc gccgccgggc
      241 atccgaatac cgggcacgac ccgaaccagc tgatcagccc acggatcggt gaccggcaga
      301 tcgggagcag cgcagacgat gcccgcgcaa ccggtcgacg ccgctagatc gcaacgctgc
      361 tcgagtacct ctcgaccggc cgtctgatcg ctggtcaaca cggttacacc caacacgcct
      421 ggggtctcag ctccgacccg ggacgcgccg tcggccatgg attccacggc cgaccgcagc
      481 atcgcctcgc cgccagcggt gtgcacggtg acccagcggg cccccgacga acccagcacc
      541 cgggctgcgc tgcccaccgt gttgggaatg tcgtggagct tcaggtcgca gaaaacctga
      601 aatccgtcct ccacaaagct cgccacggca tccggcccgg cggccgagaa gagttcgagg
      661 cccaccttga cggtgccgaa ccacggaacc agtgccgctg cggtccgacg agcggccact
      721 aggtcgtcga cgtcgagcac caggcagagc gactcacgga tgtacggcgg agccgaatcc
      781 ctgaaacggt tcgtcgtcga ttccacatca gccatgggct gctccgatca gttcatcgag
      841 acgagccacc ccttggcggt cgcaccatcg accgaggtca cgcagaatcc gggctggggc
      901 ccgtgggtca gcgaaggtcg ctgtccctac ctggaccgcc gaggcgccgg ccagcaggaa
      961 ctggacggcg tcgtcagccg acgccacccc acctacaccg atgatcgggg cattacccaa
     1021 cgcctctctg gtgtcgaaca ccgcacgcac ggccaccggt cggatagccg gccccgacag
     1081 tcccccccgt ccggcaccga ggagcgggcg ccgggtctcg gtgtcgatca ccatgcccag
     1141 caccgtgttg gccaccgtca ccgcctcggc acccgcggcc atcgccgcgg cggccacgtc
     1201 aggaagttcg ggggtgttgg ggctcaactt cgcccatcgg ggtcgaccgg ccgcgccggc
     1261 cgcatcgaca acctcggtgg tagccgacct cgagtgggcg aagagggcac gccgatcctc
     1321 gaggttggga cacgaggcgt tgacctccac ggccaccacc acgtctggag cgtcggccag
     1381 aagttcggcg gcacgggcga actcctcgac ggtccgcccc cagatgctgg ccacgactcg
     1441 ggcaccggtg gcggccaggc cagggaggtc gttttccagc caggactcga cacctggccc
     1501 ctgcagaccc acgctgttga ccatgcctga tggggtggcg tgcacccggg gcggtggatt
     1561 gccggcccat ggctcggcgt gcagcgactt cactaccacg gcacccaacg cggccgggtc
     1621 cagatggtcg gccagttcgt ggccatggcc ggcggttccc gatgctgtga gcaccggatt
     1681 gggaagcacg accgaaccga tgcgcgtcgt caggtcgacg gtagcggtcc ggcgactcac
     1741 gaccggttgg cttccttgga gccgtccacc tcgggacgca gggtgatgcc gcggtggtac
     1801 tcctggaggg tgcgaacagc cagcgggtag gtcctccagt cggccagtcc acgggccgcg
     1861 gccagcgcag cgtttccggt ggtcagaagc ggaatgtcct gagcccccgc cgcggcacgg
     1921 atgtgttcgc catcggagcg cgggcctcgc ccacgggggc tgttgaccac cagttgaacg
     1981 gcgccggatc gcaccagttc gacggcatcg gtgccctcct cgcccagctt ggccaccacc
     2041 gtcgaaaccg gcacgccgtt ggcccgtagg tgggcggcgg ttccactggt ggcagccagg
     2101 tcgagaccca gctcgacaaa cccgcgcgct gcctccaagc ccaccacttt gtcccggtcg
     2161 gccagcgaga ggaacaccgt gcctccgtcg ggaagtgctc ctccggcggc gatctgggac
     2221 ttggtgaagg ccagcccggc ggtcaggtca atgcccatta cctcaccggt ggagcgcatc
     2281 tccgggccca ggaccgggtc ggcctccggg aatcggttga acggcaggac tgcttccttg
     2341 acggccacgt ggttaccgac cacccgctcg cacagcaagc cctcttctcg tagttcggtc
     2401 agcgtggctc ccagcatcac ccggctggcc accttggcta gtggcacgcc ggtggctttg
     2461 gccacgaacg gcaccgttcg cgaggcccgt ggattggcct cgatgacgta gacgtccgcc
     2521 ccgtctgggc cctccttgac cgcaaactgc acgttgagca aaccccggac gtccagagcc
     2581 tcggcgatgt cgcgtgtgtg cccctcgatc cgggccacca cctgggggga aaggtgcggc
     2641 ggcggaatca cacacgcgct gtcaccgcta tggacgcctg cctcctcgac gtgttccatc
     2701 accgcgccga tcaccacctc gccggtgtgg tcacgcaccg cgtcgacgtc gacctcggtg
     2761 gcatcctcca agaaacggtc caccagaacc ggccgctcgg cggacaggcc gccctcgatg
     2821 cccaggcttc cgaaggcgct tagtgccgcc atggcacggt ccaactggtc gtcgtcgtag
     2881 acgatctcca ttgcccgacc gccaagaacg tacgaggggc gaacgaggac cgggtagccg
     2941 acctcggccg cgatggcgcg ggcaccaacg gcgtccaccg cggtgcctcc cggcggctga
     3001 ggtacgtcca ggcggtcgca cagggcgttc cactgttcgc gatcctctgc gaggtcgatg
     3061 gaggtcgggc tggttccggc cactagctcg ggcggcaggg tcgaagccag tttcaacggc
     3121 gtctggccgc cgagggacac gatgatcccc actggctgct cggccgccac gatgttggcg
     3181 acgtcctctt cggtcagcgg ctcgaagtag agccgatcac tggtgtcgta atcggtcgac
     3241 acggtctccg ggttgcagtt gaccatgatc gtctcgaacc cggcttcgcg tagggcgaag
     3301 ctggcgtgca cgcagcagta gtcgaactcg atgccctggc cgatgcggtt ggggccggac
     3361 cccaggatca tgaccttggg gcgatccgac ggtcggactt cgtcctcgtc ctcccacgcc
     3421 gagtagtggt agggcgtctc cgccgcgaac tcggccccac aggtgtcgac cgtcttgtag
     3481 gtcgggaaca ccccggcgac ctcacgggcg gctcgaacct cgtcgacccc gcaccgccag
     3541 aggtgggcca gttgggtgtc ggcgaaaccc aactgcttgg cccggcgcca gtcccgccgg
     3601 tccaggtcgg gcacgaggcc tctggttgag ccaccacccc cctcgagggc caatccctcg
     3661 agaaacagcc gctcctcgga gatggccagg atctggtcca ggaaccacgg
//
LOCUS       DASCMR010000262         4859 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001289257, whole genome shotgun sequence.
ACCESSION   DASCMR010000262 DASCMR010000000
VERSION     DASCMR010000262.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4859)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4859)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4859
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001289257"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            109..1647
                     /locus_tag="QGG16_06190"
     CDS             109..1647
                     /locus_tag="QGG16_06190"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012398.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HJP24897.1"
                     /translation="MSGLQTFTDYNRTVLIDGEFRRSDATAGRDVIDPATEAVLTELA
                     ETSVDEIDEAVAAGHAAQAAWWALSGLERAEAMHDIANDLAAMKHPLAEALTREMGKP
                     YKESADEVDWSVSAIRYYAEIGRNDMGRVMGNAVAGHLNYTLKLPLGVVVSIQPFNYP
                     MTLLAWEGAAALAAGNAVIAKPSEYTSITTLLFAEAFNKHLPPGLFQVVTGAGEAGRR
                     LVEHESTNMVAFTGSVPTGRAIAATCGQMMKPTLIETSGNDPFIVMPSAPIDVVARGA
                     AFAAYMNCGQICVSAERFFVHEDVHDEFVERLAAHARALRVGNGLDAVDMGPMVAEKE
                     RTRYEGVLARAQDQGATLTFGGGRPDGQDKGWFVEPTILTDCTPDMDIFGNESFGPAA
                     PICKVDSFDEALAAANDSMFGLGACLYTTNMKEAMRATEELDGGMVWINAPLLDNDAG
                     PFGGTKSSGLGRQLGNEGLETFRSTKLVWIDPDCEPQDFWWFPYADAEAFAGGAGDDG
                     EDAP"
     gene            1644..2768
                     /locus_tag="QGG16_06195"
     CDS             1644..2768
                     /locus_tag="QGG16_06195"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF013044.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HJP24898.1"
                     /translation="MTDTRLDPFEHGLTGDAANSNSLPARFYTDPAVVALEREEIFFR
                     SWIFVGHVSEVAEPGDYFTTSVFEQNIIVIRAEDGSIGAFYNVCRHRGHDLLCDSGHV
                     NRIVCPYHAWIFDLDGTLVKVRNSDNVSGFSAAEHGLSTVGVEVTAGLVFVNLDLDAA
                     PLAEQAAGLEAEIAAFVPEPEALVLAHTDSHIMKCNWKIPVENWSECYHCAIVHPPLA
                     AEFIDFTTFRIELNPLYQRQRMKLRDEKTQAAAANAHIDSDEQASWTVLPNLGIQIVH
                     GGYIMTSQWRPVDADHCEFVENWYLPNAEPTEHHRELFRFRAENTQPEDVAVCEGVQR
                     GLHSRGFGHGRLMVDAERTELSEHGSHHIQHWVATKLAGR"
     gene            2765..3970
                     /locus_tag="QGG16_06200"
     CDS             2765..3970
                     /locus_tag="QGG16_06200"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HJP24899.1"
                     /translation="MTAPHQAAGPLVGIRILDLTWMLSGPYCTMLLADMGADVIKVEN
                     PTGDPMRAVGPYMADDSERHFGGYFQSINRNKRSIVVDLKTDDGRAELLALASTSDAV
                     VENFRSGVLERLGVGYETLREVNPALVYASLRGFGDPRSGATELNDRPAMDYIAQAMS
                     GFMSVTGPPGEPTKAGPGIGDLFPGAITALGVVSAVLSAQRTGEGQYVDIAMYDAMVS
                     LCERIVYQYGYTGEDPIPAGNRHPLWSLYNTFEARDGFVCISAVFAHEWANLADVMGR
                     PELAVDQRFASDEARLVHDDEANEIVAAWIASRTRAEVLDAIGTRVPAAPVQTASDLF
                     SDAHLRQREMIVEVEHPGSARPAAIAGSPFRFAETPAGVRTRAPLLGEHGDEIRQELA
                     AAATDGAYG"
     gene            3963..>4859
                     /locus_tag="QGG16_06205"
     CDS             3963..>4859
                     /locus_tag="QGG16_06205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24900.1"
                     /translation="MAERHHPLRGAASIIGVGSTDYAALKVRSEAVPPLDLAAMAIDA
                     ALADADLARADIDALTTMGLPWDQLAVREGLRDLRVTVEYASGGRWVVPALQHAVQSV
                     AAGSADTVLLVLALSRLATYEDSAAPGTNTLFEAMHAMGGPAAHSALMARRYSHEFGD
                     CSAALRQVARSNRANAALNPAAVFRQPMTDADYDGARLIAEPLRLFDYCMVNDGAVAL
                     IVTNTPAGPAGRAVAIGGLAASADQGAHYSAADFYHRPSQAAAAEMFAMAGLAPSDID
                     LIQIYDNYTPSVLFALDGFGFTP"
BASE COUNT          863 a         1642 c         1548 g          806 t
ORIGIN      
        1 gatcgtcacc aaccgcgaac ctgccgcccc acgtagtgtt gccaaatgcc ctcagagacg
       61 atttgacacc gctagctccg cctcgacccg aacccaggaa gtgaacccat gagtggactg
      121 cagaccttca ccgactacaa ccggaccgtc ctcatcgacg gcgagttccg tcgtagcgac
      181 gccaccgcag gccgtgacgt catcgacccc gccaccgaag cggtgctgac cgaactggcc
      241 gagaccagcg tcgacgagat cgatgaagcg gtcgccgcgg gccacgccgc tcaggccgct
      301 tggtgggcgt tgagcgggct tgaacgtgcc gaggcgatgc acgacatcgc caacgacctc
      361 gccgccatga aacacccgct ggccgaagct ctcacccgcg agatgggcaa gccgtacaag
      421 gaatcggccg acgaggtcga ctggtcggtg tcggccatcc gctattacgc cgagattggc
      481 cgcaacgaca tgggacgggt catgggcaac gcggtcgccg gtcatctcaa ctacaccctc
      541 aagctgcccc tcggggtggt cgtctcgatc cagccgttca actacccgat gacgttgttg
      601 gcatgggagg gcgccgccgc gttggccgca ggaaacgcgg tcatcgccaa gccctcggag
      661 tacacgtcga tcaccacgtt gctgtttgcc gaagcgttca acaagcatct gccgcccggg
      721 ctctttcagg tcgtcacagg ggcgggagaa gcggggcggc gccttgtcga gcacgagagc
      781 acgaacatgg tggcattcac cggcagcgtg ccgaccggcc gggccatcgc ggccacgtgc
      841 gggcagatga tgaaaccgac cctcatcgag acgtctggta atgatccctt catcgtcatg
      901 ccgtcggccc cgatagacgt cgtggcccgc ggcgccgcct ttgcggccta catgaactgc
      961 ggccagatct gcgtgtcggc cgaacgcttc ttcgtccacg aggacgtgca cgacgagttc
     1021 gtcgaacggc tcgccgccca cgccagagcc ttgcgtgtcg gcaacggcct cgacgccgtc
     1081 gacatgggcc cgatggtggc cgaaaaggaa cgcacgcgct acgagggcgt gctagccaga
     1141 gcgcaggatc aaggcgcgac cctgaccttc ggtggcggaa ggccggacgg tcaggacaag
     1201 ggttggttcg tcgagccgac catcctgacg gactgcacgc cggacatgga catcttcggc
     1261 aacgagagct tcggccccgc cgcccccatc tgcaaggtcg acagcttcga tgaggcgctg
     1321 gctgccgcca acgattcgat gttcggcctc ggcgcctgtc tgtacacgac caacatgaaa
     1381 gaggcgatgc gcgccactga ggagctcgac ggcgggatgg tgtggatcaa cgcacctttg
     1441 ctcgacaacg acgccggccc cttcggtggc accaagtcca gcgggctcgg gcgtcagctc
     1501 ggcaatgaag gcctggagac cttccggtcg accaagttgg tgtggatcga ccccgactgc
     1561 gagccacagg acttctggtg gttcccgtac gccgatgctg aagccttcgc gggcggagcc
     1621 ggcgacgatg gcgaggacgc tccatgaccg atacgcgact cgatcctttc gagcacggcc
     1681 tcaccggcga cgcggccaac tcgaattcgc taccggcccg cttctacacc gatccggccg
     1741 tggtcgccct cgagcgcgaa gagatcttct ttcgcagttg gattttcgtg ggtcacgtct
     1801 cggaggtggc agaaccgggc gactacttca cgacatcggt gttcgagcag aacatcatcg
     1861 tcattcgagc cgaggacggg tcgatcggtg cgttctacaa cgtgtgtcgc catcgagggc
     1921 acgatctgct gtgcgactcg ggtcacgtca accggatcgt gtgtccgtat cacgcctgga
     1981 tattcgacct cgacggcact ttggtcaaag ttcgtaactc cgacaatgtg agtggttttt
     2041 cggctgccga gcacggcctc agcaccgtcg gagtggaggt gacggcggga ctggtgttcg
     2101 tcaacctcga cctcgacgcc gcaccccttg ccgagcaggc ggcagggctc gaagccgaga
     2161 tagcagcgtt cgtaccagag ccggaagcac tcgtgctcgc ccacaccgac agccacatca
     2221 tgaagtgcaa ctggaagatc ccggtggaga actggtcgga gtgctaccac tgcgcgatcg
     2281 tgcacccgcc gctggcggcc gagttcatcg acttcaccac gttccgtatc gaactcaacc
     2341 cgctctacca gcgccagcgc atgaagctgc gggatgagaa gacccaggcg gcggccgcca
     2401 acgcccacat cgacagcgac gaacaggcca gttggacggt gttgccaaac ctggggatcc
     2461 agatcgtgca cggtggctac atcatgactt cgcagtggcg acccgtggac gccgatcatt
     2521 gtgagttcgt cgagaactgg tacttgccaa acgccgagcc gactgagcat caccgagagc
     2581 tgttccggtt tcgggccgag aacacccaac ccgaagacgt ggcggtgtgc gaaggagtgc
     2641 agcgtggact gcacagccgc ggtttcggtc acgggcggct gatggtcgac gccgaacgca
     2701 ccgagctgag cgaacacgga tcgcaccaca tccagcattg ggtggcgacc aaactggccg
     2761 gtcgatgacg gcaccgcatc aggcggccgg gccgttggtc ggcatccgca tcctcgatct
     2821 gacctggatg ctgtccggac cgtattgcac gatgctgctg gccgacatgg gtgccgatgt
     2881 catcaaggtc gagaacccga ccggcgaccc catgcgagcg gtagggccct atatggccga
     2941 cgactccgag cgccacttcg gcggctactt ccaaagcatc aaccgcaaca agcgcagcat
     3001 cgtggtcgat ctcaagaccg atgatggccg cgccgagctg ttggcgctcg ccagcacctc
     3061 cgacgctgtg gtcgagaact tccgctcggg agtgctggag agactcgggg tcggctatga
     3121 gacgctgcgg gaggtcaatc cggccctggt gtacgcctcg cttcgagggt tcggcgatcc
     3181 ccgcagtggc gcgaccgagc tcaacgatcg cccggcgatg gactacatcg cgcaggccat
     3241 gagcgggttc atgagtgtca ccggcccgcc gggtgagccg accaaagccg gacccggaat
     3301 cggcgacctc ttcccgggtg cgatcaccgc gctcggcgtc gtcagcgccg tgctgtcggc
     3361 ccaacgcacc ggcgagggcc agtacgtcga catcgccatg tacgacgcca tggtctcgct
     3421 gtgtgaacgc atcgtctacc agtacggcta tacgggtgag gatccgatcc cggccggcaa
     3481 ccgccatccc ctgtggtcgc tgtacaacac gttcgaggcc cgggacggct tcgtgtgcat
     3541 ctccgctgtg ttcgctcacg aatgggccaa cctggccgac gtcatgggcc ggcccgagct
     3601 agccgtcgac caacgcttcg cctccgatga ggcccgtctc gtccacgacg acgaagccaa
     3661 cgagatcgtg gccgcctgga tcgcgtcgcg caccagggcc gaggtgctcg atgccatcgg
     3721 caccagggtt cccgccgccc cggtgcagac ggcgagcgac ctgttcagcg atgcccatct
     3781 gcgccagcgg gagatgatcg ttgaggtcga acatcccggc tcggcacgcc ccgccgccat
     3841 cgccggaagc cctttccggt tcgccgaaac tccggccggc gtccgtaccc gtgccccgtt
     3901 gctcggcgaa cacggcgacg agatccgcca ggagttggcg gcagccgcga cggacggggc
     3961 ctatggctga gcggcaccat ccactacggg gcgcagcatc gatcatcggc gtcggctcca
     4021 ccgactacgc cgccctcaag gtccgatccg aggcggtacc gccgctcgat ctggccgcca
     4081 tggccatcga tgccgccttg gccgatgccg acctggcccg cgccgacatc gacgcgctca
     4141 cgaccatggg gctgccctgg gatcagctcg ccgtgcgcga ggggctccgc gatctgcggg
     4201 tcaccgtcga gtacgcctcg ggtggccggt gggtcgtgcc cgccctgcag cacgcggtgc
     4261 agtctgtggc agctggctcc gccgacacgg ttctcctggt attggcgttg tcgcggctgg
     4321 ccacctacga ggattccgct gcgcctggca ccaatacgtt gttcgaggcc atgcacgcca
     4381 tggggggtcc ggccgcacac tcggcgctga tggctcgccg ttacagtcac gagttcggag
     4441 actgttccgc cgcccttcgt caggtggccc gttccaaccg ggccaacgcc gctctcaacc
     4501 cggcggccgt gttccgccag ccgatgaccg acgccgatta cgacggcgcc cggctcatcg
     4561 ccgaaccgtt gcggctgttc gactactgca tggtgaacga tggggcggtg gcgctcatcg
     4621 tcaccaacac tccggcgggt ccggccgggc gagcagtcgc cattggggga ctggccgcat
     4681 cagcggatca gggcgcccac tacagcgcgg ccgacttcta tcaccgcccg tcgcaggccg
     4741 ccgcagccga gatgttcgcc atggccggcc ttgccccgag cgacatcgac ctcatccaga
     4801 tctacgacaa ctacacccct tcggtgctgt tcgccctcga cggcttcggc ttcaccccg
//
LOCUS       DASCMR010000263         2947 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001307267, whole genome shotgun sequence.
ACCESSION   DASCMR010000263 DASCMR010000000
VERSION     DASCMR010000263.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2947)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2947)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2947
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001307267"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1050)
                     /locus_tag="QGG16_06210"
     CDS             complement(<1..1050)
                     /locus_tag="QGG16_06210"
                     /inference="COORDINATES: protein motif:HMM:NF013079.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M17 family peptidase N-terminal
                     domain-containing protein"
                     /protein_id="HJP24901.1"
                     /translation="MTVTFTPPQFSTARRAPARAEVVAHGITIERLADGDPLPSGLDR
                     ADLGRLGFEAKAGQVQVVPSDGRLVAAVGLGVTDELGTNGLRRAAAALGRAARTRRSL
                     ATDLASVVATTGELTEADGVAAVVEGLTLALYRFGYRSADDKGPVSDRLARVSLVGST
                     AAGVKTSIEQAEAVVGGVVLARDLVNEPGGSLTAPKFANRVRRMARDRGLTVKVLDEA
                     AIRRARLGGLLGVNRGSTHPPRFVELTYTPKGRPKGTLALVGKGLTFDAGGLSIKSGQ
                     GMMDMKMDMGGAAAVVGAMSALPTVAPRCRVRAYLPMTDNMLGGDATRPGDVLTIRNG
                     KTIEVLNTDAEGRLVL"
     gene            complement(1084..1674)
                     /locus_tag="QGG16_06215"
     CDS             complement(1084..1674)
                     /locus_tag="QGG16_06215"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: protein motif:HMM:TIGR00636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HJP24902.1"
                     /translation="MTETRVYTRQGDDGTTGLLYGGRVAKNSSAPMAYGDVDEAQAAI
                     GLARAASGPEMDAILVGLERDLWLVMAELACNPEKIAQLGESGSRPTPDMVTALEELI
                     DDVSDRFEPPTEFVAPGEDEVSARLDVARTVCRRAERSALSASVEGSSVVPYLNRLSD
                     LLWTLARWHEADSAAGGSLTVRSIEGRSIEGRSTPD"
     gene            complement(1727..2575)
                     /locus_tag="QGG16_06220"
     CDS             complement(1727..2575)
                     /locus_tag="QGG16_06220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24903.1"
                     /translation="MIDLDAASVLLQWATGGLFFLWVTGRRREVGIGYGWTMRITFGL
                     MAAGSVVVGLLLDPQPVREVAGAGVVLATTVAMVISVVRRHAGVSGQRGLEERRTARV
                     AEMTGIDRDARAFDDGPEFPPHLDLVAPLVGLVGLVAAGLAAGDPAALSVARMLVGAV
                     FLGAVSDAMLLGHWYLVQPGLARGPLIELVWWTGLAWPFELAVLLWPTGMVSVLNGTI
                     ADGYNGLLGWFWVASTVGTLALVVATRAALRERQYSAVMAATGLLYLAILTAFGMDLV
                     ARAALS"
     gene            complement(2598..>2947)
                     /locus_tag="QGG16_06225"
     CDS             complement(2598..>2947)
                     /locus_tag="QGG16_06225"
                     /inference="COORDINATES: protein motif:HMM:NF012766.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HJP24904.1"
                     /translation="YEVLHASHAAGVAAATVGTPCAEVDAAARKVIDDAGYGEFFVHR
                     TGHGIGVEAHEHPNMVAGNDLPLAPGHAFSVEPGIYVPGVWGARLEDIVVATEDGPDP
                     LNRIDHGLAVVDG"
BASE COUNT          488 a         1061 c          976 g          422 t
ORIGIN      
        1 cagcacgaga cggccctcgg cgtccgtgtt gagcacctcg atggttttgc cgtttcggat
       61 ggtcaggacg tcgcccggtc gggtggcatc cccacccagc atgttgtcgg tcatcgggag
      121 gtaggcccgg acccggcacc ggggggctac cgtcggcagg gccgacatgg cacccaccac
      181 cgcggctgca ccacccatgt ccatcttcat gtccatcatt ccttgaccgg acttgatgga
      241 cagcccgccg gcgtcgaagg tgagcccctt gccgaccagg gccagggtgc cctttggtcg
      301 gcccttgggg gtgtaggtga gctcgacgaa acggggcgga tgagtggagc cgcggttcac
      361 cccgagcagg cctccgaggc gtgcgcgacg aatggccgcc tcgtctaaca ccttgacggt
      421 cagcccccgg tcgcgggcca tgcgtcgcac ccgattggcg aacttcggcg ccgtcaggct
      481 gccacccggt tcgttgacca ggtcgcgggc cagcaccacg cctccgacaa ccgcttcggc
      541 ctgttctatc gacgtcttca cgcccgccgc agtgcttccc acgagtgaca cccgggcgag
      601 tcggtccgat accggtccct tgtcgtcggc cgatcggtag ccgaaccggt aaagggccaa
      661 ggtcagaccc tcgaccaccg cggcaacgcc gtcagcctcg gtcagctcgc cagtggtggc
      721 caccaccgac gccaggtcgg tggccagtga tcgacgagtc cgtgcggcac gacccagcgc
      781 ggcagctgcc cgtcggagcc cgttcgtgcc cagttcgtcg gtgacgccga ggcccacggc
      841 agctactagg cggccgtcgg acggcacgac ctggacctgc ccggccttgg cctcgaaacc
      901 gagacgaccc aggtccgctc gatcgaggcc ggacggtagc gggtctccat cggccagccg
      961 ttcgatggtt attccgtggg ccaccacctc ggcccgagcg ggagcgcgac gggccgtaga
     1021 gaactggggg ggcgtgaacg tgacggtcat ggtcttcctc ggggaatcgg atcgggacga
     1081 gtatcagtcg ggcgtggagc gaccctcaat cgaacggcct tcaatggagc ggacagtgag
     1141 cgaaccgccc gccgcgctgt cggcctcgtg ccaccgggcc agagtccaca ggaggtcgga
     1201 gaggcggttg aggtacggca ctaccgacga cccctcgacg ctggccgaca gggccgagcg
     1261 ttcggcacgg cggcacaccg tgcgggccac gtcgagtcgg gccgacacct cgtcctcgcc
     1321 gggcgccacg aactcggtcg gcggttcgaa ccgatccgac acgtcgtcaa tgagttcttc
     1381 caacgctgtg accatgtccg gagtgggtcg cgatcccgac tcgcccagtt gggcgatctt
     1441 ctcgggattg caggccagtt cggccatgac cagccagagg tcccgctcca ggccgacgag
     1501 gatggcgtcc atctcggggc cggaggccgc ccgggccagc ccgatggccg cctgggcctc
     1561 gtctacgtcg ccgtaggcca tgggagccga agagttcttg gccacccgcc cgccgtacaa
     1621 caggcctgtc gtgccgtcgt cgccttgccg ggtgtacacg cgtgtttcgg tcatcaggtc
     1681 gcgaatccta ccggtcgtgt cgtttcccca gaagaaatgc ggcacctcag gagagggcag
     1741 cccgtgccac caggtccatg ccaaaggcgg tgaggatggc caggtacaac agcccggtgg
     1801 ccgccatgac cgccgagtac tggcgctccc gcagggcagc ccgggtggcc accacgaggg
     1861 ccaacgttcc caccgtcgac gccacccaga accatcccag gaggccgttg tatccgtcgg
     1921 cgatggtccc gttcaacacc gaaaccatgc cggtcggcca cagcaggacg gccagctcga
     1981 agggccatgc cagacccgtc caccagacca gttcgatcaa cggcccgcgg gccaggccgg
     2041 gctgcaccag gtaccagtgg ccgaggagca tggcgtcgct caccgcgccg aggaacacgg
     2101 cccccaccag catccgggcc accgacaggg cggccggatc accagcagcc aggccggccg
     2161 ccaccaggcc gaccaacccg accaacggcg ccacaagatc gaggtgcggt ggaaactcgg
     2221 ggccgtcgtc gaacgctcgg gcatcccggt cgatcccggt catctcggcc acccgggctg
     2281 tccggcgctc ctcgaggcca cgctggccgg acacgccggc atgtcgacgc accaccgaga
     2341 tgaccatggc caccgtggtg gccagtacca ccccggcgcc cgccacctcc cgcaccggct
     2401 gcggatcgag cagtagcccc acaaccaccg atccggcggc catcaacccg aaggtgatgc
     2461 gcatcgtcca gccgtagccg atgcccacct cgcggcgtcg cccggtcacc caaaggaaga
     2521 acagtccgcc ggtggcccac tgcagcagca cgctggccgc gtcgaggtcg atcaccggac
     2581 agccgtgctg gtgaccgtca accgtcgacc acggccagcc cgtggtcgat ccggttgagc
     2641 ggatccgggc cgtcttcggt ggccacgacg atgtcctcaa ggcgagcgcc ccacacaccg
     2701 ggcacgtaga tccccggctc gaccgagaag gcgtggccgg gagccagggg caggtcgttg
     2761 cccgccacca tgttgggatg ctcgtgggcc tcgaccccga tgccgtggcc ggtgcggtgc
     2821 acgaagaact cgccgtaccc ggcgtcgtca atgaccttcc gggccgcagc atcgacttcg
     2881 gcgcacggcg tgcccaccgt ggctgcggct acgcccgctg catgggaggc gtgcagcacc
     2941 tcgtaca
//
LOCUS       DASCMR010000264         5671 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001308993, whole genome shotgun sequence.
ACCESSION   DASCMR010000264 DASCMR010000000
VERSION     DASCMR010000264.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5671)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5671)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5671
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001308993"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..349)
                     /locus_tag="QGG16_06230"
     CDS             complement(<1..349)
                     /locus_tag="QGG16_06230"
                     /inference="COORDINATES: protein motif:HMM:NF012544.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HJP24905.1"
                     /translation="MGKSERKGDHGRLTRSLGLRHVFALSTGAMLSSGLFLLPGLAAA
                     KAGPSAVLAYLLAGCLAVPAMLSVSELATALPKAGGAYYFLERALGPAVGTVAGFGTW
                     LSLVLKDAFAMVGM"
     gene            complement(359..1369)
                     /locus_tag="QGG16_06235"
     CDS             complement(359..1369)
                     /locus_tag="QGG16_06235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJP24906.1"
                     /translation="MTTLDDLTAVGLTRHDVDAHGTRIHVAEMGGDSGVGPLVLFVHG
                     FPESWYSWRHKLPAVAAAGFRAAAIDVRGYGSSEAPDAIDDYRLVDLVGDCVGVVEAL
                     GATEAVIVGHDWGSPIASTAALLRPDVFRAVALLSVAYTPPNEFRPTDIFRMMGGDDM
                     FYIEYFQEPGVAEAEIGTDPAHWLEGMIFSASGDAPPPMPGAPAGFAVAPGGRLDDRF
                     HYPDGPLAWQDADDIAFYVGEFARAGFSGGLNRYRCVDHDWVDLRAWREASIRQPSLY
                     IGGEKDGPTIWGAGSIARYGETLPGLHDSVILPGVGHWMQQEDAVGTNAALLDFLASL
                     TI"
     gene            complement(1366..1803)
                     /locus_tag="QGG16_06240"
     CDS             complement(1366..1803)
                     /locus_tag="QGG16_06240"
                     /inference="COORDINATES: protein motif:HMM:NF013970.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HJP24907.1"
                     /translation="MAARTFVDASILTRLFDDDEPERQAAARASIGATDGPALVVSGP
                     VLAEFLEVVTTQMARPLSAMVARRALAELAELTVVPADASLVLAAADAADEVGLNIRD
                     ALAVEAAVVGGCDRMVTEAMAHGSLVRGVRVEDPAETNGKPQT"
     gene            complement(1803..2039)
                     /locus_tag="QGG16_06245"
     CDS             complement(1803..2039)
                     /locus_tag="QGG16_06245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24908.1"
                     /translation="MANLTLAVDDDLLHRARVRAAEEGTSVNAVVRELLTAYSAADRV
                     DAARRRLVALSVSSAAGSGGRPITGASPDPGWNT"
     gene            complement(2111..3247)
                     /locus_tag="QGG16_06250"
     CDS             complement(2111..3247)
                     /locus_tag="QGG16_06250"
                     /inference="COORDINATES: protein motif:HMM:NF014698.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HJP24909.1"
                     /translation="MSLLGASVGPAGDVVTVEMAAGPVRFHALWLRDNARDEASRHGD
                     NDQRLFDVTELADEVSAMSAEVVDGRLVVAFGPDGVTSVYDEVWLEANRYDGSVTTSS
                     GRPVSWGAADLSVQRLPWTDRQDLEAWQAITRALVRDGLAIVDGLAVGNDAEGPGATG
                     TGADIVDVANLWGPVRETNYGEIFHVRAEANPTNLAFTPRALNVHTDNPYRRPVPGYQ
                     LLHCLVASDVGGVTVLVDGFRAAELLRDEEPGAFELLSTRSVPFRWSGDGFDLRNRGP
                     LIEVEEGGPEAGAVRAVRYNNRSAAPFDQPFDEMTAFYEAFRTFAQMLHREDLEYRFT
                     LAPGECLVFDNERVLHGRHGEADPERYLQGCYLDRDWIHGRQLT"
     gene            complement(3244..3786)
                     /locus_tag="QGG16_06255"
     CDS             complement(3244..3786)
                     /locus_tag="QGG16_06255"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24910.1"
                     /translation="MPDQVRALFAARGHETYSERVTMAEHARQAAALAHVAGADDALV
                     LAALLHDVGHFLDEPDSAFGVTDHGTTGGAWVAVRFADGVSEPVRLHVAAKRYRCFVD
                     PGYEAELSPASVGTLRLQGGPMSAVEAAAFESEPFAAAALAVRGWDDGGKIDGNRVDG
                     LEIPPIEHWEYLLGAPELRR"
     gene            3889..5211
                     /locus_tag="QGG16_06260"
     CDS             3889..5211
                     /locus_tag="QGG16_06260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP24911.1"
                     /translation="MAIGPGLHIEDPSDPSLDLRMSDGARPLYEQVKAFIAEEIEPVT
                     LKFHRLGTERTEHWGHHPGQIEILEALKVKAREAGLWNFFLPDAETGEGLSNLDYAYI
                     ASELGKNPLASQSMNCSAPDTGNMEVIERVGTPEQKKQWLEPLLNGEIRSAYAMTEPD
                     LASSDAKNIACQAVLDGDEWVINGTKYYISGAGDPRCKVMITMVQTSPDGPPHRRQSQ
                     ILVPIDTPGVTIDHPMQVFGDDDAPHGHMHITFKDARVPAANLLLGEGRGFEISQLRL
                     GPGRIHHCMRSIGAAERAIELMCRRGLHREAFGKTISHLGKNMEVIARARIEIEAMRL
                     MVLRAAKAMDTMGNAEARVWISAVKAMVPEKVCQIIDAAIQIHGATGVSQWTPLAAMY
                     TQQRTLRLADGPDEVHHFVVARFELNRYQDGPGDIPMTSHTGPVFAGP"
     gene            5265..>5671
                     /locus_tag="QGG16_06265"
     CDS             5265..>5671
                     /locus_tag="QGG16_06265"
                     /inference="COORDINATES: protein motif:HMM:NF012955.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HJP24912.1"
                     /translation="MTDDPRAHKPAAAQTRTDLEAFAASLPPDDGTDAADVARGFIAT
                     RTDPVIDKIEPNPWLPISWDLSKSDFVHGPCPDTVNPSLWRQAGFNAQHGLYEVIDGF
                     YQVRGFDTSTVTFIRGHEGWVVIDPLTTTETARA"
BASE COUNT         1041 a         2054 c         1719 g          857 t
ORIGIN      
        1 tcatcccgac catggcgaag gcgtccttga ggacgagcga cagccaggtc ccgaaaccgg
       61 ccaccgtccc caccgcgggg ccgagcgccc gctccaggaa gtagtaggca cccccggcct
      121 taggtagtgc ggtggccagc tcggacacgc tgagcatggc cggcacggcc agacacccgg
      181 ccaacaggta ggccagcacg gccgacggtc cggccttggc agcagccaac ccgggcagaa
      241 ggaacagacc cgacgagagc atggccccgg tggacagagc gaaaacatgg cggaggccca
      301 gcgagcgcgt cagccggccg tggtcgccct tacgctcgga cttccccatg aatggaccct
      361 agatggtgag cgaagccagg aagtccagca gcgccgcgtt ggtgcccacc gcatcctcct
      421 gctgcatcca gtgacctacc ccgggcagga tcaccgagtc atgcaggccg ggcagggtct
      481 cgccgtagcg ggcgatgctc ccggctcccc agatcgtggg gccgtccttt tccccgccga
      541 tgtagaggga gggctgccgg atcgaagctt cacgccatgc ccgcaggtcg acccagtcgt
      601 ggtccacgca gcgatacctg ttgaggccgc cggagaaccc ggcacgggcg aactcgccaa
      661 catagaaggc gatgtcgtcg gcgtcctgcc atgccaacgg gccatccgga tagtggaacc
      721 ggtcgtccag ccggcccccc ggggctacgg caaacccagc cggtgctccc ggcatcgggg
      781 gcggcgcgtc gcccgaggcg ctgaagatca tcccctccaa ccagtgggcc gggtcggttc
      841 cgatctcggc ttcggctacc ccgggttcct ggaagtactc gatgtagaac atgtcgtcac
      901 cacccatcat ccggaagatg tcggtgggcc tgaactcgtt gggcggggtg taggccacgc
      961 tcaggagtgc caccgcccga aagacgtcgg gtcggaggag cgctgccgtg ctggcaatgg
     1021 gcgatcccca gtcgtggcca acgatcaccg cctcggtcgc cccgagggcc tctaccaccc
     1081 cgacgcaatc accgacgagg tcgaccagcc ggtagtcgtc gatcgcgtcg ggcgcttcgg
     1141 acgagccgta gccccgcacg tcaatggctg ccgcccggaa gcctgcggca gcgaccgccg
     1201 gtagcttgtg ccgccacgag taccacgatt cggggaagcc gtgaacgaac aagaccaacg
     1261 ggccgacccc cgaatcacct cccatctcgg ccacgtggat acgcgtgccg tgggcgtcca
     1321 cgtcgtggcg ggtcagccct accgcggtca gatcatccag tgtcgtcatg tttgtggttt
     1381 cccgttcgtc tccgctggat cctcaacccg gaccccacgc acgaggctgc catgggccat
     1441 tgcctcggtg accatccggt cgcacccgcc aaccaccgcg gcctccacgg ccagggcatc
     1501 acggatgttc aggcctacct cgtcggccgc gtcggcagca gccagcacaa gcgaggcatc
     1561 ggcgggtacc acggtgagtt cagccaactc cgctagggca cgccgggcca ccatggccga
     1621 gagggggcgt gccatctggg tggtgacgac ttccagaaac tcggccaata ccggacccga
     1681 tacgaccaac gcggggccgt cggtagcccc gatcgacgcc cgggctgcgg cctgacgttc
     1741 tggctcgtca tcgtcgaaca gcctggtcag gatcgaggcg tccacgaagg tccgagccgc
     1801 catcaggtat tccagcccgg atcggggctc gctccggtga tgggtcgacc gccagaacca
     1861 gccgccgagg agaccgacag ggccacgagc cggcggcgtg ccgcatccac ccggtcggca
     1921 gccgagtagg cggtcagaag ttcgcgaacc acggcattga ccgaggtgcc ttcctcggcg
     1981 gcccggaccc gggcccggtg taacaagtca tcgtcaacgg ccagggtcag gtttgccacg
     2041 ggtcgacttc ctttctcgaa tccctagaat cctgtgtttc acatatctcg tgtagcacag
     2101 gattctagat tcaagtcagt tgtcgaccgt ggatccagtc cctatcgagg tagcagccct
     2161 gtagatatcg ctcaggatcg gcctcaccat gccggccgtg aagtacccgt tcgttgtcga
     2221 acaccaggca ctctccgggc gccagagtga accggtactc cagatcctca cgatgcagca
     2281 tctgggcaaa ggtccggaat gcctcgtaga aggctgtcat ctcgtcgaac ggctggtcga
     2341 acggtgcggc tgaccggttg ttgtatcgga cagcccggac ggcccctgcc tcgggcccac
     2401 cctcctccac ctcgatcaac gggccccgat ttcgtagatc gaaaccgtct cccgaccagc
     2461 ggaacggcac gctgcgggtt gataacagtt caaaggcccc cggctcctca tctcgtaaca
     2521 actcggcagc ccggaagccg tcgaccagta ccgtcacccc acccacgtcg ctggcgacta
     2581 ggcagtgcag caactggtac ccgggaaccg gccggcgata cgggttgtcg gtgtgcacgt
     2641 tgagtgcccg cggcgtgaag gccagattgg tcgggttggc ctcggcccgt acgtgaaaga
     2701 tctcgccgta gttggtctcg cggaccgggc cccacaggtt cgccacgtcg acgatgtccg
     2761 cccccgtgcc agtggcgccc ggcccctcag catcgttccc cacggccaag ccatccacga
     2821 tggccaggcc gtcgcgcacg agtgccctgg tgatggcctg ccacgcctcg agatcctgcc
     2881 gatcggtcca tggcagccgc tggaccgaca ggtcggcagc cccccaggag accggtcgcc
     2941 cagatgatgt ggtcacggaa ccgtcgtagc gattggcttc cagccatacc tcgtcataga
     3001 cgctggtcac gccatcaggg ccgaacgcca ccaccagacg accgtcgacc acctcagccg
     3061 acattgcgga gacttcgtct gccaactcgg tgacgtcgaa gaggcgctgg tcgttgtccc
     3121 cgtgacgcga cgcctcgtcc cgggcgttgt ccctaagcca cagggcgtgg aaccgcaccg
     3181 gaccggcggc catctcgacg gtgaccacgt cgccggccgg gccgaccgag gcaccgagga
     3241 ggctcatcgc cgcagctccg gcgcaccgag caggtactcc cagtgctcaa tcggcgggat
     3301 ctccaacccg tccacccggt tcccgtcgat cttgccaccg tcgtcccagc ctcgaacggc
     3361 gagtgcggcg gcggcgaacg gctcggattc aaatgccgcc gcctcgacgg ccgacatagg
     3421 cccaccctgc agtcgaaggg tccccaccga ggccgggctc aactcggcct catagcccgg
     3481 gtccacgaag caccggtacc gcttggctgc cacgtgcagg cgtaccggct cgctcacacc
     3541 gtccgcgaag cgcacggcca cccaggcccc gccggtcgtc ccgtggtcgg tcaccccgaa
     3601 tgccgagtcc ggttcgtcca ggaagtgccc cacgtcgtgc agtagagcag ccaacaccag
     3661 ggcgtcatcg gcgccggcga catgagccaa cgccgcagcc tgacgggcat gttcggccat
     3721 cgtcaccctc tcgctgtagg tctcatggcc ccgggcggca aacagcgccc gcacctgatc
     3781 aggcaccgga tccttcatgt cgcgcatcat gcccgctggg gaccccggcg accagcggga
     3841 ataggttcga cccgttcgtc caacccacac accccccgga gaaacaccat ggcaatcggc
     3901 cccggcctcc acatcgaaga tcccagcgat ccgtccctcg acctgcgcat gtccgacggc
     3961 gcccgcccgc tctacgagca ggtgaaggcc ttcatcgccg aggagatcga accagtcacg
     4021 ctgaagttcc accgtctggg caccgaacgc accgagcact ggggtcacca tcccggtcag
     4081 atcgagattc tcgaagccct caaggtcaag gcacgcgagg ccggcctgtg gaacttcttc
     4141 ctccccgacg ccgaaaccgg agagggcctg tccaacttgg actacgccta catcgcctcc
     4201 gaattgggta agaacccgct ggcctcccag agcatgaact gctcggcccc cgacaccgga
     4261 aacatggagg tcatcgaacg ggtcggcacc cccgaacaga agaagcagtg gctcgagccg
     4321 ctactcaacg gcgagattcg ctcggcgtac gccatgaccg aacccgatct ggcctcctca
     4381 gacgccaaga acattgcctg ccaggccgta ctagacggcg acgagtgggt cattaacggc
     4441 accaagtact acatctctgg cgccggcgac ccccgctgca aggtgatgat caccatggtc
     4501 cagaccagcc ccgacggacc cccgcaccgc cgccagtcgc agatcctggt ccccatcgac
     4561 acccccgggg tcaccatcga ccaccccatg caggtgttcg gtgatgacga cgccccccac
     4621 ggtcacatgc acataacgtt caaggacgcc cgggtgccgg ccgccaacct cctgctcggc
     4681 gagggacggg gcttcgagat ctcccagcta cgcctcgggc ccggtcgcat ccaccactgc
     4741 atgcgatcca tcggtgctgc cgagcgggcc atcgagttga tgtgtcgacg ggggctccac
     4801 cgcgaggcct tcggcaagac catctctcac ctgggcaaga atatggaggt catcgcccgg
     4861 gcccgcatcg agatcgaggc catgcgactc atggtgcttc gcgccgccaa ggccatggac
     4921 accatgggca acgccgaagc ccgggtctgg atcagcgccg tgaaggccat ggtgcccgag
     4981 aaggtctgcc aaatcatcga cgccgccata cagattcacg gcgccaccgg tgtctcccag
     5041 tggacgccgc tggccgccat gtacacccaa cagcgcacgc ttcgcctagc tgacggcccc
     5101 gacgaggtac accacttcgt ggtggcccgc ttcgaactga accgctacca ggacggcccc
     5161 ggcgacatcc ctatgacctc gcacaccggc ccggtgttcg ccggaccctg atcctctagc
     5221 ccgccaccga cctgctccgc ccagccacag gaatagagac cccgatgacc gacgacccgc
     5281 gcgcccataa gccggccgcc gcccagaccc gtaccgacct cgaggccttc gccgcctcgc
     5341 tgccacccga cgacggcacc gacgccgcgg acgtggctcg gggcttcatc gccacccgga
     5401 ccgatccggt catcgacaag atcgaaccca acccgtggct gcccatcagc tgggatctct
     5461 cgaagtcgga cttcgtccac ggaccctgcc ccgacaccgt caacccttcg ttgtggcgtc
     5521 aggccggatt caacgcccag cacggcctct acgaggtgat cgacggcttc taccaagtgc
     5581 gcgggttcga cacctcgact gtgaccttta tccggggtca cgaagggtgg gtggtaatcg
     5641 atcctctcac gaccacggag acggcccggg c
//
LOCUS       DASCMR010000265         5329 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001310425, whole genome shotgun sequence.
ACCESSION   DASCMR010000265 DASCMR010000000
VERSION     DASCMR010000265.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5329)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5329)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5329
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001310425"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            131..1228
                     /locus_tag="QGG16_06270"
     CDS             131..1228
                     /locus_tag="QGG16_06270"
                     /inference="COORDINATES: protein motif:HMM:TIGR01187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJP24913.1"
                     /translation="MNGTTNGQGPVVELAGVVKRFGDRSGTEVTAVDHIDLTITDGEF
                     FSLLGPSGCGKTTTLRMVAGLELPTAGSIRIHGEEMGLRPPNKRPVNTVFQSYALFPH
                     MTVAANVGFGLEMRKVPASERKDLIDWAIDLVEMGSMAHRKPTQLSGGQQQRVALARA
                     LVNRPEVLLLDEPLGALDLKLRQQMQLELKNLQREVGITFVYVTHDQEEAVTMSDRIG
                     VMHEGRLLQVDTPEAIYERPTTRFVADFIGQTNFLEATVASGEEVVLSNGDRLRLSSD
                     QPAGSSVAVTVRPERLTVHRRGEAPTDRHCVEGRVETVTYLGNAVVYGIGVDWMHLEV
                     RCPATLAGDRRDVGDDVTVSFEPDHAAVVTG"
     gene            1228..2148
                     /locus_tag="QGG16_06275"
     CDS             1228..2148
                     /locus_tag="QGG16_06275"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP24914.1"
                     /translation="MPVEAPPGDAPELEDTTEVATPGLEYQAERAKARQGFLLGLPTI
                     VYLLIFFVAPLGFVVAYSFATRTSTGRTELRDFNLNAYARLGDDIIMTVAWRSLWMAV
                     LATLICLVLAYPLAYFISTRSPAVRNMLLVAVMIPFWSNFLIRTYAWRVLLDSDGLVT
                     QGLELLGLGDGRILFTSNAVILGLVYGYLPFMVLPLYAAIERVDWSLVEGARDLYASG
                     WAAFRRVVWPLSRPGVIAGSMLVFVPSFGAYVTPAILGGNKEGLLGSYIVLQFLSARN
                     GPVGSAVSVVVLGVMLVSTLIYFRAGGKNL"
     gene            2145..3002
                     /locus_tag="QGG16_06280"
     CDS             2145..3002
                     /locus_tag="QGG16_06280"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP24915.1"
                     /translation="MSKGVAKSTAEPQGASRWLLRGHSAAVFAFFYAPIVVLCVFSFN
                     DSNAVGNWNGFTLDWYSDLFANDNIQSSIWVSVKVCVVSTLISVVLGTAGALALERFR
                     WWGQKAFDAVLYLPIIIPDVTMAVMMLVFFSETASWFDWIPGVNLQNGLEKLVFSHVA
                     FNISFVSVVVRARLANLDASMEEAAADLYANRWQAFRRVTLPQIMPGVIGGALLAVTI
                     SLDDVVVSSFVSAVGGTPLSVYVFGMLRKGVTPLVNSVSVVMLAASMAFVMASLVISR
                     ATGSEREER"
     gene            3008..4111
                     /locus_tag="QGG16_06285"
     CDS             3008..4111
                     /locus_tag="QGG16_06285"
                     /inference="COORDINATES: protein motif:HMM:NF024808.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0019808 - polyamine binding [Evidence
                     IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015846 - polyamine transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein"
                     /protein_id="HJP24916.1"
                     /translation="MRKWIRIVALLGILSVVAASCGSDSEEAAGDFKQCDAGETDGDL
                     AFFNWSEYMDPDLIAAFQDEFGVSVTEDFYPSNEEMFAKISPGGTGYDVIVPSDYMIS
                     ILRSEALIQPIQKDAVPNHVNIADKFADPPFDPGNTYTQPYQWGTTGVGVDLGVTGHD
                     IPLTWGLLFDADLAEQYGLSGKISLLDDPRETMGAALKYLGYSLNSTSADELAEAEAV
                     IADAVSRVAAFDSDQYSELVVAGETIAGHGYSGNFLWDFEEGESEYTYFVPDEGGTVW
                     VDGMAVLVDAPHPCTAFAFINFLLDAHNGAQLTNFNWYASPNGAAEEFIDQEVLDNQI
                     IYPSAATMERLEFIEDTGEFEIEYTDALTRARG"
     gene            4243..>5329
                     /locus_tag="QGG16_06290"
     CDS             4243..>5329
                     /locus_tag="QGG16_06290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HJP24917.1"
                     /translation="MSEHQRLAELAERHLWGHFSVLKNDIDGTRVIERGQGCHVWDAE
                     GNRYLDGLAGLFVSQLGHGRPELARAAGDQAATLGYFPIWTYGHPTAIELSAILAGLA
                     PGDLNRVFFTTGGSEAVESAWKLARQYFKLKGKPDKVKVVSRNLAYHGTTMGALSITG
                     LDSIKTVFEPLVPGAIKVPETNHYRCPTCQDDPHCSLHAADAIEEAIIREGPDTVAAL
                     FVEPVQNAGGCFVPPPGYFDRVREICNRHDVLLVSDEVICAYGRIGHMFGCERFGYIP
                     DVITSAEGLTSGYAPLGAMIVSDRVAEPFVGTGDSFLHGITFAGHPVSCAVALANLQI
                     FQDEGIIGHVQTNESAFRAALDDLADLP"
BASE COUNT          875 a         1725 c         1742 g          987 t
ORIGIN      
        1 tcgacgacgg attcagtagt gtgccgcacg gcatggagag tagtccctct gtgcccgagg
       61 gcgagtggcc cggccggtac tccagaaggg ttccggcggg ttcagacgag ggacggggag
      121 gaccgaatcg atgaacggaa ccacgaacgg gcagggtccg gtggtcgagt tggccggggt
      181 ggtcaagcgc ttcggcgatc gctcgggcac cgaggtgact gcggtggacc acattgacct
      241 caccatcaca gatggcgagt tcttctccct gctcggcccg tcaggctgtg gcaagaccac
      301 cactctgcgc atggtggccg gcctcgaact gccgaccgcc gggtccatcc gtatccacgg
      361 tgaggagatg ggcctccgtc cgccaaacaa gcgacccgtc aacaccgtct tccagagcta
      421 cgcgctgttc ccccacatga cggtggccgc caacgtcggc ttcggcctcg agatgcgcaa
      481 ggtccccgct tccgagcgca aggacctcat cgactgggcc atcgacctgg tcgagatggg
      541 ttccatggcc caccgcaagc ccacccagtt gtcgggtggc cagcagcagc gggtggcttt
      601 ggcccgggcg ttggtgaacc ggcccgaggt gctcctgttg gatgagccgc tgggggctct
      661 cgacctgaag ctccgccagc agatgcaact cgaactcaag aacctccaac gcgaggtcgg
      721 catcaccttc gtttacgtca cccacgacca agaggaggcg gtcaccatga gtgaccgcat
      781 cggcgtcatg catgagggtc gcctcctaca ggtcgacacg cccgaggcca tctacgagcg
      841 gcccaccacc cggttcgtgg ccgacttcat cggacagacc aacttcctcg aggccacggt
      901 ggccagcggc gaggaggttg tgctgtcgaa cggcgaccgc ctccgcctgt cgtcggacca
      961 gccggccggg tcgtcagtgg ccgtcaccgt ccgacccgag cgactcaccg tgcaccgccg
     1021 gggcgaggcg cccacggatc gtcattgcgt cgagggccgg gtggagaccg tcacctacct
     1081 gggcaacgcc gtggtctacg gcatcggcgt ggactggatg cacctcgagg tccgttgtcc
     1141 agccaccctg gccggcgacc gtcgggacgt gggcgacgac gtcacggtgt ccttcgagcc
     1201 cgaccacgcc gcggtggtga ccggctgatg cccgtcgagg cacctccggg cgacgccccg
     1261 gaactggagg acaccaccga ggtggccaca ccgggtctgg agtaccaggc cgaacgtgcc
     1321 aaggcgcgtc agggcttcct gctggggctg cccaccatcg tctatttgct gatcttcttc
     1381 gttgccccgc tgggattcgt ggtggcctac tccttcgcca cccgcaccag caccggccgg
     1441 accgagttac gcgacttcaa cctgaacgcc tacgcccgcc tcggcgacga catcatcatg
     1501 acggttgcct ggcggtcgct gtggatggcc gtgctggcca cgctgatctg cctggtgctg
     1561 gcttacccgc tggcctactt catttcgacc cgcagtccgg ctgtacgcaa catgctcctg
     1621 gtcgcggtga tgatcccgtt ctggtcaaac ttcctgatcc ggacttacgc ctggcgggta
     1681 ctgcttgaca gcgacgggct cgtgacccag ggcctggagt tgctcggtct aggggatgga
     1741 cgcatcctgt tcacctccaa tgctgtgatc ctgggcctcg tctacggcta cctgccgttc
     1801 atggtgctgc ctctgtacgc ggccatcgag cgcgtcgact ggagcctcgt ggaaggtgcc
     1861 cgtgacctct acgccagtgg ctgggcggcc tttcgccggg tggtgtggcc gctgtcgcgc
     1921 cctggcgtca ttgctggttc gatgctggtc ttcgtgccca gcttcggggc ctacgtcacc
     1981 ccggccatcc tgggcggcaa caaggagggc ctgctgggca gttacatcgt gctgcagttc
     2041 ctttcggccc ggaacgggcc ggtgggttcg gcagtgtcgg tggtggtcct cggcgtgatg
     2101 ctcgtcagca cactcatcta cttccgggcc ggggggaaga acctgtgagc aagggcgtcg
     2161 ccaagtcgac cgctgaaccc cagggggcta gtcgctggct gcttcgcggc cactcggcgg
     2221 ccgtgttcgc cttcttctac gccccgatcg tcgtgctctg cgtcttctcg ttcaacgaca
     2281 gcaacgcggt gggaaactgg aacggcttca cgctggactg gtactcagac ctgttcgcca
     2341 acgacaacat ccagtcctcg atttgggtgt cggtcaaggt gtgcgtggtg tcgacgctga
     2401 tctcggtagt gctgggcact gctggagcgt tggccctcga acggttccgg tggtggggcc
     2461 agaaggcctt cgacgctgtc ctctacctgc cgatcatcat ccccgacgtc accatggccg
     2521 tgatgatgct ggtcttcttc agcgagacgg cgtcatggtt cgactggatt cccggcgtca
     2581 acctccagaa cggcctcgag aagctggtgt tcagccacgt ggcgttcaac atctcgttcg
     2641 tgtcggtggt ggtaagggcc cgtctggcca acctggacgc ctccatggag gaggcggccg
     2701 ccgaccttta cgccaaccgc tggcaggcct ttcgccgggt caccctgccc caaatcatgc
     2761 cgggcgtgat cggtggggcc ctgctggcgg tgaccatctc gctggacgac gtggtggtgt
     2821 ccagcttcgt ctccgcggtg ggaggtaccc cgctgtcggt gtacgtgttc ggcatgttgc
     2881 gcaagggggt cacccccctc gtgaactccg tgtcggtcgt gatgttggcg gcgtccatgg
     2941 cattcgtcat ggcgtcgctc gtgatctccc gggcaacggg ctcggagagg gaggaaaggt
     3001 gagtgcaatg aggaagtgga ttcgaatcgt cgccctgttg ggcatcctca gcgtcgtagc
     3061 cgctagttgc ggcagcgatt ctgaggaagc tgcaggcgac ttcaagcagt gcgacgccgg
     3121 tgagaccgac ggtgacctgg cgttcttcaa ctggtcggag tacatggacc ctgacctgat
     3181 cgcggcgttc caggacgagt tcggggtcag cgtgaccgag gacttctacc cgtccaacga
     3241 agagatgttt gccaagatct cgcccggagg aacgggctac gacgtaatcg tcccgtcgga
     3301 ctacatgatc tcaatcctga ggtcggaagc tctgatccag cccatccaga aggacgcggt
     3361 acccaaccac gtcaacatcg ccgacaagtt cgccgatccg ccgttcgatc cggggaacac
     3421 ctacacgcag ccctatcagt ggggcaccac cggggtgggc gtggacctag gcgtgaccgg
     3481 gcacgacatc ccgctgacct ggggcctgct cttcgacgcc gacctcgccg agcagtacgg
     3541 cctgtcgggc aagatcagcc tgctggacga tccacgcgag accatgggtg cagcgctcaa
     3601 gtacctgggt tactcactga actccacgtc ggccgacgag ctggccgagg ccgaggcggt
     3661 catcgccgac gccgtcagcc gggtcgccgc cttcgattcg gaccagtaca gcgagctggt
     3721 ggtagccggg gagaccatcg ccggtcacgg ttacagcggc aacttcctct gggacttcga
     3781 ggagggtgag agcgagtaca cctacttcgt gcccgacgag ggtggcacgg tctgggtgga
     3841 cggcatggcc gtcctagttg acgcgccgca tccctgcacg gctttcgcct tcatcaactt
     3901 cctgttggac gcccacaacg gtgcgcaact gacgaacttc aactggtacg ccagccccaa
     3961 cggcgccgct gaggagttca tcgaccagga ggtgctcgac aaccagatca tctacccgtc
     4021 cgcggcgacg atggagcgcc tcgagttcat cgaggacacc ggtgagttcg agatcgagta
     4081 caccgacgct ctgaccaggg cgcgcggctg atccttcctc ccttccggtc ggcgggtcgg
     4141 ggtgcaagac gcacttccgg cccgccgacc gggcgggccc accgccggtt tcgggcggcg
     4201 ggacggcgag atgaaccaac gaacgatgat gggaacccga cgatgagcga gcaccagcgc
     4261 ctggctgaac tagccgagcg gcacctgtgg ggacacttct ctgtcctcaa gaacgacatt
     4321 gacgggaccc gggtcatcga gcgcggccag ggctgccacg tgtgggacgc cgaggggaac
     4381 cggtacctcg atggtctagc cggtttgttc gtcagccaac tggggcacgg tcgccctgaa
     4441 ctggctcggg cggccgggga ccaggcagcg acgctcgggt acttccccat ctggacctac
     4501 gggcacccga cggccattga actgtcggcc attctggctg gactggcgcc aggtgacctg
     4561 aaccgggtgt tcttcactac cggtggatcc gaggccgtcg agtcggcctg gaagctggct
     4621 cgccagtact tcaagttgaa gggcaagccc gacaaagtca aggtcgtcag tcggaacctc
     4681 gcctaccacg ggaccacgat gggtgcgctg tccatcaccg ggcttgattc catcaagacg
     4741 gtgttcgagc cgctagtgcc cggtgcgatc aaggtgcccg agaccaacca ctaccggtgc
     4801 ccgacctgtc aggacgaccc gcactgctcg ttgcacgcgg cagacgccat cgaagaggcc
     4861 atcatcaggg agggtcccga caccgtggct gccctgttcg ttgagccggt gcagaatgcc
     4921 ggcggctgct ttgtgccccc gcccggctat ttcgaccggg tccgtgagat ctgcaaccgt
     4981 cacgacgtgt tgctggtttc cgacgaggtc atctgcgcct acgggcgcat cggccacatg
     5041 ttcgggtgcg agcggtttgg ctacataccc gacgtgatca cctcggcgga gggcctcacc
     5101 tcgggctacg cgccgctcgg cgccatgatc gtgagtgacc gggtggctga gccctttgtg
     5161 ggcaccggcg actcgttcct gcacggcatc accttcgcgg gccatccggt gagctgcgcc
     5221 gtggcgctgg ccaacctcca gatcttccag gacgaaggca tcatcggcca cgtccagacg
     5281 aacgagtcgg ccttccgggc cgcgctagac gatctggctg atctgccga
//
LOCUS       DASCMR010000266         6833 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001318851, whole genome shotgun sequence.
ACCESSION   DASCMR010000266 DASCMR010000000
VERSION     DASCMR010000266.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 6833)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6833)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6833
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001318851"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..191
                     /locus_tag="QGG16_06295"
     CDS             <1..191
                     /locus_tag="QGG16_06295"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24918.1"
                     /translation="PRRRSSLRMNGSAFAGRRPDRAAMPTRGIVFGRSRSGSGGALLI
                     ATDGGYLTGNTADAVDQG"
     gene            complement(363..1715)
                     /locus_tag="QGG16_06300"
     CDS             complement(363..1715)
                     /locus_tag="QGG16_06300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HJP24919.1"
                     /translation="MSGDLFASAATERLARRAPLADRLRPTRLDDVVGQEHLLGPGRP
                     LRRLIEADRLSSVVLWGPPGTGKTSLARLIARVTAQEFAELSAVNASVKDVRELVASA
                     KARLGERDVGTILFLDEVHRFNKAQQDALLPSVESGLLVLIGATTENPFFEVNAPLLS
                     RSTLFRLEPLGPEALRRLLERGLAVEAVEADDDALDLLVDRAAGDGRHALTSLEVAAA
                     LAVGRAAEQPAEGSETRVVLADAEAALGTKALRYGRDAHYDVISAFIKSIRGSDPDAG
                     LYWLARMLDVGEDARFIARRLVILASEDVGMADPMSLVVADAAARAVEFVGLPEAKLN
                     LAQAVVHLATAPKSNRVTMALGAAEGDARAAGTGEVPIHLRDAHYRGAAQLGHGKGYD
                     YPHDHPEGWVEQRHRPAEVDGRRYYDPSQHGFENEIAERMRSTQPPEKGSDEEDPDNG
                     "
     gene            complement(1790..3529)
                     /gene="aspS"
                     /locus_tag="QGG16_06305"
     CDS             complement(1790..3529)
                     /gene="aspS"
                     /locus_tag="QGG16_06305"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HJP24920.1"
                     /translation="MTDYSTSMRTDRCGDLRVDDVGRQVTLCGWVDRRREHGEHLAFI
                     DLRDRSGVVQLVVDGAHDLRSEYVLQVSGTVRERPADTANDSLVTGAVEIDAVEVTVL
                     AAAEPPPFPIDERTDVDEMLRLKHRYVDLRRPRMQRNLEVRARVNSAVRGAMEEQGFV
                     EVETPMLIASTPEGARDFVVPSRKEPGSFYALPQSPQIFKQLCMVGGVDRYYQIARCL
                     RDEDLRADRQFEFMQLDAEASFVSQDDVLAFISHAVSAAAEAITGERPGEIPRMSWQE
                     AQERFGTDKPDIRFGMELVELTEVFAGTEFRAFQAPCVKGIRVPGGADASRNRLDDLT
                     EQCKGWGAKGLVWMRVTDDGLDSPVAKFLTDGEKAALGSTLEAEVGDLLLLVADERRT
                     VRHILGLLRLELGRPPVTEGGLHFLWVVDFPLFEGLDESGNPIPAHHPFTMPHTDDLD
                     ALERGDLLDVRSQAYDLVLNGWELGSGSVRIHRREIQEQIFSILGIESEEAHAKFGFL
                     LDAFRYGAPPHAGFAFGMDRLTAILAGEENIREVIAYPKTQSGGDPLTSAPTPIDGRH
                     LEELGLRVLPPAE"
     gene            complement(3526..4785)
                     /gene="hisS"
                     /locus_tag="QGG16_06310"
     CDS             complement(3526..4785)
                     /gene="hisS"
                     /locus_tag="QGG16_06310"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: protein motif:HMM:TIGR00442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004821 - histidine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006427 - histidyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HJP24921.1"
                     /translation="MSDHVFRAPKGTRDILWPDSARWRALVDVFAEVVGSAGYLEVIP
                     PMFEHVEVFQRLGETTDVVRKEMYSFEDKGGRTLALRPEQTASVVRGFSEHRPTLPYK
                     AWYAGPNFRYERAQKGRFRQFDQVGVEVLGPTDPHLDAEVISLAWRFYERLGLKQVTL
                     LVNSLGGPEDRARYVEALRAHFTAESDALSEESRATLEANPLRVLDSSREADAPLIDA
                     APRMVDHLSDDAAAHFAGVTAALDAVGVPYTVAPRLVRGLDYYVRTTFEFAAEALDAA
                     QNAVGGGGRYDGLAADLGAPETPGVGFALGVDRTLLACDAEGVFNAPAAAIDVFVVDA
                     TGGDEAVVVTDLIRTEGLRVDRAWDGRSMKAQMKAADRSAAALAVIVGEDEKAAGTVT
                     VRDLRGDGGQETVTRDQMIQTLRARLR"
     gene            complement(4865..>6833)
                     /locus_tag="QGG16_06315"
     CDS             complement(4865..>6833)
                     /locus_tag="QGG16_06315"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HJP24922.1"
                     /translation="TSISLDDLERDFGSDVRLIVDGVTKLERLHFDTREEQQAASVRK
                     MLVALAKDLRVLIIKLADRLHNMRTLAALPEHKQERVAQETLDIYAPLANRLGMQEVK
                     DQLEDLALATLHPKRYSQIDQMVQDRSPERDLYLAQVIGEVEGRLGEVGVTGEVDGRP
                     KQLWSIYEKMIVKGRPFEEIHDLVGVRVVVENVRDCYAALGTIHATWKPVQGRFKDYV
                     AMPKFNLYQSLHTTVVGPQGKQVEFQVRTYEMHARAEHGVAAHWDYKAQSPSDEMAWL
                     GRIVEWQAETEDPGTFMANLKTDLELDEVYVFTPKGRVVTLPLGATLVDFAYAIHTDV
                     GHACVGAKVGGRLVPLETELVTGDTVEVVTSRQPGAGPSRDWLQFVATHRASSKIKHW
                     YSQERRTEAIDAGHEELTNELRRAGLPIREVLDGPELAAVAASMNYHEPDTLYAAVGE
                     HHVSARSLVGRVANVLRPDEDDEVTAIPVKTRRPRRDTDRVGVHVEGLDDMLVRLSRC
                     CTPVPPDEIMGFVTRGRGVSVHRSDCANAVSLMAEQGDRLIDVDWGGEMGSHFVVSVD
                     LKALDRPGLLRDVTGVLADHQVNVLSTTTSTSGADRVATMRFDFEIVDPTHLETLLRM
                     LRRVDSVYDVHRAVQGSPDLVDDADGSTDKG"
BASE COUNT         1098 a         2337 c         2246 g         1152 t
ORIGIN      
        1 aacctcggcg acggtcctcg ctccgaatga acggctcagc gttcgccggg cgtcgaccgg
       61 atcgggcggc gatgccgacg cggggaatag tgttcggacg atcgcgctcc ggttcgggtg
      121 gcgccctcct catcgcgacc gacggcggct acctgaccgg caatacggcg gacgctgtcg
      181 accaaggctg aacttcggtc cgagacctca tgacggagtc gagccggtgc gtaacggcga
      241 atcgcctgac gggcccttcg acgcaaccat gcggccgaca gggtgccgac gacccatccg
      301 cccatcagcc agagcagtcg tcgacgcatc agaccgaacc aaccggtcga cgggtgtcca
      361 gatcaaccat tgtcaggatc ctcctcatcc gaacccttct ccggaggctg tgtggaccgc
      421 atgcgttcag caatctcgtt ctcgaagcca tgttgggatg gatcgtagta gcgacgccca
      481 tcgacctccg ctgggcgatg acgttgttcg acccaaccct caggatggtc gtgcgggtag
      541 tcgtatccct tgccatggcc caactgggcg gccccccggt agtgggcgtc acgcaggtga
      601 atcgggacct cgccggtgcc tgccgcccgg gcatcgccct ctgcggcgcc gagcgccatg
      661 gtcacccggt tggacttggg ggccgtggcc aggtggacca cggcctgggc cagattcaac
      721 ttcgcctcag gaaggcccac gaactcaacg gcccgggcgg ccgcgtcggc aaccacaagg
      781 ctcatcggat cggccatgcc gacgtcttca ctggccagga tgaccagccg gcgggcaatg
      841 aaccgggcgt cctcgccgac gtcgagcatc cgggccagcc agtacagacc ggcatcggga
      901 tccgagcccc ggatgctctt gatgaaagca ctgatcacgt cgtagtgggc atcgcggccg
      961 taacgcagcg ccttggtgcc cagtgccgcc tcggcatcgg ccagcactac ccgggtttct
     1021 gaaccctcgg ccggctgctc cgctgcccga ccgacggcca gcgcagccgc cacttccaga
     1081 ctggtcaggg catgtcgacc atccccggcg gcccggtcga ctagcaggtc cagcgcatca
     1141 tcgtcggctt cgacggcctc gacggccagc ccccgttcca ggaggcgccg caacgcttcg
     1201 ggccctagag gctccagtcg gaacagggtg gaacgcgaca gcaacggggc gttgacctcg
     1261 aagaacgggt tctcggtggt ggccccgatg agcaccagta gtccggactc caccgacggt
     1321 aggagggcgt cctgctgggc cttgttgaac cgatggacct cgtcgagaaa caggatggtg
     1381 cccacgtcgc gttcacccag acgggctttt gccgaagcca ccagttcccg gacgtcctta
     1441 acgctggcgt tgacggccga gagttcagcg aactcttgag cggtcacccg cgcgatgagt
     1501 ctggccaggg acgtcttacc tgttcccgga ggaccccaga gcaccactga tgacaggcgg
     1561 tcggcctcga tcagtcgccg taggggacgt cccgggccca gaaggtgctc ctggccgacg
     1621 acgtcgtcca acctggtcgg ccgcaggcgg tcagccaacg gcgcccggcg agccaggcgt
     1681 tcggtcgccg cgctggcgaa gaggtctccg gacacggtcg gacggtaccc ggcagtccgg
     1741 ttgtctggcg ggacggccat tccacctgag gctgttcctg ggcgggggcc tattccgccg
     1801 ggggaaggac ccgcagacct aactcctcga ggtgtcgacc atcgatgggc gtcggtgcgc
     1861 tggtcagcgg gtctccccct gactgggtct tggggtaggc gatgacctcg cggatgttct
     1921 cctcgccagc caggatggcc gtgaggcgat ccatgccgaa ggcgaagccg gcgtgtggcg
     1981 gagcgccgta ccggaaggcg tcgagcagga agccgaactt ggcgtgcgcc tcctcggatt
     2041 cgatccccaa gatggagaaa atctgctcct ggatctcacg gcggtggatc cggacgctgc
     2101 cggagcccag ttcccatccg ttcagtacga ggtcgtaggc ctgcgagcgc acgtccagca
     2161 ggtcgccccg ctcgagcgcg tccaggtcgt cggtatgcgg catggtgaac gggtgatggg
     2221 ccgggatggg gttccccgac tcgtcgagtc cctcgaacag ggggaagtcg accacccaga
     2281 ggaagtggag tccaccctca gtgaccggcg gacgacccaa ctcgaggcgc agcaggccca
     2341 ggatgtgtcg aaccgtccgg cgctcgtcgg ctaccagcag aagcaggtcg ccgacctcgg
     2401 cctccaacgt ggagcccagc gccgccttct cgccgtcggt caggaatttg gccaccggtg
     2461 agtccaggcc atcgtcggtg acccgcatcc acacgaggcc cttggcgccc cagcccttgc
     2521 attgctcggt caggtcgtcg agccggttgc gggacgcatc ggcgccaccg ggcacccgta
     2581 tgcccttcac gcagggcgcc tggaaggcgc ggaactcggt gccggcgaac acctcggtga
     2641 gctcaacgag ttccatgccg aaccggatgt cgggcttgtc ggtcccgaac cgctcctggg
     2701 cctcttgcca cgacatccgc ggaatctcgc cgggccgctc cccggtgatc gcttcggcgg
     2761 cagccgagac ggcgtgggag atgaaggcca gcacgtcgtc ctgggaaacg aagctcgcct
     2821 cggcatcgag ctgcatgaac tcgaactggc gatcggcccg gaggtcctcg tcacggaggc
     2881 agcgggcgat ctggtagtag cggtcgacgc cacccaccat gcagagttgc ttgaagatct
     2941 gggggctctg gggtagggcg taaaacgagc cgggttcctt gcgtgacggg accacgaagt
     3001 cgcgggcccc ttcgggcgta ctagctatga gcatcggcgt ctcgacctcg acgaacccct
     3061 gctcctccat tgcgccacgt accgcgctgt tgacccgggc ccggacctcg aggttgcgct
     3121 gcatcctggg gcgccgcagg tcgacgtacc ggtgcttcag gcgcagcatc tcgtcgacgt
     3181 cggtgcgttc gtcgattggg aagggcggcg gctcagctgc cgcaagcacg gtcacctcga
     3241 cggcgtcgat ctcgaccgcg ccggtcacca acgaatcatt ggccgtgtcg gccggacgtt
     3301 cgcgcacggt cccgctgacc tgcagcacgt actcgctgcg gaggtcgtgg gcgccgtcga
     3361 ccaccagctg gacgacaccg gagcggtccc tcaggtcgat gaacgccagg tgctcgccgt
     3421 gctcgcgtcg tcggtcgacc cacccgcaca gggtgacctg gcgacccacg tcgtcgaccc
     3481 ggaggtctcc gcagcggtcg gttcgcatgg aggtggaata atcggtcaac gcagcctcgc
     3541 tcgtagggtc tggatcatct ggtcccgggt gacggtctcc tgtccgccgt caccccggag
     3601 gtcccgcacg gtcaccgtgc cggccgcctt ttcgtcttcg cccacgatga ctgccagcgc
     3661 agcggcgctg cggtcggcgg ccttcatctg ggccttcatg gaccgtccgt cccacgcccg
     3721 gtcgacccgc aggccttccg tgcggatcag gtcggtcacc accacggcct cgtcaccacc
     3781 tgtggcatcg accacgaaca cgtcgatggc tgctgccggt gcgttgaaca ctccctcggc
     3841 gtcgcacgcc aacagggttc gatccactcc gagggcgaat cccacacccg gggtctccgg
     3901 cgcaccaagg tcggccgcca gaccgtcgta gcgtccaccg ccacccaccg cgttctgcgc
     3961 ggcgtcgagt gcctcggcgg cgaattcgaa ggtggtacgg acgtagtagt cgaggccacg
     4021 gaccagccgt ggcgccacgg tgtagggcac gccgacggca tcgagcgccg cggtcacacc
     4081 ggcgaagtgg gccgccgcgt cgtcggacag gtggtcgacc atccggggag cggcgtcgat
     4141 gagcggtgca tcggcttccc gactggaatc cagtacccgc aacgggttgg cctccaaggt
     4201 ggcccgcgat tcctcgctca gggcgtcgct ctccgcggtg aagtgggccc gcagtgcctc
     4261 gacataccgg gcgcggtctt cggggccacc cagcgagttc accagcaggg ttacctgttt
     4321 caggcccagc cgctcgtaga agcgccacgc cagggagatg acctcggcat cgaggtgcgg
     4381 gtcggtcggg cccaggacct ccacccccac ctggtcgaac tgtcggaaac ggcccttctg
     4441 cgcccgctca tatcggaagt tgggcccggc gtaccaggcc ttgtacggca gcgtgggtcg
     4501 atgctcggag aatccgcgga ccaccgatgc ggtctgctcg ggccgcagcg ccagagtccg
     4561 tccacccttg tcctcaaagg agtacatctc cttgcggacg acgtcggtgg tctcgccgag
     4621 acgctggaac acctcgacgt gttcgaacat cggcgggatg acctcgaggt accccgcgga
     4681 gccgaccacc tcggcgaaga cgtcgactaa ggcacgccac cgggccgagt ccggccagag
     4741 gatgtcacgg gtgcccttcg gggcgcggaa aacgtggtcg gacacggtga tggaggctac
     4801 cggcgctcca agcggcactc ggcgacgttg ccgtctctct ggccccgggc agtcagcccc
     4861 cgcttcagcc cttgtcagtg gaaccgtcgg cgtcgtcgac caggtcgggc gaaccctgca
     4921 ctgcacggtg cacgtcgtag accgaatcga cacgacgcaa catccgcaac aaggtctcga
     4981 ggtgtgtcgg gtccacgatc tcgaagtcga agcgcatggt ggccacccgg tcggcaccac
     5041 tggtcgacgt cgtggtggac aagacgttga cctggtggtc ggccaggacg ccggtgacgt
     5101 cgcgcagcag tcccggtcgg tcgagtgcct tgaggtccac agagaccacg aagtggcttc
     5161 ccatctcgcc gccccagtcg acgtcgatga gtcggtcgcc ctgttcggcc atcagtgaca
     5221 ccgcgttggc gcagtccgac cggtgcacgc tcaccccgcg accgcgggtc acgaacccca
     5281 tgatctcgtc gggcggcacc ggcgtgcagc acctcgacag ccgcaccagc atgtcgtcca
     5341 gcccttcgac gtggaccccc acccggtcag tgtccctgcg aggccgtcgg gtcttgaccg
     5401 gaatcgccgt gacctcgtca tcctcgtcgg gtcgcagcac attggccacc cgaccgacca
     5461 gcgaccgggc cgacacgtga tgctcgccca ccgccgcgta caacgtgtcg ggctcgtggt
     5521 agttcatcga cgcagccacc gcagccagct cgggcccgtc gagcacctcc ctgatgggca
     5581 gcccggcccg ccggagttcg ttggtgagtt cctcatgacc ggcgtcgatt gcctcggtcc
     5641 gtcgctcctg tgagtaccag tgcttgatct tgctggatgc ccggtgggtg gccacgaact
     5701 gcaaccagtc ccggctgggt ccagcccccg gctgacggga cgtcaccacc tcaactgtgt
     5761 cgccagtgac tagttccgtc tccaggggga cgagccggcc ccccaccttg gcgcccacgc
     5821 aggcatgtcc gacgtcggtg tggatggcgt aggcgaagtc gaccaacgtg gcccccagcg
     5881 gaagagtcac cacccgcccc tttggcgtga agacgtagac ctcgtcgagt tccagatcgg
     5941 tcttcaggtt ggccatgaag gtgccggggt cctccgtctc ggcctgccac tccacgatcc
     6001 gacccagcca tgccatctcg tcgctcggcg attgggcctt gtagtcccag tgggcggcca
     6061 ccccgtgctc ggccctggcg tgcatctcgt aggtgcgtac ctggaactcc acctgcttgc
     6121 cctggggccc gacgacagtg gtgtgcagcg actggtacag gttgaacttg ggcatggcca
     6181 catagtcctt gaagcgtccc tgcaccggtt tccaggtggc atggatggtg cccaacgctg
     6241 cgtagcagtc gcgcacgttc tcgaccacga cacgcacccc aaccaggtcg tggatctcct
     6301 cgaagggccg acccttcacg atcatcttct cgtagatgct ccacagctgc ttcggtcgac
     6361 cgtcgacctc gccggtgacg cccacctcgc cgagccgacc ctcgacctcg ccgatgacct
     6421 gtgccaggta caggtcgcgc tccggcgacc ggtcctggac catctggtcg atctggctgt
     6481 agcgcttggg atgcagagtg gccagcgcca ggtcttccag ttggtccttg acctcctgca
     6541 tgcccagtcg gttggccagc ggggcgtaga tgtccagagt ctcttgggcc acccgttcct
     6601 gcttgtgttc gggcagcgcg gccagggttc gcatgttgtg gagtcggtcg gccaacttga
     6661 tgatcagcac acgaaggtcc ttggccaggg cgaccagcat cttgcggacg ctggccgcct
     6721 gctgttcttc gcgggtgtcg aagtggaggc gctccaactt ggtgacgccg tccacgatga
     6781 gccggacatc ggaaccgaag tcccgctcga ggtcatcaag ggagatggag gtg
//
LOCUS       DASCMR010000267         4139 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001319188, whole genome shotgun sequence.
ACCESSION   DASCMR010000267 DASCMR010000000
VERSION     DASCMR010000267.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4139)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4139)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4139
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001319188"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(145..2943)
                     /locus_tag="QGG16_06320"
     CDS             complement(145..2943)
                     /locus_tag="QGG16_06320"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HJP24923.1"
                     /translation="MSAASWIVAAETGDWTGRAEGVGLSDTRVLDQFQLPIGHWFDQM
                     VDWMDVNAEWFLNAVKWPFEFLLENFVNDFLLTLPWYQVVIFTAILGSLLRTPKIGIM
                     AAAGLTMCGLLGAMYWVETMRTIGMVLVAVGLCALIGIPLGVICARVDSIWNVTRPVL
                     DAMQTVHTFVYMVPFVFFFSIGVVPATMVTMIYALPPLVRMVNLGIRHVPEDVVEASR
                     AYGATELRVLTDVQLPLAKPSIMAGLNQTLMLAIAMVGIAAIMGASGLGLLVFRAVQN
                     LDVGLGISSGLALWTVAVVLDRLSQPEEGGGDNLLTRIREAMANRRDPEELLKKIEAA
                     ETDDQKAAKVVHVEHEVVAGARERLGMAVVGLAGVVAVLSTLMTWGSGAGLFSSHSRA
                     VDIDLAGQSFNGYQASGGSWSGMVVLFLGFFSVMAAGSCLTWTGGIGRLRGPGGLAAA
                     AVGVLAAVFAYPILGQFDGYTTLSNLEGHEAQAVWAVAIEVLAIPAILGLVLGLAGAA
                     VPLRWRTVGIWAFTAGILGHYFESPLGLDALVVAILVVVVIAVAVSLLGRTSLLDVTR
                     GTWNDLAAGGVIAVLGVTAAPVTSLLDVKDVVALAAVAVIYRLVSQRSDQRTSLVVAV
                     VGAVFLRWLVIGSVGSGDSALFLDTQILATVAIGFLVAGTVRSGSRWFGADIMVITSA
                     CMLISSLTYRVASPHADVEGYSHGGGSMVAIVASIVMLVGALLALQTAPYSAFRPLER
                     VVAWGRMGTGILAVALVVIGGFSAWTYDERVNDELPPELVEEMERLRAEAKENPALAA
                     TNTSKVTSLRNKFRRNAQTITDGYSDEGAGLSRLAIAVAAIGALLTIPSSGLAGLDEN
                     RRWRWSAAVAAAGGGLALIGIVWVASLARVSDLNVVTGAGAFLTMFSGAILAVTSKKI
                     LLEFRRNKTYDDVEAAAV"
     gene            complement(2940..>4139)
                     /locus_tag="QGG16_06325"
     CDS             complement(2940..>4139)
                     /locus_tag="QGG16_06325"
                     /inference="COORDINATES: protein motif:HMM:TIGR01186.1"
                     /note="Members of the family are the ATP-binding subunit
                     of ABC transporters for substrates such as betaine,
                     L-proline or other amino acids, choline, carnitine, etc.
                     The substrate specificity is best determined from the
                     substrate-binding subunit, rather than this subunit, as it
                     interacts with the permease subunit and not with substrate
                     directly; Derived by automated computational analysis
                     using gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0015837 - amine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="betaine/proline/choline family ABC transporter
                     ATP-binding protein"
                     /protein_id="HJP24924.1"
                     /translation="IALENVYKIFGPNPRGRAFDLCSSDVGKDEVQRQTGHVVGMHDI
                     SFSVNKGEIFVVMGLSGSGKSTAIRTVNKLHDTTHGRVMVEGTDVQELTGAALQSFRR
                     EKLAMVFQHFALFPHRNVIDNTAYGLKVQGVEKRERHEAAIEALAMVGLEAYAFNSTR
                     QLSGGMQQRVGLARALCSNPEILLMDEAFSALDPLIRRQMQDELMAIQSKLHKTILFI
                     THDLNEALRIGNRVCILRDGKVIQIGTPEEILTQPADGYVAEFVQDVDQGRVIDVGKV
                     MNQPVILDPSRTLTECVDAMGDRRGGFCCDADGRPTALLAMTDAATALAHGTTDLTSV
                     LRSDFDTTTAEARFNDNYAAAGRGLPIAVLDETGRIVGELEPREIMEEMGRVEQLVAG
                     FEREVFL"
BASE COUNT          834 a         1371 c         1287 g          647 t
ORIGIN      
        1 gatgctcgtc catgagacgg acgatctcgg gctcgacgct ggcgaccaac tcaaacgact
       61 cagtggaggc tgtcacgggg atccgatcag ggagaaagcc gacgggggcc ggtcagcaca
      121 atgctacggc caccatcggc atcctcagac tgcggccgcc tcgacgtcgt cgtaggtctt
      181 gttccgacgg aactccagca gaatcttctt ggaggtcacc gccaggatgg ccccggaaaa
      241 catcgtcagg aacgctccgg caccagttac cacgttcagg tccgagaccc gggccaggct
      301 ggcgacccag acgataccga tgagcgccag gccgccgccg gcggccgcca ccgcggcgct
      361 ccacctccat ctcctgttct cgtccaatcc agcgagcccc gaagacggaa tggtcaggag
      421 ggcgccgatg gccgccaccg cgatggctag ccgggacagc ccagccccct cgtcgctgta
      481 gccgtcggtg atcgtctgcg cgttccgacg gaacttgttg cgaagcgacg tgaccttgct
      541 ggtgttggtc gcggccaacg ccgggttctc cttggcctcg gcacggagtc gctccatctc
      601 ttccaccagt tcgggaggaa gttcgtcgtt gacacgctcg tcgtacgtcc acgccgagaa
      661 cccaccgatg acaactaggg ccacagcgag gatgcccgta cccatgcgac cccaggcgac
      721 cacacgctcg agcggtcgga atgccgagta cggggccgtc tggagagcca gtagggcacc
      781 gacaagcatg acgatgctgg ccacgatggc caccattgat ccgccaccgt ggctgtagcc
      841 ctcgacatcg gcgtggggcg acgccacccg gtaggtgagt gaggagatca gcatgcaggc
      901 cgacgtgatg accattatgt cggccccgaa ccagcgggat cccgaccgga cggtgccagc
      961 caccagaaac ccgatggcca ccgtggccag aatctgggtg tccaggaaga gggccgaatc
     1021 gccactgccg acgctgccga tcacgagcca gcggaggaac accgccccca ccacggccac
     1081 caccagcgat gtccgctggt ccgatcgttg gctgaccagc cggtagatca ctgcaacagc
     1141 ggccagggcc accacgtcct tcacatccag gaggctggtc accggggccg cggtgacacc
     1201 caacacggcg atcaccccac cggcagccag gtcgttccaa gtcccgcgag tgacatccag
     1261 aaggcttgta cgccccagga ggctcacagc aacagctatg acgaccacca cgaggatggc
     1321 taccacgagg gcatcgaggc ctagcggaga ttcgaagtag tggccgagga tcccagcggt
     1381 gaacgcccag atcccgacgg ttcgccaacg gagtggcacg gccgccccag ccagtccgag
     1441 gaccaagccc agaatggccg gaatggccag gacctcgatt gccactgccc agacggcctg
     1501 cgcttcatgg ccttcgagat tcgacaacgt cgtatagccg tcaaactggc cgaggatcgg
     1561 gtaggcgaac acggcggcaa gtacgccgac cgccgccgcg gccaggccac cggggccacg
     1621 gaggcgcccg atgccccccg tccaggtcag gcaagaaccg gcagccatga ctgagaagaa
     1681 gcccaagaac aggacgacca tgcctgacca actaccaccg gaggcttggt agccattgaa
     1741 cgactggccg gcaaggtcaa tgtcaaccgc ccgtgagtga ctggagaaca gtcccgcacc
     1801 gctgccccag gtcatgaggg tggagagaac ggccactacc ccggccaagc ccacgacggc
     1861 cataccgaga cgctcgcggg ccccagcgac aacctcgtgc tccacgtgga cgaccttggc
     1921 cgccttctgg tcatcagtct cggcggcctc gatcttcttg agaagttcct cgggatcccg
     1981 acggttggcc atggcctcac ggatccgggt cagcagattg tcaccgccgc cttcctcggg
     2041 ctgggacagc cggtcaagga cgacagccac ggtccacagg gccaggccgg atgagatacc
     2101 gaggcccacg tccaggttct ggacggcccg gaagaccaga agaccgaggc ccgaagcccc
     2161 catgatggct gcgataccca ccatggcgat ggccagcatc agggtctgat tgaggcccgc
     2221 catgatcgac ggcttggcca gcggcagctg cacgtcggtg agcacccgga gttcggtggc
     2281 gccgtaggcc cgactggcct ccaccacgtc ctcaggaacg tgtcggatac caaggttcac
     2341 catgcgaact agcggcggca gggcgtagat catcgtcacc atggtcgccg ggacgactcc
     2401 gatgctgaag aagaacacga acggcaccat gtagacgaac gtgtggaccg tctgcatagc
     2461 gtccagaact ggtctggtca cgttccatat cgagtccaca cgcgcgcaga tcacgcccag
     2521 tgggataccg atcagagcac acaatccgac ggcgacgagc accatgccga tggtccgcat
     2581 ggtctcgacc cagtacatgg cgcccagcag gccgcacatc gtcagcccag cggcggccat
     2641 gatgccgatc tttggggtcc ggagcagtga cccgaggatc gccgtgaaga tgaccacctg
     2701 gtaccagggg agggtcagaa ggaagtcgtt gacgaagttc tccaggagga actcgaacgg
     2761 ccacttgaca gcgttgagga accactcagc gttgacgtcc atccagtcga ccatctggtc
     2821 gaaccagtgg ccgatcggca actggaactg atcgaggacc ctggtatcgg acaacccgac
     2881 gccctcggcc cgacccgtcc aatcacccgt ctcggcggcg acgatccaac tcgcggcgct
     2941 cacaggaaca cctcccgctc aaagccagct accaactgtt cgacgcgtcc catctcttcc
     3001 atgatctccc ggggttcgag ctcgccgacg attcgacccg tttcatccag gacggcaatc
     3061 gggagtcccc gaccagccgc cgcatagttg tcgttgaacc gtgcctcagc ggtcgtggtg
     3121 tcgaagtccg atcgcaggac ggacgtcagg tcagtcgtac catgggccag tgcggtagcc
     3181 gcatcagtca tggccagcaa ggcggtgggc cgaccgtcag catcgcagca gaagccgccc
     3241 cgtcggtcgc ccatggcgtc cacacattcg gtgagggtgc gggacggatc caggatgacc
     3301 ggctggttca tgaccttgcc cacgtcgatg acccgaccct ggtcgacgtc ctgcacgaac
     3361 tcggccacgt agccgtcggc cggctgggtc agaatctcct cgggggtacc gatctggatg
     3421 accttgccgt cgcgcaggat gcatacccgg ttgccgatcc gcagggcctc gttcagatcg
     3481 tgggtgatga acaagatcgt cttgtggagt ttggactgga tggccatcaa ttcgtcctgc
     3541 atctggcgac gaatcagcgg atccagggcg ctgaacgcct cgtccatgag caggatctcc
     3601 gggttggagc acagagcgcg ggccaagccg acacgctgtt gcattccgcc cgagagctga
     3661 cgggtggagt tgaaggcgta ggcctcgaga ccgaccatgg ccagggcctc aatggccgcc
     3721 tcgtggcgtt cccgcttctc cacgccctgg accttgagcc cataggccgt attgtcaatc
     3781 acgttgcgat gggggaacaa ggcaaagtgc tggaacacca tggccagctt ctcgcggcga
     3841 aaggactgca gggccgcccc agtcaactcc tggacgtcgg tgccctccac catgacccgc
     3901 ccgtgggtgg tgtcgtggag cttgttgacc gtccggatgg ctgtggactt gccggaaccc
     3961 gaaaggccca tgaccacgaa gatctcgccc ttgttgacag agaaggagat gtcgtgcatg
     4021 ccgaccacgt ggccggtctg gcgctgcacc tcgtccttcc cgacgtctga cgagcagagg
     4081 tcgaaggccc gaccccgcgg attcgggccg aagatcttgt agacgttttc cagtgcgat
//
LOCUS       DASCMR010000268         2528 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001327906, whole genome shotgun sequence.
ACCESSION   DASCMR010000268 DASCMR010000000
VERSION     DASCMR010000268.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2528)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2528)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2528
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001327906"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..249)
                     /locus_tag="QGG16_06330"
     CDS             complement(<1..249)
                     /locus_tag="QGG16_06330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24925.1"
                     /translation="MSMVVGAAVVTVVSAVVTVVSAVVTVISAVDVTGAAVVTVDVAV
                     AVDVAVAVDVAVAVVAVVGAATSPLEAHPARRATVSSQT"
     gene            218..1414
                     /locus_tag="QGG16_06335"
     CDS             218..1414
                     /locus_tag="QGG16_06335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24926.1"
                     /translation="MTTAAPTTIDISAVQTAEQLQAYVAEAAGFSQVEAAWLLPDDLD
                     PQAGGAPGYTRYVFRETSAGVVPTLVEGPVGDQVRCQDPDLPCSYLELKELHESGGSI
                     PEELELHPDELGALVAELDELNAFMDEHRDVDDACRAGHVSDRIQTPNMGSHFYNLSS
                     MRRGFDPGSPQILLYTLADDSLPNGALGQCSEGRWIGEPMQLVGTAFVISPEIIGFDH
                     PEGFTGGLDNWHSHFNLCRGNRKGVDQFVSREECAGLGGQFHDAIGWMLHAWVDPAHD
                     NQLGVFSMWNSSITPFLGDADIRSASMVRGSDFPEDARQSLITNFAFESAIKVTAGEA
                     VYFNNSDSVPHTVSAGTPDDPVLDSFDSGLLDPGDNWQLNTSTPGTYSYFCALHPDMT
                     ATIIVN"
     gene            complement(1459..2343)
                     /locus_tag="QGG16_06340"
     CDS             complement(1459..2343)
                     /locus_tag="QGG16_06340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24927.1"
                     /translation="MTDWTGLTARTGRAGHDLVGWLMWDPVAISAYEALGVPNGNGWI
                     QAWRLAPLGDIPSAAVAAATYSINPRIVETILGLWRSVTDAEAICAVRDAAVAPGLES
                     IAPGLSDALAPLAKDLWRGADAVHHGARPLFAACRDQPRPDNTQPALSAWLAANCLRE
                     LRGDNHWALCASEELDDVEVGLLHSAMVDTNEYGGEEWIARSRGADDEAVARGWRRLE
                     AKGLATDGALNQTARQFRLELEDRTNRLTEPAWREVGEAATQAFCQAVEPHHEAFVAR
                     INATAGERWMPALRHRPT"
BASE COUNT          436 a          845 c          785 g          462 t
ORIGIN      
        1 cgtctggctg ctaacggtgg ccctcctcgc cggatgcgcc tccaacggcg aggtggctgc
       61 acccaccacc gcgacgaccg cgaccgccac gtccaccgcg accgccacgt ccaccgcgac
      121 cgccacgtcc accgtgacga ccgcggcgcc ggtcacgtcc actgcggaga tcaccgtgac
      181 cactgcggag accaccgtga ccaccgcgga gaccaccgtg accaccgcag cgcccaccac
      241 catcgacatc agcgccgtcc agactgccga gcagcttcag gcgtatgtgg ccgaggcagc
      301 cgggttctcg caggtcgaag ccgcctggct cctgccagac gacctggacc cccaggcggg
      361 cggcgcccct ggttacaccc gctatgtctt tcgtgagact tctgccggcg tggtgcccac
      421 gctggtggag gggccggtcg gcgaccaggt ccgctgccag gatcctgacc tgccctgttc
      481 gtaccttgaa ctcaaggagt tacacgagag cggtgggagt attcccgagg aactggagct
      541 gcaccccgac gaactgggcg cgttggtcgc cgagttggac gaactgaacg ccttcatgga
      601 cgagcaccga gacgtcgacg atgcctgtcg cgccggccac gtttccgacc ggatccagac
      661 cccgaacatg ggatcgcact tctacaacct ctccagcatg cgacggggct tcgacccggg
      721 cagcccacag atcctgctct acacgctggc tgacgactcc ctgccgaatg gggcgctggg
      781 ccagtgctcg gagggcagat ggataggcga gcccatgcaa ctggtgggca cggcgttcgt
      841 catttcgcca gagatcatcg gcttcgacca ccccgaaggc tttaccggcg gattagacaa
      901 ctggcactcg cacttcaatc tctgccgcgg caaccgtaag ggcgttgacc agttcgtgag
      961 ccgggaggag tgtgctggcc tgggtgggca gttccacgac gccatcggct ggatgctcca
     1021 tgcgtgggtg gatcccgccc acgacaacca gttgggtgtc ttctcgatgt ggaactcctc
     1081 gatcaccccg ttcctgggag acgccgacat tcgctcggct tcgatggtgc gcggtagcga
     1141 cttcccagag gacgcccgcc agtcgctcat taccaacttc gccttcgagt ccgctatcaa
     1201 ggtgaccgcc ggcgaggccg tctacttcaa caacagcgac tcggtgcccc acacggtcag
     1261 tgccggcacc cctgacgacc ccgtcctcga ctccttcgac tcgggccttc tggaccccgg
     1321 cgacaactgg cagttgaaca cttcgacgcc gggcacctat agctacttct gcgccctaca
     1381 ccccgacatg actgccacca tcatcgtcaa ctgaggttgg ccaggttttc ttcacgggtg
     1441 aagccgtgat ccccggtgtt aggtcgggcg gtgtcgaaga gcgggcatcc agcgttcacc
     1501 agcggtggcg ttgatccgag caacgaacgc ttcgtgatgg ggctcgacag cctgacaaaa
     1561 cgcttgcgtg gcggcctcgc ctacctctcg ccacgctggt tcagtcaacc tgttggtgcg
     1621 gtcttctagc tcgaggcgaa actgacgggc tgtctggttc agggctccat cagttgctaa
     1681 gcctttcgct tccagacggc gccacccgcg tgccacggcc tcatcgtcag cacctcgact
     1741 tcgggcgatc cattcttcgc cgccgtactc gttggtgtcg accatggccg aatggagaag
     1801 tccgacttcg acgtcatcga gttcttcaga cgcgcacagg gcccagtggt tatcgccgcg
     1861 gagctcgcga aggcagttgg ccgccaacca ggctgacagt gcgggttgag tgttatcagg
     1921 tcgtggctgg tctcgacagg ccgcgaaaag gggacgggct ccgtggtgca cggcgtcggc
     1981 accgcgccaa aggtctttgg ccagtggggc gagggcatca ctcaaccccg gagcgatgga
     2041 ttccaggccg ggtgcgacgg cggcatcgcg cactgcacag atggcctcag cgtcagtgac
     2101 gctgcgccag aggccgagga tggtttccac gatccgtgga ttgatcgagt atgtggccgc
     2161 cgcaacggcg gccgaaggaa tgtcccctag gggtgcgagt cgccatgcct ggatccagcc
     2221 attgccgttc gggacgccca gggcctcgta ggcgctaatc gcaaccggat cccacatgag
     2281 ccagccgacg aggtcgtgac ctgcgcggcc ggtcctcgct gtcaatccgg tccagtctgt
     2341 catcggcttt gctccgtctg cctgctactc ggtgatgccg agcagaggga ttcccgacga
     2401 ggcctatgtg ggtggcgcgc tcggagggac tcgaaccccc aaccttctga tccgtaggta
     2461 gggccacggg gatctccagt tgggtgaatt gtgctctgaa cagcccattc tacaaccggt
     2521 ctgtgtct
//
LOCUS       DASCMR010000269         6897 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001329115, whole genome shotgun sequence.
ACCESSION   DASCMR010000269 DASCMR010000000
VERSION     DASCMR010000269.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 6897)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6897)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6897
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001329115"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..2142
                     /gene="valS"
                     /locus_tag="QGG16_06345"
     CDS             <1..2142
                     /gene="valS"
                     /locus_tag="QGG16_06345"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HJP24928.1"
                     /translation="ERCQRVSQRAFLRNLARGEAYQIEAPSLWDVTHRTAVAQAELED
                     RERPGAYHRLAFHLPTGTTNHDGSGDLHIATTRPELLAACVALVAHPDDERYQPLFDT
                     TATTPVFGVEVPIMAHELADPDKGTGIAMICTFGDTTDVTWWRELDLDVRAIINRAGR
                     VNPEPPPGIETDAGLAAYARLAGKTVFSAQAEMVELLREAGDLIGEPEPITHPVKFFE
                     KGDKPLEIVTSRQWYIRNGGRDVDLRAELVARGDQMQWHPAYMQTRYTNWIDGLNGDW
                     LVSRQRFFGVPLPLWYQLDADGEPVHDTPITPDEADLPIDPSSDAAPGYDESQRGQPN
                     GFIGDSDVMDTWATSSLTPQIACGWEEDDDLYARTYPMDLRPQAHDIIRTWLFSTAVR
                     SHFEADTAPWGHCALSGWILDPDRKKMSKSKGNVVTPVDLLDQHGSDAVRYWAAKGRP
                     GTDTAFDDDQMKIGRRLAIKVLNASRFALGFGADGDTPLAIDPAAITHPLDRAMLLRL
                     ADLVDEATRAFDGFDYARALERTETWFWTFTDDHVELVKNRAYEGDEAGAESARHALR
                     LALSTLLRLFAPFLPFVTEEVWSWWQGGSIHRQSWPSADELRAAAEGTGDGADNNPVD
                     PAIAEVAAAALVEIRRHKTTEKRSLATPVIACTLTDTPERLALLRPALGDVAAAARAT
                     DIHLSEGDTLSVHVELAPTEHRPEAAEPSAD"
     gene            2176..2982
                     /locus_tag="QGG16_06350"
     CDS             2176..2982
                     /locus_tag="QGG16_06350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HJP24929.1"
                     /translation="MADTTSPPDFRTIAVTCDGRRGTLTLNRPDRLNALSNELMAEVA
                     DAAAWFDHQSDLRVVVVRGEGRAFSAGFDLTVFGDDGPSPAGGRVPSDTGRLMADALE
                     RTSPVLIAAMHGHVVGGGLVIGAACDLRIATADVSFSIPEVDLGIPLAWGGIPRLVRE
                     IGPALTKELVMTCRPFSAAEAMAAGFLNRVVPADELDAAVEELAEAVASRPRGAVLAT
                     KRHVNAVTDQMVGTGRSWSDADGLTAALRDPEGRASRESYMERLQAKKQK"
     gene            2992..4590
                     /locus_tag="QGG16_06355"
     CDS             2992..4590
                     /locus_tag="QGG16_06355"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HJP24930.1"
                     /translation="MPIADRLFINATFHTLDSTSPDGSPAQALASWRGRIIAVGSRAD
                     AEPLIGPKTEVVDLDGATVLPGFIETHMHPIAAGVTMTAPQIGYPDCRNIDDVVAALA
                     ERAAITPSGEAIQAWGYDDSLMVDDRHLSRDDLNRASTDHPILIRHISGHLSYANDRT
                     LEMAGITDDVKDPVGGVFQREASGRPNGCMEETAGFAVAATFPQGTLSDMAAGARAIS
                     DYCLSVGTTTMTDAAVGSPDMYAAYQQGIEDGSIRVRTRVFPIWGTAGDLPFRTGIGD
                     ERLSIGAMKFISDGSIQGYTACLCKGYHDRPDVNGYEVIPAAELIELVTDAHAKGWQV
                     AVHANGDAAIDNTLDAIEAALDAHPRDDHRHRIEHCQTAREDQLERMARLGVLASVFA
                     NHIWYWGDRHRDRFLGPERGSRIDPLASFTAHGIVHALHCDMPVTPLDPLFTIWTAVN
                     RVTRDGELLGPDQRARVTDAVAGYTSAAAFVNMEEYDKGTLEVGKLADLVVLDADPFE
                     VDPMSIRDISVQATVVGGVVEYRA"
     gene            complement(4847..6085)
                     /locus_tag="QGG16_06360"
     CDS             complement(4847..6085)
                     /locus_tag="QGG16_06360"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012371.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HJP24931.1"
                     /translation="MAGSPVPEDKRVHHGNWTAWPNTRWSFTHMDELRASARIAAGGP
                     AGDLLPDAHTSSGQEGAENEADDEVGLVDLDELTMDDGDGDNWTLDEMLHQTCTNGFL
                     VLHRGRVVAERYFNGMDRSTRHIMFSMTKTVTGVLAMAAVESGAMAMDDLLTVHVPEL
                     ADTAYAPVTVQQALDMTDGIRFVEDYSDNKSDIMRYAVAMAFTPVPGNWDGPCGIHEA
                     IMGFTERDQLPGESFLYKSVTTDVLSWVTARATGRRWVDGVSEEIWKPMGAEGDASVV
                     LDGRGVAVTSGGMSCTLRDLARFGRMLARSGRVGEGVDERQAIPAAVANDIAAGGTPY
                     PGSGGGYPTREGWTFHRHCWNLQQPMGAFMPMGVHGQRVFCHPEKDLVVAKFSAHPVT
                     GNVYTDVSHESLYRAILDRC"
     gene            complement(6190..>6897)
                     /locus_tag="QGG16_06365"
     CDS             complement(6190..>6897)
                     /locus_tag="QGG16_06365"
                     /inference="COORDINATES: protein motif:HMM:NF019303.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HJP24932.1"
                     /translation="GIVVAVDATDVVIRAADPACGPLVLRQIRAADLLVVTKADLVPD
                     GGLGAVAWCTELAPDVPIVIADSPEGANPDGADRWVQSVLGSPALGASSVGSTDSTGE
                     DGNHGDGDSLAVGPALDLPVETAMWRASGPVDVDRLAASLASLVNQLGPALLRAKAVV
                     EALDGTTTAIHLAAGRVTIEPVMASVPESAAGVLVAITTPGVLTSLDLTAVLDAGLAT
                     RAEGADRSFQENRTTPC"
BASE COUNT         1197 a         2518 c         2094 g         1088 t
ORIGIN      
        1 gaacgctgcc aacgggtctc ccaacgggcc ttcctacgca atctggctcg cggcgaggcg
       61 taccagatcg aggcaccgtc gctttgggac gtcacccacc gcaccgcggt cgcccaggct
      121 gaactcgagg accgcgaacg tcccggcgcc taccaccggc tcgccttcca cctgccaacc
      181 ggcaccacca accacgacgg cagtggggac ctccacatcg ccaccacccg ccccgagctg
      241 ttggccgcct gcgtggccct ggtggcccac cccgacgacg agcgctacca gccgctgttc
      301 gacaccacag ccaccacgcc ggtgttcggc gtcgaggtgc cgatcatggc ccatgagctg
      361 gccgaccccg acaagggcac cggcatcgcc atgatctgta cgttcggcga caccaccgac
      421 gtcacctggt ggcgcgagct cgaccttgac gtccgggcca tcatcaaccg tgccggccgg
      481 gtgaaccccg aaccgccgcc gggcatcgag accgacgccg gactggccgc ctacgcccgc
      541 ctggccggca agacggtctt ctccgctcag gccgagatgg tcgaactcct ccgtgaggcc
      601 ggcgatctga tcggcgagcc cgaacccatc acccacccgg tcaagttctt cgagaagggc
      661 gacaagccgc tcgagatcgt caccagccgc cagtggtaca tccgcaacgg cggccgcgac
      721 gtcgacctgc gggccgagct cgtggcccgg ggcgaccaga tgcagtggca ccccgcctac
      781 atgcagaccc gctacacaaa ctggatcgac ggcctgaacg gcgactggct ggtcagccgc
      841 caacgcttct tcggcgtgcc cctgccgctc tggtaccaac tggacgccga cggcgagccc
      901 gtccacgaca cccccatcac ccctgacgaa gccgacctcc ccattgatcc ctcatcggac
      961 gccgcccccg gctacgacga atcccagcgc ggccaaccca atggcttcat cggcgacagc
     1021 gacgtgatgg acacatgggc cacctcatcg ctgacccccc agatcgcctg cggctgggaa
     1081 gaggacgacg acctctacgc ccgcacctac cccatggacc tccgccccca ggcccatgac
     1141 ataatccgga cgtggctgtt ctcgacggcc gtgcgatccc acttcgaggc cgacaccgcc
     1201 ccgtggggcc actgcgcctt gtcgggatgg attctcgacc cggaccgcaa gaagatgtcc
     1261 aagtccaagg gaaacgtcgt gaccccggtt gacctgctcg accagcacgg gtcggacgcc
     1321 gttcgctact gggccgccaa gggccgaccc ggtaccgaca cggccttcga cgacgaccag
     1381 atgaagatcg gtcgacggct ggccatcaag gtgctcaacg ccagccggtt cgcgctgggc
     1441 ttcggtgccg atggcgacac gccgctggcc atcgacccgg cagccatcac ccatcccctc
     1501 gaccgggcca tgctcctgcg actggccgac ttggtcgacg aggccacccg agccttcgac
     1561 gggttcgact acgcccgggc actcgagcgc accgaaacgt ggttctggac attcaccgac
     1621 gaccacgtcg agttggtcaa gaaccgggcc tacgagggcg acgaagcagg cgctgaatcg
     1681 gcccgccatg ccctacgtct cgccctgtcg acactgcttc gcctgttcgc cccgttcctc
     1741 cccttcgtga ccgaggaggt ctggtcgtgg tggcagggcg gttccatcca ccgccagtct
     1801 tggccgtcgg ccgatgaact gcgggccgcc gccgagggca ccggcgacgg tgccgacaac
     1861 aatcccgtgg acccagcgat tgccgaagtg gccgctgccg cgttggtcga gatccgccgc
     1921 cacaagacga ccgagaaacg ctcgctggcc accccggtca tcgcctgcac gctgaccgac
     1981 acaccggaac gactcgcctt gctgcgtccc gcccttggag acgtcgccgc ggccgcccgg
     2041 gccaccgaca tccacctgtc tgaaggcgac accctgtcgg tccacgtcga gctggcgcca
     2101 accgagcaca gaccggaagc cgccgaaccc tcagccgact agggcaacat ccggatcctc
     2161 aggcaggatc ggtccatggc cgacaccact tccccacccg acttccgcac catcgccgtc
     2221 acctgcgacg gccgacgggg caccctcacg ttgaaccggc ccgaccggct caacgcgctc
     2281 tccaacgaac tgatggccga agtggccgac gccgcggcgt ggttcgacca ccagtccgac
     2341 ctgcgggtag tggtggtgcg cggcgagggt cgagcgttca gcgcgggatt cgacctcacg
     2401 gtgttcggcg acgacggacc gtcgccggcc ggaggacgag tcccatccga caccgggcgc
     2461 ctcatggccg acgccctgga gcgaacctca ccggtactta tcgccgccat gcacggccac
     2521 gtggtgggcg ggggtctcgt catcggcgcg gcatgcgatc tgcgtatcgc cacagccgac
     2581 gtgtcgttct ccatccccga ggtcgacctg ggcatcccgt tggcctgggg cggcattccc
     2641 cgcctggtac gcgagatcgg cccggccctc accaaggaac tggttatgac atgccgtccc
     2701 ttcagcgccg cagaagccat ggccgctggg ttcctgaacc gggtcgtgcc cgccgacgaa
     2761 ctcgacgcgg cagtcgaaga acttgccgag gctgtggcca gtcgaccccg cggcgccgtg
     2821 ttggctacca agcggcacgt caacgcggtc accgaccaaa tggtgggcac cggccgttcg
     2881 tggtccgatg ccgacggtct taccgccgca ctacgcgacc ctgagggccg cgcgtcacgc
     2941 gagtcctaca tggagcgcct ccaggctaag aagcagaagt aggtatcaac catgcccatc
     3001 gccgaccgcc tgttcattaa cgccaccttc cacaccctcg attcgacatc gcctgatgga
     3061 tcgcctgccc aggcactggc ctcttggcgg ggtcgcatca tcgccgtagg cagccgtgcc
     3121 gacgccgaac cgctaatagg accgaaaacc gaggtagtcg acctcgacgg agccactgtg
     3181 ctgcccgggt tcatcgagac gcacatgcac cccattgccg ccggggtgac gatgaccgct
     3241 cctcagatcg gctatccgga ctgccggaac attgatgacg tggtggccgc cctcgccgaa
     3301 cgggccgcaa tcactccgtc cggtgaggcc atccaggcct ggggatacga cgactcgctc
     3361 atggtcgacg accgacacct ctcgcgtgac gacctgaacc gggccagcac cgaccacccc
     3421 atcctcatca ggcacatctc gggacacctc tcgtacgcca acgaccgcac cctcgagatg
     3481 gccggcatca ccgacgacgt caaggatccg gtgggcggcg tcttccagcg ggaggcatca
     3541 ggtcggccca acggctgcat ggaggaaacg gccggattcg ccgtcgcggc gaccttcccc
     3601 cagggcacct tgtccgacat ggccgccggt gcccgagcca tctccgacta ctgcctgtcg
     3661 gtcgggacca caaccatgac cgatgctgcg gtcggatccc cggacatgta tgccgcctac
     3721 cagcagggca tcgaggacgg ctcgatccga gtcagaaccc gggtgtttcc catctggggg
     3781 accgccggcg acctaccgtt ccgcaccggc atcggcgatg agcggctgtc cattggcgcc
     3841 atgaagttca tctccgacgg ttcgattcag gggtacaccg cgtgcctctg caagggatac
     3901 cacgaccggc ccgacgtgaa cggctacgag gtcatcccgg ccgccgagct catcgaactg
     3961 gtcaccgacg cccatgccaa gggttggcag gtagccgtcc acgccaatgg cgacgcggcg
     4021 atcgacaaca cattggatgc catcgaggcg gcactcgacg cccatccccg agacgaccac
     4081 cgccaccgga tcgagcactg ccagacggct cgcgaagacc aactggaacg catggcccgt
     4141 ctcggagtac tggcttccgt gttcgccaac cacatctggt actggggtga ccgtcatcgt
     4201 gaccggttcc ttggtccgga gcgggggtcc cgcatcgatc cgctggccag cttcacagcc
     4261 cacggcatcg tgcacgccct gcactgtgac atgccggtca caccgctcga cccgctattc
     4321 accatctgga cggccgtgaa ccgggtcact cgagatggcg agttgctcgg ccccgatcaa
     4381 cgggcccggg tcaccgatgc ggtggccggg tacacgtcgg ccgcggcctt cgtgaacatg
     4441 gaggagtacg acaaggggac cctcgaggtg ggaaagttgg ccgacctggt ggtgctagac
     4501 gccgacccgt tcgaggtcga tccgatgtcc atcagggaca tctcggtgca ggccaccgtg
     4561 gtcggtggcg tggttgagta ccgggcctga cgagaagccc ctcactccta gaagccctgt
     4621 cacactccgc cgtcgtgatg ggtccatgga tgcgacggcc accctctcca cctccggccc
     4681 caccgcggtt caaccgctcg ggcgtttatc cgttccgcac gtacacgcct cgccgatttc
     4741 gccgccgaca acctgacggc cgatgacctc gtactgcact gttctacccg ccacctggtc
     4801 cacgaaaggt ggcccacgag gacgaactgc tagccagtcg ggctccctag caacggtcga
     4861 ggatggcccg gtagagcgac tcatgggaga cgtcggtgta gacgttgccg gtcaccgggt
     4921 gggcactgaa cttggccacc accaggtcct tctcggggtg gcaaaacact cgctgtccgt
     4981 ggacacccat aggcatgaac gcgcccatgg gctgctggag gttccaacag tgccgatgga
     5041 aggtccaacc ctcgcgggtt gggtatccgc ctccgctccc cggatacggc gtgccgccgg
     5101 ccgctatgtc gttggccacc gccgccggga tcgcctggcg ctcgtcgacg ccctctccca
     5161 cccggcccga ccgggcaagc atccggccga accgcgctag atcgcgcaga gtgcacgaca
     5221 tgccgcccga cgtgacggcg accccacggc catcgaggac caccgaggca tccccctcgg
     5281 cccccatcgg cttccagatc tcctcggata cgccgtccac ccaccgtcga ccggtggctc
     5341 gggctgttac ccacgacagc acgtcggtgg tcaccgactt gtagaggaac gattcccctg
     5401 gcagttggtc ccgctcggtg aaccccatga tcgcctcgtg gatcccgcac ggaccgtccc
     5461 agttgccagg caccggcgtg aatgccatgg ccaccgcgta ccgcatgatg tccgacttgt
     5521 tgtcgctgta gtcctcgacg aaccggatcc cgtcggtcat gtccaacgcc tgttgcacgg
     5581 tcaccggcgc gtaggccgtg tcggccaact cgggcacgtg cacggtcagc aagtcgtcca
     5641 ttgccatggc acccgactcg acggccgcca tagccagcac tccggtcacc gtcttggtca
     5701 tcgaaaacat gatgtggcgg gtcgaacgat ccataccgtt gaagtaccgc tcggccacca
     5761 ctcggccccg gtgcagcacc aagaacccgt tggtgcacgt ttggtggagc atctcgtcga
     5821 gcgtccagtt gtcgccgtcg ccgtcatcca tggtcaactc atcgaggtcg acaaggccta
     5881 cttcatcgtc agcttcgttc tcagcgcctt cctgaccact ggaggtgtgt gcatccggca
     5941 gcaggtctcc ggccgggcca ccggcagcga tccgggccga tgcccgtagc tcgtccatgt
     6001 gggtgaacga ccagcgggtg ttgggccacg ccgtccagtt cccgtgatgg actcgcttgt
     6061 cctcgggcac tggcgaaccg gccatcagtc cggcctcgga agctgtcacc ggttcgggca
     6121 ggacatccaa cgcggtcggt tgtggccgtc cggtctcggg acatatcaat gtcacaacga
     6181 gttgcggagt cagcatggtg tggtcctgtt ctcctggaag gatcgatcgg ctccttcagc
     6241 tctggtggcc agcccggcat cgagcaccgc tgtgagatcg agggaggtga gcactccggg
     6301 ggtggtgatg gccaccagca cacccgccgc tgattctggc accgacgcca taaccggttc
     6361 gatcgtcacc ctgcctgccg ccagatggat ggctgtcgtg gtcccgtcca gggcctcgac
     6421 caccgccttg gcccgcagca gtgccgggcc caactgattg accagggaag ccagcgaagc
     6481 agccagacgg tcaacgtcca ccgggccgga tgcccgccac atggcggtct ccaccggcag
     6541 gtccaacgcc ggaccgaccg ccaaagaatc gccatcccca tggttgccgt cctccccggt
     6601 gctatcggtg ctcccgacgg acgatgcgcc tagggctggg cttcccaaga ccgattggac
     6661 ccagcggtcc gcgccgtccg ggttcgcccc ttccggcgaa tcggcgatca cgatgggcac
     6721 gtccggtgcg agttcggtgc accaggccac ggcgccgagc cccccgtcgg ggaccaggtc
     6781 ggccttcgtc accacgagca ggtcggctgc ccgaatctgg cgtagcacca gcgggccaca
     6841 tgccggatca gcggctcgga tcaccacatc ggtggcgtcc acagctacca cgatccc
//
LOCUS       DASCMR010000270         2252 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001331046, whole genome shotgun sequence.
ACCESSION   DASCMR010000270 DASCMR010000000
VERSION     DASCMR010000270.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2252)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2252)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2252
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001331046"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..668
                     /locus_tag="QGG16_06370"
     CDS             <1..668
                     /locus_tag="QGG16_06370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24933.1"
                     /translation="VVLHASARALLARYLPGGIWYAAGRAALLRHHGISAPASATAGG
                     LELALGAPVAVVVGTVLLAAAGEAPAWMAVVAVLALVAVVGLGGATIGRLVTHRVRRR
                     GGEAAAVPGIPTLARLTAVLVGYWLAIGTLFWAYLEVVGSTTIAWLDTVGAFGVSWGA
                     GFIALFAPQGLGVFEGTLVAVMDWGAEAVLLVAGFRAVLLVRDLLVTVVAEVVARRGR
                     SGS"
     gene            complement(665..1795)
                     /locus_tag="QGG16_06375"
     CDS             complement(665..1795)
                     /locus_tag="QGG16_06375"
                     /inference="COORDINATES: protein motif:HMM:NF014411.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase"
                     /protein_id="HJP24934.1"
                     /translation="MERETTPHGAPADGPLVHVVWGTKAEAIKVAPVLRELENRGLPY
                     RLVETGQHGAYLPGLRRRLGVREPDVRLGGDRDADSLPAAVRWALRMAGLLVSGGGLR
                     NRVFGDRGGVCLVHGDTPSTLLATLMARRAGLPVVHLESGLRSGSFGHPFPEEAIRVL
                     VMRRAAVCLAPDARSAANLAAMGLSERTVETSGNTGLEALRDALGDVEPGSGPVVATM
                     HRVENLHRADRFDGFLNLLGRAGSDVTFAVHPPTDGVLARRGGRAAVEATGVVITDLV
                     PYDEFVTMLAAAPFVITDGGSIQEECARLGVPTLLWRDRTERHDGVGDNVLVSRYDPA
                     EVDAFLADPQKWRRPARTGDERPAAEVVDVLVRMLDEMPEGS"
     gene            1899..>2252
                     /locus_tag="QGG16_06380"
     CDS             1899..>2252
                     /locus_tag="QGG16_06380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24935.1"
                     /translation="MTTPTEPSTDGLFPIGRPTPLGVYLRDLWARRDYIVQVPLNDLR
                     SQNAHTLLGGAWLVLNPLLQVGVYFLVFGVIMPIDRGVDSYLVFLTLGVFAFHYSQRI
                     ISDGARSMVSSMGLIR"
BASE COUNT          296 a          828 c          780 g          348 t
ORIGIN      
        1 gcgtggtgct ccacgcctcg gcgcgggcgc tgctggcccg ctacctcccc ggcgggatct
       61 ggtacgcggc gggacgggcc gcactgctgc ggcaccacgg gatcagcgca ccggcgtcgg
      121 ccacggccgg cgggctggaa ctggctctcg gtgcaccggt cgccgtggtc gtcggaacgg
      181 tcctgctggc cgccgccggc gaggccccgg cgtggatggc ggtggtcgcc gtgctggccc
      241 tggtggccgt cgtgggcctc ggcggggcca ccatcggccg cctcgtgacc caccgggttc
      301 gccgacgcgg cggcgaggcg gcggcagtcc ctgggatccc cacgctggca cgcctgaccg
      361 ccgtgctggt cggctactgg ctggccatcg gcaccctgtt ctgggcctac ctcgaagtcg
      421 tcggctcgac gacgattgcc tggctcgaca cggtgggggc cttcggcgtg tcgtggggcg
      481 ccgggttcat cgccctgttc gccccccagg gactcggggt gttcgagggg acgctggtcg
      541 ccgtcatgga ctggggtgcc gaagccgtgc tgctggtggc cgggttccgg gccgtcctgc
      601 tggtccggga tctgctggtc accgtggtgg ccgaggtggt ggcacgccgt ggccgatccg
      661 ggagctagct cccctccggc atctcgtcga gcatccggac cagcacgtcg accacctcgg
      721 cggccggccg ttcgtcaccc gtcctggcag gtcgacgcca cttctgcgga tcggccagga
      781 aggcgtccac ctcggccggg tcgtaccggc tgaccagcac gttgtccccc acgccgtcgt
      841 gccgctcggt gcggtcccgc cacagcaggg tgggtacgcc caggcgggcg cactcctcct
      901 ggatggaccc tccgtcggtg atgacgaacg gggcggcggc cagcatggtc acgaactcgt
      961 cgtagggcac caggtcggtg atgaccacac cggtggcctc tacggcggca cgaccgcccc
     1021 gccgggccag gacgccatcg gtgggcgggt gcacggcgaa ggtcacgtcc gacccggccc
     1081 gacccaacag gttcaagaag ccgtcgaacc ggtcggcgcg gtgcaggttc tcgacccggt
     1141 gcatggtggc caccaccgga cccgacccgg gttccacgtc gcctagagcg tcgcgcagag
     1201 cctccaggcc cgtgttgcct gacgtctcca ccgtgcgctc cgagaggccc atcgccgcaa
     1261 ggttggctgc cgaacgggca tcgggggcca ggcacacggc ggcccgacgc atgaccagca
     1321 cccggatggc ctcctctggg aacggatgcc cgaagctgcc cgaccgcagc ccggactcca
     1381 ggtggaccac cggcaggccg gcacgcctgg ccatgagggt ggccagcagg gttgacgggg
     1441 tgtcgccgtg caccaggcag acgccaccac ggtccccgaa cacccggttt cgcaggccac
     1501 cgccggagac cagcagacct gccattcgca gagcccaccg gacggcggcc ggcaacgaat
     1561 cggcgtcccg gtcgcctccc aggcggacgt cgggttctcg cacgccgagg cgacggcgca
     1621 gaccggggag gtaggccccg tgctggccgg tctcgaccag ccggtagggc aacccccggt
     1681 tctccagttc gcgcagcacc ggtgccacct tgatggcctc ggccttggtt ccccacacca
     1741 cgtggaccag cggcccgtcg gccggtgctc cgtgaggggt ggtttcgcgt tccatcgaca
     1801 cagatggtgc tacacggagg ccaccgaagg tgaaccactc ccggtcgggc ccccgcctac
     1861 cctgtcaccg gtcccgatcg acgggacgtc ctccatcgat gaccaccccc accgaaccct
     1921 ccaccgacgg gctcttcccg atcggtcgac ccacaccact gggcgtctac ctgcgtgacc
     1981 tgtgggcccg ccgggactac atcgtccagg tgccgctcaa cgacctgcgt tctcagaacg
     2041 cccacacctt gctgggcggc gcatggctgg tgctcaaccc cctgctccag gtaggcgtct
     2101 acttcctggt gttcggcgtg atcatgccca ttgaccgggg ggtggacagc tatctggtct
     2161 tcctgaccct cggcgtgttc gccttccact actcccagcg gatcatcagc gacggcgccc
     2221 ggtcaatggt gtcgtccatg ggcctcatcc gg
//
LOCUS       DASCMR010000271         4643 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001336764, whole genome shotgun sequence.
ACCESSION   DASCMR010000271 DASCMR010000000
VERSION     DASCMR010000271.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4643)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4643)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4643
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001336764"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..469
                     /locus_tag="QGG16_06385"
     CDS             <1..469
                     /locus_tag="QGG16_06385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HJP24936.1"
                     /translation="NLFPHLTVLENITLAQRKVRGRSKSEASEMGMRQLTRVGIPDKA
                     DAFPRQLSGGQQQRVAIARALAMEPRVMLFDEPTSALDPEMVKEVLDVMLELASEGMT
                     MVVVTHEMGFAKAAADRLVFIDEGEIVEVGAPEEVFSNPSQDRTRAFFDKILY"
     gene            508..2055
                     /locus_tag="QGG16_06390"
     CDS             508..2055
                     /locus_tag="QGG16_06390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJP24937.1"
                     /translation="MTVGSSPTPAVELAGITKRFPGVVANDRVDLRVAEGEIHAVVGE
                     NGAGKSTLMKILYGMQTADEGQMLVGGVEVQFSSPSEAIDAGIGMVHQHFMLADQLTV
                     LENVVLGAEPTRRGVIDYHSARRHLDELGSSYGLDLHPNDFVESLEVGERQRVEIIKV
                     LYRGAKVLILDEPTSVLVPQEVEKLFDNLRELKARGHTIIFIDHKLEEVLAIADTITV
                     LRRGRTVATTTPDQVTAAELAELMVGSELPKPSTEPRVADQHVTLSLRSATVPGDDGR
                     PALEAVNLEIHRGEVLGVAGVEGNGQGELIEAILGLRPFTGGELLLDGEPITNWPVRH
                     RRDAGLGYVPEDRQRRGLLLDAPLWENVVLGHQTQRPYARGPWLDRSSARAAAGTILS
                     DFDVRAPGVDTTARALSGGNQQKLIIGREMASRPRMLIAAHPTRGIDVGAQAAVWDEL
                     REARREGMAVLLVSADLEELIGLADRLVVMLRGRIAAELDPTNTSPRLLGSHMTGAAV
                     DDQGGVQ"
     gene            2052..3179
                     /locus_tag="QGG16_06395"
     CDS             2052..3179
                     /locus_tag="QGG16_06395"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP24938.1"
                     /translation="MSVRRFVLALAAPACAFTFSIGVSSLVLMAFGTNPIDAWAEMLS
                     YGTRLETFVETGNRATPLYLAGIAVAIGFRMNLFNIGVEGQYVLAALLAASAGAAVDL
                     PPVLHVALIMAVAMAVGSAFAGVAGYLKVSRGVHEVISTIMLNAVALAAVGFLLRNWL
                     LDESDTTLNMMTPEIPASGQFPHLNSLVETFTREISRGRELWGFLLVAVFVGVLFHVF
                     LNRTRAGFDLRATGLNPFAAEASGADPSTNIVRAMLLSGAVAGLIGLPEVLGDAHKYD
                     LGFARGLGFTGIAVALVGRNHPGGIAIAALLFGWLDSSAPILDVVGDAPREIVSILQG
                     VVVLSAVVAYEVVNRIRRVSEARDAAVAVRLPVKTSNGDTA"
     gene            3179..4429
                     /locus_tag="QGG16_06400"
     CDS             3179..4429
                     /locus_tag="QGG16_06400"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP24939.1"
                     /translation="MELLRSSTVLRWMLAALGVVVVLSVLQELARPATIDLVSVGTAE
                     STLRRAVPILLAGLGGIWAERAGVVNIGLEGMMVLGTWFGAWGALEFGPWWGIAIGVA
                     GGAAGGLLHAVATVGFGVDHIVSGVAVNIVAPALARFLSGEVFSGRSGGGITQSPRVE
                     SVGHFDLPFLSGGEFLGWKTPDLLGWTVDQDWLLVSDLAAVLSGITSSLSWATLLALT
                     LVPVSVFVLWRTPFGLQIRASGEHPVAADSLGVSVYKMKFTAVVVSGALAGFGGAFIA
                     IEQTGVYREGQVQGRGFIGLATVIFGNWQPVGAFLGSLLFGFADALQLRDRTAVHALL
                     LLAGVALAGLALRALLKHRHGSAVLLASSSAAVLWWYAVTDEVAGELPPITPHVVTLL
                     VLVFATSRLRMPAANGLRYRRGQE"
     gene            4429..>4643
                     /locus_tag="QGG16_06405"
     CDS             4429..>4643
                     /locus_tag="QGG16_06405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24940.1"
                     /translation="MDRVLDPDQRASWDRDGFVVLPDFVDTELQADLRDRIAEIVADY
                     SASGLPDGAVSVFSTTEQTHAQDDWFLT"
BASE COUNT          830 a         1435 c         1428 g          950 t
ORIGIN      
        1 caacctgttc ccccatctga cagtgctcga aaacatcacc ctggcccagc ggaaggtccg
       61 gggtcgttcc aagtccgagg ccagcgaaat gggcatgcgc caactcacca gggtgggcat
      121 tcccgacaaa gccgacgcct tccctcgcca actctccgga ggccagcagc agcgggtggc
      181 gatcgcccga gcgctcgcca tggaaccccg cgtgatgctc ttcgacgaac ccacctcggc
      241 actcgacccc gagatggtca aggaggttct agacgtcatg ttggagttgg ccagcgaggg
      301 catgaccatg gtggtggtca cccatgagat gggcttcgct aaggctgccg ctgatcgtct
      361 ggtgttcatt gacgagggcg agatcgtgga ggttggcgcc cccgaggagg tcttctccaa
      421 cccaagccag gaccgcaccc gggccttctt cgacaagatc ctctactgac cgtgtcgcca
      481 tcatccactg accgtgggac tggaccggtg acggtcggat cgtcgcctac tccagctgta
      541 gagctcgccg ggatcaccaa gcggtttccg ggtgtcgtgg ccaacgaccg ggtcgacctt
      601 cgagtcgccg agggcgagat ccacgcggta gttggcgaaa acggggccgg caagtcgacg
      661 ctcatgaaga tcctctacgg aatgcagacg gccgatgagg ggcagatgct ggtcggtggc
      721 gtcgaagtgc agttctcctc accatcggag gccattgacg caggcatcgg gatggtccac
      781 caacacttca tgctggccga ccagctcacg gtgctggaga acgtcgttct gggggccgaa
      841 ccgacccgcc ggggagtgat cgactaccac tcggctcgcc gccatctcga cgagttgggc
      901 agttcctatg gactcgacct acaccccaat gactttgtgg aatccctaga ggttggcgaa
      961 cgccagcgtg tggagatcat caaggtcctc tacagggggg cgaaggtcct aatcctcgat
     1021 gaaccgacgt cagtgctcgt cccccaagaa gtggaaaaac tgttcgacaa cctacgagag
     1081 ctcaaggctc ggggccacac catcatcttc atcgaccaca agctcgagga ggtcttggcc
     1141 atcgctgaca ccatcaccgt ccttcgccgg ggtcgcaccg tcgccactac gacacctgac
     1201 caggtcacgg ctgccgagtt ggcggaactg atggttggtt ccgaactacc gaagccgtcc
     1261 actgaaccgc gggtagccga tcaacacgtg acgctgtcac ttcgttcggc aactgttccg
     1321 ggagatgacg gccgacccgc cctagaagcc gtcaatctcg aaatacaccg cggtgaggtc
     1381 ctgggagtgg ccggcgtgga aggcaatggt caaggggagc tcatcgaggc gattcttgga
     1441 ctccgcccct tcactggggg cgaactgctc ctagatgggg aacccatcac caactggccg
     1501 gtccgtcatc gacgcgacgc cggtctcggt tacgtgccag aggaccggca acggcgcgga
     1561 ctgctgctcg acgctccctt atgggaaaac gtcgtgctcg gccaccaaac ccagcggccc
     1621 tatgcgcggg gcccatggct ggatcgttcc agcgctcggg ctgctgcggg aacgatcctc
     1681 tcggattttg acgtcagggc gccgggcgtg gacaccacgg cccgtgcgtt atcgggtgga
     1741 aaccagcaga agttgatcat cgggcgggaa atggcttctc gaccacgaat gcttattgcc
     1801 gcccacccca cacgcggtat tgatgtgggc gctcaagctg cggtatggga tgagttgcga
     1861 gaagcgcgtc gcgaaggaat ggccgtccta ctggtgtcag ccgacctgga ggaactgatc
     1921 ggactagccg atcgcctagt ggtcatgctc cgcgggcgga ttgctgccga attggacccg
     1981 accaatactt cgccacgcct gttgggaagc cacatgactg gggcggcagt ggatgaccaa
     2041 ggtggtgtcc aatgagcgtt cggcgcttcg tactcgcctt ggccgcgccc gcatgcgcat
     2101 tcaccttctc tataggggtg tcttcactgg tcctgatggc ctttggaacc aatccaattg
     2161 acgcatgggc cgagatgctg tcgtatggca cccgcctaga gaccttcgtt gagacaggca
     2221 accgcgcgac tcccctgtat ctggctggca ttgcggtggc aatcggcttc cgcatgaacc
     2281 tcttcaatat cggggtagaa ggccagtacg tactcgccgc gctgctagcc gcatcagcgg
     2341 gtgccgcggt cgatctgccc ccggttctac atgttgccct catcatggct gtcgccatgg
     2401 cggtcggctc agcgttcgct ggggtcgcgg gctacctgaa ggtcagcaga ggcgtccatg
     2461 aggtgatctc caccatcatg ctgaacgccg tggcactagc cgccgtgggc ttccttctgc
     2521 gcaactggct ccttgacgag agtgacacca ctctcaacat gatgacgccg gaaataccgg
     2581 catcaggcca gttccctcac ctcaactctc ttgtcgagac gttcacgcga gaaattagtc
     2641 gaggtcgaga actctggggc ttcctactgg tagcggtatt cgtgggtgtg ctctttcacg
     2701 tcttcctcaa ccgcacgcga gccggtttcg accttcgagc cactggcctc aacccgttcg
     2761 ctgctgaagc gtcgggggca gatccgtcaa ccaacatcgt ccgagccatg ttgctgtcgg
     2821 gggccgtcgc tggcctgatc ggccttcccg aagttttggg cgacgcccac aaatatgacc
     2881 ttggattcgc ccgcggtctt ggattcacag gaatcgccgt ggcccttgtc ggacggaacc
     2941 atcccggagg aatcgcgatt gcagccctgt tgttcggctg gctcgatagt tcagccccga
     3001 tcctggatgt tgttggggac gctccccgcg agattgtttc gatcctccag ggggttgtgg
     3061 tgttgtcggc cgtagtggcc tacgaggtag tgaaccggat tcgccgtgta tctgaagccc
     3121 gagatgctgc agtagccgtc cgactgccgg tcaaaacctc caacggggat accgcgtaat
     3181 ggaactccta cggtcctcga cggtgcttcg ttggatgctt gccgcgctcg gggtggtagt
     3241 cgtcctatcc gtcttgcagg aactggcccg accagcgaca atcgacctcg tctctgttgg
     3301 caccgccgag tcaactctcc gtcgggccgt accaatcttg ttggccgggc ttggtggcat
     3361 ttgggctgag agagccggcg tcgtcaacat cggactcgag ggaatgatgg ttctcggcac
     3421 atggttcggt gcctggggcg cactcgagtt cggcccttgg tggggaatag cgatcggtgt
     3481 tgctggtggc gcggccggcg gcctactcca tgctgtagcc actgtgggat tcggcgtaga
     3541 ccacattgtc tcaggggtgg ccgtcaacat cgtcgcacca gcgctggcac gattcctgtc
     3601 cggcgaggtg ttctccggac gatcgggtgg aggcataacg cagtcgcccc gggtcgagtc
     3661 cgtcggccat ttcgatcttc cattcctgtc aggtggcgaa ttccttgggt ggaaaacccc
     3721 cgacctgctc ggatggaccg tggatcaaga ttggttgctc gtctccgact tggccgctgt
     3781 cctatcgggc attaccagca gcctctcgtg ggcgactctc ctggcactga ccctggttcc
     3841 cgtttcagta ttcgtgctgt ggcgaacacc cttcggcctc cagatccgag cctcagggga
     3901 acatcccgtg gccgccgaca gtctcggcgt gtccgtatac aagatgaagt tcaccgcggt
     3961 agtggtcagc ggcgcattgg ccggcttcgg tggagcattc attgccatag aacagacggg
     4021 cgtctaccgg gaaggacagg tccagggcag gggtttcatc ggcctagcta cggtgatctt
     4081 tggcaactgg caacccgtgg gcgccttcct cggatcgcta ctcttcggct tcgccgatgc
     4141 gttgcaactt agagaccgca cggcagtgca tgccctgctg ctgctcgccg gcgtagccct
     4201 cgcgggactg gccctacgag ccctactgaa gcacagacac ggttctgcgg tgttgctggc
     4261 gagctcatcg gcagccgtgc tttggtggta cgcggtaacc gatgaagtag ccggtgagct
     4321 accacccatc acgccccatg tggtcaccct gcttgtcctg gtgttcgcta ccagcaggct
     4381 ccggatgcct gcggcaaacg gcctccgcta ccgacgtggg caggaatagt ggaccgtgtc
     4441 cttgaccccg accagcgggc ttcctgggac cgcgacgggt ttgtggtgct ccccgacttc
     4501 gtggacaccg aactccaagc cgacctccgg gaccgtattg ctgaaatcgt ggccgactac
     4561 tccgcttctg gccttccaga cggcgcagtc tccgtattct caaccactga acagacccac
     4621 gctcaagacg actggtttct cac
//
LOCUS       DASCMR010000272         4046 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001338344, whole genome shotgun sequence.
ACCESSION   DASCMR010000272 DASCMR010000000
VERSION     DASCMR010000272.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4046)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4046)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4046
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001338344"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..965)
                     /locus_tag="QGG16_06410"
     CDS             complement(<1..965)
                     /locus_tag="QGG16_06410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-3-phosphate synthase"
                     /protein_id="HJP24941.1"
                     /translation="MSNPLDIAPATGRLGVLTPGMGAVASTFIAGVIAARQGLTAPIG
                     SVSQMAHIRLGNRDADRNPLIREFVPLAELDDLVFGGWDPISPNVLEAARTCGVLEDK
                     DLAPVSAELEGIVTMDAVFDQRWVKKLEGTRVKAESNKWDQAQALIADIERFRIENEC
                     DRLVMVWCGSTEAYQEASAVHDNVEAFEAGLRDDDENISPSQIYVYAALMSDVPFANG
                     APNLSVDLPCMIELAAHRGVPIAGKDFKTGQTLMKTLLAPGFKARMLGLRGWYSTNIL
                     GNRDGEVLDDPENFKTKEVSKLGVLDTILQPESYPDLYGNIDHVVR"
     gene            1045..1920
                     /locus_tag="QGG16_06415"
     CDS             1045..1920
                     /locus_tag="QGG16_06415"
                     /inference="COORDINATES: protein motif:HMM:NF015431.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HJP24942.1"
                     /translation="MDDPILPNLTVQQLEYLVAAAASPTRAAAAAALSVTPSALTQGL
                     AELERRVGVPLFERHGRHTRLRPQATEVLAHARRVVAETRDLARWAETRRTGAAGVVR
                     LGTIDAVAVHYRAEAIRRHRRAVPGLDLRLTVAPSGALFDALLVGDLDLVVCVEPTGP
                     IAGVAMSPCLDESLYAYAPDGARAGPPEEWGPWVTYPRGSHTREVIAAGLAALGAPFA
                     VVAESNQPEVLREMVRLGMGWAVLPAAQAEAGVEPLARVRRRPVGVRHLVVARRADVA
                     SDAAVDALAAVLTSG"
     gene            2099..3340
                     /gene="glyA"
                     /locus_tag="QGG16_06420"
     CDS             2099..3340
                     /gene="glyA"
                     /locus_tag="QGG16_06420"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HJP24943.1"
                     /translation="MAWPVSRDDELFGYIDQEVERQNTTLQLIASENFASPAVLEASG
                     SVLTNKYAEGYPGKRYYGGNVHVDEVEDLARERVKALFGADHANVQPHSGANANMSVY
                     QALLDPGDTVLGLSLDHGGHLTHGSPVNASGKLYDFVSYGLTGSDERIDMDQLRDQAR
                     AARPKMIVAGATAYPRIIEPAPLREIADEVGALLMFDAAHIAGLIAGGVHPNPVPYCD
                     IVTFTTHKTLRGPRGGCILSREEYAAAIDKSVFPGSQGGPLEHHIAAKAVAFREAADP
                     SFAGYARQIVANASSLAAALVGHGFRLVTGGTDNHLMVVDLRTFDAEVTGAVAQNTLD
                     RAGIVLNKNTVPDDPRSPFVTSGVRIGTPSTTTQGMVEAEMAEIADLMVRALRGRDDE
                     AEIAAVRADVNALCARFPVYV"
     gene            3434..>4046
                     /locus_tag="QGG16_06425"
     CDS             3434..>4046
                     /locus_tag="QGG16_06425"
                     /inference="COORDINATES: protein motif:HMM:NF013146.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl/decaprenyl-phosphate
                     alpha-N-acetylglucosaminyl 1-phosphate transferase"
                     /protein_id="HJP24944.1"
                     /translation="MPGIVPHLIVGAVAALATAAATPVVRRFAVGSGLVVAPDERSVH
                     TAPTPSLGGPSMLGGLLAGVLTAWIVGDFSEVFAAPTEMLGVVSAAVVICVVGVIDDV
                     RPVSPPAKVAGMVLAGSVLSLTGVSLVVLRIPFLDVVLLSPDLSALLTVVWVVLLVNA
                     LNLIDGLDGLAAGIVAIAAATFFLYALRLGDEGLLFEGNPGSML"
BASE COUNT          608 a         1332 c         1388 g          718 t
ORIGIN      
        1 cgtacgacgt ggtcgatgtt gccgtagagg tcggggtagg actcgggctg gaggatggtg
       61 tccagcacgc ccagcttcga gacctccttg gtcttgaagt tctctgggtc gtcgaggacc
      121 tcgccgtccc ggttgcccag gatgttggtg gagtaccagc cgcgcaggcc gagcatgcgg
      181 gccttgaagc cgggggccag cagcgtcttc atgagcgtct ggccggtctt gaagtccttg
      241 ccggcgatcg gcacgccacg gtgggcggcc agctcgatca tgcagggcag gtcgacgctc
      301 aggttggggg caccgttggc gaacggtacg tcgctcatga gcgccgcgta cacgtagatc
      361 tggctggggg agatgttctc gtcgtcgtcg cgcaggccgg cctcgaaggc ctcgacgttg
      421 tcgtggaccg cgctggcctc ctggtaggcc tcggtcgaac cacaccagac catgaccagg
      481 cggtcgcact cgttctcgat ccggaaccgc tcgatgtcgg cgatgagggc ctgggcctgg
      541 tcccacttgt tggactcggc tttgacgcgg gtgccttcga gcttcttgac ccagcgctgg
      601 tcgaacacgg cgtccatggt gacgatgccc tccagctcag ctgagacggg tgcgaggtcc
      661 ttgtcctcca gcacgccaca ggtgcgggcg gcttcgagca cattgggcga gatgggatcc
      721 cagccgccga acaccaggtc gtcgagctca gccagtggca cgaactcccg gatgagggga
      781 ttgcgatcgg cgtcgcggtt gcccagtcgg atatgggcca tctggctgac cgacccgatg
      841 ggtgcggtga ggccctggcg ggcggcgatg acgccggcga tgaaggtgga ggccacggcg
      901 cccattccgg gggtcaggac cccgaggcgg ccagtggcgg gtgcgatgtc aagagggttg
      961 ctcatggaga gaagcataag gaagtagaaa tggttgtgca gtatcattca gaaagactga
     1021 agtctccaac aggaacccgc atctgtggac gatccaatcc tccccaatct caccgtgcag
     1081 cagctggagt acttggtggc tgccgccgca tctcccaccc gcgccgcggc tgctgctgcc
     1141 ctcagcgtca ccccctcggc acttacccaa ggactggccg agttggagcg acgggttggt
     1201 gtccccctgt tcgaacgcca cggccgccac acccggctcc gaccccaggc caccgaggtg
     1261 ctggcccacg cacgccgtgt ggtggccgag acccgcgacc tggcccgatg ggcggagaca
     1321 cggcggaccg gggcggccgg cgttgtccgg ttgggcacca tcgacgcggt ggccgttcac
     1381 taccgagccg aggccatccg ccggcaccgt cgggccgtcc cgggtctgga cctgcggcta
     1441 accgtcgccc catccggtgc gctgttcgac gccctcctgg tcggcgacct ggacctggtg
     1501 gtgtgcgtgg agccgaccgg accgatcgcc ggggtagcga tgtcgccctg cctcgacgaa
     1561 tcgctgtacg cctacgcccc ggacggggcc cgcgcaggac cgcctgagga gtggggtccc
     1621 tgggtgacct atccccgggg ttcgcatacc cgcgaggtga tcgccgcagg gttggctgcc
     1681 ctcggggcac cgtttgcggt ggtcgcagag tcgaaccaac cggaggtact ccgcgagatg
     1741 gtccggctgg gcatgggctg ggccgtgctg ccggccgctc aggcagaggc gggagtcgaa
     1801 ccgttggccc gggtacgccg gcgaccggtc ggggtccgcc atctagtggt ggcccgccgg
     1861 gccgatgtgg catcagatgc ggcggtcgac gcgttggccg ccgttcttac cagtggatga
     1921 ccggtggcca gggtcaggca tctgacctgc ggcatctcac ccctgatacg tgacggcagg
     1981 gttccctctc caccggtacg cttcggccac cggatccgcg gcggttgaaa tcgtggccaa
     2041 ccggtgaaaa tgtcccattc tgcgagaccc accctcgcgc cgacttgaag gtatgcccat
     2101 ggcctggcct gtttctcgcg atgacgaact cttcggctac atcgaccagg aggttgagcg
     2161 gcagaacacc acgttgcagt tgatcgcctc ggagaacttc gcgtctccgg ccgtactgga
     2221 ggccagtggg tctgtcctga ccaacaagta cgccgagggc tatcccggca agcgttatta
     2281 cggcggaaac gtccacgtgg acgaggtcga ggacctggct cgtgaacggg tcaaggccct
     2341 gttcggcgct gaccacgcga acgtccagcc ccactcgggc gctaacgcca acatgtcggt
     2401 gtaccaggcc ctcctcgacc cgggtgacac cgtcctgggc ctcagccttg accacggtgg
     2461 ccacctcacc cacgggtcgc cggtcaatgc cagcgggaaa ctctacgact ttgtgtctta
     2521 cgggctgacg ggcagcgacg agcgcattga catggatcaa ctccgagacc aggcccgggc
     2581 ggcccgcccc aagatgattg tggccggagc gaccgcttac ccccggatca tcgagccggc
     2641 ccccctacgc gagatcgccg acgaggtcgg cgcactgctg atgttcgacg ccgctcacat
     2701 cgccggtcta attgccggcg gcgtacaccc caacccggtg ccgtactgcg acatcgtcac
     2761 cttcaccacc cacaaaaccc tccgtggtcc gcgtggcggg tgcatcctga gccgcgagga
     2821 gtacgcggcg gccatcgata agtcggtctt ccccggctct cagggtggtc cgttggaaca
     2881 ccacatagcg gccaaggccg tggcgttccg tgaagcggct gacccgtcgt tcgccggcta
     2941 cgcccgccag atcgtggcca atgcatcgtc gctggccgcc gccctggtcg gtcacggctt
     3001 tcgtctggtc accggcggga ccgacaacca cctgatggtc gttgacctac ggaccttcga
     3061 tgccgaggtg actggagcgg tggcccagaa cacgctggac cgggcgggca tcgtcctgaa
     3121 caagaacacc gtgcccgatg acccgcgttc accgtttgtg accagtggcg tgcggatcgg
     3181 caccccgtcg accaccaccc aggggatggt ggaggccgag atggccgaga tcgcggacct
     3241 catggtgcgg gcccttcggg gccgggacga cgaagcggag atcgctgcgg tacgggccga
     3301 tgtcaacgcc ctctgcgcac gcttccccgt ctacgtctga gccggtcggg acctcaccgg
     3361 aaccggaccg tgccaatggg tcgttacatc agccggcaag ccggactggc cgtcggagag
     3421 ggatcctgac cccgtgcccg ggatcgttcc ccacctgatt gtcggcgcgg tggccgccct
     3481 ggccaccgcc gcggccacgc cggtcgtccg tcggtttgcc gtcggttccg gactggtggt
     3541 ggcgcccgac gagcggagcg tccacactgc gcctacgccg tccctcggcg gaccgtcgat
     3601 gctgggtggg ttgctggccg gcgtcctgac ggcgtggata gtcggcgact tctccgaggt
     3661 gttcgccgcc ccgacggaga tgctgggtgt ggtctcggcc gccgtggtga tctgcgtggt
     3721 gggagtgatt gacgacgtcc gacccgtctc gcccccggcc aaggtggccg gcatggtgct
     3781 ggccggcagc gtcctgtcgc tgaccggtgt gtccctagtc gtcctgcgca tcccgtttct
     3841 ggacgtggtc ctactgtccc cggacctttc ggcgctgctg acagtggttt gggtggtgct
     3901 cttggtcaac gccttgaacc tcatcgacgg cctggatggg ctggcggcag ggattgtggc
     3961 catcgccgct gcgaccttct tcctgtacgc gctgcgcctg ggcgacgagg gtctcctgtt
     4021 tgagggcaac ccgggctcga tgctgg
//
LOCUS       DASCMR010000273         1606 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001341787, whole genome shotgun sequence.
ACCESSION   DASCMR010000273 DASCMR010000000
VERSION     DASCMR010000273.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1606)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1606)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1606
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001341787"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..826
                     /locus_tag="QGG16_06430"
     CDS             <1..826
                     /locus_tag="QGG16_06430"
                     /inference="COORDINATES: protein motif:HMM:NF023266.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ERAP1-like C-terminal domain-containing protein"
                     /protein_id="HJP24945.1"
                     /translation="LADLSHPTGFLDLVASVTGRPGGEVDLAVWQAVLRGLGTIDLVA
                     PERHARWAGQAGDLLAGIVDHLGWIPRLDEDDRTRQLRGSVLAAAGTLADDGAVLAEA
                     RRRWADPTIDSDPAVAAAVVSIVASNGDAVDRSECRHRSKTAATAQDEQRHLRALALF
                     PASTEVGLLLEEVHGGMIRTQDAPFLLRSALTHPTERVAVWQSITDRWTDLSERLPSN
                     SISRMLEGVRALVGDVDPEVDAFLDAHPVPQGALVVAQHRERRLVNQRLRNRLLDT"
     gene            complement(844..1377)
                     /locus_tag="QGG16_06435"
     CDS             complement(844..1377)
                     /locus_tag="QGG16_06435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24946.1"
                     /translation="MGRGPGIRRRLGLTALLSLLGIVASACGADGSTPLDLEAVERQV
                     PEVLLPAHPDLITDVDCGEPASTGLGPMSCTALVAGVEIPVIVHRPAVDGRIRVESPA
                     DLVAAVDLAGLAAERLTIDTGVTAQVSCAPAVRVAFAGQTFDCVATDPDGRTLDLVIT
                     LVDAGGGFRLDAAPASD"
     gene            complement(1338..>1606)
                     /locus_tag="QGG16_06440"
     CDS             complement(1338..>1606)
                     /locus_tag="QGG16_06440"
                     /inference="COORDINATES: protein motif:HMM:NF026109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="oxidoreductase C-terminal domain-containing
                     protein"
                     /protein_id="HJP24947.1"
                     /translation="EPFTPVPWFWSDQYDRKVQLAGRTHPDAEVRVVAGSLAEHRFVA
                     YYRLGERFLGVLGVNRPRQVMQSKGLLEQDASWDEALAFAADWD"
BASE COUNT          259 a          558 c          549 g          240 t
ORIGIN      
        1 cctggccgac ctgagccacc ccactggctt tctggacctg gtcgcctcgg tgacgggacg
       61 acccggaggc gaggttgacc tggccgtctg gcaggccgta ctgcggggac tgggaaccat
      121 cgacctcgtg gcacccgaac ggcacgcccg gtgggctggc caggctggtg acctcctggc
      181 cggcatcgtc gatcacctcg gctggatacc ccgactcgac gaggacgacc ggacccgtca
      241 gctgcggggt tcggtactag ccgccgcggg aaccttggcc gacgatggtg cggtgctggc
      301 tgaggcccgc cgccgttggg ctgatcccac catcgacagt gatccggcgg tggccgccgc
      361 cgtggtgtcg atcgtggcct ccaacggcga cgctgtcgac cggtccgagt gtcgccaccg
      421 atccaagacc gccgccacgg cccaggacga acagcggcac ctgcgggcgt tggccctctt
      481 cccggcctcc accgaggtcg ggctcctgtt ggaggaggtc cacggcggca tgatccgaac
      541 ccaggacgcg cccttcctgt tgcggtcagc gttgacccac ccgacggagc gggtcgccgt
      601 ctggcagtcg atcactgacc ggtggaccga cctgtccgaa cgccttcctt ccaacagcat
      661 ctcccggatg ctcgagggcg tccgggccct cgtcggtgac gtagacccag aggtggatgc
      721 gttcctggat gcccacccgg tgcctcaggg agccctcgtg gtggctcagc atcgggagcg
      781 acgtctagtc aaccaacggc tacggaaccg tctgctcgac acctgaacgg cggtgtccgt
      841 ccatcagtcg gaggcgggag cagcgtcgag tcgaaagccg ccgccggcat cgaccagtgt
      901 gatcaccagg tcaagggtgc gaccgtcggg atcggtggcc acacagtcga aagtctggcc
      961 ggcgaaggcc acccgcacgg ccggggcaca cgacacttgt gccgtcactc cggtgtcgat
     1021 ggtcagacgc tcagcggcca gtccagccag gtccacggcg gctaccaggt cggccgggga
     1081 ctcgacacgg atccggccgt cgaccgccgg ccggtggacg atgaccggga tctccacgcc
     1141 ggccaccaat gcggtgcacg acatcggacc taacccggtc gacgcaggtt cgccgcagtc
     1201 cacgtcggtg atcaagtcgg gatgagcggg gagcaacacc tccgggacct gacgctcgac
     1261 agcttcgagg tcgaggggcg tcgatccgtc ggcgccacag gccgatgcca cgatgcccag
     1321 caggctcagg agcgcggtca gtcccagtcg gcggcgaatg ccagggcctc gtcccacgag
     1381 gcgtcctgct cgagtaaccc cttggactgc atcacttgcc ggggccggtt cacgccaagc
     1441 acgcccagga atcgctcgcc gagtcggtag tacgccacga agcgatgttc ggcgagcgat
     1501 ccggccacca cccggacctc ggcgtcgggg tgggtgcggc cggccaactg caccttgcgg
     1561 tcgtactggt cgctccaaaa ccacggcacg ggggtgaacg gctcgg
//
LOCUS       DASCMR010000274         3476 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001344427, whole genome shotgun sequence.
ACCESSION   DASCMR010000274 DASCMR010000000
VERSION     DASCMR010000274.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3476)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3476)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3476
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001344427"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..834)
                     /gene="ribF"
                     /locus_tag="QGG16_06445"
     CDS             complement(<1..834)
                     /gene="ribF"
                     /locus_tag="QGG16_06445"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR00083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006747 - FAD biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009398 - FMN biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin biosynthesis protein RibF"
                     /protein_id="HJP24948.1"
                     /translation="MEIRTELAPHPADAPRTALTIGAYDGVHAGHRQVIARVRGLAAE
                     RSMASAVVTFDRHPASVVRPESAPLLLTDPQQKLEQLAMTGVDLTMVVPFDEDLALES
                     ADEFVRHVLVGCVGAGLVVVGEDFHFGHQRQGNVALLRELGEELGFEVLGMGLVGLDG
                     QPTRDHEQVSSTFIRRALSRGDLERANAMLGRPYEIRGPVGGGDRRGRELGFPTANVR
                     VDPAMLLPEDGVYAGWYERPDGSVHATAISLGTRPHFYDDGARLLEAHLLDANPTEAI
                     DT"
     gene            complement(917..1843)
                     /gene="truB"
                     /locus_tag="QGG16_06450"
     CDS             complement(917..1843)
                     /gene="truB"
                     /locus_tag="QGG16_06450"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR00431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HJP24949.1"
                     /translation="MGGPISGRQASGKPAPEGLAVIDKEAGWTSHDVVAKSRGVLGTR
                     KIGHSGTLDPDATGVLVLGVGRATRLLRFLTALGKEYTGQVVLGASTSTLDSSGDVTA
                     TFDMVAVTPAEVADAATRFVGDIEQIPPMVSAVKVGGRRLHEIAREGGEVERAPRPVT
                     VHRFDVTPADEPGVYDVVVTCSSGTYVRTLAADLGEALGGGAHLRKLRRTAVGPFTLA
                     EAHPLESPVLLPMAEAFRDLPAVVVDEATAVDISYGRPMDAEALGLGSAGLDVDGPWP
                     VLGPDGSLLAVYGPHGDRPGRVKPIMVLAPTS"
     gene            complement(1846..2313)
                     /gene="rbfA"
                     /locus_tag="QGG16_06455"
     CDS             complement(1846..2313)
                     /gene="rbfA"
                     /locus_tag="QGG16_06455"
                     /inference="COORDINATES: protein motif:HMM:TIGR00082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HJP24950.1"
                     /translation="MGRSAQRRPRFGGSTRGYQRTDRLNELLVRILAGELERIDDDRL
                     GFVTITGVETDQDLSIARVFLTADIDDAELLEAMADHRPRLQRAIGDQARVRRVPPLT
                     FVVDDTARSADRIEEILRGIGPTTATDAMDAAAMEAAAIAGEQSPEGDPSEEE"
     gene            complement(2322..>3476)
                     /gene="infB"
                     /locus_tag="QGG16_06460"
     CDS             complement(2322..>3476)
                     /gene="infB"
                     /locus_tag="QGG16_06460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HJP24951.1"
                     /translation="VLGQLAEHDLVPEAWGGVTICVEVSALENLGVDDLLDNLNVIAE
                     VEDLRADPDGRSQGVVLESFLDIGRGPVATVLVQRGTLKVGDPLVAGAAWGRVRALVD
                     DQGRPVKEAGPSAPVQVLGLSDVADAGEGFVVAPNEKVAGRVADKRGHWRRQANIGRD
                     AHALSGGARLEDIFEQIQKGEAATLNLIVKADVNGSLEAVTGSLRKLEREDVRLAFVH
                     RAVGRITENDIQLAATSNATIIGFNVRPERKAREMAEAEGVEIRSYEIIYKLIEDIEA
                     AMLGMLAPKFEEVVTGDAEVREIFSVPRIGKIAGCYVTNGTITRGSKVRFLREGTIIW
                     KGEISSLRRFKEDVREVQSGYECGIGLSDYQDLKDGDVIETFEEREIART"
BASE COUNT          558 a         1200 c         1136 g          582 t
ORIGIN      
        1 cgtgtcgatc gcttccgtcg gattggcgtc aagcaggtgg gcctccagca ggcgggctcc
       61 atcgtcgtag aaatgcggtc gggtgcccaa cgagatcgct gttgcgtgta cggatccgtc
      121 gggccgctcg taccagccgg cgtatacgcc gtcctcgggt aacagcatcg ccgggtcgac
      181 ccggacgttg gctgtcggga agccgagttc gcgaccccgg cggtcgccgc cacccaccgg
      241 gccccggatc tcgtacgggc ggcccagcat ggcgttggcc cgctctaggt cgcctcgcga
      301 cagagcccgt cggatgaacg tggacgacac ctgttcgtgg tctcgggtcg gctgcccatc
      361 gaggccgacc aggcccatac ccagcacctc gaagcccaac tcctctccca gctctcggag
      421 gagggccacg ttgccttgcc gctggtgtcc gaagtggaag tcctccccca ctacgacaag
      481 gccggcgccc acacagccga ccagcacgtg tcgcacgaac tcgtcggctg actccaaggc
      541 caggtcctcg tcgaagggga cgaccattgt cagatccact ccggtcatgg ccaactgctc
      601 gagcttctgc tgcgggtcgg tcaggagtag tggcgccgat tcggggcgga cgacgctggc
      661 cggatggcgg tcgaaggtga ccaccgctga ggccatggac cgctcagcag ccaggccacg
      721 aaccctggcg atcacctgcc gatgcccggc gtggactccg tcgtaggcgc cgatggtcag
      781 agcggtgcgc ggcgcatcgg cgggatgggg agcgagctcc gttcggatct ccacggcggt
      841 gaggctagcc accgacctcc ggccagccgg gaccggccca ctggattgcc cagcgggtag
      901 cgggtgaaat acctggtcag gaagtgggcg ccagcaccat gatgggcttc acccgcccgg
      961 gccggtcgcc gtggggtccg tacacggcca acaggctccc gtcggggcca agcaccggcc
     1021 acggaccatc cacatcgagc cccgctgagc ccaggccaag cgcctcggcg tccatgggcc
     1081 tgccatacga gatgtcgacg gccgtggctt catcgaccac cacggcgggg aggtcgcgga
     1141 aggcctcggc catggggagt agcaccggtg actccagggg atgggcctcg gcgagggtga
     1201 agggcccgac cgcggtgcgc ctcagtttcc ggagatgagc acccccgccg agcgcctcgc
     1261 ccagatcggc agccagtgtc cggacgtacg ttcctgatga gcaggtcacg acgacgtcgt
     1321 agacgcctgg ctcatcggcc ggggtcacat cgaatcggtg cacggtgacc gggcggggtg
     1381 cacgttccac ctcgccacct tcccgggcga tctcatggag tcgtcgcccc cccactttga
     1441 cggccgagac catcggtgga atctgctcga tgtcccccac gaatcgtgtg gcggcgtcgg
     1501 ccacctcggc tggggtgacc gccaccatgt cgaaggtggc cgtcacatcg cccgacgagt
     1561 ccaacgtgga cgtcgacgca cccaggacga cctgaccggt gtattccttg cccagcgcag
     1621 tcaggaatct gagcaaccgg gtggcccggc ccacgccgag caccaggacg ccggtggcgt
     1681 caggatccag agtgccggaa tggccgatct tgcgcgtgcc cagcacgcca cgggacttgg
     1741 ccaccacatc gtggctggtc cagccggcct ccttgtcgat gaccgccaga ccttccgggg
     1801 ctggcttacc agaggcctgt ctcccagaaa tgggcccccc catggtcact cttcctcgga
     1861 agggtcgcct tcgggtgact gttccccagc tatggcggct gcctccatgg ctgcggcatc
     1921 catggcgtcg gtggcggtgg tcggtccgat cccgcgcagg atctcctcga tgcggtcggc
     1981 cgagcgggcg gtgtcgtcga ccacaaaggt caacggcgga acccgtcgca cccgagcctg
     2041 gtcaccgatg gcccgctgca gccggggccg atggtcggcc atggcttcca ggagctcggc
     2101 atcgtcgatg tcggccgtga ggaacacccg ggcgatgctc aggtcctggt cggtctccac
     2161 accggtgatg gtcacgaaac cgagacggtc gtcgtcgatt cgttccaact cgccggccag
     2221 gatgcggacc agcagctcgt tgagccgatc ggttcgctgg tagccacggg tcgaaccacc
     2281 gaagcgaggt cgacgctgtg cgcttcgtcc catgatcggc cctaggtgcg ggcgatctcc
     2341 cgttcctcga acgtttcgat cacgtcgccg tccttcaggt cctgatagtc cgagagccca
     2401 ataccgcact cgtagccgga ctggacctcg cggacgtctt ccttgaagcg acgcaacgag
     2461 ctgatctcgc ctttccagat gatcgttccc tctcgcagga aacgaacctt ggaaccacgg
     2521 gtgatcgttc cgttggtgac gtagcaaccg gcgatcttgc cgatccgcgg caccgagaag
     2581 atctcacgga cctcggcgtc gccggtcacg acctcctcga acttcggggc gagcatgccg
     2641 agcatggcag cctcaatgtc ctcgatcagc ttgtagatga tctcgtagga gcggatctcg
     2701 acgccctcgg cctcggccat ctctcgtgcc ttacgttccg ggcggacgtt aaagccgatg
     2761 atggtggcgt tggacgtggc ggccaactgg atgtcgttct cggtgatacg accgaccgcc
     2821 ctgtgcacga aggccaaccg gacgtcctcg cgctcaagtt tgcggaggct cccggtgacg
     2881 gcctccaacg agccgttcac gtcagccttc acgatcaggt tcagcgtcgc cgcctcgccc
     2941 ttctggatct gttcgaagat gtcctcgagt cgggcgcctc cggacagggc gtgggcgtca
     3001 cgaccgatgt tggcctgacg acgccagtgg ccccgcttgt cggccacccg gccggcgacc
     3061 ttctcgttgg gcgccaccac gaagccttca ccggcatcgg cgacgtcaga caggcctagt
     3121 acctgcacgg gtgcggacgg gccggcctcc ttgaccgggc ggccctgatc gtcgacgagg
     3181 gctcgcacgc gaccccatgc cgcgccggcc accagggggt ctcccacctt aagggtgccc
     3241 cgttggacca gcacggtggc caccgggccc cgcccgatgt caaggaagga ctccagcacc
     3301 acgccctggg atcgaccgtc gggatcggca cggaggtcct cgacctcggc tatcacgttc
     3361 aggttgtcca ggaggtcgtc gactcccagg ttctccagcg ctgagacctc gacgcagatc
     3421 gtgacaccgc cccacgcctc gggcaccagg tcgtgttcgg ctagctggcc caggac
//
LOCUS       DASCMR010000275         2712 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001344846, whole genome shotgun sequence.
ACCESSION   DASCMR010000275 DASCMR010000000
VERSION     DASCMR010000275.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2712)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2712)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2712
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001344846"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..680)
                     /locus_tag="QGG16_06465"
     CDS             complement(<1..680)
                     /locus_tag="QGG16_06465"
                     /inference="COORDINATES: protein motif:HMM:NF014795.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HJP24952.1"
                     /translation="MATDPQRRTEPQAMSGGLAAVEALQVEGVRHVFGLIGSAAMELF
                     DGLHDADDITYIGVHDERTGTHMADGYARASGRAGVVLAGQNGPGATNLVTGVAQAAA
                     AFSPVVSLAGALATSHVYRDAFQEVDQDALFRPITKRTWTVPSTERIPEMIREAFRVA
                     LSPRRGPVHLNLPRDVLAGTANFDPPWDPAATRVVDLPAGADVPVQQAAALLTTAERP
                     VIVAGAGI"
     gene            complement(680..1444)
                     /locus_tag="QGG16_06470"
     CDS             complement(680..1444)
                     /locus_tag="QGG16_06470"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HJP24953.1"
                     /translation="MTATSPPLVLIHGIGLDRTIWDGMLPALEADRQVVSYDLPGHGV
                     APDPLVEPTLRAFADHAITVMDDHGIDRAVLVGFSLGGMINRRVGMDHPDRVAGLVVI
                     ASPHKRSPEAQRLVEERATATARWGMASTIDVTLDRWFTPEFRDDQPEVVADVRRRVL
                     AADSEALARARHVLATGVDELVRPNFLPDLPLLAMTGDYDSGSTPDMARAIASEASSG
                     EVVIVPGVRHLGLLEAPDRFADPLVHFLAGSGRLPG"
     gene            complement(1441..2274)
                     /locus_tag="QGG16_06475"
     CDS             complement(1441..2274)
                     /locus_tag="QGG16_06475"
                     /inference="COORDINATES: protein motif:HMM:NF017532.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HJP24954.1"
                     /translation="MTDHATAPPISDELADAFAADGAVHLEGLFADWVDELAAGIARN
                     EAEPSEFFDDNGTADDAGRFWDDYCNWSRIPEFERFAFDSGIADVAAGLMRSETVQLF
                     HEHVLVKEPGAPRPTPWHCDAPYYFVDGPQTVSIWIPLDPVPTEATLRLIRGSHLWDE
                     AVHPVSWTTMTGFYGDDHTTHSGGFQPAPDPDAEPDRFEVMEWACEPGDAVAFHYRTV
                     HGARGSANLRRAFSLRMVGDDARYVQRRGTTSPPFDGHDMVDGQRLREDWFPMLPLGF
                     G"
     gene            2498..>2712
                     /locus_tag="QGG16_06480"
     CDS             2498..>2712
                     /locus_tag="QGG16_06480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24955.1"
                     /translation="MSSKNSLGSASLRATPAASTSTQPANSPRRHTAPVGSESSDHFL
                     VDPSGRHGLRISAGRAPFGLVGWRIAPR"
BASE COUNT          430 a          888 c          981 g          413 t
ORIGIN      
        1 ttgatcccgg cgccagccac gatgaccggc cgctcagctg tggtcaacag ggcagcagcc
       61 tgctgcaccg gcacgtcggc accggctggc aggtcgacca cccgggtagc cgcggggtcc
      121 cacggcgggt cgaagttggc ggtgccggcc agcacgtcgc gggggaggtt caggtggacg
      181 ggccctcgcc ggggggacaa cgcgacccgg aacgcctcgc gaatcatttc ggggatccgt
      241 tcggtagacg ggacggtcca ggtccgcttc gtgatggggc gaaacagggc gtcctgatcg
      301 acctcttgga aggcgtcgcg gtagacgtgg ctggttgcca gtgcaccagc cagggacacc
      361 accggcgaga aggctgccgc ggcctgggcc actccggtca ccaagttggt ggcaccgggg
      421 ccgttctgcc cggctaggac taccccggcc ctgccggagg cccgggcgta cccgtcagcc
      481 atgtgcgtgc cggtgcgctc gtcgtggaca ccgatatagg tgatgtcgtc ggcgtcgtgg
      541 agcccgtcga acaactccat ggcagccgag ccgatcagtc caaatacgtg gcggaccccc
      601 tcgacctgca gggcttctac cgcggcaagg ccaccggaca tggcctgcgg ttcggtacgt
      661 cgttgcgggt ctgtcgccat cagccgggga gtcttcccga tccggcgagg aagtgcacaa
      721 ggggatcggc gaaccggtcg ggtgcctcca gcaaaccaag gtggcggacc ccggggacga
      781 tgacgacctc cccggaggag gcctcggagg cgatggcccg ggccatgtcg ggggtactgc
      841 ctgagtcgta gtccccagtc atggcgagta gaggcaggtc aggtaggaaa tttggtcgga
      901 ccagctcgtc gacgccagta gccagcacat gacgggcccg ggcgagggct tcgctgtcgg
      961 cggccaggac acgtcgacgg acgtcggcca ccacctctgg ctgatcgtca cggaactccg
     1021 gagtgaacca acggtccagg gtgacgtcga tggtggacgc catgccccac cgcgcagtgg
     1081 cggtggcccg ctcctcgacc aggcgttgag cctcggggct ccgcttatgc ggcgacgcga
     1141 tgaccaccag accggccacc cggtccgggt ggtccatgcc cacccgacgg ttgatcatgc
     1201 cgcccagaga gaatccgacc agcacagccc ggtcgatgcc gtggtcatcc atgaccgtga
     1261 tggcatggtc ggcgaaggcc cgcagcgtgg gctcgacgag tgggtccggg gcgacaccgt
     1321 ggcccgggag atcgtaggac accacctgac gatcagcctc gagcgccggg agcatcccgt
     1381 cccagatggt ccggtccagc ccgatcccgt ggatgaggac cagcggcggg ctggtagcgg
     1441 tcacccgaat ccgaggggca gcatggggaa ccagtcttcg cggaggcgct gaccgtcaac
     1501 catgtcgtgg ccgtcgaacg gcggcgaggt ggtgccccgg cgctgcacgt agcgggcgtc
     1561 gtctccgacc atgcgcagcg agaacgcccg ccggaggttc gccgaccctc gggcgccgtg
     1621 gacggtccgg tagtggaagg ccacggcgtc gcccggctcg cacgcccact ccatgacctc
     1681 gaaccggtcg ggttcggcgt cgggatctgg tgccggctgg aagcctccgc tgtgggtcgt
     1741 gtggtcgtcg ccgtaaaagc cggtcatggt ggtccagctc accggatgga cggcctcgtc
     1801 ccataggtgg gacccgcgga tcagacggag ggtggcctct gtcggcacgg ggtccagtgg
     1861 gatccagatg ctgaccgtct gtgggccgtc cacgaagtag taaggagcgt cgcagtgcca
     1921 gggggtcgga cggggcgcac ccggctcctt gaccagcacg tgctcgtgga acaactgcac
     1981 ggtctcggag cgcatcagtc cggcggccac gtcggcaatg cccgaatcga aagcgaaccg
     2041 ctcgaactcg gggatgcgag accagttgca gtagtcgtcc cagaagcgtc cggcgtcatc
     2101 agcggtgccg ttgtcgtcga agaactcgct gggttcagcc tcgttgcggg ctattccggc
     2161 ggccaactcg tcgacccagt cggcgaacag cccctcaagg tgcacggctc cgtcggcggc
     2221 gaacgcgtcg gccaactcgt cggagatggg aggcgcggtc gcgtggtcgg tcacccgggg
     2281 aggatacgtc gccccatctc cgcgatgctt gggggatgcg gaaggtgacg ttgcgtgagt
     2341 tggagcactt cgtggccctt gccgagcatg gttcggtgac cggggcggcc cgggccatcg
     2401 ggctgtccca gcccgccatg tcgacctcgc tgcaggagct ggagagggct ctcggggtga
     2461 cactgttcgt gcggcaccgg ggtcgtcggc agtgccgttg tcgtcgaaga actcgctcgg
     2521 ctcggcctcg ttgcgggcca cccctgcggc cagcacgtcc acccagccgg cgaacagccc
     2581 acgcaggcac accgcccccg tcggcagcga aagcagcgat cacttcctcg tcgatccgtc
     2641 cggaaggcac gggctgagaa taagcgcggg ccgggccccg ttcggcctcg tgggctggcg
     2701 catcgccccc cg
//
LOCUS       DASCMR010000276         3622 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001348643, whole genome shotgun sequence.
ACCESSION   DASCMR010000276 DASCMR010000000
VERSION     DASCMR010000276.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3622)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3622)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3622
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001348643"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..797)
                     /locus_tag="QGG16_06485"
     CDS             complement(<1..797)
                     /locus_tag="QGG16_06485"
                     /inference="COORDINATES: protein motif:HMM:NF039189.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5671 domain-containing protein"
                     /protein_id="HJP24956.1"
                     /translation="MEFVLLIGLVFGIVVYRRRADGRRVDVGLMARRLFEFGFLYGLV
                     VATAIGATGALSRLVQVVEDGRQSEPEGLAFWLSLVIVAGSALVGMTVWLRRRFRTSD
                     TEAESGGWSFYLSTMDLLSTGIVVGSAINVLGWLLDGWSFSPWSVAAVPIWLAVSIVH
                     WRLPGTRRRLHYLVASTAALLGMAVSTAVIVEHLLQWAYEGVMPDPLPFDYAGDTSWA
                     NSWDGLRGSLAPVLAFGVAWWWYWWRHARVFERSPERDGYVLVVGVLG"
     gene            complement(843..1610)
                     /locus_tag="QGG16_06490"
     CDS             complement(843..1610)
                     /locus_tag="QGG16_06490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24957.1"
                     /translation="MPRSVFVHETIDIVGQGQYAYMEHVRGEPTNRMPGMTTLQGSFF
                     VLGFGGGRWPQVVNIWDCGADGWEGWRRNLDRLNLKRRSAFYGDWWDEASRWRTGGYD
                     RVCAGVPGSPTTEEIAERGIRGSLFVNEVFTVRPGTQVEFLAEVVECRVPVFADHGVV
                     ATGLWEVTTNSTEVVMVWATTVDDWVGMRRSMDSARGLDDGDPDDRLLDSQVLIDSYV
                     TAGDTRLMTPLPGTIYGPEGWEEADLEDWLEGAAPEK"
     gene            complement(1755..1827)
                     /locus_tag="QGG16_06495"
     tRNA            complement(1755..1827)
                     /locus_tag="QGG16_06495"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1792..1794),aa:Ile,seq:cat)
     gene            1922..3157
                     /locus_tag="QGG16_06500"
     CDS             1922..3157
                     /locus_tag="QGG16_06500"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012745.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HJP24958.1"
                     /translation="MTDDAVVPHSEHPDLASDATSDEDPVNAQVEQVDGRALPIGTVG
                     DSRTDVSLVVPTFNEAANIGHLLRSLHAVLTRTGAVFELIVVDDDSPDRTWEVATAVA
                     AELPGIRVLRRTGASGLATAVICGWAHARGAVLGVIDGDGQHPPEVVADLVAAMDERT
                     DVAVASRHVPGGGVSNWSAIRRLLSRGAQALGLLLLPGTVGRVTDPMSGFFLVRRDVV
                     ATADLDPVGYKILLEVLARGDVRRVAERPYVFLERAEGESKVAAGHYVGYLRHLMRLR
                     LHPLRSRALVRYLLVTAVALMADAIVFLWIFDRQGWNLTRSAAIAGEAGILLTVALHD
                     LWTFAGRATRGTLDRIRRLLGVQIALGTLLFGRLLAINVLVNWFHLGPLAAFCVALAA
                     ITPASHLLGSRLTWRGVRP"
     gene            complement(3321..3396)
                     /locus_tag="QGG16_06505"
     tRNA            complement(3321..3396)
                     /locus_tag="QGG16_06505"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3361..3363),aa:Asn,seq:gtt)
     gene            complement(3479..>3622)
                     /locus_tag="QGG16_06510"
     CDS             complement(3479..>3622)
                     /locus_tag="QGG16_06510"
                     /inference="COORDINATES: protein motif:HMM:NF016432.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor-like helix-turn-helix DNA-binding
                     protein"
                     /protein_id="HJP24959.1"
                     /translation="TEPQTLEQVGAHFGVTRERVRQIEARTMSKLKHPNRPQRLRDYL
                     DDD"
BASE COUNT          650 a         1260 c         1117 g          595 t
ORIGIN      
        1 cccagaaccc ccacaacgag cacatagcca tcgcgctccg ggctgcgctc gaagactcgg
       61 gcatgccgcc accagtacca ccaccaggcc actccgaagg ccagcacggg cgccagagac
      121 ccccgtaagc catcccagct gtttgcccac gaggtgtccc ccgcatagtc gaagggcagc
      181 gggtcgggca tcactccctc gtaggcccat tggaggaggt gctcgacaat caccgctgtg
      241 ctgaccgcca tgccgagaag ggcagcggtg gaggccacca ggtagtggag gcggcggcgg
      301 gtgcccggta gccgccagtg aacgatcgaa acggcaagcc agatcggtac ggcggcaacg
      361 gaccaggggc tgaacgacca gccgtcgagc aaccacccca ggacgttgat ggccgaaccc
      421 acgacaatgc cggtcgacag gaggtccata gtcgacaggt agaacgacca cccgccggat
      481 tccgcctcgg tgtccgatgt ccggaaccgt cggcgtagcc agacggtcat gccgacaagt
      541 gccgacccgg ccacgatcac cagactcagc cagaaggcca gtccttccgg ttcgctctgt
      601 cgaccgtcct ccaccacctg caccaggcga ctgagggcgc cagtggcacc aatggcggtg
      661 gcgacgacca ggccgtacag gaagccgaac tcgaaaagtc gacgagccat caaaccgacg
      721 tctacccgac gcccgtcggc ccgcctgcgg tacacgacga tgccgaacac caacccgatg
      781 agcagaacga actccacgag acctccccat gaagcctcgc gcagtagatc agcgcgccgg
      841 tgtcacttct ccggagccgc gccttccagc cagtcttcga ggtcggcctc ctcccaaccc
      901 tccgggccgt agatggtccc ggggagtgga gtcatcagcc gggtgtcgcc ggcggtcaca
      961 tagctgtcga tcaggacctg agagtcaagg agacggtcgt cgggatcccc atcgtcgagg
     1021 ccgcgagcgg aatccatgct gcgacgcatc cctacccagt cgtcgacagt ggtggcccac
     1081 accatgacca cttccgtgga gttggtggtc acctcccaga gcccggtggc cactacccca
     1141 tggtcggcga acacggggac ccgacactca accacctcag ccaggaactc cacttgggtc
     1201 cccggtcgaa ccgtgaatac ctcgttgacg aacaacgacc ccctgatgcc ccgctcggcg
     1261 atctcctctg tggttgggga cccgggcacc ccagcacata cccggtcgta ccctccggtc
     1321 ctccaccggg atgcctcgtc ccaccaatcg ccgtagaagg cgctacggcg cttcaggttg
     1381 agccggtcga ggtttcgccg ccatccctcc cagccatccg caccgcagtc ccagatattc
     1441 accacctggg gccagcgtcc accgccgaag ccaagaacaa agaaagagcc ctgaagggtg
     1501 gtcatgcccg gcatccggtt cgtcggctca ccccggacgt gttccatgta ggcgtactga
     1561 ccctgaccga caatgtcgat ggtctcgtga acgaataccg atcggggcac accgccattc
     1621 ttcaccgacc aggggcacgc acgccaacca cactgctgtt gtgccgaaga cggccagtcc
     1681 ctggggctgg ataacacctg gcaggagccg gtctgctttc cccaaccaac ccctgcacag
     1741 gtgatcgaac ctcgtgggcc gggcggggat cgaacccacg accgagcgat tatgagtcgc
     1801 ctgctctaac cactgagcta ccggcccgcc cgcagtctgg caggagacgc cagcggcacc
     1861 tcggcaccgg gcatccatcc ggtaccttgg cgatgatccg acggccaccg atggagcgac
     1921 cgtgaccgac gacgcggtcg tcccacattc cgaacacccg gacctggcat ccgacgcgac
     1981 gtcggatgag gatccggtta acgcccaggt tgaacaagtg gatggtcggg ccctgccaat
     2041 cggcactgtg ggcgattcgc ggacagatgt cagtctcgtc gtccccacct tcaacgaagc
     2101 ggccaacatc ggtcacctcc tccgctcgct acacgcggtc ctgacccgga ccggagccgt
     2161 attcgagttg atcgtggtcg acgatgacag tccggaccgg acctgggagg tggccaccgc
     2221 ggtcgccgct gaactcccgg gcatccgggt gcttcgccga accggcgcat ccggcctggc
     2281 taccgcagtc atctgcggat gggcccacgc ccgtggagcc gtcctcggcg tgattgacgg
     2341 ggatggccag cacccgccag aggtggtggc cgacctggtg gccgccatgg acgagcggac
     2401 cgacgtggcc gtggctagcc ggcacgtgcc cggaggcgga gtttcgaact ggtcggccat
     2461 ccgacgcctg ctctcccggg gtgcccaggc cctcggcctc ctcctcctgc cgggcacggt
     2521 gggccgggtg accgacccca tgagcggatt ctttctagtc cgacgggacg tggtggccac
     2581 tgcggatctt gatccagtgg gctacaagat cctgctagag gtgctggccc gtggcgatgt
     2641 ccgtcgggta gccgagcgac cctacgtgtt cctcgaacgg gctgagggtg agtcgaaggt
     2701 cgctgccggc cactacgtcg gctacctccg ccacctcatg cggttacgac tccatccgct
     2761 gcgaagccgg gcactggtgc gttacctgtt ggtcaccgct gtggcattga tggccgacgc
     2821 catcgtcttc ctctggatat tcgaccgcca gggctggaac ctgacccgtt cggcagctat
     2881 cgctggcgaa gcggggatcc tcctcaccgt ggccctgcat gacctttgga cgtttgccgg
     2941 gcgggctaca cggggcaccc tcgaccggat ccggcgcctc ctcggagtcc agatcgcctt
     3001 gggcacgctg ttgttcgggc gtttgcttgc gatcaacgtg ctggtcaact ggttccacct
     3061 cggtccgctg gccgcgttct gcgtggcttt ggcagccatc acgccggcca gccacctcct
     3121 cggctcccgt ctcacctggc ggggtgtgcg tccttgatca gagtgggaaa ccaccggccc
     3181 catgggtcag tccggccggc agggccgacc cctgccgttt cgcggcttta gagcaggcaa
     3241 cttggtatct ccaatgtgac tcatcacttt ggacgcgaac agggccggcc ccgaaagacc
     3301 gaccctgaac tgcatgtttg tggctccggg ggtggggatc gaacccacga cctgcggatt
     3361 aacagtccga cgctctgcca gctgagctac cccggaatgg gcgtgcgcag gataccagag
     3421 gcaccccatc tcccggccgg gccgaagacc tcgatcagac gtgtagccgg tcgtagcgtc
     3481 agtcgtcgtc caggtagtcc cgaagccgct gcgggcggtt cggatgcttc aacttggaca
     3541 tggtccgagc ctcgatctga cgcacccgtt cgcgtgtcac gccgaagtgg gcgccgacct
     3601 gttcaagggt ctgcggctcg gt
//
LOCUS       DASCMR010000277        16209 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001353233, whole genome shotgun sequence.
ACCESSION   DASCMR010000277 DASCMR010000000
VERSION     DASCMR010000277.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 16209)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16209)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16209
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001353233"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..180
                     /locus_tag="QGG16_06515"
     CDS             <1..180
                     /locus_tag="QGG16_06515"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24960.1"
                     /translation="VVVGTEVVVVGTEVVVVGTAVVVVGTAVVGAATSPLEAHPARRA
                     TVSSQTSRRESTGSV"
     gene            402..1613
                     /locus_tag="QGG16_06520"
     CDS             402..1613
                     /locus_tag="QGG16_06520"
                     /inference="COORDINATES: protein motif:HMM:NF013044.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HJP24961.1"
                     /translation="MRHDEQVRIIKEMCAHLDGDTNVDAGGLRQNPTITYTDPTQANR
                     EWNEWFRGMPQLIGLSGDLPEAGSFLTNNDYGTPILATRGEDGGFRAFVNSCRHRGTI
                     LETDSHGTKRRFTCPFHAWSYDTAGTLVGMPKAAHFGQVEMECLGLRELPAEERHGLL
                     FVHPQPDGEVDLDWLLGEWFNDEFPTWRFDELKLLTSDEYDIKCNWKLAMDTFGETYH
                     FNALHSNTLALNFHGNVQTYDEDGHLHRMVLCKRAIDQVRQLPEEEWDVTVAGLPVYW
                     LFPNIILMPFEVGVFLVRAIPTPGDPGHHVSKVDFYIRPEAVESNVLGIEVPDFEAFA
                     TQIARSFGEIIRDEDYAMSASQQRSADTGALDQIVFGRNEPALHHYHNTYRSMLGQEL
                     LPLLDKITDDG"
     gene            complement(1628..2089)
                     /locus_tag="QGG16_06525"
     CDS             complement(1628..2089)
                     /locus_tag="QGG16_06525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24962.1"
                     /translation="MDPTTDIPIEDCGDGNSFAKVADKPRAVVIGVDDALRDTLMDHL
                     AASGFEVVDYECQDDDVLADGDERIRPSDVLVFSFREVTEARRNACRSVRRSHPKNPV
                     VIELMNPKTFRYADLLLGARVVSAPVSRESLQKAALDAWSTPNPIYEMLRR"
     gene            2214..3233
                     /locus_tag="QGG16_06530"
     CDS             2214..3233
                     /locus_tag="QGG16_06530"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HJP24963.1"
                     /translation="MERRTWDPTFGVSVEEVWDSSPDALVVVERGGRILAANQAAYLL
                     FGHPAKTLVGRSVEDLIPEDLRKVHAHHRTSFENDPLARPMGTGLRLQGRRADDTAFP
                     IHVSLAPLDGGERTLAAVRDMSAWVEAEERLQHAERSRDLAEDHERIARELHDTVIQE
                     LFAAGIGLQALQATYSQPERLAEVVAALDGTIRTIRTVIFDLSSPVHARSGLRSQVEA
                     LVADVVRTLGIEPRCHFRGPLDTGVPDELVEEALAVVRESLTNVARHAEATTVELRID
                     VSDRLTIEVVDDGTGIADEPPRRSGLANLEDRASRHAGTFSACRNPIGGTTIEWSVPM
                     RSDGS"
     gene            complement(3258..3902)
                     /locus_tag="QGG16_06535"
     CDS             complement(3258..3902)
                     /locus_tag="QGG16_06535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HJP24964.1"
                     /translation="MSLRIFLVDDHDVVRRGLTALIDAEDDLEVVGTSSSAAGTLDAI
                     AATRPDVSVLDVRLGDGNGVEVCRDIRSAHPKVACLILTSFEDDQALVEASLAGAAGY
                     VLKRVQGDELLTAIRLVGKGRRLLAPGTTRLALRRLRESGEAAVEELSPQERRIFDLI
                     GDGLSNREIADRMYLAEKTVKNYVTNLLRKLGMSRRTEAAAFAARLDERRRSTS"
     gene            complement(3899..4195)
                     /locus_tag="QGG16_06540"
     CDS             complement(3899..4195)
                     /locus_tag="QGG16_06540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24965.1"
                     /translation="MNTAHHLLSGHRTETRLVDADGERLLRTVVVATLGSAVFITGFF
                     ALVTWLVAPEAGVVSALALGGLSGIWVSVLAGGVIGNGIHEARHERAERDKSKA"
     gene            complement(4192..4719)
                     /locus_tag="QGG16_06545"
     CDS             complement(4192..4719)
                     /locus_tag="QGG16_06545"
                     /EC_number="1.20.9.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR02694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050611 - arsenate reductase (azurin)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (azurin) small subunit"
                     /protein_id="HJP24966.1"
                     /translation="MIAGGAIGATLGGGVVAPVALTWERDRFGNFTAVTARFAEVVVA
                     DLSQLVVGEPVTFEYPAEGQRNVLVRIGRPVEHGVGPDLDLVGFSSICPHTGCPFDEY
                     RVDMATLDFCPCQFITFDVAADGIPSFNQATQHLSRILLRLEGDDVVAYGVRRPIYGD
                     TDPLHGVGMKVLEST"
     gene            5481..6887
                     /locus_tag="QGG16_06550"
     CDS             5481..6887
                     /locus_tag="QGG16_06550"
                     /inference="COORDINATES: protein motif:HMM:NF019352.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HJP24967.1"
                     /translation="MPTSNTRHLMTRILIASLAFALLVASCATDDDSPASSTSAAVSG
                     ELHPTPVASDGVFVAEISLTEFAITGTLTVPAGPVVLSVTNFGSAEHNLQFDNGPITP
                     ILGTNRSAVLDLGTLRPGTYPMTCEISGHTEAGMTATLTVLDADDPELTTAASSHGNG
                     AHGGDVDWAEMDRIMLESIRNFPAETTGIGNQILEAVTTADGTKEFHLTSAITPWEVE
                     PGKIVDAWTYNGQVPGPVIRVDVGDRVRVVIDNQLPLGTDVHWHGISTPNDMDGVAPL
                     TQDLIQPGTSFTYEFTAEEPRTGMYHAHHMGHMAIPNGLFGVFTIGEPPVPRGKTIGG
                     VSIPADLEISRIIPMVLNDAGVIGYSLNGKSFPATQPYVVTAGDWIVVDYYNEGLQIH
                     PMHMHQFPQLVFAKDGFPLDHPYFADTINVAPGERYSVLVRPDEPGAWVWHCHILNHV
                     ERDDGMFGMVTAVIVEAA"
     gene            complement(6983..7525)
                     /locus_tag="QGG16_06555"
     CDS             complement(6983..7525)
                     /locus_tag="QGG16_06555"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24968.1"
                     /translation="MSQIPSSPEMKSDQTQEEQVVARARDYDEARQRAADLHRDRIVA
                     GEEERLADSDFHAASNDRFAANLTADDRTMGFTGTTEAPSSDGEPVDQKTGWANHRYQ
                     VLLEARKRLDVLCDRADRELDETLGALLSATDGLRQVAGEDEESDDAEAFDLVVGGRV
                     DAAVKESDEAVDLTGATSAA"
     gene            7619..8752
                     /locus_tag="QGG16_06560"
     CDS             7619..8752
                     /locus_tag="QGG16_06560"
                     /inference="COORDINATES: protein motif:HMM:NF013044.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ring-hydroxylating oxygenase subunit alpha"
                     /protein_id="HJP24969.1"
                     /translation="MGPTAAEREALATGWDPNPARSMSLSTDAYTDPRWFDVEVETVF
                     SRTWQWVCHVEKVRDPGTYTTTTIADRSVVVARDVDHTLRAFSNVCMHRAHELLTGDG
                     TVKRITCPYHAWSYGLDGGLLTAPHTDHLVDFDPDSICLDALAVEEFGGFVYVNLDSE
                     ARALAEQAGDLAAEIAHWAPDVADLTHAHRLTYEIASDWKNVIDNFLECYHCPVAHRD
                     FCTLVNMDTYEVSTHGIWSSHMAEAGRSDNTAYPVDDATVTDHAVWWLWPTTCLMRYP
                     GRGNFIVMNVVPDGPGRTRETYDFFFETAEATEAELEAIRYIDDVLQAEDIALVESVQ
                     RGMTTPAFTQGRIVHDPAGSGKSEHGVHHFHGLLLDAYRSAGR"
     gene            8883..9665
                     /locus_tag="QGG16_06565"
     CDS             8883..9665
                     /locus_tag="QGG16_06565"
                     /inference="COORDINATES: protein motif:HMM:NF012673.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HJP24970.1"
                     /translation="MSPTPAAPAAQQSDLDFAIAIARAAGALTLELFRRPDVAVEGKE
                     DGTPVTAADRGAERLLRERIGATYPDDAVVGEEESDTDGTSGRTWVLDPIDGTQSFIH
                     GVPLYANLVALEDEHGPVVGVINIPALDECVWAGRGLGCFVNGEPTSVSDREDLHGSC
                     IVTSGVDYWPSAAALDEFVGRNAVIRTWGDAYGYVLVATGRAHAMVDPIVSRWDVAPM
                     LTILPEAGGVFTDLSGAVTAEGGDALATNLALAPQILELVGR"
     gene            complement(9716..10732)
                     /locus_tag="QGG16_06570"
     CDS             complement(9716..10732)
                     /locus_tag="QGG16_06570"
                     /inference="COORDINATES: protein motif:HMM:NF013567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HJP24971.1"
                     /translation="MNRVAVLGAGAVGARVARQLLSSDAVEQVLLRDISAERLARASR
                     SLGDRCRVEHHPFSDSLEADVVVVATPRGTHLEAVIETIAARRPAVLVGDGLAETIAV
                     LRRSGDAARAGVPIAVGSGFGPGMSCVLAAHGASWFDEVDEVHVAKVGTGGPACALVH
                     HRALSRRSYDWRVDDGSGAGDWTRRTGGSGRELAWFPDPVGPRDCYRAALPDPVLLHH
                     ALPTVGRITARVAATRRDRLTAPLPMLSPPHVEGGMGAVRVEVRGRRDDASDVVVLGA
                     TERPAVAAAAVAATTVEWLLAGRHRVAGMAGLAEMVEPVAFLSDLVERDLKASIFEGE
                     RALS"
     gene            complement(10757..10894)
                     /locus_tag="QGG16_06575"
     CDS             complement(10757..10894)
                     /locus_tag="QGG16_06575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24972.1"
                     /translation="MQFIRRALAAVSVAAAVAAALRINGADGIARRSGGWRPLAGPHL
                     R"
     gene            complement(10900..10973)
                     /locus_tag="QGG16_06580"
     tRNA            complement(10900..10973)
                     /locus_tag="QGG16_06580"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(10937..10939),aa:Ile,seq:gat)
     gene            complement(11013..11837)
                     /locus_tag="QGG16_06585"
     CDS             complement(11013..11837)
                     /locus_tag="QGG16_06585"
                     /inference="COORDINATES: protein motif:HMM:NF023511.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3566 domain-containing protein"
                     /protein_id="HJP24973.1"
                     /translation="MAPDDIDDSSEPRPAARSGELFADLGEESTDDLVVDLPEELGDL
                     VDPEGDIEADARTENDVALTAQQSSGDLLAKMSGGDLDDDDLDVSPVFRRERPRVLKG
                     WFGRARAEALPVVERASGAPTGGYRVRRVRRLVRHIEPWSVLKVCLVFYLCVWGLLVI
                     ATRMLWSAADEAGTIGKVESFIEELFALESFTFDSAQIFRIFVLGGLVLVVGGIGVTV
                     VLVVLFNLISDLTGGIRFTMVEEETAVRQRKLRRGDVVVETPVTGTGWQTEGGPGE"
     gene            complement(11928..14462)
                     /gene="gyrA"
                     /locus_tag="QGG16_06590"
     CDS             complement(11928..14462)
                     /gene="gyrA"
                     /locus_tag="QGG16_06590"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012784100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003916 - DNA topoisomerase activity
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006259 - DNA metabolic process [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HJP24974.1"
                     /translation="MADETDVPTTDVAAPGDEAPTLGFIQPIEIQEEMEQSFLDYAMS
                     VIVSRALPDARDGLKPVHRRILWGMYDLGARPDRPTMKCARVTGEVMGKYHPHGDLAI
                     YDALVRMGQNFSLRHPVVHPKGNFGYSPDDAAAAARYTECRLDPIALDLLAGIDEDTV
                     DFTENYSGEFTEPVVLPARFPNLLVNGSQGIAVGMATNIPTHNLGEVIDATIHLIDHP
                     DATPDDLMEHLPAPDFPTGALILGRSGIREAYRTGRGQVRMRARTDIEEGQRSSRIVV
                     SELPYQSSPNLIMSKIRDLVDAREIEGIADINDESAQGRTRIVITLKRDAPALVILNN
                     LFKRTPLQTTFSVNTVALVDEVPRTLNLRELLVAYVDHQVEVVRRRSEFRLAKARDEA
                     HITEGLLKALDLIDDIIALIRGSADRATAREGLMGDDFEFSEVQANHILDMQLARLTR
                     LGRTNLEERMVELQATIAELEAILGDEERLRSVIKDELGEVRARHATPRRSEMVHDPG
                     ELDIEDLIDDEEMVFAMSTSGYVKTMSIGEFRTQGRGGKGVTGAKLKDEDAVAHLIHT
                     TAHAYLLFFSTRGRVYRLKAHEIPSAGRTARGTSIVNLLPLQPDERIQAVIDTRDYES
                     NRFLFFAMRSGRVKKTLFTAYDSSLKAGLIAVRLNDGDELVAVVPTNGDDDLFLVSSS
                     GQTLRISEDDVRPMGRSVAGVRGMKFRDEDVLVSCCVARADATILHLTTEGYGKRTEL
                     DEFTVKGRAGLGVRGIRTTDDRGRVAGALVLTEDEDLFAITTAGMIIRMPATDISVQG
                     RDATGVRVMSPGDGQEVAAVSPVPAGEPDEEFTEELADGLPEVPVE"
     gene            complement(14462..>16209)
                     /locus_tag="QGG16_06595"
     CDS             complement(14462..>16209)
                     /locus_tag="QGG16_06595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA gyrase subunit B"
                     /protein_id="HJP24975.1"
                     /translation="EVTLSEDGSCEVSDDGRGIPVGLHHQYEELTAAEVVLTVLHAGG
                     KFGGEGYKVSGGLHGVGISVVNALSSRVEVEIDRDGSRHYMDFVEGGRLETRLAVSGD
                     SPDGRTGTTVRFWPDESIFDETRFRFQTLSERFQMMAFLNRGLRIRLRDERTDENRGE
                     VDYQYEGGIRDFVAHVNASKESLFSEVGYIEGIEDGQEVEVAFQWNTGFNSDGLHSFA
                     NGINTLEGGMHEEGFRSALTAVMNRYAKKRNLLKDNDDNLQGEDIREGLTAIISARLS
                     DPQFEGQTKSKLGNVEMRSLVQRTTNDRLADWLEEHPPEAKAIVQKAINAQRARVAAQ
                     DARKSARRKSALDGAGMPDKLKDCASKDPRESELFIVEGDSAGGSAVQARDPRTMAIL
                     PIRGKILNVERARADRMLKNNEIQTLIQAIGSGFGDDFDVGRIRYHKVILLCDADVDG
                     SHIRTLLLTFFFRQMRPMVEAGHVYIAQPPLYSTVVGREKVYLKDDHAKEAFLVENPS
                     HKREFQRLKGLGEMDFDELKETTMDPSRRSLLQVTVEMLAIADEVFSTLMGEDVESRK
                     RFIQTNARDVRFLDI"
BASE COUNT         3082 a         5381 c         4822 g         2924 t
ORIGIN      
        1 gtcgtggtgg gcaccgaggt ggtcgtggtg ggcaccgagg tggtcgtggt gggcaccgcg
       61 gtggtcgtgg tgggcaccgc ggtggtgggt gcagccacct cgccgttgga ggcgcatccg
      121 gcgaggaggg ccaccgttag cagccagacg agtcgtaggg aatccacggg ttctgtttag
      181 cacgaggtcc gtcggcggat tgagcggtga cggcccaaaa aatcagctct gaactgcaag
      241 tttgccccga cccaacagac ttgcagagaa gcgctctggt gcccggatca tgctctccgc
      301 ggtggggagg gttcgagtcc ctccgggcac gcccacgcct tcacaagcca gcacatccag
      361 tggatttggc taaccctcta agtttctggt caggtcacgt catgcgacac gacgagcagg
      421 tccggataat caaggaaatg tgcgcccatc tcgacggcga caccaacgtc gatgcgggcg
      481 gcctgcgtca aaacccgacc atcacctaca ccgaccccac ccaggccaac cgtgagtgga
      541 acgagtggtt ccgagggatg ccgcaactca tcggcctgtc cggtgacctt cccgaggcag
      601 ggtcgttcct caccaacaac gactacggga cacccatcct cgccacccgg ggcgaggatg
      661 gtgggttcag ggccttcgta aactcgtgcc gacaccgggg caccatcctc gaaaccgata
      721 gccacggcac taaacgtcgc ttcacctgcc cgttccatgc ctggagttac gacaccgccg
      781 ggaccctcgt agggatgcct aaggccgccc acttcggcca agtcgaaatg gaatgcctcg
      841 gattgcgcga actcccggcc gaggagcgac acgggttgct ctttgtgcat ccccaacccg
      901 acggtgaagt cgacctcgac tggctactcg gcgagtggtt caacgacgag ttcccgacct
      961 ggagattcga cgaactcaaa ctcctcacct ctgacgagta cgacatcaag tgcaactgga
     1021 agctcgcaat ggacaccttc ggcgagacgt atcacttcaa cgcactccac tcgaacaccc
     1081 ttgcactcaa cttccacggc aacgtccaga cctacgacga ggacgggcac ctccaccgaa
     1141 tggtcctatg caagcgagcc atcgatcaag tacgacagct tccagaggag gagtgggacg
     1201 tcaccgtcgc cggcctcccc gtctactggc tattcccaaa catcatcctc atgcccttcg
     1261 aagtcggtgt attcctcgtc cgtgccattc cgacgccggg tgacccgggc caccatgtca
     1321 gcaaggtcga cttttacatc cgcccggaag ccgtcgagtc gaacgtcctc ggcatcgagg
     1381 tacctgactt cgaagccttt gcgacccaaa ttgctcgctc tttcggcgag atcatccgcg
     1441 acgaggacta cgccatgagc gccagccaac agaggtcagc tgacaccggt gcactcgacc
     1501 agatcgtgtt cggacgaaac gagcctgccc tgcaccacta ccacaacacc tatcgcagca
     1561 tgctgggcca ggagcttcta ccactcctcg acaagatcac cgacgacggg taagaagatc
     1621 ctgagcgtca cctccggagc atctcgtata tgggattggg tgtcgaccag gcatctagag
     1681 ccgccttttg aagcgattca cgcgataccg gagcgctgac tactcgtgct ccaaggagca
     1741 agtcggcgta acggaacgtc ttcggattca tgagttcgat cacgaccggg ttcttcgggt
     1801 gggaacggcg gactgaacga caggcgtttc gtcgagcttc tgtgacctcg cgaaatgaaa
     1861 aaaccaggac gtcgctaggc cgaatccgct catcgccgtc agccaagacg tcatcgtcct
     1921 ggcactcata atccacaacc tcaaagcccg acgcagccaa atggtccatg agggtgtccc
     1981 gtagggcatc atcaactcca ataacgacgg cacggggttt gtcggcaacc ttggcaaacg
     2041 agttgccatc gccgcaatcc tcaataggga tatcggtggt ggggtccatg gggtaatcct
     2101 cggaccgaga cagtcaccgc caacagggac cattgtcacc tcctcgagat tcgggacctt
     2161 ggtcccggtc cagcgtcggg gcgaatgcga tctacccgtc ctacgctcga gccatggagc
     2221 gaaggacgtg ggacccgaca tttggagtct cggtcgagga agtctgggac tcctctccgg
     2281 acgctctcgt cgtcgtcgaa cgcggtggac ggatcctggc cgccaaccag gcggcctatc
     2341 tgttgtttgg gcaccccgcc aagacccttg tcgggcgctc ggtcgaggac ctaatccccg
     2401 aggacctccg taaggttcac gcccaccacc gaacctcgtt cgagaatgat ccactagctc
     2461 gcccgatggg caccggcctc cgccttcaag gccgacgggc cgacgacaca gcctttccaa
     2521 tacacgtgag tctggcgcca ttggatggtg gtgagcgcac gttggccgcc gtgcgggata
     2581 tgtcggcttg ggtggaggct gaggagcgtc tccagcacgc cgaacggtcc cgtgatttgg
     2641 ccgaggacca cgaacgcatc gcccgcgagc tccatgacac ggtcatccaa gagctctttg
     2701 ctgccggaat cgggctccag gctttgcaag ccacctactc gcagcccgag cggctcgccg
     2761 aggtggtggc tgcccttgac gggacgatcc gcactatccg aacggtcatc ttcgacctgt
     2821 cgtcgccggt ccatgcaaga tcaggtcttc gctcacaagt tgaggcccta gtcgccgatg
     2881 tagtgcgcac cctgggaatc gagccacggt gccactttcg cggaccgctc gacaccgggg
     2941 tccctgacga actggtcgaa gaggccttgg ccgtggtgcg ggagagcttg accaacgtgg
     3001 cccgtcatgc cgaggcgaca acggtcgaac tgcgaatcga tgtctccgac cggctcacca
     3061 tcgaagtggt tgacgatggg acggggatcg ccgacgagcc accccgacgc agtggcctcg
     3121 cgaaccttga ggatcgagcg tctcgccacg cggggacctt tagcgcctgc cggaacccga
     3181 ttgggggaac aactatcgag tggtcggtgc caatgcggtc cgacggatct tgatccgctc
     3241 tttattggtg ccgccggtca acttgttgac cgtcggcgct cgtccaaccg ggcagcgaat
     3301 gccgcggctt cggtccggcg cgacatcccc aacttccgta gcaagttggt gacgtagttc
     3361 ttgactgtct tttctgcgag gtacatgcga tccgcgatct cgcggttgga tagtccgtcg
     3421 ccaatcaagt cgaagatgcg ccgttcttgc ggtgagagtt cctcgacggc tgcctcgccg
     3481 ctctcgcgga gccgccgcaa ggccagtcgg gtggtgccgg gggcaagaag acgccttccc
     3541 tttccgacca gtcggatcgc ggtgagaagc tcatctccct ggactcgttt gaggacgtaa
     3601 ccggcagctc cggcaaggct ggcctcgacg agggcttggt cgtcctcaaa cgacgtgagg
     3661 atcaggcagg caaccttggg gtgtgcggag cggatgtcgc ggcatacctc gacgccgttg
     3721 ccgtctccaa ggcgtacgtc gagaacggat acgtccggtc tcgtcgcagc gatggcgtcg
     3781 agcgtgccgg cggccgaact ggacgtaccg accacctcga ggtcatcctc ggcgtcgatc
     3841 aacgcagtca ggccccggcg gacgacgtcg tggtcgtcaa cgaggaagat gcggaggctc
     3901 acgctttcga cttatcacgt tcggcccgtt catgtcgggc ttcgtggatc ccgttaccaa
     3961 ttaccccgcc agcaaggacc gagacccaga tacctgaaag gccaccaaga gccaaggcgc
     4021 tcaccacccc agcttcgggg gcaacgagcc aggtcaccaa agcaaagaac ccggtgatga
     4081 agacggcgga gccgagggtg gcaaccacga cggtccggag gagccgttca ccgtcagcat
     4141 cgacgagacg tgtttcggtt cggtggcccg acaggaggtg gtgtgcggtg ttcatgtcga
     4201 ctccaggacc ttcataccga cgccgtgcag tgggtcggtg tctccataga tgggtcgtcg
     4261 taccccgtat gccacaacat cgtcgccctc gagccgcagg aggatacgcg ataggtgctg
     4321 ggtggcttgg ttgaacgacg gaatcccatc agctgcgaca tcgaaggtaa tgaactggca
     4381 tgggcagaag tccagggtgg ccatgtcaac ccggtactcg tcaaatgggc agccagtgtg
     4441 aggacagatc gaggagaagc caacgaggtc gaggtcaggg ccgactccgt gttcgaccgg
     4501 ccgaccgatt cgcaccagta cgttgcgctg cccctccgcc ggatattcga aggtaactgg
     4561 ctctccaaca accagttgag aaaggtctgc tacgaccact tcggcgaacc gggcggtcac
     4621 agcggtgaag ttgccgaacc gatcccgttc ccaggtgagg gctaccgggg cgacgacacc
     4681 acctccaagg gtggcaccaa tggcgcctcc agcaatcacg aaatctctcc tggtgagcgg
     4741 cacggtcttc caatcggcgc acgggtggta aatcagacgg tacggacgat cgtggaaggc
     4801 gctcagggtc aaaggtcctg ttgtgcggaa accactcgaa gaagccccat gaatcgggac
     4861 ctctggccct gaaaagcttc ttgggctatc cgtaccgtca aagcatggcc aagcagaagc
     4921 atcgtcgaca tggccgcggg aaatcattcc gtaccccgcg gttcagtccg tggccaactg
     4981 acccccgggt cctcgtcgaa gagtccgacg gagcagtgcg gtcatccatt gtccgactgc
     5041 tcgaaaggga aggctttcaa gtagtcggat gtggaggccc ggacgacaat gcgggatcac
     5101 gatgcccgtt gatgaaaccg gctagttgtc cggcagccgc cgaagccgac gtgatcttct
     5161 tctcgttccc tctatccaac ccgaccaacc gggagatcct ccggctgctc aagtgtcgac
     5221 attcgaacac gccgatagtc gtcgaggtcc ccaaaccgca ggtcgcggtc cacagcgaac
     5281 ttctagccgg tacccacgtc gtctattcac caataacccg acgaagcatc actcatgcag
     5341 tgcggaaagc ctgggtgtct ccactacgga ccgttgactc aagacgttcc tccacgacca
     5401 ccgggcccta gcgctctgac acttgattca tcagacccat cgtccgtcaa cacggcggac
     5461 caaccaatgg aggaccttcg gtgccgacat caaacacccg ccacctcatg acacgaatcc
     5521 tcatcgcatc tctggccttt gccctcttgg tggccagttg cgctaccgac gacgactctc
     5581 cggcttcttc gacctcggca gccgtctccg gagaactcca ccccaccccg gtggccagcg
     5641 acggggtctt tgtagctgag atttctctaa ccgagtttgc cattaccggc accctgaccg
     5701 tgccggcggg tccggtcgtc ctatccgtga ccaacttcgg ttcagccgaa cacaacctcc
     5761 aattcgacaa cgggccaatt acccccatat tgggcaccaa ccgttcagct gttttggact
     5821 tggggacgct acgtccaggt acgtatccca tgacgtgcga gatctccgga cacacggagg
     5881 ccggaatgac tgccaccctg accgtgcttg acgccgatga cccggagctg accacggcgg
     5941 cctcctccca tggaaatggt gcccacggag gagacgtcga ctgggccgag atggaccgaa
     6001 tcatgttgga gtcgatccga aacttcccgg ccgagaccac cggcatcggc aaccagatct
     6061 tggaggcagt caccaccgcc gacggaacca aggaattcca tctgacttct gccatcacac
     6121 cgtgggaagt cgagcccggg aagatcgtcg atgcctggac ctacaacggc caagtccccg
     6181 gcccggtcat ccgggtcgac gtcggcgacc gagttcgggt ggtgatcgac aaccagcttc
     6241 cattgggaac tgacgtccac tggcacggga tctccacacc caacgacatg gacggcgtgg
     6301 ctcccctgac ccaagacctg atccagccgg gtacctcatt tacatatgag ttcactgccg
     6361 aggaaccccg aaccggcatg taccacgccc accacatggg ccacatggcg attcccaacg
     6421 ggttgttcgg tgttttcacc attggcgaac cgccagttcc ccgtgggaag acgatcgggg
     6481 gggtatccat tccagccgac ctcgagatct cgaggatcat cccgatggtt cttaacgacg
     6541 ctggggtcat cggctactca ctaaacggca agtccttccc ggcgactcag ccctacgtcg
     6601 tcaccgcagg agactggatt gtcgtcgact actacaacga ggggttgcag atccatccga
     6661 tgcacatgca ccagttcccc cagttggtat tcgccaagga cggattcccc ctcgatcacc
     6721 catactttgc cgacaccatc aatgtggcgc ctggcgagcg ctactcggta ctagtccgtc
     6781 ccgacgaacc cggcgcctgg gtgtggcact gtcacatcct caaccacgtg gaacgcgatg
     6841 acgggatgtt tggcatggtc accgcggtca tcgttgaagc tgcctgaccg aacctcccaa
     6901 cggataccac tcctcgacaa gatcaccgtc gacaggtagg aagatcatgt tcggctgcac
     6961 cgactagtag cgctaagacc gttcaggccg ccgacgttgc accggtgaga tcaacggctt
     7021 cgtcggactc cttgaccgcc gcgtcgaccc tgccaccgac caccagatcg aaggcctcgg
     7081 catcatcgct ctcctcgtct tcgccggcca cctgcctgag gccgtcggtg gctgacagaa
     7141 gcgccccgag agtctcgtcg agctcacggt cagcccgatc acagagaacg tccaacctct
     7201 ttcgggcctc caacagcacc tggtatcgat ggttcgccca tccggttttc tggtcgaccg
     7261 gttcgccatc agatgaagga gcttcggtcg ttccagtgaa ccccatcgtc cggtcatccg
     7321 ccgtcaagtt tgcggcgaac cggtcgtttg atgcggcgtg gaagtcgctg tccgccagac
     7381 gctcttcctc accggccacg atgcggtccc ggtggagatc ggcggcccgc tgacgggcct
     7441 cgtcgtagtc ccgggcgcgt gccaccacct gttcctcctg ggtctggtcc gacttcatct
     7501 cgggtgaact ggggatctgg gacatggggt tcctctgctg tctgggtggg tcctcgaggt
     7561 tcgcgcgcgc ggaccatcgc gcgcgcggac cctctgcttc tagtgtctgg ctgtgacaat
     7621 ggggcccacc gccgctgaac gagaggctct ggccaccggc tgggatccca accccgcccg
     7681 ctcgatgtca ctctcgacag atgcctacac cgatccacgt tggttcgatg tagaggtcga
     7741 gaccgtcttc tccaggacct ggcagtgggt gtgtcatgtc gaaaaggtcc gtgaccccgg
     7801 cacgtacacg accacaacga tcgccgatcg gtcggtcgtc gtggcccgcg acgtcgatca
     7861 cacccttagg gcgttttcca acgtctgcat gcaccgggcc cacgaactcc tgaccggcga
     7921 cggcaccgta aagcggatca cctgcccgta tcacgcctgg tcctacggcc tagacggcgg
     7981 cctcctcacc gccccccaca ccgaccacct agtcgacttc gacccggact ccatctgcct
     8041 cgatgcccta gccgtggagg agtttggcgg cttcgtctac gtgaacctcg actcggaggc
     8101 ccgggccctg gccgagcagg ccggtgatct ggctgccgag attgcccact gggcacccga
     8161 cgtggccgat ctcacccacg ctcatcgcct gacctacgag attgcgtcgg actggaagaa
     8221 cgtcatcgac aacttcctcg agtgctatca ctgtccggtc gcccaccggg acttctgcac
     8281 gctggtcaat atggatacct acgaggtgtc cacccacggg atctggtcca gccacatggc
     8341 tgaggctggg cgatccgaca acaccgccta cccggtcgac gatgccacgg ttaccgacca
     8401 cgccgtctgg tggctgtggc ccaccacgtg tctcatgcgt tacccgggac ggggcaactt
     8461 catcgtcatg aacgtcgtac ccgacggccc aggtcgcacc cgcgagacct acgacttctt
     8521 cttcgagacc gccgaggcga ccgaggccga gctggaggcc atcaggtaca tcgacgacgt
     8581 cctccaagcc gaggacatag cgctggtgga gagcgtgcag cggggcatga ccaccccagc
     8641 ttttacccag ggtcgcatcg tgcacgaccc ggcgggctcg gggaaatccg aacacggcgt
     8701 ccaccacttc cacggcctgc tactcgatgc ctaccgcagt gccggcaggt aaccgatgtc
     8761 ggccgacacc cggtccgtag gccagcagcc agtaccagtc cggcagcgtg aaaacgaaac
     8821 cgtcgtcaca ccgggcctcc cgtccgctcg tccccgaagg tgccgaccct aggctcccga
     8881 ccatgtcgcc aacccccgct gctcccgccg cacaacagtc cgaccttgac ttcgccatag
     8941 ccatcgcacg tgcggcaggg gctctgaccc tggaactctt ccgtcgcccc gacgtcgcgg
     9001 tggaaggcaa ggaagacggc accccggtca ccgcagccga ccgcggagcc gaacgtcttc
     9061 tcagggaacg gataggcgcc acgtaccccg acgacgccgt ggtcggtgaa gaggaatccg
     9121 acaccgacgg cacctcggga cgcacctggg tactcgaccc catcgacggc acccagtcgt
     9181 tcatccacgg tgtgcccctc tacgccaacc tcgtggccct tgaggacgag cacggcccag
     9241 tcgtgggggt gatcaacatc cccgcactcg acgaatgcgt ctgggctggc cggggactcg
     9301 gttgcttcgt gaacggcgaa ccgaccagcg tgtcggaccg cgaggacctc catggctcct
     9361 gcatcgttac cagtggcgtc gactattggc cgtcagccgc cgcactcgac gagttcgtcg
     9421 ggcgcaacgc ggtgatccgg acctggggtg atgcctacgg ctacgtgctg gtggccaccg
     9481 gtcgagcgca cgccatggtc gatccgatcg tgagccggtg ggacgtcgcc cccatgctga
     9541 ccatcctccc ggaggccggt ggcgtgttca ccgatctgtc gggtgccgtg actgccgaag
     9601 gtggggacgc cctggccacc aacctggcgc tcgcccccca gatcctcgaa ctggtcggcc
     9661 gctgaagacc agtacccaga gtggggcact cagaacaggc aaccagaacc gatgctcagg
     9721 aaagggcccg ctccccctcg aagatcgaag ccttaagatc ccgctccacc aggtccgaca
     9781 ggaatgccac cggttcgacc atctcggcca gaccggccat tccggccacg cggtggcgac
     9841 ccgccagcaa ccactccacc gtcgtggcag ccactgcggc ggcagccact gctggtcgct
     9901 cggtggctcc gagcacgacc acgtcgcttg cgtcatctcg ccgaccccgg acctcgaccc
     9961 gtacagcacc catcccgccc tccacgtgcg gcggagacag catgggtaat ggcgccgtca
    10021 ggcgatcccg gcgggtagcc gccacccggg cggtgatccg acccaccgtg ggcagtgcgt
    10081 ggtgcaacaa caccggatca ggaagagccg cccgatagca gtccctcggt cccaccggat
    10141 cgggaaacca cgccagttca cggcccgagc cacccgtccg gcgggtccag tcgcccgcgc
    10201 cggaaccatc gtccacccgc cagtcgtagg aacgtcgact gagtgcccga tggtggacca
    10261 acgcacacgc aggtccgccc gtgccaacct tcgccacgtg tacctcgtcg acttcgtcga
    10321 accacgaggc gccatgggcc gccaggacac aggacatacc tggtccgaag ccgctgccca
    10381 ccgcgatcgg cacgccggca cgggctgcgt cgcccgaccg ccgaagcacc gcgatcgtct
    10441 cggctaggcc gtcaccaacc agtaccgctg gccgacgggc cgcaatggtc tcgatcaccg
    10501 cctcgagatg ggtccccctt ggcgttgcca ccacgaccac atcggcctcc agcgagtcgg
    10561 agaacggatg gtgttcgacc cgacaccggt caccgaggga tcgtgaggct cgagccaggc
    10621 gttcagccga gatgtctcgc agcaagacct gctcgaccgc atcggaggac aggagttgac
    10681 gggccacccg ggcgccgacc gctccggccc cgaggaccgc tacccggttc atgaaaagcg
    10741 tctcatggga ggtggttcac cggaggtgtg gcccagccag gggtcgccat ccgccggagc
    10801 ggcgcgcgat cccgtcagct ccgttaatgc ggagggcggc ggccaccgcg gcggcgacgc
    10861 tcaccgcggc gagggctcgt cggatgaact gcatgaacgt ggggctagct ggaatcgaac
    10921 cagcgacctc acccttatca ggggtgcgct ctaaccgact gagctatagc cccgcagacc
    10981 ccggaacggt atcggcgccg acgaaggcgt cactactctc ccggaccgcc ctcggtttgc
    11041 caaccagtgc cggtcacggg ggtctcgacg acgacatcac cacgccgcaa cttcctctgt
    11101 cgaaccgcgg tttcctcttc caccatggtg aagcggattc ccccggtcag atcgctgatg
    11161 aggttgaaga gcaccacaag gaccacggtg acaccgatac cgccgaccac gaggaccagg
    11221 ccacccagca cgaagatccg gaagatctgt gccgagtcga aggtgaagga ttcgagggcg
    11281 aatagttcct cgatgaacga ttcgaccttg ccgatggttc ccgcctcgtc agccgcgctc
    11341 cacagcatgc gggtagcgat gaccagaaga ccccagacgc acaggtagaa caccagacag
    11401 accttcagaa ccgaccacgg ctcgatgtga cggaccaaac ggcgaacccg tcgcacccga
    11461 tacccaccgg tcggagcacc tgaagcccgt tcgacgaccg ggagggcctc tgcccgtgcc
    11521 cgaccgaacc agcccttcag gacacgtgga cgttcccgtc gaaagactgg tgacacgtcg
    11581 aggtcgtcgt catcgaggtc cccaccagac atcttcgcca acaggtcgcc tgacgactgc
    11641 tgcgccgtca atgcgacgtc gttctcggtt cttgcgtcag cttcaatgtc gccttcagga
    11701 tcgaccaaat cgcccagctc ctcaggcagg tccacgacga gatcatcagt cgactcctcc
    11761 ccaagatccg cgaagagttc cccagagcgc gcggctgggc gcggctcact ggaatcatcg
    11821 atgtcgtcgg gggccacggg ccggaagtct acgggtccga tcccggtcca gccggacggg
    11881 ccggcgactg ggccgttgcc caggcacgaa ccacccgggg gtcagttcta ttcgacgggc
    11941 acctctggca gcccgtcagc caactcttcg gtgaactcct cgtcgggttc gccggccggt
    12001 acgggcgaca ccgcagcgac ttcctggcca tcgccggggg acatgacccg aaccccggtt
    12061 gcatcccgac cctggaccga aatgtcggtc gcgggcatgc ggatgatcat tccagccgtc
    12121 gtgatggcga acaggtcctc gtcctcggtc agcaccagcg caccagccac tcgtccccga
    12181 tcatcggtcg tccggatacc ccgtacacca agaccagcac ggcccttgac cgtgaactcg
    12241 tccaactcgg tccgcttgcc atagccctcg gtggtcagat ggaggatcgt ggcgtcggca
    12301 cgggccacgc aacacgacac cagaacgtcc tcgtcccgga atttcatgcc cctcaccccg
    12361 gccacgctcc gccccatggg ccgcacgtcg tcctcggaga tccgcagggt ctggccagag
    12421 ctcgagacaa ggaacaggtc gtcgtccccg ttggtgggca ccacggccac cagctcgtcg
    12481 ccgtcgttga ggcgcacggc gatcagaccg gccttcaacg acgaatcgta ggccgtgaac
    12541 agggtcttct tcacccgtcc gctccgcatg gcgaagaaca ggaagcggtt cgactcgtag
    12601 tcccgggtgt cgatgacggc ctggatccgc tcgtcgggct gcaacgggag caggttcacg
    12661 atcgatgtcc cgcgggctgt acgaccagcc gacggaatct cgtgagcttt gagccggtat
    12721 acccggcccc tggtggagaa gaacaacagg taggcatgag cggtggtgtg gatgaggtga
    12781 gccaccgcat cctcgtcctt gagctttgct cctgtgacgc ccttgcctcc gcgcccctgg
    12841 gtccgaaact caccgattga catcgtcttg acgtaacccg aggtgctcat ggcgaacacc
    12901 atctcctcgt cgtcgatcag gtcctcgatg tcgagttcgc ctggatcgtg gaccatctcg
    12961 ctgcgccgcg gggtggcatg tctggcccgc acctcgccca actcgtcctt gataacgctg
    13021 cgaaggcgtt cttcgtctcc gaggatggcc tccaactcag cgatcgtcgc ctggagctcg
    13081 accatcctct cctcgaggtt ggtccgtcca agacgggtca ggcgggccag ctgcatgtcc
    13141 aagatgtggt ttgcctggac ctcgctgaac tcgaagtcat cacccatcag accttcacgc
    13201 gccgtagccc gatccgccga cccccggatc agggcgatga tgtcatcgat caggtcgagt
    13261 gccttcagga ggccttcggt tatgtgggcc tcatcgcgtg ccttggccaa ccgaaactcg
    13321 ctgcggcgac gtaccacttc gacctggtgg tcgacgtagg ccaccagcag ttcacgcagg
    13381 ttcagagtgc ggggcacctc gtcgacaagg gccaccgtgt tgaccgaaaa cgtggtctgc
    13441 agcggcgtcc gcttgaacaa gttgttaagg atgaccagcg ccggggcgtc ccgcttgagc
    13501 gtgatcacga ttcgggttct tccctgcgcc gactcgtcgt tgatgtcggc aatgccctca
    13561 atctctcgag catccaccaa gtcacggatc ttggacatga tcaggttggg gctggactgg
    13621 tacggcaact cggagaccac gatccggctc gaccgctggc cctcttcgat gtcggtgcgg
    13681 gcccgcatcc gtacctgtcc gcggccggtc cggtaggcct cgcggatacc ggaccgcccc
    13741 aggatcaggg ccccggttgg gaagtccggt gcaggcaagt gttccatcag gtcatccggc
    13801 gtggcgtccg gatggtcgat gaggtggatc gtggcatcga tcacctcacc cagattgtgg
    13861 gtcggaatgt tggtcgccat gcctaccgca atgccctggc tgccgtttac cagaaggttc
    13921 ggaaagcggg ccggaaggac caccggctcg gtgaattcac ccgagtagtt ctccgtgaaa
    13981 tcaacggtgt cctcgtcgat cccggccagg aggtccaggg cgatcggatc gaggcgacat
    14041 tcggtgtaac gggccgcggc ggccgcgtcg tccggcgaat agccgaagtt tcccttcggg
    14101 tgcacgaccg ggtgacgcag gctgaagttc tgtcccatgc gaaccagggc gtcgtagatg
    14161 gctagatccc catgggggtg gtacttaccc atgacttcgc cggtgacgcg ggcgcacttc
    14221 atggtcggcc gatccggccg ggctccaagg tcgtacatgc cccagaggat tcgtcggtgc
    14281 accggcttga gaccgtcccg tgcgtcggga agagcccgcg acacgatgac cgacatggcg
    14341 tagtccaaga aggactgctc catctcctcc tggatctcga tgggctggat gaatcccagc
    14401 gtcggtgcct cgtcacccgg agcagccacg tctgtcgtcg ggacgtccgt ctcgtcagcc
    14461 actagatgtc caagaaccgg acatcgcggg cattggtctg gatgaagcgc ttacggctct
    14521 ccacgtcctc gcccatgagc gtcgagaaga cctcgtcggc aatggccagc atctcgacgg
    14581 tcacctgcag aagactccga cgggacggat ccatggtggt ctccttgagt tcgtcgaagt
    14641 ccatctcgcc aaggcccttg agacgttgga actcccgctt gtggctggga ttctcgacca
    14701 agaacgcctc cttggcgtgg tcgtccttca ggtagacctt ctcgcgcccc accaccgtgg
    14761 aatacagcgg aggttgggcg atgtagacgt gtccggcctc gaccatcggc cgcatctgac
    14821 ggaaaaagaa ggtcagtaga agcgtgcgga tgtggctgcc gtctacgtcc gcgtcacaca
    14881 gcaggatcac cttgtggtag cggatgcgac cgacgtcgaa gtcgtcgccg aagccgctac
    14941 caatagcctg gatcagcgtt tggatctcgt tgttcttgag catccggtca gcacgggcac
    15001 gctcgacatt gaggatcttt ccccggatgg gaagaatggc catggtgcgg gggtcgcgtg
    15061 cctgtaccgc tgaaccgcca gccgaatcgc cctccacgat gaaaagttcg gattcccgcg
    15121 gatctttgga tgcacagtcc ttgagcttgt cgggcatgcc ggcgccgtcc aacgccgact
    15181 tccggcgggc tgacttgcgt gcatcctgag cggctacccg agcccgctgg gcgttgattg
    15241 ccttctggac aattgccttg gcttccgggg ggtgttcctc cagccagtcg gccaaccggt
    15301 cattggtggt ccgttgcacc agcgatcgca tttcgacgtt tcccagcttg gacttggtct
    15361 gaccctcgaa ctgcggatcg gacaggcggg cgctgatgat ggcggtcagc ccctcgcgaa
    15421 tgtcctcgcc ttggaggttg tcgtcgttgt ccttgaggag gtttctcttc ttggcatagc
    15481 ggttcatcac cgcggtcagt gcgctacgaa atccctcctc gtgcatcccc ccctcgaggg
    15541 tgttgatgcc gttggcgaag gagtggagac catcggagtt gaagccggta ttccactgga
    15601 aggccacctc gacctcctgc ccgtcctcga tgccttcgat gtagccgacc tcggaaaaca
    15661 aggactcctt ggaggcattc acgtgggcca cgaagtcgcg gatgcccccc tcgtactggt
    15721 agtccacctc accacggttc tcgtccgtcc gttcgtctcg caatcgaatc cgtagacccc
    15781 ggttcaggaa cgccatcatc tggaagcgct cagacaaggt ttggaaacgg aatcgagtct
    15841 cgtcaaagat cgattcgtcc ggccagaagc gaacggtggt gccggtcctt ccatcgggtg
    15901 aatcgccgct caccgccaga cgggtctcca gtcgaccgcc ttccacgaaa tccatgtagt
    15961 gccgactgcc atcacgatca atctccacct cgaccctgga cgacaacgca ttgaccaccg
    16021 agatgccgac gccgtggagc ccgccggaca ccttgtatcc ctcgcccccg aacttgcctc
    16081 cggcgtggag caccgtgagc acgacctcgg cggccgtgag ctcttcatac tggtggtgga
    16141 ggccgacggg aattccccga ccatcatctg aaacctcaca cgacccgtcc tcgctgaggg
    16201 tcacctcga
//
LOCUS       DASCMR010000278         2871 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001360322, whole genome shotgun sequence.
ACCESSION   DASCMR010000278 DASCMR010000000
VERSION     DASCMR010000278.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2871)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2871)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2871
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001360322"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..695)
                     /locus_tag="QGG16_06600"
     CDS             complement(<1..695)
                     /locus_tag="QGG16_06600"
                     /inference="COORDINATES: protein motif:HMM:NF014458.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HJP24976.1"
                     /translation="MIDIRLLRSDPEAVKAALARRGEDTSGLDQIIELDARQRALAEE
                     RDQVRNEVNTISKEVGGLHRDGKAAEAVELQARSRDLGDREDTLASEVDMLADEIRDA
                     LLRVPNLPSADAPDGLTEANNVLVRHEHWDPDAYGEHQRVPHWEIAEQLGLLDVERGT
                     KLSGSMFVMYTGMGATLCRALIQYGLDRNADAYREMRPPTLVKTETMVSTGHLPKFEE
                     DAYHLERDDLWAIP"
     gene            complement(726..1598)
                     /locus_tag="QGG16_06605"
     CDS             complement(726..1598)
                     /locus_tag="QGG16_06605"
                     /inference="COORDINATES: protein motif:HMM:NF021214.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HJP24977.1"
                     /translation="MTALLAATPDPWRWQAHPEVWFLVVAVVALGWWATRVIGPRVVP
                     VGQPISTPFQRRAFVAATVLLLVSADWPVHDIAEAHLYAVHMVQHMFITFIVPPLFLL
                     AMPAWLARLLVLEGGRGSRILRRLAHPVVAGVLFNALTALTHWSGVVQWSFDSGAFHY
                     SVHLLLFVAALLMWVPVVAPLPELRISVPGQMIYLFLMSVIPTIPAAWLTFAEGTVYK
                     HYDDGFEAFGVTVTSDQQAAGLIMKLLGGFYLWGIIIVKFIGYSRVHHQENQQMRPAE
                     GRHRRLHSDEEPVE"
     gene            complement(1657..1995)
                     /locus_tag="QGG16_06610"
     CDS             complement(1657..1995)
                     /locus_tag="QGG16_06610"
                     /inference="COORDINATES: protein motif:HMM:TIGR02229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C oxidase subunit IV family protein"
                     /protein_id="HJP24978.1"
                     /translation="MSTATESPVESHEAAHEEDHDHPSDRRYIQVAAILAIVTALEVA
                     TYFVEMPGEVLIPMLMAMMIYKFFYVAAWFMHLRFDSPLFTKFFVAGLVLATIVYGIT
                     LTVFEFWHKG"
     gene            complement(2012..2617)
                     /locus_tag="QGG16_06615"
     CDS             complement(2012..2617)
                     /locus_tag="QGG16_06615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-copper oxidase subunit III"
                     /protein_id="HJP24979.1"
                     /translation="MADSAAVSHGHATGTGLSNNKLLMWVFLGSECLLFGGLISTYLI
                     YRSRYASGPAPGDIFDIPFTSVSSFVLLMSSLTMVLALSALQRGDIRNNRIWLLTTAL
                     LGSLFIGGQVYEFTTFVREGLGYTTSPFSSAFFTLTGFHGVHVSLGILMLMSLLISSL
                     RGTLTKERSETVEIVGLYWHFVDVVWIFIFTVIYLVPSPTS"
     gene            complement(2610..>2871)
                     /locus_tag="QGG16_06620"
     CDS             complement(2610..>2871)
                     /locus_tag="QGG16_06620"
                     /inference="COORDINATES: protein motif:HMM:NF023691.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 4"
                     /protein_id="HJP24980.1"
                     /translation="SPSYWPLVMATGMPFIGFGLIYSLWFCVPGAILILMAIYGWIFE
                     PVDDPDGPHGHGHHDDGDDHDGVADEESDEATTETAQEAPVG"
BASE COUNT          596 a          898 c          926 g          451 t
ORIGIN      
        1 ggaatggccc ataggtcgtc ccgttcgagg tggtaggcgt cctcttcgaa cttgggaagg
       61 tgcccggtgg acaccatggt ctcggtcttg acaagcgttg gcggacgcat ctcccggtaa
      121 gcatccgcgt tgcggtccag gccgtactgg atcaacgccc ggcacagggt ggcgcccatg
      181 cctgtgtaca tgacgaacat cgagccggag agcttggtgc cccgttccac gtccaggagt
      241 ccgagctgtt cggcgatctc ccagtggggc acccgctggt gctcgccgta ggcatcggga
      301 tcccagtgct cgtggcggac cagcacgttg ttggcctcgg tcaggccatc gggagcgtca
      361 gcggagggaa ggttcggcac gcgcagcagg gcgtcgcgga tctcgtcggc cagcatgtcg
      421 acttcactag ccagggtgtc ctcgcgatca cccaagtcac ggctccgagc ctgcaactcg
      481 acagcctcgg cagccttacc atcgcggtgg agaccaccga cctccttgga gatggtgttc
      541 acctcgttac ggacctgatc ccgttcctcg gcgagggccc gctgcctggc gtccaactcg
      601 atgatctgat cgagaccgga ggtgtcctca ccccgacggg ccagggcggc cttcacggcc
      661 tcgggatctg aacgcagcag ccggatgtcg atcacgggtg cgaacctagc gggagggccg
      721 tggccctact cgaccggttc ctcgtcggag tgcagccgac ggtggcgtcc ctccgccggt
      781 cgcatctgct ggttctcctg gtggtgaaca cgcgaatagc cgatgaactt tacgatgatg
      841 atcccccaca ggtagaagcc acccagcagc ttcatgatga gccccgccgc ctgctggtcc
      901 gatgtcaccg tcaccccgaa cgcctcaaag ccgtcgtcat agtgcttgta gaccgtgcct
      961 tcggcgaagg tcagccacgc cgccggaatg gtcgggatga ccgacatcag gaacaggtag
     1021 atcatctgac ccggcaccga gatcctcaac tcgggcaggg gcgccaccac cggaacccac
     1081 atcagcagtg ccgcgacaaa cagcagcaga tggaccgaat agtggaaggc cccggagtcg
     1141 aacgaccact gcaccacacc actccagtgg gtgagcgccg tcagggcgtt gaacagcacg
     1201 ccggccacca ctgggtgggc caggcgacgc aggattctcg acccgcggcc accctcgagc
     1261 accaggaggc gagccagcca cgccggcatg gccagcagga acaacggcgg cacgatgaag
     1321 gtgatgaaca tgtgttggac catgtgcacc gcatagaggt gtgcctcggc gatgtcgtgc
     1381 accggccagt cggccgaaac cagcagcagc acggtggccg ccacgaaggc ccgccgctgg
     1441 aacggggtgc tgatcggttg accaaccggg acgacccggg ggccaatcac ccgggtggcc
     1501 caccagccca gggccacgac ggcaacgacc aggaaccaga cctcggggtg ggcctgccat
     1561 cgccagggat cgggagtggc tgccagtaga gccgtcacgg gatcaggacc agttcacggt
     1621 ccgggtgggg tcgccgcccc tgggcaacga gacgcctcag cccttgtgcc agaactcgaa
     1681 gacggtgagg gtgatgccgt agacgatggt cgccagcacc aggcccgcta cgaagaactt
     1741 cgtgaacaac gggctgtcaa agcgaaggtg catgaaccag gcggccacgt agaagaactt
     1801 gtagatcatc atcgccatca gcatggggat aaggacctcg ccgggcatct ccacgaagta
     1861 ggtggccacc tcgagggccg tgacgatggc caggatcgct gcgacctgga tgtaccgacg
     1921 atctgacggg tggtcgtgat cctcctcatg tgctgcctcg tgggactcca cgggtgactc
     1981 ggtggcggtg ctcatggtga tgactcccgg atcagctggt gggtgagggc accaggtaga
     2041 taacggtgaa gatgaagatc cacaccacgt cgacgaagtg ccagtagagg ccgacgatct
     2101 cgacggtctc ggaccgctcc ttggtcagcg ttcctcgcag cgaggagatg agcagcgaca
     2161 tcagcatcaa gatgcccaga ctcacgtgca cgccgtggaa cccggtcagg gtgaagaagg
     2221 ctgacgagaa ggggctggtc gtgtagccca gaccctcccg aacgaacgtc gtgaactcgt
     2281 agacctgccc gccgatgaac agtgaaccca acagggcggt ggtgagcaac cagatccgat
     2341 tgttgcggat gtcgccccgc tgcaacgctg agagcgccag caccatggtc agcgaactca
     2401 tcagcagcac gaacgaactg accgacgtaa agggaatgtc gaagatgtca cccggtgccg
     2461 ggcccgaggc ataccgactg cgatagatca gataggtcga gatcaagcca ccgaacaaca
     2521 ggcattctga acccaggaac acccacatca gaagcttgtt gttagacagg ccagtacccg
     2581 tcgcgtggcc gtgcgacacg gcagcggagt cagccaacgg gggcctcctg agcagtctcg
     2641 gtggtcgcct cgtcagattc ctcgtcggcg accccatcgt ggtcgtcacc gtcgtcgtgg
     2701 tgaccgtggc cgtgaggccc gtccgggtca tcaaccggct cgaaaatcca tccgtagatg
     2761 gccatcagga tcaagatggc acccggtacg cagaaccaga gcgagtagat gaggccgaac
     2821 ccgatgaacg gcatcccagt agccataaca agcggccagt acgagggcga c
//
LOCUS       DASCMR010000279         1678 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001364494, whole genome shotgun sequence.
ACCESSION   DASCMR010000279 DASCMR010000000
VERSION     DASCMR010000279.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1678)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1678)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1678
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001364494"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(118..606)
                     /locus_tag="QGG16_06625"
     CDS             complement(118..606)
                     /locus_tag="QGG16_06625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system NifU family Fe-S cluster assembly
                     protein"
                     /protein_id="HJP24981.1"
                     /translation="MAGLEDLYREIILDHYRSPRNRGELEVPPATMAEGFNPLCGDEI
                     RVYLEVDDGVISDMRIGGQGCSISQSSASMMSTAVIGKSIDEARDMLRQFKEMMSIHE
                     HGLDGDNGDRAGDNTADQPGASGLGDLEALRGVVKFPVRIKCATLGWNTFDQALTESS
                     SE"
     gene            complement(688..>1678)
                     /locus_tag="QGG16_06630"
     CDS             complement(688..>1678)
                     /locus_tag="QGG16_06630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HJP24982.1"
                     /translation="APSAEEIVFTKNATEAINLVAYSWGRANLVEGDVILLTALEHHA
                     NIVPWQQLATERSLDIRWIPVDDDGRLDLADLDVLLDDVKLLAVTAASNVTGALPPIR
                     HLADAAHALGATVLVDASQWVPHLPTDVTAWDADFVAVTGHKMCGPTGIGALWGRQEL
                     LDAMPPFLGGGSMIQNVTFEGFTPADVPARFEAGTQPIAEIVGWNAAIDFLEGLGMEA
                     VAAHERNLTAYALRTLTERFGDDLIIHGPSTVEERGGTLSLAYRNIHPHDLSQVLDQH
                     GVCVRAGHHCAKPLMKVLGVNATARASLYLYNDESDVDALADAMAYASDFFAL"
BASE COUNT          278 a          505 c          582 g          313 t
ORIGIN      
        1 gccagcccga cgatccagac cggcgtgtgt ttcggacgcc cgtcgctcgt ccaggtggtg
       61 aggcggacgt aacgctcgtt aggcaggtcg ccgttcaacg agcgcctgac ctggtggtca
      121 ctcgctggag gattcagtga gtgcttggtc aaaggtattc cagccgaggg tggcgcactt
      181 gatgcgaacc gggaacttca ccacgccccg cagggcctcc aggtcgccga gaccggaagc
      241 gcccggctga tccgcagtgt tatcaccggc gcgatcgccg ttgtcgccat ccagcccgtg
      301 ctcgtggatc gacatcatct ccttgaactg ccgcagcatg tcgcgggcct cgtcaatcga
      361 ctttccgatc accgctgtgg acatcatcga cgctgacgac tggctgatcg aacagccctg
      421 tccgccgatt cgcatgtcgc tgattacccc gtcgtcgacc tcgaggtaca cccggatctc
      481 gtcgccgcac agcgggttga agccctcggc catggtggcc ggcggcacct cgagctcgcc
      541 acggttccgg ggactccggt agtggtcgag gatgatctcg cggtagaggt cttcgagtcc
      601 ggccatggtg taggtgctcc tggggcggct ggtcaatcga tgggaatgcg gcggatgctg
      661 cgtctggcag cgggtccaga aatcgggtca gagggcgaag aagtcgctgg cgtaggccat
      721 tgcatcggcc agcgcgtcga catcagattc atcgttgtag aggtaaagcg aggcacgggc
      781 cgtggcgttg acgcccaaca ccttcatgag gggcttggcg cagtggtggc cggcccgcac
      841 acagacgccg tgttggtcga gtacctggct gagatcgtgc gggtggatgt tccggtaggc
      901 cagcgacagg gtgccgcccc gttcctcgac ggtgctcgga ccgtggataa ttaggtcgtc
      961 gccgaaccgt tcggtgaggg tacgaagggc gtaggccgtg aggttccgct cgtgggcggc
     1021 cacggcctcc atgccgaggc cctcgagaaa atcaattgcc gcgttccagc cgacgatctc
     1081 ggcaatgggc tgggtgcctg cctcgaagcg ggcgggaacg tcggccgggg tgaatccttc
     1141 gaaggtgacg ttctggatca tcgacccgcc gcctaggaac ggtggcatgg catcgagcag
     1201 ctcctgacgg ccccacagcg cgccgatgcc cgtcgggcca cacattttgt ggccggtgac
     1261 agccacgaag tcggcgtccc aggcggttac atcggtcggc aggtggggga cccactggct
     1321 ggcgtcgacc agcacggtgg cgcccaaggc gtgggctgcg tcggccagat ggcggatcgg
     1381 aggcagtgca ccggtcacgt tggatgccgc ggtgacggcc aacagtttca cgtcgtctaa
     1441 cagaacgtct agatcggcca ggtcgaggcg tccgtcgtcg tcgaccggga tccaacggat
     1501 gtccaggctc cgctcggtgg ccaactgttg ccacgggaca atgttggcgt ggtgctcaag
     1561 cgcggttagg aggatgacgt cgccttccac caggttggcc cgaccccatg agtaggcgac
     1621 caggttgatg gcctcggtgg cgttcttggt gaacacgatc tcttctgccg aaggtgcg
//
LOCUS       DASCMR010000280         5977 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001365650, whole genome shotgun sequence.
ACCESSION   DASCMR010000280 DASCMR010000000
VERSION     DASCMR010000280.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5977)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5977)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5977
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001365650"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..246
                     /locus_tag="QGG16_06635"
     CDS             <1..246
                     /locus_tag="QGG16_06635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24983.1"
                     /translation="TTTTTTTTAAPTTTAAPTTTAGPTTTAAPTTTVPPPSTTAGMFG
                     GLGANLVAQLLGQPCIADGDLSDCGPEVDALVKGLVE"
     gene            317..3667
                     /locus_tag="QGG16_06640"
     CDS             317..3667
                     /locus_tag="QGG16_06640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="error-prone DNA polymerase"
                     /protein_id="HJP24984.1"
                     /translation="MDWSNSGMPWRELEGCLSDRPFAPAPRWTPPPAPTGPRSPVGPS
                     SSVDQTPKGETGPPYAELHCHSHFSFLDGASSPDELVAEAVRLGLSALALTDHDGFYG
                     VVRFAEAARTHGLPTVFGSELSLDVPSTNGSATRSARTGTPDPAATHLVVLAANPIGY
                     ARLGTAIAESQLAGEKGRPRLSSDRLAELAGADPHWTVLTGCRKGAVPAALEADGPAA
                     ARRALDDLVDRFGRDQVVVELWDHGHPLDVERNDALADLATAAGVGLVATNNVHYHRP
                     ARRRLATTMAAIRARQPLEELDGWLPAAGTAHLRSGAEQAHRFARWPGVVAAADELGR
                     RCAFDLGLVAPGLPPYPCPDGLDEMGLLRRLATAGATDRYGPRDAERVVGAWTQVDRE
                     LGIIGELGFPGYFLVVHDIVSFCHRSDIYCQGRGSAANSAVCYALGITNADAVGLGLL
                     FERFLSPEREGPPDIDLDIESGRREEVIQYVYDRYGRQHAAQVANVITYRPRSAVRDV
                     ARALGYDPGQQDAFAKGLDRRARIQPTPGKETDSGETGLPDDVAILADELSDVPRHLG
                     IHSGGMVVCDRPMAEVCPVEWGRMVDRSVLQWDKDDCAAVGLVKFDLLGLGMLSALHH
                     TVDLVAAHQGIEVDLARLPQDGDVYDMICAADTIGVFQIESRAQMATLPRLRPRHFYD
                     LVVEIALIRPGPIQGGSVHPYIRRRNGREPVTYLHPLCENALSKTLGIPLFQEQLMQL
                     AIDVAGFTATEADRLRQAMGSKRSHDRMEALHHRFLAGAGGRGVVADVAEQVWQKLAA
                     FADYGFPESHAVSFAHLVYASCWLKYHHPAAFCAGLLNAQPMGFYSPHSLVQDARRHG
                     VQVRTPDLNRSGARALLEGASLEGSGSEEAGGPALRMGFGSVRAIGRDLAEAIAAGQP
                     YDSIEDLQRRIDPGRPAMEALATAGAFACFDAGRREALWTAGALAATGPDRLAGVVTG
                     TVPPPLPAMAEPEQARADLWATGVSPDGHPTRFMRDELSADGVITAVDLRAVADGARV
                     RVAGVVTHRQRPHTAGGVTFVNLEDETGLINVIVSPGCWVRYRDVVTASALVVRGRVE
                     AVEGVVNVVAERIETLGVRLPARSRDFR"
     gene            complement(3794..5485)
                     /locus_tag="QGG16_06645"
     CDS             complement(3794..5485)
                     /locus_tag="QGG16_06645"
                     /inference="COORDINATES: protein motif:HMM:NF019581.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJP24985.1"
                     /translation="MAYDLIIRGGTVVDGTGAPPVTADVAVDSDRIAEVGRVEGRARR
                     EIDADGLVVTPGFVDIHTHLDAQMAWDPLGTSASWHGVTSVVLGNCGVTFAPVAPGGK
                     EMLAEMMESVEDIPASSILEGLSWNWETYGDYLDELDRLPKGLNVGGMVGHCAVRLAA
                     MGERAMDETPAAAEDIEVMATMVDQALASGALGFSTSRTLLHTVPDGRYVPGTKASAD
                     ELMAFADVLRHRGGIFEVAPAYVDIGNGSEDPVQDEVGLYADISRAGDCDVSMALTQV
                     DAAPDLHRNVLAAVDRENAAGARLRPQTTSRQIGILFGLDGRTPFDRWGSWQSLADLP
                     LGERVARLRDPVSRATLLADAERSVSDNRIDWNRIYPLSDRPVRHVFTPEDSVAAIAS
                     QRQMSVAEAILDLLVEMDGRRVLTWPILNQDLDEVLGMLSHPHVTLGLADAGAHATLI
                     MDASQPTFFLTHWMRDEGRFTLEDAVRRLTSEPADLFGVSDRGRLVAGGFADINVIDL
                     EGLALGYPEMAHDFPGGAPRWIQGANGYRQTLVNGEVFLQSGQHTGVLAGRTVRL"
     gene            5676..>5977
                     /locus_tag="QGG16_06650"
     CDS             5676..>5977
                     /locus_tag="QGG16_06650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016702 - oxidoreductase activity, acting
                     on single donors with incorporation of molecular oxygen,
                     incorporation of two atoms of oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carotenoid oxygenase family protein"
                     /protein_id="HJP24986.1"
                     /translation="MVGDNPYLEGALAPVLDEVLALDLPVTGTLPEELEGRWLRNGPN
                     PLGPTDPATHHWFLGDGMVHGVRLCGGRAEWYRNRWVRGPRVAEALGEPRPAGTSFV"
BASE COUNT          932 a         2004 c         2032 g         1009 t
ORIGIN      
        1 accacgacca ccaccacgac cacggcagcg ccgacgacta cggcggctcc caccaccaca
       61 gcagggccga cgactacggc ggctcccacc accacggtgc cgccgcccag caccactgcg
      121 gggatgtttg gtggcctagg tgccaatctg gtggcccaac ttctgggcca gccgtgcatc
      181 gccgacggtg acctgagtga ctgtggcccg gaggtcgatg ccctagtcaa ggggctcgtc
      241 gagtagatcc actgtcctcc gaggacggcc ccatcagtca gttgagtatc gaacaagtgt
      301 tcgatactgt tcgaacatgg actggtccaa ctccgggatg ccgtggcgag agttggaagg
      361 ttgcctatcg gatcgcccct tcgctccggc ccctcgttgg acgcccccac cggcgcctac
      421 cggaccacgg tctcccgtcg gcccctcctc ttctgtcgac cagactccga agggcgaaac
      481 gggccctccc tacgcggaac ttcactgcca ctcccacttc agcttcctcg atggggcctc
      541 gtcacccgac gagttggtag ccgaggcggt acgcctcggg ctaagtgccc tggcgctcac
      601 cgaccacgac ggcttctatg gggtagtgcg gttcgccgag gccgcccgga cccatggcct
      661 gcccactgtc ttcggcagtg agctttccct cgacgtgccc tccaccaacg ggtcggccac
      721 gcggtcggct cggaccggga cgcctgaccc ggcggccacc catcttgtcg tcctggctgc
      781 caatccaatc ggctacgccc ggctgggaac ggccattgcc gagtcccaac tggccgggga
      841 gaagggtcga ccccgactct cgtcggaccg tctggccgaa ctggccggcg ctgatcccca
      901 ctggacagtg ctcactggtt gccgcaaggg agctgttccc gcagcgttgg aggccgacgg
      961 tccggcggcg gcccgtcggg cactggacga cctggtggac cggttcggcc gtgatcaggt
     1021 ggtggtcgaa ctctgggacc acgggcaccc actggacgtc gagcgcaatg atgccctggc
     1081 cgatctagcc accgctgctg gagtgggtct ggtggccacc aacaacgtcc actaccaccg
     1141 gccggcccgc cgccgactgg ctaccacgat ggccgctata cgggcccgac agccgctgga
     1201 agaactagat gggtggcttc cggcggccgg cacggcccac cttcgttcgg gggccgagca
     1261 ggcccaccgc ttcgcccgat ggccgggcgt ggtggccgcc gccgacgagt tagggcgccg
     1321 ctgcgccttc gacctcgggc tggtggctcc cggtctgccg ccgtatccgt gtcccgacgg
     1381 gctcgacgag atgggcctcc tccgacggct ggccaccgcc ggagccactg accgatacgg
     1441 gccccgcgac gccgaacggg tggtcggggc gtggacccag gttgaccggg agttgggcat
     1501 catcggcgag ttgggtttcc cgggctactt cctcgtcgtg cacgacatcg tgtccttctg
     1561 tcaccggtcc gacatctact gccagggccg gggatcggcg gccaactccg ctgtctgtta
     1621 tgcgctgggt atcaccaacg ccgatgccgt gggtctaggc ctgctgttcg aacgctttct
     1681 ctctccggaa cgcgagggcc cgccggacat agacctggac atcgagagcg gtcgacgcga
     1741 ggaagtcatc cagtacgtct acgaccgcta cggccggcag cacgccgccc aagtggccaa
     1801 cgtcattacc taccggcccc gatcagcggt gcgtgacgta gcccgggcgc tgggctacga
     1861 ccccggccag caggatgcct tcgccaaggg tctggatcgt cgggcccgga tccaacccac
     1921 ccccggaaag gagacggatt ccggggagac gggcctgccg gacgacgtgg ccatcctggc
     1981 cgatgaacta agcgacgtcc cccgccacct cggtatccat tcggggggca tggtggtctg
     2041 cgaccgcccc atggccgagg tgtgcccggt ggagtggggg cgcatggtgg accgcagcgt
     2101 gctccagtgg gacaaggacg actgtgcggc ggttggtctt gtcaagttcg acctcctggg
     2161 gctggggatg ctcagcgccc tgcaccacac ggtggacctg gtggccgccc accaggggat
     2221 cgaggtcgac ctggcccgcc tgcctcagga cggcgatgtc tacgacatga tctgtgccgc
     2281 ggacaccatt ggcgtgttcc agatcgagag ccgggcccag atggccaccc tgccccggtt
     2341 gcgtccccgt cacttctacg acctggtggt ggagatcgcc ctgattcggc cgggcccgat
     2401 ccagggaggg tcggtgcacc cctacatccg gcgacggaat ggccgtgagc cggtcaccta
     2461 cctgcatccc ctgtgcgaga acgccctctc caagaccctg ggcatcccgc tgttccaaga
     2521 gcagctcatg cagctggcca tcgacgtggc cggcttcacg gctaccgagg ctgaccgcct
     2581 ccgccaggcc atgggatcca agcgaagcca cgatcggatg gaggccctcc accatcggtt
     2641 cctggccggg gcgggtggcc ggggggtggt ggccgacgtg gccgaacagg tctggcagaa
     2701 gttggctgcc ttcgccgact acgggttccc agagagtcac gccgtgtcgt tcgcccacct
     2761 ggtctatgcc agttgctggt tgaagtacca ccacccggcg gctttctgcg ccgggctcct
     2821 gaacgcccag cccatgggct tctactcgcc gcactccctg gtccaggacg cccgccgcca
     2881 cggggtccag gtccggaccc ccgacctaaa ccggtccgga gcacgtgccc tactggaagg
     2941 ggcatcgttg gagggctccg ggtcggagga ggccgggggt ccggcgctgc ggatggggtt
     3001 cgggtcggtt cgtgctatcg gaagggacct ggccgaggcc atcgccgcgg gtcagcccta
     3061 tgactcgatc gaggatctcc agcggcggat cgacccaggg cgaccggcta tggaggcact
     3121 ggccaccgcc ggtgctttcg cctgtttcga tgcgggacga cgagaggctc tgtggacggc
     3181 aggcgccctg gcggccacag ggccggaccg cctggccggg gtggtcaccg gcaccgtgcc
     3241 tccacctctc cccgctatgg ccgagccgga acaggcccgg gccgacctgt gggcgaccgg
     3301 ggtctcaccg gacgggcatc ccacgcgctt tatgcgcgat gagttgtcgg ccgatggggt
     3361 gatcaccgcg gtggacctcc gggctgtggc cgacggggcc cgggtccggg tggctggggt
     3421 ggtgacccat cggcaacgcc cccacacagc tggtggggtg accttcgtga acctggagga
     3481 cgaaaccggt ctgatcaacg tgatcgtctc gccaggctgc tgggtgcggt accgcgacgt
     3541 ggtgaccgcc tcggcactcg tcgtccgggg gagggtggag gccgtcgaag gggtggtcaa
     3601 cgtggtagct gagcggatcg agaccctagg ggtgcgactc ccggcccggt cccgtgactt
     3661 ccgctgaccg ctctctggag caggtcatat aaaggaaaca gacggttgtg cgcatctaca
     3721 ccttggggtt ctgatgtcgc cctcatccca ccctcggggg ttcaatcctt gagggggtct
     3781 agcgtgcccc gcttcagagg cggaccgtcc gaccagccag aacgccggtg tgctggccgc
     3841 tctgcaggaa gacctcgccg ttgaccagcg tctgtcggta gccgttggcg ccttggatcc
     3901 aacggggagc accgcctggg aagtcgtggg ccatctctgg gtagccgagg gccaggcctt
     3961 cgaggtcgat cacgttgatg tcggcaaaac ctccggcgac aagccggccc cgatcggaga
     4021 cgccgaatag gtcggctggt tcggaggtca ggcgccggac agcatcctcc agggtgaagc
     4081 gtccctcgtc gcgcatccag tgggtgagga agaaggtggg ctggctggca tccatgatga
     4141 gggtggcgtg ggcgcccgca tcggccaaac cgagggtcac atggggatgg gacagcatgc
     4201 ccagcacctc gtcgaggtcc tgattcagga tcggccatgt gaggacccgt cgtccgtcca
     4261 tctcgacgag aagatccagg atcgcttcgg ccaccgacat ctggcgttga gaggcgatgg
     4321 ctgcgacgct gtcctcgggg gtgaagacgt gacggaccgg ccggtcgctc agcgggtaga
     4381 tgcggttcca gtcgattcgg ttgtcggaca ccgaccgctc agcatcggcc agcagggtgg
     4441 cccgggaaac tgggtcgcgc aggcgagcca cccgctcccc taaggggagg tcggccaggc
     4501 tctgccagga accccaacgg tcgaacgggg ttcggccatc caacccgaac aggatcccta
     4561 tctggcgaga cgtggtctgg ggtcggaggc gggctccagc ggcgttctcg cggtctacgg
     4621 cggccaggac attccggtgg aggtctgggg cggcatcaac ttgggtcagg gccattgaga
     4681 cgtcgcagtc tcccgctcgg ctgatgtcgg catacagccc gacctcgtcc tgtaccgggt
     4741 cctccgaccc gttgccaatg tccacgtagg cgggagctac ctcaaagatc ccaccccggt
     4801 gacgcagcac gtcggcaaag gccatcaact cgtcggccga ggccttggta cccgggacgt
     4861 atcgcccgtc gggcaccgta tgtaacaggg tccgcgaggt agaaaacccc agggcaccgg
     4921 aagccagcgc ctggtcgacc atggtggcca tgacctcgat gtcctcggcg gccgctggcg
     4981 tctcgtccat ggctcgctct cccatggccg ctagccgaac cgcacagtgg ccgaccatcc
     5041 ccccgacgtt caggcccttg gggagacggt ccaactcgtc gaggtaatcg ccgtacgttt
     5101 cccagttcca ggacaacccc tccaggatgc ttgaggccgg gatgtcctcg actgactcca
     5161 tcatctcggc cagcatctct ttgccaccgg gggccacggg ggcgaacgtc accccgcagt
     5221 tgccgagtac gaccgaggtg accccgtgcc acgaggccga ggtgcccagc ggatcccaag
     5281 ccatctgggc gtcaaggtgg gtgtggatgt ccacgaatcc tggggtgacc accaacccgt
     5341 cggcatcgat ctcacgacgg gctcggcctt ccacccgacc cacctcggcg atgcggtcgc
     5401 tgtcgacggc tacgtccgca gtaaccggcg gggcgcccgt gccgtccacc acggtcccac
     5461 cgcggatgat gaggtcgtat gccattgcct gcctttccgg tgagcggcgc ccagacgtca
     5521 ggggcgtccg ccgacagtag ccgtgagcct ggtggccaag cccgtcggac gaacgcgtcg
     5581 tgctggaggc aaaggtctag tcgttcaggt cgtcgaagtc gggttcgatt tcgtccgcag
     5641 ggtcgtagtc cgggggcctg tgggatgctc tgtccatggt cggtgataac ccctatctgg
     5701 agggcgccct ggcaccggtg ctcgacgagg tcctagcgct ggacctacca gtgaccggga
     5761 ctttgcccga ggagttggag ggccggtggc tccgtaacgg tccgaatccc ctggggccaa
     5821 ctgatccggc cacccaccat tggttcttag gtgacgggat ggttcacggt gtgaggttgt
     5881 gcggcggccg agccgagtgg taccgcaacc gttgggtccg tggcccgagg gtggctgagg
     5941 cgctagggga gccccgcccc gccgggacct ccttcgt
//
LOCUS       DASCMR010000281         1773 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001366814, whole genome shotgun sequence.
ACCESSION   DASCMR010000281 DASCMR010000000
VERSION     DASCMR010000281.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1773)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1773)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1773
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001366814"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            156..1370
                     /locus_tag="QGG16_06655"
     CDS             156..1370
                     /locus_tag="QGG16_06655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24987.1"
                     /translation="MQRAMGLPDPDSDAMEAVVRTMLDDHWVSEGYAAPNSTVYPWQW
                     LWDSCFHVLVWLALGDSDRARRELAVALAAQTPSGFVPHMHYIRQPGFHEDLWGRSGD
                     SSITQPPMYGHAVAELVRAGEPVDGEVVERATAGLWFLLRGRRRDPSGLVRACHPWET
                     GADDSPRWDDHCPGGFDRARWRSVKNRLASTIETGSDGEAVANPVFAVAPAGFNALIA
                     FNARELVTVTGDDDLAAAADELVDALAEQWDDDRGTWVDAGSTANGAGRVRTLDALLP
                     LLVEDDERRTDRVVAQLLDPLAHGGPAGPTGVHRAEPVFDPNAYWRGPVWPQLAYLMV
                     RAVAPHSPGAAELLVRTTVAGAWASGMAEYWNPDTGAGLGAVPQSWTGLALVLARRPR
                     GGAVGDQPVDLG"
     gene            complement(1367..>1773)
                     /locus_tag="QGG16_06660"
     CDS             complement(1367..>1773)
                     /locus_tag="QGG16_06660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP24988.1"
                     /translation="DWVGEVVNLHDLEAGTCFNSYSWVQDDREIAIDTRVPCPGPHQH
                     EIYLRTAHPARPGAPWPGDREMEAYARAECYAAFAGFVGLIFELSELELGYLTPSRTD
                     FEHDRAVFRNIHCFVHRSDGTELVGTAAGSRL"
BASE COUNT          269 a          577 c          644 g          283 t
ORIGIN      
        1 cgtttacgat ccggaccggt cgaggatcgt cccagccggg ttcgatctcg ccggccaacc
       61 agtccacgtc gaagccgatc ccgctcaggg cgtcggccca catccgagct actaccgaaa
      121 cgccgtcggt ggggccgaaa cgaaaggaga cgatggtgca gcgagccatg ggtctcccgg
      181 atccggacag cgatgcgatg gaggccgtcg tacgcacgat gttggacgac cactgggtat
      241 cggaagggta tgcagccccc aactcgacgg tctacccgtg gcagtggttg tgggactcgt
      301 gcttccacgt cctggtgtgg ctggccctcg gtgacagtga ccgggcccgc cgcgagttgg
      361 cggtggcgtt ggccgcccag acgccgtcgg ggttcgtgcc ccacatgcat tacatccgcc
      421 agcccgggtt ccacgaggac ctgtggggga gatcgggcga ctcgtcgatc acccagccgc
      481 ccatgtacgg ccatgcggtg gccgaactgg tgcgggccgg cgaaccggtc gacggcgagg
      541 tggtcgagcg ggccaccgct ggcttgtggt tcctgctgcg gggtcgccgt cgtgatccct
      601 caggcctcgt ccgggcctgt catccgtggg agacgggggc cgatgactca ccccgctggg
      661 acgaccactg tcccggcggt tttgaccgtg ctcggtggcg gtcggtgaag aaccggctgg
      721 cctcgaccat tgagaccggt tccgatggcg aggcggtagc caacccggtg ttcgcggtgg
      781 cgcccgcggg cttcaatgcc ctgatcgcgt tcaacgcccg ggagttggtc acggtgaccg
      841 gcgacgatga ccttgcggcg gccgccgacg agctggtcga cgccctagcc gaacagtggg
      901 acgacgaccg aggcacctgg gtggacgccg gctccacagc caacggagcg ggccgggtcc
      961 gaacgctgga cgccctgctg ccactgctgg tcgaggacga tgagcgacgg accgaccggg
     1021 tggtagctca gctcctggat ccattggccc acggcggacc ggccggtccg accggcgtgc
     1081 accgggctga gcccgttttc gatcccaacg cctactggcg gggaccggtc tggccgcagc
     1141 tggcctacct gatggtgcgg gccgtggctc cccattcgcc aggggctgct gagttgctgg
     1201 ttcggacgac ggtggcaggg gcatgggcct cgggcatggc cgagtactgg aaccccgaca
     1261 ccggcgccgg cctgggagcc gtcccccagt cgtggaccgg cctggccctg gtgctggccc
     1321 gccggccgag gggaggcgcg gtgggggacc agccagtgga tcttggctag aggcgggatc
     1381 ccgcagccgt acccaccaac tcggtcccgt cggagcggtg gacgaagcag tggatgttgc
     1441 ggaagaccgc ccggtcgtgc tcgaagtcag tccgtgacgg ggtcaggtag cccaactcga
     1501 gttccgagag ttcgaagatg agtcccacga atccagcgaa ggccgcgtag cactcggcac
     1561 gggcataggc ctccatctcc cggtcccccg gccacggtgc gccgggccgg gccggatggg
     1621 cggtccgcag gtagatctcg tgctggtggg gaccggggca gggcacccgg gtatcgatgg
     1681 cgatctctcg gtcgtcctga acccacgaat aactgttgaa gcaagtcccg gcttccaagt
     1741 cgtggaggtt gaccacctcg cccacccagt cgg
//
LOCUS       DASCMR010000282         6933 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001368375, whole genome shotgun sequence.
ACCESSION   DASCMR010000282 DASCMR010000000
VERSION     DASCMR010000282.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 6933)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6933)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6933
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001368375"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..510)
                     /locus_tag="QGG16_06665"
     CDS             complement(<1..510)
                     /locus_tag="QGG16_06665"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440627.1"
                     /note="Produces ATP from ADP in the presence of a proton
                     gradient across the membrane. The beta chain is a
                     regulatory subunit; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HJP24989.1"
                     /translation="MTDTALTDGHIVGIAGPVIDAEFPTGDLPQINTALEFDVEIDGT
                     ELTIVAEVAQQIGDSRVRAIAMKPTDGLTRGTVVRNTGAGISVPVGDSTLGHVFSVTG
                     QGLDDPTAGQGADRWEIHRPAPSFDSLEPKAQMFETGVKVIDLLTPYLQGGKIGLFGG
                     AGVGKTVLIT"
     gene            complement(548..1486)
                     /locus_tag="QGG16_06670"
     CDS             complement(548..1486)
                     /locus_tag="QGG16_06670"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF004145.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HJP24990.1"
                     /translation="MAGGKERVLRRRIGSVQNTKKITRAMELIAATRVVKAQQRARAA
                     KPYAEQITAVIENLAAGGAEVDHPLLRQAEKVERVGVVVISSDRGLAGPYNSAVIRAA
                     ERQVQNARSEGADYALVVIGKKARDYFAFRDFIVDSYTDGISDNPTYEDARRVAETVA
                     SMFIDGRVDRVELVYTEFISIGSQKVATRRFLPLESTETIATEGGGEAGVTGSFEFEP
                     SPEAVLAALLPRYVEARLFGALLESAASEHANRQRAMKAATDNAEELIVKLSREMNRA
                     RQDSITTEIMEIVSGAEALGSDDETTDMPVAAGVEA"
     gene            complement(1568..3184)
                     /gene="atpA"
                     /locus_tag="QGG16_06675"
     CDS             complement(1568..3184)
                     /gene="atpA"
                     /locus_tag="QGG16_06675"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HJP24991.1"
                     /translation="MSELTINTADIAETIRKNLDGFTPSLEESQVGRVLEVGDGIARV
                     SGLPDAAVNELLQFESGTFGLALNLDEGSIGAVVLGEVDDIEEGQTVRATGDILSLPV
                     GDGLLGRVVNALGEPIDGKGPLTNTQQRRMEIQAPGIMGRKPVHEPMQTGIKAIDSLI
                     PIGRGQRELIIGDRKTGKTTIAMDTIINQAGQGMKCVYVAIGQKASTVAQNVAVLEAH
                     GAMDYTVVVVAPASDPAPFKYLAPYAGCAIGQHWMDNGQHALAVYDDLSKQAEAYRQM
                     SLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDELGAGSMTALPVIETKAGDVSAFIP
                     TNVISITDGQIFLQDDLFKSGVRPAVDVGISVSRVGSAAQVKAMKNAVGTLKSDLQQF
                     RELEAFAAFGSDLDAVSQAQLDRGYRLTELLKQGLNSPLLVEEQVVSIWAGTRGHLDG
                     VDVSDVSRFEGELLDWFRTRHADVLADISASGKIADEDAFDASIAAFAEQFEGSVAGG
                     STPDAESTDTASTIVDAGTTLPEEDISETE"
     gene            complement(3229..3759)
                     /gene="atpH"
                     /locus_tag="QGG16_06680"
     CDS             complement(3229..3759)
                     /gene="atpH"
                     /locus_tag="QGG16_06680"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:NF012439.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F1 subunit delta"
                     /protein_id="HJP24992.1"
                     /translation="MADPTVSGYADALFAVAAAEGDLAAVEDELFRFAQALRSDGELY
                     STLADQSVPVSRRQQIVEDLLGGKASATTTALISMVVGAGRAAELPAIVDALVERSAA
                     SRNKAVATVRSAVDLTADQRDRLAAAINTRTGKAVEIKVVIDPTVLGGVVTEIGDDII
                     DGSVRRRLNQLRESFR"
     gene            complement(3752..4462)
                     /gene="atpF"
                     /locus_tag="QGG16_06685"
     CDS             complement(3752..4462)
                     /gene="atpF"
                     /locus_tag="QGG16_06685"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HJP24993.1"
                     /translation="MNNRRTRLLVAPLFALLGFVAFAGPASASGESVGSCMAHHLDEA
                     VEANNGDLHETLEDHHVQDELEKCFEAPSPILPELNEVIWGGSAFLILFVLMVKKGFP
                     AVKGAMDARAEKIRSDLDAAEQAKTDAQSVQADYEARLADSKSEASRLIDEARGAADQ
                     VKADLMARHEAELADLRTRAAADIESSRTQAIADLRAEVAGIALGAAERVVQSSLDAE
                     VQGRLIDAYIDEVAGSNG"
     gene            complement(4519..4776)
                     /gene="atpE"
                     /locus_tag="QGG16_06690"
     CDS             complement(4519..4776)
                     /gene="atpE"
                     /locus_tag="QGG16_06690"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015799191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase F0 subunit C"
                     /protein_id="HJP24994.1"
                     /translation="MLNVLAQTAAGEMLEGLKAIGAGLGYGLAAIGPGVGIGTVVGNA
                     ISSMARQPESAGMVRTTMFLGIAFTEALALIGFVVFILLMP"
     gene            complement(4902..5669)
                     /gene="atpB"
                     /locus_tag="QGG16_06695"
     CDS             complement(4902..5669)
                     /gene="atpB"
                     /locus_tag="QGG16_06695"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000276 - mitochondrial
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_component: GO:0045264 - plasma membrane
                     proton-transporting ATP synthase complex, coupling factor
                     F(o) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HJP24995.1"
                     /translation="MNVLALDFPPVSHLFEWPDILFSGTAYAINKTVLIYLAAVVITA
                     AIFLLAGRKTGSLVPAGIQHVAESGVTFIEESVVMETIGEEGKKFMPFLTTMFFFILF
                     SNIFEVIPGIQFPANSRMAIPITLALVVWVIYNVVGIRSQGLGGYLKNSLFPPGVPVA
                     LYLIVTPIELVSTFVVRPFSLAIRLWANMVAGHLLLVTFAVLTHTLWSSTYVGAVAPF
                     AMLTMMTGFEILVSVLQAFIFTILTAVYIGGSLHPAH"
     gene            complement(5694..6134)
                     /locus_tag="QGG16_06700"
     CDS             complement(5694..6134)
                     /locus_tag="QGG16_06700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit I"
                     /protein_id="HJP24996.1"
                     /translation="MNDASPVNELESMDPATETAIARDLTRRAIWVAPAFLLVGLLGW
                     GLDGLLSSALALVLVAVNFRLGAAIITRAAQISINALYGSVLGGYVARLALMTAVVLV
                     VKAVGLLATVPFAITLLVTHLGLLAWESRHVAMTLAAPGLKPTK"
     gene            complement(6131..6400)
                     /locus_tag="QGG16_06705"
     CDS             complement(6131..6400)
                     /locus_tag="QGG16_06705"
                     /inference="COORDINATES: protein motif:HMM:NF021073.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HJP24997.1"
                     /translation="MANDETREMRQGFGDAFAAAFELAATPAIFGFLGWLLDGRLGTT
                     PIFTIVFTVVTLAYASYRLAHSYGENLELARAERRAAWQAEGPLL"
     gene            complement(6562..>6933)
                     /locus_tag="QGG16_06710"
     CDS             complement(6562..>6933)
                     /locus_tag="QGG16_06710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl/decaprenyl-phosphate
                     alpha-N-acetylglucosaminyl 1-phosphate transferase"
                     /protein_id="HJP24998.1"
                     /translation="APVFIPVVILGVPLFDLAFAVVRRAATPGVRVTAADKDHLHHRL
                     LRLGHGHRRAVLILWGWSALLSGFVLWPTYSGNGDAIVPMGIGAIGLLLFTVLHPRFR
                     SATEPLSEEPFSGASVPGEQV"
BASE COUNT         1219 a         2179 c         2351 g         1184 t
ORIGIN      
        1 ggtgatgagc accgtcttgc ccacgccagc accaccgaac aggccgatct tgccgccctg
       61 cagatacggg gtgaggaggt cgatgacctt caccccggtt tcgaacatct gggccttggg
      121 ctccagcgag tcgaacgacg gagccggacg gtggatctcc cagcgatctg caccctgccc
      181 ggccgtcggg tcgtcgaggc cctgaccagt cacgctgaac acgtggccca gcgtgctgtc
      241 gccgacgggc acgctgatgc cggcgccggt gttgcgaacc acagtgccgc gggtcagtcc
      301 gtcggtcggc ttcatggcaa tggcccgtac ccggctgtcg ccgatctgtt gtgccacctc
      361 ggccacgatc gtgagttccg taccatctat ctcgacgtcg aactccagtg ccgtgttgat
      421 ctgcggcagg tccccggtgg ggaactcggc gtcgatcacc ggtccggcga tgccgacgat
      481 gtgtccgtcg gtgagcgcgg tatcagtcat gtgttgctcc tggctcttcg ttctcgtacg
      541 tgtttgctca agcctcgacg ccggcggcga cgggcatgtc ggtggtctcg tcatctgatc
      601 cgagtgcctc ggcaccactg acgatctcca tgatctcggt ggtgatcgaa tcctggcggg
      661 cccggttcat ctctcgggaa agcttgacaa tcagttcttc ggcattgtct gtggccgcct
      721 tcatggcccg ctggcggttg gcatgctctg aagcggccga ctcgagcagg gcgccgaaca
      781 ggcgggcctc gacgtagcgg ggcagcaggg cggccagcac ggcctccggc gagggttcaa
      841 actcgaagga accggtgacc ccggcttcac cgccaccctc ggtggcaatg gtctcggtgc
      901 tctctagcgg caggaagcgg cgggtggcca ccttctggct gccgatgctg atgaactcgg
      961 tgtagacgag ctcgacgcgg tcgacccgac catcgatgaa catcgacgcc actgtctcgg
     1021 ccacccggcg ggcgtcctcg taggtggggt tgtcgctgat gccgtcggtg taggagtcga
     1081 cgatgaagtc tcggaaagcg aagtagtcgc gggccttctt accgatgacg accagcgcgt
     1141 agtcagcgcc ttcggaccgg gcgttctgca cctggcgctc ggcggcccgg ataaccgccg
     1201 agttgtaagg acctgccagg ccacgatccg acgagatgac gactacgccg acccgttcga
     1261 ccttttctgc ctggcggagc agcggatggt ccacctcggc gccaccggca gccaaattct
     1321 cgatcaccgc ggtgatctgc tccgcgtacg gcttggcggc ccgggcccgc tgctgagcct
     1381 tgacgacccg cgtcgccgcg atgagctcca tggctcgggt gatcttcttg gtgttctgga
     1441 cgctgccgat ccggcgtcgc aggacccgtt ccttaccgcc agccatcatg ggctccaatc
     1501 acggtcgggg cgtgcgccca gacagtggga cgaaacgccg cgatgccctg cgggccggtc
     1561 acgaggttca ctcggtctcc gaaatgtcct cttcggggag cgtggtaccg gcatcgacga
     1621 tggtcgaggc ggtgtcggtc gactccgcat cgggggtcga gccgccggcc accgaaccct
     1681 cgaactgttc agcgaatgcg gcgatagacg catcaaaggc gtcttcgtcg gcgatctttc
     1741 ccgatgcgct gatgtcggcc agcacgtcgg cgtgacgggt ccggaaccag tccagaagtt
     1801 cgccctcgaa gcggctgaca tcggaaacgt ccacaccgtc aaggtgaccc cgggtgccgg
     1861 cccagatcga cacgacctgc tcctcgacga gcagcggcga gttgaggccc tgcttgagaa
     1921 gttcggtgag gcggtagccc cggtccagct gagcctgtga aacagcatcc aggtccgaac
     1981 cgaaggccgc gaaggcctcc agttcgcgga actgctgcag gtcggacttg agcgtgccca
     2041 cggcgttctt catggccttg acctgggcgg ccgatccgac gcgggacacc gagatgccga
     2101 cgtccacggc gggtcggacg cctgacttga ataggtcgtc ctggaggaag atctggccgt
     2161 cggtgatcga gatcacgttg gtcggaatga acgcagagac gtcaccagcc ttggtctcga
     2221 tgaccggcag ggccgtcatc gagccggctc caagctcatc gctgagcttg gcggcccgct
     2281 ccagcagacg gctgtgcagg tagaagacat cacccgggta ggcctcgcgg cccggtgggc
     2341 ggcgaagcag caacgacatc tgtcggtagg cctcggcttg cttggagaga tcgtcgtaga
     2401 cggccagggc gtgctggccg ttgtccatcc agtgctggcc gatggcgcag ccggcgtagg
     2461 gggcgaggta cttgaatggt gccgggtcgg acgccggggc gaccaccacg acggtgtaat
     2521 ccatggcccc gtgggcctcg agcacggcca cgttctgagc cactgtggac gccttctggc
     2581 caatggccac gtagacgcac ttcattccct gcccggcctg gttgatgatc gtgtccatgg
     2641 cgatcgtcgt cttgccggtc ttacggtcgc cgatgatcag ctcgcgctgg ccacgaccga
     2701 tcgggatgag cgagtcaatg gccttgatgc cggtctgcat cggctcgtgc actggcttgc
     2761 gacccatgat gcccggtgcc tggatctcca tgcggcgctg ttgggtgttg gtcagcgggc
     2821 ccttgccgtc gatcggctcg cctagggcgt tgacgacgcg gcccaggagg ccgtcgccga
     2881 cgggcaggga cagaatgtcg ccggtggccc gcaccgtctg gccctcctcg atgtcgtcga
     2941 cctcgcctag gaccaccgca ccgatggatc cctcgtcgag gttcagggcg agaccgaacg
     3001 tgccgctctc gaactggagc agctcgttga ccgccgcgtc gggcagaccc gacacgcggg
     3061 cgatgccgtc gccgacttcg aggacccggc cgacctggct ctcttccagg ctgggggtga
     3121 acccgtcgag gttcttgcgg atcgtttcgg cgatgtccgc cgtgttgatc gtgagttcgg
     3181 acatggtgtg tctctctcgt ctcttgctcg tatgccgctg gccggggcct agcggaagct
     3241 ctcgcgaagc tggttcaggc ggcgtcggac gctgccgtcg atgatgtcgt cgccgatctc
     3301 ggtgactacg ccaccgagga ccgtcgggtc gatgacgacc ttgatctcga cggccttgcc
     3361 ggtacgggta ttgatggcgg cggccaggcg gtcccgctga tcagcggtca ggtcgaccgc
     3421 cgatcgcacg gtggccacgg ccttgtttcg tgaagcggcg ctgcgttcga ccagtgcatc
     3481 cacgatggcg ggaagttcgg cggctcgacc ggcaccgacc accatggaga tgagggccgt
     3541 cgtggtggcc gaggccttac cacccagcag gtcttcgacg atctgttggc gacgggacac
     3601 cggcacgctc tggtcagcca gggtcgagta cagctcaccg tcagaccgga gggcctgggc
     3661 gaaacggaac aactcgtcct ccaccgcggc gaggtcaccc tctgccgcgg cgacggcgaa
     3721 caatgcgtcg gcgtagccgg acaccgtcgg gtcagccatt gctgccggcc acctcgtcga
     3781 tgtaggcgtc gatcagacgg ccctgcacct ccgcgtcgag gctggactgg accacacgct
     3841 cggcggcacc gagggcgatc ccggccacct cggcccgtag gtcggcaatg gcctgggtcc
     3901 gcgacgactc gatgtcagcg gctgcccggg tccggaggtc ggcgagctcc gcctcgtggc
     3961 gggccatcag gtcggccttg acctggtcag ctgctccacg ggcctcgtca atgaggcgcg
     4021 aagcctcgga cttggaatcg gccagacgtg cctcgtagtc ggcctggaca gactgggcgt
     4081 cagtcttggc ctgctcggcg gcgtcgaggt cgcttcggat cttctcggcc cgggcgtcca
     4141 tcgcgccctt cacggccgga aagcccttct tgaccatgag cacgaacagg atcaggaaag
     4201 cggaaccgcc ccagatgacc tcgttcagct ccggcaggat cgggctgggt gcttcgaagc
     4261 acttttccag ctcgtcctgg acgtggtggt cctcgagggt ctcatgtaga tccccgttgt
     4321 tcgcctcgac cgcctcgtcg agatggtggg ccatacagga acccacgctc tcacccgatg
     4381 ccgaggccgg gccggcgaag gccacgaacc ccagaagggc gaacagcggg gccaccagca
     4441 ggcgggtccg tcggttgttc atgggtgtcg tctctctgtt cgaagggtct ctctgatgtg
     4501 tgatgccgga gttggcaatc agggcatcag gaggatgaag acgacgaaac cgatcagggc
     4561 gagcgcctct gtgaaggcga tgccgagaaa catcgtggtc cggaccatgc cggccgactc
     4621 gggttggcgg gccatcgaag agatggcatt accgaccacg gtgccgatac cgacacccgg
     4681 gccaatggcc gccaggccgt aaccgagacc tgcaccgatg gccttgaggc cctcgagcat
     4741 ctcaccagct gccgtctgcg ccagaacgtt cagcacttgg attctcctgt tttctcatgc
     4801 acccggccgg tgtttccgtc cggagacttg tgttgttgat agggattttc gtgcccacca
     4861 gatggtggac ggcgatcagt tgtgcccgaa ccggattcga ctcagtgtgc gggatggagg
     4921 gagccgccga tgtacacggc ggtcaggatc gtgaagatga aagcctgcag gaccgacacc
     4981 agaatctcga agccggtcat catggtcagc atggcgaagg gggccacggc gccgacgtag
     5041 gtggacgacc agagggtatg ggtcagcacg gcgaaggtga ccagcaggag gtggccggca
     5101 accatgttgg cccagagccg gatggcaagc gagaagggcc gcacgacgaa ggtcgacacc
     5161 agctcgatgg gcgtcacgat caggtacagg gccacgggca cgcccggggg gaagagcgag
     5221 ttcttcaggt agccgccgag gccctgagag cggatgccca caacgttgta gatgacccac
     5281 acgacgagcg ccagcgtgat ggggatggcc atccggctgt tggccgggaa ctgaatgccc
     5341 ggaatcactt cgaagatgtt cgaaaagagg atgaagaaga acatcgtggt caggaagggc
     5401 atgaacttct tgccctcctc gccgatggtc tccatgacca ccgactcctc gatgaaggtc
     5461 acaccggact cggcgacgtg ctgaatgccg gccggaacca gcgaaccagt cttgcggccg
     5521 gccagcagga agatggccgc ggtgatcacc acggctgcca gatagatcaa caccgtctta
     5581 ttgatggcgt aggcggtccc gctgaagagg atgtcaggcc actcgaagag atggctgacc
     5641 ggcgggaagt cgagtgcgag cacgttcacg tggagcgctt ctcctgtggg gatctacttg
     5701 gtgggcttca ggccgggagc ggcgagcgtc atggcgacgt gccgggattc ccatgccaga
     5761 aggccgagat gggtgacgag cagggtgatg gcgaacggca cggtggcaag caggccgacg
     5821 gccttgacca ccagcacgac ggcagtcatc agggcaagac gggccacata gccaccgagg
     5881 acggagccgt acagagcgtt aatggagatc tgtgcggccc gggtgatgat cgcggcaccc
     5941 agacggaagt tgacggccac cagcacgagg gccagtgccg acgacagaag gccgtcgagg
     6001 ccccagccga gcaagccgac cagcaggaag gccggagcaa cccagatcgc ccgccgggtc
     6061 aggtcgcggg cgatagcagt ctcggtggcc ggatccatgg attcgagctc gttgacgggg
     6121 gaagcgtcgt tcacagcagc ggaccctcag cctgccaggc ggcccgacgc tcggcgcggg
     6181 ccaactccag gttctcgccg tagctgtggg ccagtcggta ggaggcgtag gccagcgtca
     6241 cgacagtaaa gacaatggtg aagatagggg tggtgccgag gcgaccgtcg agcagccaac
     6301 ccaggaaacc gaagatggcc ggcgtggccg cgagttcgaa ggccgcggcg aacgcgtcgc
     6361 cgaatccctg tcgcatctcg cgcgtctcgt cgttggccat cgggggaatc ctccgccggc
     6421 gggtcccatc gaacccccgg gcgtaccgat cctggtacgg gtcgtcgtgc agatcggtcc
     6481 gacgacgaca gtcaccggac gcgcttgtga atctaatcac caagtccccc gcggacaacc
     6541 cgtcaccgcg cgcccaatcc gtcacacctg ttcccccggt acggatgctc cagagaaggg
     6601 ttcctcagag aggggctcgg tcgccgaccg gaaccgggga tgcaacacgg tgaacaggag
     6661 gaggccaatg gctccgatgc ccatggggac aatggcgtcg ccgttgcccg agtaggtggg
     6721 ccacaacaca aatccggaca gcagggcact ccagccccag aggatcaaca cggcacgccg
     6781 gtggccgtga cccagcctca gcagacggtg gtgaaggtgg tccttgtccg ccgccgttac
     6841 ccgaacgcct ggtgtagcgg cccgacgcac cacggcaaag gccaggtcga acaagggcac
     6901 cccaagaatt accaccggga tgaacaccgg agc
//
LOCUS       DASCMR010000283         2166 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001373007, whole genome shotgun sequence.
ACCESSION   DASCMR010000283 DASCMR010000000
VERSION     DASCMR010000283.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2166)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2166)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2166
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001373007"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1173
                     /gene="sucC"
                     /locus_tag="QGG16_06715"
     CDS             <1..1173
                     /gene="sucC"
                     /locus_tag="QGG16_06715"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: protein motif:HMM:NF001913.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HJP24999.1"
                     /translation="DRVDLFEYQGKQFFARYGMPVSDGEIAFTVDEAVAAAERLGTPV
                     MVKAQVHTGGRGKAGGVKFAATIDDVRTHATSILGLDISGHVVGRVWLEKASDIAEEY
                     YASFTLDRSAKKHLGMLSAEGGVEIETVAEKNPDAIAKVWIDPVDGLDETTAREWVIA
                     AALPEAAFEGTVAILQQLYTAYVEGDADLVEINPLILTPEGRVHVLDAKVTLDANSTF
                     RHEDYAAFDETQTRDERETAAHARGLQYVGLDGSVGVIANGAGLAMSTVDVVNQVGGS
                     PANFLDIGGGANADVMAGALEVINNDPAVRSIFINIFGGITRGEEVANGIVGALERVD
                     IDAPIVIRLDGTNADEGRAILEPHLSDSLQMAPTMLEAARRAVGLASAGYDEGSAR"
     gene            1170..2060
                     /gene="sucD"
                     /locus_tag="QGG16_06720"
     CDS             1170..2060
                     /gene="sucD"
                     /locus_tag="QGG16_06720"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HJP25000.1"
                     /translation="MSIFVDVDTKVVYQGLTGSQGRYYGLLNRDYGTQVVAGTNPRKA
                     GTDVDGIPIYASVAEAVAETGATASCIFIPAPGVRDAVLEAAEGGVEFIVAITEGVPA
                     HDEAEFYNRLKRDHPGVQMLGPNCPGIISPGQANIGITAGHIALPGGPVGIVSRSGTL
                     TYQALYELKEKGIGCTTCVGIGGDPVPGTSFIDCLRAFEADPETKAVMMIGEIGGSAE
                     EEAAEFIAEHMTKPVSAYVAGVTAPAGKKMGHAGAIVSGGRGTAAAKMEALRDAGVRV
                     GLNPTEAGEHMADIVSEMGG"
BASE COUNT          397 a          679 c          729 g          361 t
ORIGIN      
        1 gaccgggtgg atctgttcga gtaccaggga aagcagttct ttgcccgcta cggcatgccc
       61 gtctctgacg gtgagattgc cttcacggtg gacgaggcgg tggctgcggc cgaacgtctc
      121 ggtaccccgg tcatggtcaa ggcccaggtc cacaccggtg ggaggggaaa ggccggtggc
      181 gtcaagttcg ccgcaacaat cgacgacgtg cgtacccacg ccacgtccat cctcggcttg
      241 gacatcagtg gccatgtggt agggcgggtt tggcttgaga aggcgtccga tatagccgag
      301 gagtactacg cctcgttcac cctggaccgg tcagccaaga agcaccttgg catgctgtca
      361 gctgaaggcg gcgtggagat tgagacggtg gccgagaaga accccgacgc catcgcaaag
      421 gtgtggatag atccggtgga cgggctcgac gagaccacgg cgcgcgaatg ggtgatcgcc
      481 gccgccctac ctgaagctgc cttcgaagga acggtggcca tcctccagca gctctacacg
      541 gcctacgtcg agggtgacgc cgacttggtc gagatcaacc cgttgatcct gacccccgag
      601 ggtcgagtcc acgtgctgga cgccaaggtc acactcgacg ccaactcaac gttccgccac
      661 gaggactacg cggccttcga cgagacccag acccgcgacg aacgcgagac ggcggctcat
      721 gcccggggtc tgcagtacgt ggggttggac ggctcggtag gcgtgatcgc caacggtgcc
      781 ggcctggcca tgtccacggt cgacgtggtc aaccaagtgg gcggcagccc ggcgaacttc
      841 ctggacatcg gcggcggcgc caacgccgat gtcatggccg gagcactgga ggtcatcaac
      901 aacgacccgg ccgtgcggtc catcttcatc aacatcttcg gaggcatcac ccgtggcgag
      961 gaagtcgcta acggcattgt gggcgccctc gaacgggttg acatcgacgc cccgatcgtc
     1021 atccgcttgg acggcaccaa cgccgacgag ggtcgggcca tcctcgaacc acacctgtcc
     1081 gacagtctgc agatggcgcc caccatgctt gaggcggccc gtcgggccgt gggtctggcc
     1141 agtgcgggtt acgacgaggg gagtgcccga tgagcatctt cgtcgacgtc gacacgaagg
     1201 tcgtttacca aggcctgacc ggcagccagg gtcgctatta cggcctgttg aatcgtgact
     1261 acggcacgca ggtcgtagcc ggaaccaatc cccgtaaggc cggaaccgac gtggatggca
     1321 tccccatcta cgcctcggtc gccgaggcgg tcgccgagac tggggctacg gcctcgtgca
     1381 tcttcattcc ggcccccggc gtgcgcgacg ccgtgctgga ggctgccgag ggtggtgtgg
     1441 agttcatcgt ggccatcacc gagggtgtac cggcccacga cgaggccgag ttctacaacc
     1501 ggctgaagcg cgaccatccc ggtgtccaga tgctgggccc caactgcccg ggcatcatct
     1561 cgccgggaca ggccaacatc ggcatcaccg ccggccacat cgccctgccc ggcggaccgg
     1621 tcggcatcgt gagccgatca ggcacgctta cctaccaggc gctgtacgaa ctcaaggaga
     1681 agggcatcgg ctgcaccacg tgcgtgggca ttggtggcga tcccgttccg ggcacgtcgt
     1741 tcatcgattg cctccgggcc ttcgaggccg accctgagac gaaggccgtg atgatgatcg
     1801 gtgagatcgg agggtctgcc gaggaggagg ccgccgagtt cattgccgaa cacatgacca
     1861 agcccgtgtc ggcttacgtg gccggcgtga cggcgcccgc aggaaagaag atgggccacg
     1921 ccggtgccat cgtctctggt ggacggggca cagcggccgc caagatggaa gccctacgcg
     1981 atgctggtgt gcgggtgggt ctgaacccca ccgaggctgg cgaacatatg gctgacatcg
     2041 tctctgaaat gggtggctga gcgggccact gagccgaacc gcccggaagc cgtccgaact
     2101 gtcgctggta cggtcgtcaa catgtcgctg gcggtactgg tctcgggtac cggttcgatc
     2161 ctggat
//
LOCUS       DASCMR010000284         3505 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001377352, whole genome shotgun sequence.
ACCESSION   DASCMR010000284 DASCMR010000000
VERSION     DASCMR010000284.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3505)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3505)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3505
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001377352"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..362
                     /locus_tag="QGG16_06725"
     CDS             <1..362
                     /locus_tag="QGG16_06725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25001.1"
                     /translation="WGIGNRPAQITRRESWMTPGHDEVGIFYCHHDQVLDLPTGGRVV
                     ATADHCPVAALAVGDHMLGVQAHPEFDPHYADVLYRGRYTETYPEAFLDDALSTLDDP
                     LHRIDVAAWMLRFIRGC"
     gene            complement(402..1280)
                     /locus_tag="QGG16_06730"
     CDS             complement(402..1280)
                     /locus_tag="QGG16_06730"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJP25002.1"
                     /translation="MSDRVVLGRGAAIGAVGFMAFGPSIVKKVEMEEMAFVFWRLGIA
                     AAFYAVVLILAGNRLRWIDLKRSAVGGVIFAVNLVFFILSMRRTSAVNAVVIASLQPI
                     LLLAVGHRLFGERPHRSVYVGASVAFVGVVVAMAGSGASGVATWSGDLMAFVTMVLFA
                     AYYVASKQARAEMDSITYQLSLTVVATVVLLPIALVVEGGVALPSDGDWWMVAAMAVI
                     PGTGHLLTNFAHGHVTLTQMSLISLLFTAVAPLYAWWLIGERIVGQQGVGMAVVLIAL
                     SFVVTRPVEVVARTGD"
     gene            complement(1364..2035)
                     /locus_tag="QGG16_06735"
     CDS             complement(1364..2035)
                     /locus_tag="QGG16_06735"
                     /inference="COORDINATES: protein motif:HMM:NF013702.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HJP25003.1"
                     /translation="MDSSERQARARRTSAAWTAPLVYGAIRGLARVLLWPYFRTRSVG
                     REHIPSDGPVILAPVHRSNLDSLMLAPLMRRRLRALAKESLFTFRPLAWVIASLGAFP
                     VHRDTADRESMRIARELLNEGNVLLVFPEGKRHDGDGVGELFDGTAWLAAKTQSRVVP
                     VGIAGTGEAMPAGARFPRPTRVRMVVGPPIDPPEPRGARSVLRTWTEGLTDALQAVQD
                     EAAAR"
     gene            complement(2060..2437)
                     /locus_tag="QGG16_06740"
     CDS             complement(2060..2437)
                     /locus_tag="QGG16_06740"
                     /inference="COORDINATES: protein motif:HMM:NF012780.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HJP25004.1"
                     /translation="MVAISEVMTDSVVTLSPDSTISDAARVMVRGGFGSVVVVQGRML
                     LGILTERDVLRAAADEDDLRASRIDQWMTPDPDTAPPDFDTEEAAALMLSRGYRHLPV
                     EVDGELLGMVSLRDVLSARIAQR"
     gene            complement(2437..2682)
                     /locus_tag="QGG16_06745"
     CDS             complement(2437..2682)
                     /locus_tag="QGG16_06745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25005.1"
                     /translation="MSETPSVRLLAVIDALDALARDQSPAEAAAEMDPAVLQAFWREW
                     PHTSVWAGNLWRNLNLDLEVPSGAREDRDVDEVGGSG"
     gene            complement(2697..>3505)
                     /locus_tag="QGG16_06750"
     CDS             complement(2697..>3505)
                     /locus_tag="QGG16_06750"
                     /inference="COORDINATES: protein motif:HMM:NF017760.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJP25006.1"
                     /translation="GLAFSAALGIYLVGFSVLTTVKTGWSPTGGGGSLRSQLGDGISY
                     VRARPEMRLAFRLAFTVASLGAVFAFSLTAGVADDLYGLGGGGLGVLATSAGVGSLLA
                     SGYISGAGSRVARSTMEYRSILLYGSGLVVVASTDWMAVGIVGYLCMGMAHMLHGTTL
                     STALQIRVDDAYRGRVMSVFLVAVLSGIPLGGLTFGILSDLVGLRWVALGAGCLLVIH
                     ALVFQHRGLLVMLDNEVVEVDGGSYPTGPVAQPPDSGDDQRTDDGSTDRL"
BASE COUNT          701 a         1251 c         1067 g          486 t
ORIGIN      
        1 catggggaat cggcaaccgg cccgcccaaa tcacccgacg ggaatcttgg atgacaccgg
       61 gtcacgacga ggtgggcatc ttctactgcc accacgacca ggttttggac ctgcccaccg
      121 gtggccgtgt cgtggccacc gcggaccact gtccggtggc cgcgctggcc gtcggcgacc
      181 acatgctggg cgtccaggcc caccccgagt tcgaccccca ctacgccgac gtgctttacc
      241 ggggccgcta caccgaaacc tatcctgagg ctttcctcga cgacgccctg tcgacgctgg
      301 acgatccgct ccaccggatt gacgtggctg cctggatgct gcggttcatc cgcggctgct
      361 gacgccgact ccggcaaccg gtcgagccgc cagtcggctg atcagtcgcc ggttcgggcc
      421 accacttcga cgggccgggt caccacgaag gacagggcga tcagaaccac ggccatcccc
      481 accccctgct gaccaacgat gcgttcaccg atcaaccacc acgcgtagag cggagccacc
      541 gcggtgaaca acaagctgat caggctcatc tgggtcagcg tcacgtggcc gtgagcgaag
      601 ttggtgagta agtgaccggt cccgggaatg acggccatgg cggccaccat ccaccagtct
      661 ccgtccgacg gcagagccac gccaccctcg accaccagcg cgatgggcag gagaaccacc
      721 gtggccacca cggtaagcga cagctgatac gtgatggaat ccatctcggc ccgggcctgc
      781 ttggaggcca cgtagtaggc ggcaaacagg accatggtca cgaaggccat caggtcgccc
      841 gaccaggtcg ccacgccact agcccccgaa ccagccatgg ccaccactac gccgacgaag
      901 gccacggagg cacccacgta gaccgatcgg tggggtcgtt caccgaacag tcgatggccg
      961 acagccaaca ggaggatcgg ttgcaacgag gcgatgacca ccgcgttgac ggcactggtc
     1021 cgacgcatgg acaagatgaa gaacacgagg ttcaccgcga agatcacacc accgaccgcg
     1081 gatcgcttca ggtcgatcca tcggagccgg ttgcccgcca agatcaggac cacggcgtag
     1141 aaagccgcgg cgatgccgag ccgccagaag acgaaggcca tctcctccat ttcgaccttc
     1201 ttgacgatgc tggggccaaa ggccatgaag cccacggccc caatcgccgc accgcgcccc
     1261 aggactaccc gatctgacat ccggtgcacc cttccacctc tggtccgaca caccgtcgtc
     1321 gggagccgag acctacctgg cgggcctcga ggtgaactgg ctactaccgg gccgcagcct
     1381 cgtcctggac agcctgcagg gcatcggtca gcccctcggt ccaggttcgt agcacgctcc
     1441 gggcacccct gggctccggc ggatcgatcg gcggtccgac caccatccgc acccgggtcg
     1501 gtcgggggaa ccgggctccg gcgggcatgg cctcccccgt cccggcgatt cccacgggca
     1561 ccacacgaga ctgtgtcttg gccgccaacc acgccgttcc gtcgaacaac tcaccgacgc
     1621 cgtcaccgtc atggcgcttc ccctccggga agaccaacag gacattgccc tcgttcaaca
     1681 actcccgggc gatccgcatc gactcgcgat ccgcggtgtc acggtgcacg ggaaaggcac
     1741 ccaatgaggc gatcacccag gccaggggcc ggaacgtgaa caggctctcc ttggccagag
     1801 cccggagtcg tcggcgcatc agcggcgcca acatcaacga atcgaggttg gaacggtgga
     1861 cgggcgccag gattaccggc ccgtcgctcg ggatgtgctc acgcccgacg ctccgggttc
     1921 ggaagtacgg ccagagcagt acccgggcga gaccgcggat agcgccgtag accagcggcg
     1981 ccgtccacgc cgcgctggta cgacgggcgc gggcctgacg ttccgacgag tccatcgcgt
     2041 ctggtaaccg ggttcggggt cagcgctggg cgatgcgggc gcttagcacg tcacgcagac
     2101 tgaccatgcc cagaagttcg ccgtcgacct ccacgggaag gtggcgatag ccgcggctca
     2161 acatgagggc ggccgcctct tcggtatcga agtcgggcgg ggcagtgtca ggatccgggg
     2221 tcatccactg gtcgattcgg gatgcacgca ggtcgtcctc gtcggcagcg gcccggagga
     2281 cgtcacgctc ggtcaggatg cccaacagca tccgtccctg gaccacgacc accgaaccga
     2341 agccaccgcg gaccattacc cgcgcggcat cgctgatcgt cgaatcaggc gagagggtga
     2401 ccacgctgtc ggtcatcacc tcggagatgg cgaccatcag ccactccccc cgacctcgtc
     2461 gacgtccctg tcctcccgag ccccggacgg gacctccaga tccagattca gatttcgcca
     2521 gaggttgccg gcccacacgc tggtgtgggg ccactcccgc cagaaggcct gcaacacggc
     2581 ggggtccatc tccgcggcgg cctcagccgg gctctggtcg cgagccaacg cgtcgagggc
     2641 gtcgatcacg gcgagcagac ggactgatgg agtctcggac acaaagcctc ccgggctcac
     2701 agacgatcgg tcgatccgtc gtccgtcctt tgatcatccc ccgaatcggg cggctgggca
     2761 accggaccgg tcggatatga ccctccatcg acctcaacaa cctcgttgtc cagcatgacc
     2821 agcaagcccc gatgctggaa gacgagggcg tggataacca gtagacagcc ggctccgagg
     2881 gccacccagc gcaaacccac caggtcactg aggatgccaa acgtcaggcc gcccagcgga
     2941 atcccactca ggacagccac taggaacact gacatgaccc gaccccggta cgcatcgtcg
     3001 actcgaatct gcagggccgt actaagcgtc gtcccgtgga gcatgtgggc catgcccata
     3061 cataggtagc cgacgatccc gacagccatc caatccgtgg acgccaccac caccagcccg
     3121 gacccgtaca acaggatgct gcggtactcc atggtcgagc gagccacccg ggaaccggcc
     3181 ccactgatgt agccgctggc cagtagtgag cccacgcccg cgctagtggc cagaaccccg
     3241 agcccgccgc caccaaggcc atacagatcg tcggccaccc cggcggtcag cgagaaggcg
     3301 aacactgcgc caagcgaagc cacggtaaag gccagccgaa aggccaaccg catctcaggt
     3361 cgggcccgaa cataggaaat cccgtcgccc agttgcgatc ggagcgagcc accgcccccg
     3421 gttggcgacc accccgtctt cacggtggtc agcacgctga aaccaaccag atagataccc
     3481 agagccgcgg agaatgccag gccag
//
LOCUS       DASCMR010000285         2726 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001379948, whole genome shotgun sequence.
ACCESSION   DASCMR010000285 DASCMR010000000
VERSION     DASCMR010000285.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2726)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2726)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2726
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001379948"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1264)
                     /gene="purF"
                     /locus_tag="QGG16_06755"
     CDS             complement(<1..1264)
                     /gene="purF"
                     /locus_tag="QGG16_06755"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004044 - amidophosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HJP25007.1"
                     /translation="MTAAPVDQENLPAAGADDDTPREACGVFGVYAPGQPVAHLTYLG
                     LYALQHRGQESAGMAVSDGEALTVVKDMGLVSNAFDDRTLAALTGDLAIGQTRYSTTG
                     SSTWRNAQPVYRGVDRVEFALGHNGNLVNTEALAAEAGMLPGAITSDTDLMAELLATE
                     LASHADLPQAEAMDAALTAVLPRLHGAFSLVIADHERVIGVRDPNGFRPLCLGRLDGG
                     WVLASESPALDVIGAHMVRELDPGEVVVIDDTGWRSLRPFDDDAIDPKLCLFEFVYFA
                     RPDAVLYGQSVHHARVRMGEMLADQAPVEADLVMGVPESGMPAAEGYARASGIPYGQG
                     LVKNRYIGRTFIAPTQALRSAAVRMKLNPLRDTIEGQRLVVVDDSIVRGTTTRATVRM
                     LRDAGAAEVHMRVSSPPYRWPCFYGMDTG"
     gene            complement(1261..>2726)
                     /locus_tag="QGG16_06760"
     CDS             complement(1261..>2726)
                     /locus_tag="QGG16_06760"
                     /inference="COORDINATES: protein motif:HMM:NF014788.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AIR synthase-related protein"
                     /protein_id="HJP25008.1"
                     /translation="IEACLQLLDEGLVVGIQDLGGAGLTCATSETASRGGVGMDVDVS
                     AVHRRESGMEAHEVMTSESQERMLAIVEPEGLDRVLAICERWEVASTVIGRVTEGGAL
                     RILDGFDGEVLADVPAASLHEDAPLYDRPRSAPAEPRGPMADGLAPPVDMGADLLDLL
                     IDPAWVYRQYDHQLFLNTVVGPGDDASVLKLRHPTTGAETGRALAMTTDGNHRWCAVD
                     PRGGTARVVAESVLNLACVGARPLAVVNCLNFGNPEHPEVMWQLSEAIDGLAEACEAF
                     GAPVIGGNVSLYNESAGNDIDPTPVIGLLGMVDDLDRRPPGATLVDGHRLVLIGPHDV
                     SLGGSLWGSAHDAPGGILAPLDFDLHQRVADLIRTLVADGMVDGVHDLSAGGLGVAVA
                     EMVARSGVGAHLARVPDHRALFGEGPSRVMCCVDPERLTDVLAATEAAAVPATRIGLA
                     TGDRLIVKGLLDVAVDDVRQAHEDRLPEALGAGTTNR"
BASE COUNT          492 a          918 c          907 g          409 t
ORIGIN      
        1 tgccggtgtc catgccgtag aagcacggcc agcggtaggg cggcgacgag acccgcatgt
       61 ggacctccgc cgcgccagcg tcgcgaagca tccgcaccgt ggcccttgtg gtggtacccc
      121 gcactatcga atcgtcgacc accaccaggc gttgcccctc gatggtgtcg cgcaacgggt
      181 tgagcttcat gcgcaccgcc gcggaccgga gggcctgggt gggagcgatg aaggtccggc
      241 cgatgtagcg gtttttgacc agaccctggc cgtacgggat accgctggcc cgcgcatacc
      301 cctcagcagc gggcatcccc gactcaggta cccccatcac caggtccgcc tccaccggtg
      361 cctggtcagc caacatctca cccatacgga ccctggcatg atgcacgctc tgtccgtaca
      421 ggacggcgtc ggggcgagcg aagtagacga actcgaacag gcagagcttg gggtcgatgg
      481 cgtcgtcgtc gaacggtcgg agcgaacgcc aacccgtgtc gtcgatgacc actacctcgc
      541 cgggatccag ttcacgaacc atgtgggccc cgattacgtc cagcgccggc gactcagacg
      601 cgagtaccca accaccgtcc agacgcccca gacagagggg ccggaagcca ttcgggtcac
      661 gaacgccgat gacccgctcg tggtcggcaa tgaccagtga gaacgcgccg tggagtcgag
      721 gaagtacggc ggtcagggca gcgtccatgg cctcggcctg tggcaggtcg gcgtggctgg
      781 ctagttcggt ggccaaaagc tcggccatga ggtcggtgtc ggacgtgata gctccgggaa
      841 gcatcccggc ctcggcggcc aaggcctcgg tgttgaccag attgccgttg tggcctaacg
      901 cgaactcgac gcggtcgaca ccccggtaga ccggttgggc gtttcgccac gtgctggatc
      961 cggtggtcga atatcgggtc tggccaatgg ccaggtcgcc ggtgagggcg gccaacgtcc
     1021 ggtcgtcgaa ggcgttggac accaagccca tgtccttgac aaccgtgagg gcctcgccgt
     1081 cgctgaccgc cataccggcc gactcctgac cgcggtgctg caaggcgtag aggccgaggt
     1141 acgtcaggtg ggcgacgggc tggccaggcg catagacacc gaaaacgcca cacgcctcac
     1201 gaggggtgtc gtcgtccgca ccggccgccg ggaggttctc ctggtcgacg ggcgcagcgg
     1261 tcatcggttc gtagttccgg cgcccagggc ctcgggcaat cgatcctcgt gagcttgtcg
     1321 cacatcgtcg acggctacat ccagaagacc cttcacgatg aggcggtcgc cagtggccag
     1381 accgatccgg gtggccggta cggcggcagc ctcagtggca gccaacacat cggtgaggcg
     1441 ttccggatcg acacagcaca tgacccgact ggggccctcg ccgaataacg cccgatggtc
     1501 gggcacccgt gccagatggg cacccacgcc ggaccgggcc accatctcag ccaccgctac
     1561 ccccagccca ccagccgaca ggtcgtgtac gccgtcgacc atgccgtcgg caaccagagt
     1621 acggatcagg tcagccaccc gctggtgtag gtcgaagtcc agaggcgcca agatgccacc
     1681 gggggcgtcg tgcgccgatc cccagagtga accaccgagc gagacgtcgt ggggcccgat
     1741 caggaccaga cgatggccgt ccacgagggt ggcaccgggg gggcgccggt ccaggtcgtc
     1801 gaccatgccg agcaggccga tgaccggagt ggggtcgatg tcgttgccgg ccgactcgtt
     1861 gtagaggctg acgttgccac cgatcaccgg agcaccgaag gcctcacaag cctcggccaa
     1921 tccgtcgatg gcttcggaca gttgccacat gacctcggga tgctcggggt taccgaagtt
     1981 gagacagttc acgacagcca gcgggcgggc gcccacacag gccaggttca acaccgattc
     2041 ggcgaccacc cgggccgtgc caccacgggg atccacggca caccaccggt ggttgccatc
     2101 ggtggtcata gccagagccc gtccggtctc ggctcccgtg gtggggtggc gaagcttcag
     2161 cactgaagcg tcatctcccg ggccgaccac cgtattcaag aagagttggt ggtcgtactg
     2221 gcggtacacc caggctggat cgatcagcaa gtcgagcagg tcggccccca tgtcgaccgg
     2281 cggggcaagc ccgtcggcca tcggaccccg aggctcggcc ggagcgctgc gaggtcggtc
     2341 gtagagggga gcatcctcat ggagcgaggc ggccggtacg tcagccagta cctcgccgtc
     2401 gaagccgtcc agaatgcgca gggcgccgcc ctcggtaact cggccgatca ccgtggatgc
     2461 cacctcccac cgctcacaga tagccagaac ccggtcgagg ccttcgggct cgacaatggc
     2521 cagcatccgc tcctgggatt cgctggtcat gacctcgtgg gcctccatgc cggactcacg
     2581 ccggtgcaca gccgagacgt cgacgtccat gccaacaccg ccacgcgacg cggtttcact
     2641 cgtggcgcag gtcaggccgg cgccgcccag gtcctggatg ccgaccacaa ggccttcgtc
     2701 cagcaactgg aggcaggcct cgataa
//
LOCUS       DASCMR010000286         5848 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001380126, whole genome shotgun sequence.
ACCESSION   DASCMR010000286 DASCMR010000000
VERSION     DASCMR010000286.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5848)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5848)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5848
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001380126"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(55..1038)
                     /locus_tag="QGG16_06765"
     CDS             complement(55..1038)
                     /locus_tag="QGG16_06765"
                     /inference="COORDINATES: protein motif:HMM:NF012335.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HJP25009.1"
                     /translation="MRAVVCDGVGADLRLVENHPEPVAAPGGTTFSVTACGVCHSDLH
                     VVDGDFPSPLPMVLGHEVTGVHERLGSVMLYAPWGCRSCPQCSDGLEQICADATEAGL
                     FTDGGYAERMRVPDESYLSPLEGLDPYAAAPLACGGLTAYRAVDHGLSTLRDRGQGRG
                     EPPRAMVIGAGGLGQYAIRFLRLLTDAEVVAVDLDPAKQATALQVGAHSSCGPLDDPG
                     TADVVLDFLGADSTMVLAGASVRRQGLVAVVGLFGGRIPFGLGAVPHEARFLSSFWGS
                     QAQMDDLLDLARREPSIVQDVEVLGLSQAQEAHNRLRTGDVRGRLVLDPIR"
     gene            complement(1038..2219)
                     /locus_tag="QGG16_06770"
     CDS             complement(1038..2219)
                     /locus_tag="QGG16_06770"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP25010.1"
                     /translation="MIAGAQPVGRDDLDLIRIEVQRLADRYGCDYWRGLEPDRYPEEF
                     VADLTAHGWLGALIPEEYGGGGLDLTGASVVLEEVSASGGNPAACHAQMYVMGTLLRH
                     GSEEQKRRYLPRIASGELRLQAFGVTEPAAGSDTGSIRTRAVRDGDTWQVNGQKIWTS
                     RALHSDLMLLLARTTPSSECEHHTDGLSVFLVEMRDAAGDLVPGLTINPIPTMMNHST
                     TEVFFDEVVLPADALVGTEGMGFRHVLDGMNAERILIAAECIGDGRFFLERASAYASE
                     RVVFGRPIGANQGVQFPLARAYADLQAADLMRYRAAELFDAGQPCAAEANMAKLLASE
                     ASWSAGNAALDTHGGFGFAVEYDIERKLRETRLYKVAPISNNLVLTFLGEKVLGMPRS
                     Y"
     gene            complement(2216..2857)
                     /locus_tag="QGG16_06775"
     CDS             complement(2216..2857)
                     /locus_tag="QGG16_06775"
                     /inference="COORDINATES: protein motif:HMM:NF019349.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HJP25011.1"
                     /translation="MDYVRELILTGTIRSGEKIDQQAVSEALGVSRSPIREALVVLGR
                     EGLVELTPRRGASVADLSPEDIIDHYALFGVVSGRAAALAAETIDEEGLSELRKVHTR
                     FLDAGSELGPDDLQQLNHDFHRIINLTAPGRTRWLLRHLEHSVPSSYYEFADGWNHTA
                     VQHHAAILEAIASGDADGARRAMESHLQASGEAAAAQLAARGFFGDDIRETMP"
     gene            3046..3759
                     /locus_tag="QGG16_06780"
     CDS             3046..3759
                     /locus_tag="QGG16_06780"
                     /inference="COORDINATES: protein motif:HMM:NF019342.3"
                     /note="Members of this family of hydrolases with an active
                     site Cys residue belong to MEROPS family C26; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HJP25012.1"
                     /translation="MPPRPLIGITGRRKKGDQLVGNLDVLADFSVDLYYADYGRGVLE
                     AGGLPIHIPLDVDPAELVPRLDGVLLTGGADVNPQRYGHESSTDAFPPEPLRDEHECA
                     VLDAAYNDRIPVVGICRGLQIVNIHAGGTLHQDVPSHAGFDSPVTTEWHDVTFDDDTV
                     LGGIYGPYLPVNSLHHQTVDEVGRDLRVTARSGDDSVEGLEHENLPVVAVQWHPEMLP
                     TRAGDPLFAWLVSEASHLR"
     gene            complement(3809..5686)
                     /locus_tag="QGG16_06785"
     CDS             complement(3809..5686)
                     /locus_tag="QGG16_06785"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJP25013.1"
                     /translation="MFPDLRRDVLLPVAAGLILFGLFVGAGLLYQGQLGGQERLVTLA
                     LIDAVLVLGLQIYVGNTGILSFGHIGFGAIAGYAFALMAISPVEKAKRVADAPFGLAD
                     VHLGPWTSMGLALVVVLIVALVVGLGLARSGAESGAVSATVITLALLFVTHEVARNWP
                     DLTGGDRAGLSFRIGGGLDSRAPLYLALLAAILSALLYARSRGGRLAVAAREDDLAAR
                     AMGVNPLVQQMVALLLSVAVVGMGAGLRVYERGSILPRDFFFNLTLVTLVMLIVGGRR
                     SVSGALLGVAVITAGRELARRLGQDGFEFFGIGLDSAPLDWIFRENLKTVFLGVAMLG
                     FMIWRPSGLLDDWDLDRWLHARLDRWRSRREDPQDGTRPELPSEVEPDDTDVLVVKGV
                     GVSFGGFQALDEVGLEVGRTEVVGVIGPNGAGKTTLLNVVTGLVGSDTGRVELGEVDL
                     TGMPSHQIARRGLVRTFQNLRLFGALTVRENIEVSALVASSTRQHRLPPDIDGLLLVA
                     GLWDVRDRRARELDYGTSRRLELARAVAMAPSFLLLDEPTSGMSDAESLVMVDQVRRM
                     AGVVGAGVVVIDHDLNFITGICDRITCLDRGQVIAVGSAAEVQADPVVQAAYLGSSAE
                     T"
BASE COUNT         1191 a         1929 c         1778 g          950 t
ORIGIN      
        1 ctggtcatct cgatcatcga tcttccctcg gtatctcagt ggtcaagagt ctggtcatcg
       61 gatcgggtcg aggacgaggc ggccccgcac atcgcctgtc cggaggcggt tatgagcctc
      121 ctgggcctgc gacaggccga ggacttctac gtcctgcacg atcgaaggct cgcgtcgggc
      181 gagatccagc aggtcgtcca tctgggcctg cgagccccag aaactggaga ggaaccgggc
      241 ttcgtggggc accgccccga ggccgaacgg gatacgccca ccgaacaagc caacgacagc
      301 aacgaggccc tgccgacgga ccgaggcgcc agccaagacc attgtcgaat ccgcgccgag
      361 gaagtcgaga accacgtcgg cggtccccgg gtcgtcgagg ggaccgcacg atgagtgggc
      421 tcccacctgc agcgccgtcg cctgcttggc cgggtccaag tcgacggcca ccacctcggc
      481 atcggtgagt aagcgcagga agcggatggc gtactggcca agaccaccag cgccgatgac
      541 catggcccgt ggcggctcgc cacggccctg acccctgtcg cgcagcgtcg atagtccatg
      601 atcgacggcc cggtaggcgg tcaagcctcc gcaggccagg ggcgctgcgg cgtaaggatc
      661 gaggccttcc aacggagaca gatagctctc gtcaggcacc cgcatccgct cggcgtaccc
      721 gccgtctgtg aacaagccag cctcagtggc gtccgcacag atctgctcaa gcccatcgga
      781 acactgcggg cacgaccggc aaccccatgg ggcatagagc atgaccgagc caaggcgttc
      841 gtggacgccg gtgacctcat gtcccagaac catgggcagc gggctgggga aatctccatc
      901 gaccacgtgc agatcgctat gacagacgcc gcaggcagtg acggagaacg tggtaccgcc
      961 cggagctgcc acgggctccg ggtggttctc gaccaggcgc aagtcggcac ccaccccatc
     1021 gcaaaccacg gcacgcatca gtagctcctc ggcataccca gaaccttctc gccaagaaag
     1081 gtgaggacca agttgttgct gatgggggcg accttgtaga gccgagtttc ccgcagcttg
     1141 cgttcgatgt cgtattcgac agcgaagccg aacccaccgt gagtgtccaa ggccgcattg
     1201 cctgctgacc acgatgcttc tgaagccagc agtttggcca tgtttgcctc ggccgcgcag
     1261 ggctgaccgg cgtcgaacaa ctcggctgct cgatagcgca tgaggtcggc ggcctgcagg
     1321 tcggcgtatg cccgggcaag agggaactgc acgccctgat tggcgccgat gggacgaccg
     1381 aataccaccc gttccgaggc gtaggcggag gcccgttcaa ggaagaacct gccgtcacca
     1441 atgcactccg ctgcgatcaa gattcgctca gcgttcatac catcaagcac gtggcggaac
     1501 cccatcccct cggtcccgac gagggcatca gcggggagca ccacttcgtc gaagaacacc
     1561 tccgtggtgc tgtggttcat catcgtggga atcggattga tggtgagtcc cgggacgagg
     1621 tcgccggcgg cgtcacgcat ctctacgagg aacaccgaca gcccatcagt gtggtgttca
     1681 cactcgctgg acggtgtagt ccgagccagc aacagcatca ggtcagaatg gagcgcccga
     1741 ctggtccaga tcttctgtcc gttcacctgc cacgtgtcac cgtcacgtac ggcacgggtc
     1801 cgaatactgc cagtgtcgga ccctgctgcc ggctcagtga cgccgaaggc ctggagccgt
     1861 agttcgcccg aggcgatccg gggtagatat cgccgcttct gttcctcgga tccgtggcgc
     1921 agcagggtgc ccatgacgta catctgggca tggcaggcag ctgggttgcc gccgctggcc
     1981 gaaacttcct cgaggaccac cgaggcgccg gtgaggtcaa ggccgccacc gccgtattcc
     2041 tcggggatga gggcccccaa ccagccgtga gcggtcaggt cagcgacaaa ctcctccggg
     2101 taccggtcgg gttcaaggcc gcgccaatag tcacacccgt atcgatcggc caagcgttga
     2161 acttcgatgc gtatgaggtc caggtcgtcg cggccgaccg gttgggcacc ggctatcacg
     2221 gcatcgtctc cctgatgtcg tcgccaaaga aaccacgggc cgccaactgg gcagcagcgg
     2281 cctcgccact ggcctgcagg tggctctcca tggcccgccg ggcgccatcg gcgtcgccac
     2341 tggcgatggc ctccaagatc gccgcatggt gttgaaccgc cgtgtgattc cagccgtccg
     2401 cgaactcgta gtagctggag ggcaccgagt gctcaagatg gcgcagcaac cagcgggtcc
     2461 gacccggtgc cgtcaggttg atgatccgat gaaagtcatg gttcagctgc tgaaggtcgt
     2521 ctggtccgag ttcggatcca gcgtcgagga agcgggtgtg aaccttgcgg agttccgaga
     2581 gcccctcctc gtcgatggtc tccgctgcca gggcggctgc cctcccggac accacgccga
     2641 acagggcgta gtggtcgatg atgtcctccg gcgataggtc agccactgag gccccgcggc
     2701 ggggcgtcaa ctcgacgagg ccttcacggc cgagaactac cagcgcttcg cgaatggggc
     2761 ttcggctaac ccctagggcc tcactgaccg cctgctggtc gattttctcc ccggaccgaa
     2821 tggtgccggt caggatgagc tcccgtacgt agtccacgac ctcctctcca aggacgcccc
     2881 gacgtctgga ggccggcgtc cgctggggat accgtggctc acgcccatca cctttcggct
     2941 ccatgtactc ctccccgtcg cccccggatg gtgggatatc gccactcagg atactttgaa
     3001 tacattattc atttctaact ggccaaacaa cgcgaaggag cgtccgtgcc accacgaccg
     3061 ttgatcggaa tcacggggag gcgcaagaaa ggcgaccagt tggtggggaa cctggacgta
     3121 ctggctgatt tctccgtcga cctctactac gccgattacg ggcggggtgt cctcgaggct
     3181 ggtgggctac cgatccacat cccccttgac gtcgacccgg ccgaactcgt ccctcgcctc
     3241 gatggcgtac tgctaaccgg tggagccgac gtcaaccccc aaaggtatgg ccatgagtca
     3301 tcgactgacg cgttccctcc agaaccactg cgcgacgaac acgagtgcgc tgtgctggac
     3361 gccgcctaca acgaccggat accggtggtc ggcatctgca ggggccttca gatcgtcaac
     3421 atccacgccg gtggcaccct tcatcaggat gttcccagtc acgccggatt cgattcgcca
     3481 gtcacgaccg agtggcacga cgtgacgttc gacgacgaca ccgtcctcgg tggcatctac
     3541 ggcccttacc tcccggtcaa ttcactgcat catcagaccg tggacgaggt gggaagagac
     3601 ttgcgagtca cagcacgctc cggcgatgac tctgtcgaag gcctcgagca tgagaatctg
     3661 cccgtagttg ccgttcagtg gcaccccgag atgctcccaa cccgggcggg cgaccctctc
     3721 ttcgcctggc tggtttcgga agcctcccac ctgcgctaac gagggaccct tccacgtctg
     3781 gaattgtgga cgtcgcccta gcgggacctc aggtctctgc ggaacttcca agataggcgg
     3841 cctggacaac cgggtctgcc tgcacttcgg ctgccgatcc gacagctatg acctggccac
     3901 gatccaagca ggtgatgcgg tcgcagatcc cggtgatgaa attgagatcg tggtcgatga
     3961 ccaccacacc ggcacccacc accccagcca tccgccgaac ctgatcgacc ataactagcg
     4021 attcggcgtc actcatgccc gacgttggct catccaacag gagaaaggac ggagccatgg
     4081 cgacggctcg cgccaactcc aagcgccgtg atgtgccgta gtccaactct cgggctcggc
     4141 gatcacggac gtcccacaag ccagcgacca gcagcaggcc atcgatgtcc ggaggtaggc
     4201 gatgttgccg agtggacgaa gccacaaggg cagacacttc gatattttcc cgaacggtca
     4261 gggcgccaaa taggcgcaaa ttctggaagg tcctcaccag acccctccga gcgatctggt
     4321 gggatggcat gccggtgaga tcgacttcac ccaactcaac gcggcccgtg tccgatccaa
     4381 ccagtccggt gaccacattc agcaaggtgg tcttgccagc accgttgggt ccgatgactc
     4441 cgacgacctc ggttcggccc acttcaaggc ccacctcgtc gagcgcctgg aagcctccga
     4501 aagaaacgcc gacccccttg acgacgagaa cgtccgtatc gtcgggctct acctccgatg
     4561 ggagttccgg tcgagtccca tcttgagggt cctcgcgtcg actccgccac ctatccagac
     4621 gtgcgtgcaa ccagcggtcg agatcccaat cgtccaacag gcccgacggt cgccagatca
     4681 tgaaaccaag catggctacg ccgaggaata ccgtcttcag attctctcgg aagatccagt
     4741 ccaacggcgc gctgtccaga ccaatgccga agaactcgaa gccgtcctga cctaaacgcc
     4801 gcgctaactc ccgacctgcg gtgatgaccg ccacccccag cagggcgccg ctcacgcttc
     4861 ggcgcccccc gacgatgagc atgaccaggg ttaccagagt gagattgaag aagaagtcgc
     4921 ggggcaggat cgaacccctc tcgtaaaccc ggagcccggc ccccattccg actaccgcta
     4981 cggacaacag gagggccacc atctgctgaa cgagcgggtt cactcccatg gcgcgggccg
     5041 cgaggtcatc ctctcgggca gccacggcta gacgaccgcc ccgactccgg gcatagagaa
     5101 gagcggaaag aatggcagcg aggagcgcca ggtacagagg cgctcgggaa tcaagtcccc
     5161 caccgatacg gaacgaaagg ccagcccgat cgcccccggt caggtcaggc cagttccggg
     5221 caacctcgtg ggtcacgaag agcagagcca gagtaatgac agtggccgac acggcgccgg
     5281 actcggcgcc agagcgggct aggccaaggc cgacaactag cgccacgatc aggactacca
     5341 cgagggccag acccatgctc gtccagggtc ctaggtgcac atccgctaag ccgaacggag
     5401 cgtcagcgac ccgcttggct ttctcgactg gcgaaatcgc catcagcgca aaggcatatc
     5461 cagcgatggc cccaaagccg atatgaccaa aggacaggat ccccgtgttc ccgacgtaga
     5521 tctgcagccc taggacgagg acagcatcga taagagccaa ggtgaccagt cgctcttgac
     5581 cccccaactg gccttggtac agaaggccgg cacccacaaa gaggccaaaa aggatcagcc
     5641 cggcggcaac cggtagcagt acgtcacggc gcaggtcggg aaacatcaga ctcgttcagc
     5701 gtggtcgacc gagaccaggc cctggggtcg gaagatgaat agaagagcga tgagtaggaa
     5761 gaccacgccc tcggtaagac tggctatcga gtcgggcaga cgcgaccgca ggagcacttc
     5821 ggccataccc agggcaaagc ccccgacg
//
LOCUS       DASCMR010000287         2966 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001380826, whole genome shotgun sequence.
ACCESSION   DASCMR010000287 DASCMR010000000
VERSION     DASCMR010000287.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2966)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2966)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2966
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001380826"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1932)
                     /gene="secA"
                     /locus_tag="QGG16_06790"
     CDS             complement(<1..1932)
                     /gene="secA"
                     /locus_tag="QGG16_06790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HJP25014.1"
                     /translation="MSVFSRVLRSGEGRKVKALEALVPDINALSDATSALSDDALRAR
                     TSEFRQRYDNGESLDDLLVEAFAVVREASWRVIGQRHYDVQMMGGMALHLGWVAEMRT
                     GEGKTLVSTLPAYLNGISGRGVHLCTVNDYLASRDAEWMGQIHRWLGLSVGLVVPDVR
                     DRAEKRAAYAADITYGTNNELGFDYLRDNMAMAGAEKAQRGHAFCIVDEVDSILIDEA
                     RTPLIISGRLAEAAALYQRFAAVVQGLNAESHYEVDEEKGIIAPTEAGVHAVEAALGV
                     DNLYDQVSSNLVHQFHSALKAKELYKRDKDYIVVDGEVRIVDEFTGRVLEGRRWSDGI
                     HQAVEAKEGVSIKEENQTLATITLQNYFRLYDKLAGMTGTAETEAAELAGIYGLQVVP
                     IPTNRPLARLDQSDLIFKSEAGKFSAVVDDIVERRDGGQPVLVGTVSVENSERLSREL
                     EKRGVDHEVLNAKQHFREADVVAQAGRPGAVTVATNMAGRGVDIVLGGNPENLAEREM
                     KAAGLEPTSRKGQKKYAELLAHHEPECKALGEQVRSNGGLYVLGTERHESRRIDNQLR
                     GRSGRQGDPGESRFYLSLEDDLMRLFASDTMRGVMDRALPEDEAIESKMVTKAIERAQ
                     TTVEQKNAEVRKNVLKYDEV"
     gene            complement(2009..2569)
                     /locus_tag="QGG16_06795"
     CDS             complement(2009..2569)
                     /locus_tag="QGG16_06795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HJP25015.1"
                     /translation="MADSFSRPTAAGATPSASDDDYSILLGERIRVIRRQKRLSLQDV
                     EARSESEFKASVLGAYERGERAVSVPRLRRLAEFYDVPVDQLLPAVLGEVRVEATGDE
                     PPAWVPGQKVVIDLIAMVDASGPEVELIRRYLGIIQVKRQDFNGRVLTIRQDDLQALA
                     AILGTGVDDAAPRLAEMGLLRPAALL"
     gene            complement(2648..>2966)
                     /locus_tag="QGG16_06800"
     CDS             complement(2648..>2966)
                     /locus_tag="QGG16_06800"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR00046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016436 - rRNA (uridine) methyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RsmE family RNA methyltransferase"
                     /protein_id="HJP25016.1"
                     /translation="ERFRRVAREAAMQSRRVWLPQIDEVSAPGDVMVPEGLAVAEHGG
                     DPIDGSVRALLVGPEGGWTTDELVNHRTVSLGQTVLRAETAAIVAGTLLTAIRDGRLW
                     PHA"
BASE COUNT          492 a          983 c          923 g          568 t
ORIGIN      
        1 cacttcgtcg tacttcagga cgttcttgcg gacctctgcg ttcttctgct cgacggtcgt
       61 ctgggcccgc tcgatggcct tggtgaccat cttggattca atggcctcgt cctctggcaa
      121 cgcccggtcc atgacacccc tcatggtgtc cgaggcaaag agacgcatca ggtcgtcctc
      181 tagcgagagg tagaaacggc tctcgccggg gtcgccctgt cgaccgctac gaccccgtag
      241 ctggttgtcg attcgccgcg attcgtgccg ttcggttccc agcacgtaga ggccaccgtt
      301 gctccttacc tgctcaccga gggccttgca ctccggctca tggtgggcca gcagttcggc
      361 gtacttcttt tggcctttgc ggctcgtggg ttccagtccg gccgccttca tttcccgctc
      421 agccaggttc tccgggttgc cacctagaac gatgtccacg cctcgaccgg ccatgttggt
      481 ggctaccgtc acggcccccg ggcgaccggc ctgggcaacc acgtcggcct cgcggaaatg
      541 ctgcttggcg tttagcacct cgtggtccac gcctcgcttc tcgagttcgc gggataggcg
      601 ctcggagttc tcgacgctca ccgttccgac cagcacaggt tggccgccgt cacggcgctc
      661 cacgatgtcg tcgaccacag cgctgaactt gccggcttcg gacttgaaga tcaggtcgct
      721 ctggtccaga cgggccaacg ggcggttggt gggaatgggg accacctgga ggccgtagat
      781 gcctgccagt tcggccgctt cggtctcagc cgttccggtc atgccggcca acttgtcgta
      841 gaggcgaaag tagttctgga gggtgatcgt cgcgagtgtc tggttctcct ccttgatcga
      901 caccccctcc ttggcttcca cggcctggtg gatgccgtcc gaccagcgcc ggccctcgag
      961 tactcggccg gtgaactcgt cgacgatccg gacctcgcca tccacgacga tgtagtcctt
     1021 gtcgcgtttg tagagctcct tggctttcag cgcagaatgg aactggtgga caaggttgga
     1081 cgacacctgg tcgtagaggt tgtcgacacc gagggcggcc tcgacggcgt gcactccagc
     1141 ctcggtggga gcgatgatcc ccttctcctc gtcgacctcg tagtggctct cggcgttcag
     1201 cccctgaacc acggcggcga accgttggta gagcgccgcc gcctcggcta gacggccgct
     1261 gatgatgagt ggcgtacggg cctcgtcgat gaggatcgag tcgacctcat cgacgatgca
     1321 gaaggcatgt ccgcgctggg ccttctcggc gccggccatg gccatattgt cccgcaggta
     1381 atcgaaaccc agttcgttgt ttgtgccgta ggtgatgtcg gccgcgtaag cggcacgctt
     1441 ttcggctcga tcccggacgt cggggaccac caatccaacc gataggccta accaacggtg
     1501 gatctgaccc atccattcgg cgtcgcggct ggccaggtag tcgttcacgg tgcataggtg
     1561 cacgccccgg ccggagatcc cgttgagata ggcgggcaga gtgctgacca gcgtcttgcc
     1621 ttcgccggtg cgcatctcgg ccacccagcc aaggtgtagg gccatgccgc ccatcatctg
     1681 gacgtcgtag tgccgctggc cgatgacccg ccacgaggcc tcgcgcacca cggcgaacgc
     1741 ctccactaga aggtcgtcca ggctctctcc gttgtcgtac ctttggcgga actcagaggt
     1801 acgggcacgg agcgcatcgt cagagagagc ggatgttgca tcactgagcg cattgatgtc
     1861 cgggacgagg gcctcgaggg ccttgacctt gcgaccttca ccgctgcgca gtacgcgcga
     1921 aaacacactc atggtcagat gaggctaccg gtcgacggcc tgccctcagg ggcccgtggc
     1981 gggctaccca ggacctgtcg acggccgatc agagaagagc ggcgggccgt agaagaccca
     2041 tttcggcaag gcggggagcc gcatcatcga ccccggtgcc gaggatggca gccaacgcct
     2101 ggaggtcgtc ttggcggatg gtcaggaccc tcccgttgaa gtcctgacgc ttgacctgga
     2161 tgattccgag atacctccga atgagctcca cctcggggcc cgatgcgtcg accatggcga
     2221 tcaggtcgat gaccaccttc tgacccggca cccatgccgg tggttcgtct cctgtcgctt
     2281 caacccgaac ctcgcccagt accgccggaa gcaactggtc tactgggacg tcgtagaact
     2341 cggctaggcg gcggagacga ggtaccgaga cggcccgttc accacgttcg taggcaccca
     2401 gcaccgaagc cttgaactcc gactcggaac gggcctcaac gtcctgtaga gagagccgct
     2461 tctgacgccg gatgacccgg atgcgttcgc cgagaaggat gctgtaatca tcgtcggacg
     2521 ccgacggggt cgccccggcg gcggtcggac gggagaaaga gtcggccacg ggtcgtgacg
     2581 gtactgaccg cgctccgtgg ttgcaattct gatcagaatc gaccgccaat aggactcaca
     2641 ccgcagatca ggcatgtggc cagagccgtc cgtcgcggat ggccgtgagc agcgtgccag
     2701 ccacgatggc tgctgtctcg gcgcgcagca ccgtctggcc gaggctcacc gtccggtggt
     2761 tcaccagctc atcggtggtc caccctccct ctggcccgac cagcagcgcc cgaaccgaac
     2821 catcgatcgg gtcgccaccg tgctcggcca ccgccagacc ttcaggcacc atgacatcgc
     2881 cgggtgccga cacctcgtca atctgaggca accacacgcg acgcgactgc atggctgcct
     2941 cccgggctac ccgcctgaac cgctct
//
LOCUS       DASCMR010000288         6543 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001381408, whole genome shotgun sequence.
ACCESSION   DASCMR010000288 DASCMR010000000
VERSION     DASCMR010000288.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 6543)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6543)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6543
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001381408"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..718)
                     /locus_tag="QGG16_06805"
     CDS             complement(<1..718)
                     /locus_tag="QGG16_06805"
                     /inference="COORDINATES: protein motif:HMM:NF014193.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SURF1 family protein"
                     /protein_id="HJP25017.1"
                     /translation="MDPGSRRLLRPAWIVSHLLVAGLLVATVNMGFWQLRRLDGRQAY
                     NASVSVRAAEPVLPLVEVLTSIAAGTDPADLRFVRVIVTGVWDTDREVLLANRSRDGV
                     PGVHAVSLLLVDRASLGAASDVGPAGGLVVDRGFVPRQVQVAGDPSVWAPDAGEVVLT
                     GSLDLFRAGERGHGGEVDRIDREALATRWDTTLAPLWLRAAESTGVGTWPAPVPVVDV
                     GDGSHRSYAVQWFVFSIIGIL"
     gene            complement(739..1551)
                     /gene="dapB"
                     /locus_tag="QGG16_06810"
     CDS             complement(739..1551)
                     /gene="dapB"
                     /locus_tag="QGG16_06810"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HJP25018.1"
                     /translation="MGTTDAGLIRVGVLGVAGRMGRAVADAVHDAEGLVLAAAADPSS
                     VGTDVHGVTVVADVDALLAAPADTGLSNKGLDVVIDFTVAEASRVTLPVLAAAGVHAV
                     VGTSGLGDDDLTALRCAFTTSNCVVAPNFAIGAVLMMRFAEMAAPWFDTAEIIETHHD
                     GKVDAPSGTAVATAERMAASSAEWAPDPTTREVVPGARGGVGPADIHIHSLRMRGAVA
                     DQEVVLGTTGQTLTIRHDTTDRASFMPGVVLAVRRIAEVRGVTLGLDALLGL"
     gene            complement(1637..2869)
                     /locus_tag="QGG16_06815"
     CDS             complement(1637..2869)
                     /locus_tag="QGG16_06815"
                     /inference="COORDINATES: protein motif:HMM:NF017044.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HJP25019.1"
                     /translation="MVELSLPEHGPTDGPGVVSEHMPDAHSVSVGVWVGVGGRDEDPA
                     LAGTSHFLEHLLFKGTEDRSARAIAELVDATGGEMNAFTTKEYTAYYARLPVGGQETA
                     VALLADVLREPALRASDVETERQVILEEIHLAADDPDDVVFDLLYEALFPDHTLGREV
                     LGSEASVGALSRDDIAGFHDHWYRAPNLVVAAAGAVDHEALVSQVGEAFAGRTGGLTP
                     ERTKPAVPAVTARRISRPTEADHVAWGWRGLDRKDPRRHALAIGVHVLGGGLSSRLFQ
                     TVREEHGLAYSVFSSMAAYSDAGVVSVYAGTAPERSDELKRVVAHEVGEVAVHGITDA
                     ELSIARDGFEGSLLLGLEGSGSRMSRLGASQSLLGRVVPLDEYVEILRAVTLDEVNTV
                     LAEVLAPDAVVAEVGPTA"
     gene            complement(2951..5434)
                     /locus_tag="QGG16_06820"
     CDS             complement(2951..5434)
                     /locus_tag="QGG16_06820"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HJP25020.1"
                     /translation="MTEATTVSRTFSGTEKTMSFETGRMAPLAGGSVLAKIGRSTVLV
                     TATGAKSPRPGADFFPLTVDIEERMYAAGKIPGSFFRREGRAPESAILTCRLIDRPLR
                     PMFPDGFRNEVHIVGTVVGADMENPHDVLALNGASAALMLSGIPFDGPVGAVRIAWSA
                     AGEWIAHPTYEEGSESAFEMVVAGRLLDDGDVAVMMVEAGGTEATCDVYEAGAPMVDE
                     AVLASGLDFSKQYIREVIELQLEMVAAVGAPEIMAYEVSSDYSDEVFTAVEAAGAERI
                     AATQTIADKAERGTAEAALKAELIAELLPQFADVDNADRQIGGAIRAVTKELVRSRIL
                     TEGVRIDGRGTGDLRPVSSEVAIVPTAHGSGLFQRGETQVLNFTTLGTGRMDQMIDGI
                     DPIDRKRFMHHYNFPPFSTGETGFMRGPKRREIGHGALAERALFPIIPSFEEFPYTLR
                     LVSEVLASNGSSSMGSVCSSSLSMMDAGVPIKAPVAGIAMGLICKDGEYVTLTDILGA
                     EDAFGDMDFKVAGTAEFVTALQLDTKIDGIPADVLAAALNQAKEARLAILEVMADAIP
                     APRDDVGESAPKIEAFEIPVEKIGEVIGPKGKMINTIQAETGADISVDDDGMVGIVSI
                     ASPDRAKVAEAKRQVMLIVDPPTAEVGAVYEGRVVNITKFGAFVSILPGRDGLVHISK
                     LGAGKRIDKVEDVLELGQPLTVIVEDVDPNGKISLKPAGDGPAASSKDEAAGGSDAPA
                     TAPDQDDSSDDDDAPVDSFEDDVNDGDYAGGGDNFDEDDSFDDDDAPVVASFEDAFKA
                     ELETVHGDLGAAAPTNRGGGGGGGRRRRR"
     gene            complement(5614..5883)
                     /gene="rpsO"
                     /locus_tag="QGG16_06825"
     CDS             complement(5614..5883)
                     /gene="rpsO"
                     /locus_tag="QGG16_06825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HJP25021.1"
                     /translation="MPTNLPPKGATIETNRLHESDTGSPEVQIALLSDRINHLTDHLK
                     VHKKDHHSRRGLLMLVGRRRRMLDYVKKNDVERYRAIIAKLGLRR"
     gene            6037..6453
                     /locus_tag="QGG16_06830"
     CDS             6037..6453
                     /locus_tag="QGG16_06830"
                     /inference="COORDINATES: protein motif:HMM:NF013098.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HJP25022.1"
                     /translation="MSARFTHLALPSHDLDATVAWYETHTPMRAFHRRTDPDAEVAWL
                     AEDDNAVGIVVVQTLEDHKAGQPLPILTPFAHLGFDVDSPGEVDQAAELGRASGCLHW
                     EPANHPPPVGYLCAVTDPDGNVVEFSFGQGLGAVGD"
BASE COUNT         1139 a         2252 c         2111 g         1041 t
ORIGIN      
        1 cgaggatccc gatgatcgag aagacgaacc actggacggc ataggagcga tgggagccgt
       61 ctcccacgtc gaccaccggc accggggccg gccaagtgcc gacaccagtc gactcggcgg
      121 cccgtagcca caagggggcc aacgtggtat cccagcgcgt cgccagcgcc tcccggtcaa
      181 tgcggtccac ctcgccgccg tggccccgct cgccggcccg gaataggtcc aacgaaccgg
      241 tgaggacgac ctctccggca tctggagccc agacgctcgg atcgcccgcc acctggacct
      301 ggcgcggcac gaatccccga tctacgacca gtcccccagc cgggcctaca tccgaagcag
      361 cgccgaggct ggctctgtcg accaggagga gcgacacggc atggactccg ggcaccccgt
      421 cccttgaacg attggccagc agaacctcgc ggtcggtgtc ccacaccccg gtgacgatga
      481 cccgcacgaa acgaaggtcg gcgggatcgg tgcccgcggc gatcgacgtc aggacctcaa
      541 ccaggggaag caccggttcg gcggcccgaa ccgacaccga ggcgttgtag gcctgccgac
      601 cgtcgagacg gcggagctgc cagaagccca tgttgacagt agccaccaac agcccggcca
      661 ccagcaggtg cgaaacgatc cacgccggcc gtagcaggcg acggctaccc ggatccacgg
      721 tcggaactcc ggctcagatc agaggcccag gagggcatcc aggccgaggg tcacgccgcg
      781 gacctcggcg atgcgtcgga cggccagcac cacgccgggc atgaacgagg ctcgatcggt
      841 ggtgtcgtgc cggatggtca gggtctgccc ggtggttccc agcacaacct cctggtcggc
      901 aacggcgccg cgcatgcgga ggctgtggat gtggatgtcc gccggcccga ccccgccacg
      961 ggcccccggc accacctcgc gggtggtcgg atcgggcgcc cattctgcgg aggatgcggc
     1021 cattcgctcg gcggtggcca ccgctgtccc agacggggca tcgaccttgc cgtcatggtg
     1081 ggtctcgatg atctccgctg tgtcgaacca tggagcggcc atctcggcga aacgcatcat
     1141 gagcaccgca ccaatggcga agttgggggc caccacgcag ttgctcgtgg tgaaagcgca
     1201 gcgcagagca gtcaggtcgt cgtcacctag gccgctggta ccgaccacgg cgtgcacccc
     1261 ggcagcggct agcacgggga gggtgacccg gctggcctcg gccaccgtga agtcgatcac
     1321 cacgtcaagg cccttattgg acagacccgt atcggccggt gctgcgagca gcgcatcaac
     1381 atcagccacc acggtgacac cgtggacgtc ggtacccacc gacgacgggt cagcggccgc
     1441 ggccagcacc agaccctcgg catcgtgcac agcatcagct acggcgcggc ccatacgtcc
     1501 ggccacgcca agtaccccga cgcggatcag cccggcatcg gtcgttccca tggatccgag
     1561 gctatcggtc gccgacccgc cgctctggaa gcgtttccac ctcagcccca tccttcgaga
     1621 ccaggacatc acccgttcag gcagtgggtc cgacctcggc caccacggcg tcgggggcca
     1681 gaacctcggc cagcacggtg ttgacctcgt caagggtcac ggcccgcagg atctcgacgt
     1741 actcatccag cgggaccacc cgacccagaa ggctctggct ggcacccaga cgcgacatcc
     1801 ggctgcccga accctcgagg cccagcagga gcgaaccttc gaatccatcg cgggcaatgg
     1861 acagttcagc atcggtaatg ccgtggaccg ccacctcgcc tacctcgtgg gccaccacac
     1921 gcttgagctc gtcggaccgc tcaggtgccg taccggcgta caccgacacc acgccggcgt
     1981 ccgagtaggc ggccattgac gaaaacacgc tgtaggccag cccgtgttcc tcgcgcaccg
     2041 tctggaacag gcgactggac agtcccccac ccagcacgtg tacgccaatg gccagcgcgt
     2101 gccttcgcgg atccttgcgg tccaggcccc gccaacccca ggccacgtgg tcggcctcgg
     2161 tcggacggct gatacgtcga gccgtcaccg ctggtactgc cggcttggtt cgttccggcg
     2221 tcaaaccacc ggtccgaccg gcgaacgcct cacctacctg agacacgagc gcctcatgat
     2281 caacagcgcc agcggcggcc accaccagat tgggggcgcg gtaccagtgg tcgtggaacc
     2341 cggcgatgtc atctcgactc agcgctccca ccgatgcctc cgaacccaga acctcccggc
     2401 ccaacgtatg gtcgggaaac agcgcctcgt agagcaggtc gaagacgacg tcatctgggt
     2461 cgtcggccgc caggtggatc tcttcgagga tcacctgccg ttcagtctca acgtcggaag
     2521 cccgtagggc gggctcacgc agcacgtcgg ccaacagggc cacggcggtt tcctggccac
     2581 ccaccggaag acgggcgtaa tacgccgtgt attccttggt ggtgaaggca ttcatctcgc
     2641 cgccggtggc gtccaccagc tcggcaatgg cccgcgccga gcggtcctcg gtgcccttga
     2701 acagcaggtg ctccagaaag tgcgaagtac cggccagtgc cggatcctcg tcacggccac
     2761 cgacgcccac ccacacgccg accgagaccg agtgggcgtc cggcatgtgc tcggacacca
     2821 cacccggtcc atcggtcgga ccgtgttcgg gcaggctcag ttcgaccacc gaaccggtgg
     2881 tcgtgtcggc accacgaggg cgccgggggt caacgggtcc gtcgtgcagg acggaccgac
     2941 gatccggtgc ttagcggcgg cgtcgacggc caccgccgcc gccgccaccg cggttggtcg
     3001 gggcggcggc gcccaggtcg ccgtggaccg tctcgagttc agccttaaag gcgtcctcaa
     3061 agctggccac gaccggagcg tcatcgtcgt cgaacgaatc gtcctcatcg aagttgtcgc
     3121 cgccgccggc gtagtcgccg tcgttcacgt cgtcctcgaa agagtcgacc ggagcgtcat
     3181 cgtcgtcgga cgaatcgtcc tggtccggcg cagtcgcggg ggcgtcggag ccacccgcag
     3241 cctcgtcctt tgacgatgct gcgggaccgt cgccggccgg cttgagtgag atcttcccat
     3301 tgggatcgac gtcctcgacg atcaccgtca ggggctgacc cagctccaga acgtcctcca
     3361 ccttgtcgat acgcttgccg gcaccaagtt tggagatgtg cacgaggccg tcacggcccg
     3421 ggaggatgct gacgaaggca ccaaacttgg tgatgttcac cacgcggccc tcgtaaacgg
     3481 cgccgacctc ggcggtcggc ggatccacga tcagcatgac ctgacgcttg gcctcagcca
     3541 ccttggcccg gtccggcgag gcgatcgaca cgatgccgac catcccgtcg tcgtccacgc
     3601 tgatgtcggc acccgtctcg gcctggatgg tgttgatcat cttgccctta gggccgatga
     3661 cctcaccgat cttctcgacc gggatctcga aggcctcaat cttcggggcg ctctcgccga
     3721 cgtcgtcgcg cggggcggga atggcgtcgg ccatgacctc gaggatggcc agacgggctt
     3781 ccttggcctg gttcagcgcg gcagccagga cgtcggcggg aatgccgtcg atcttggtgt
     3841 cgagctgaag ggcggtcacg aactcagccg tgcctgccac cttgaagtcc atgtcgccga
     3901 atgcgtcctc cgctccgaga atgtcggtga gggtgacata ctcgccgtcc ttgcagatga
     3961 ggcccatggc gatacctgcc accggggcct tgatcggtac gccggcgtcc atcatcgaga
     4021 ggctcgacga acacaccgaa cccatcgagc tggagccgtt ggaggccaga acctccgaca
     4081 ccagacgcag cgtgtagggg aactcctcga agctcgggat gatcgggaac agggcacgct
     4141 cggcgagcgc accgtggccg atctcacgac gcttcggacc ccgcatgaaa ccggtctcac
     4201 cggtcgagaa gggcggaaag ttgtagtggt gcataaaccg cttgcggtcg atcgggtcga
     4261 tgccgtcgat catctggtcc atgcggccgg tgcccagggt ggtgaagttc agcacctggg
     4321 tctcgcccct ctggaacagg ccggatccat gcgccgtggg gacgatcgcc acctccgacg
     4381 agactggccg gaggtcgccc gtgccgcgcc cgtcgatacg aacaccttcg gtgaggatgc
     4441 gtgaccgcac cagctccttg gtgaccgccc ggatggctcc accgatctga cgatcggcgt
     4501 tgtccacgtc ggcgaactgc ggaagcagct cggcgatcag ctcagccttg agggccgcct
     4561 cggcggtgcc gcgctcagcc ttgtcggcaa tggtctgggt cgcggcgatc cgctcggcac
     4621 cagcggcctc gaccgcggtg aacacctcat cggaatagtc gctcgagacc tcgtaggcca
     4681 tgatctcggg tgcacccacc gcggccacca tctccagctg gagctcgatg acctcacgga
     4741 tgtactgctt ggagaagtcc aggccactgg ccaggacagc ctcgtcgacc atcggggcgc
     4801 cggcctcgta gacgtcgcag gtggcctcgg tgccaccggc ctcgaccatc atgaccgcga
     4861 cgtcgccgtc gtcgagcaga cgaccggcga ccaccatctc gaaggcggac tcgctgccct
     4921 cttcgtaggt cggatgggca atccactcgc cggcggccga ccaggcgatg cgcaccgcgc
     4981 cgaccggacc atcgaacggg atgcccgaca gcatgagggc tgccgaggcg ccgttcaggg
     5041 ccaggacgtc gtgggggttc tccatgtcgg cgcccaccac ggtgcccacg atgtggacct
     5101 cgttgcggaa cccatcgggg aacatcggcc gcaacgggcg gtcgatcagg cgacaggtca
     5161 gaatcgccga ctcgggcgcc cgaccttcac gacggaagaa cgagccgggg atcttgcccg
     5221 ccgcgtacat ccgctcttca atgtcgaccg tcaggggaaa gaagtccgcc ccgggacggg
     5281 gggacttggc gccggtggcg gtcaccagca ccgttgaacg gccgatcttg gccaatacgg
     5341 atccgccggc cagaggggcc attcggcccg tctcgaacga catggtcttt tcggtcccgc
     5401 tgaatgtgcg ggaaaccgtg gttgcttcag tcatgttctc tcttctcgta gaccatccgg
     5461 aacgactccg gacggttcga tggccgcgga tgcggcacgt tggggagtgg gcgcggcgcg
     5521 ccgtccccgt tcatcgatct ggttgtcggt cccgtggatc cggtccccga cgcgactcgg
     5581 gtggcccgta ggccactcga aatctgattc gacctaacgg cgcaggccca acttggcgat
     5641 gatcgcccgg tagcgctcga cgtcgttctt cttaacgtag tcgagcatcc gccggcggcg
     5701 acccaccagc atcaacaggc ctcgccgact gtgatgatcc ttcttgtgga ccttcaggtg
     5761 atcggtgaga tggttgatgc ggtcgctcag gagtgcgatc tgcacctcgg gagaaccggt
     5821 gtcactctcg tgcaaccggt tcgtctcaat ggtggcgccc ttgggaggca ggttggtcgg
     5881 catcggaacc tcgggtatcg gacccggcct catggcacgc tgtgcgtcgc ctgaagccat
     5941 acggagggtc ggagttcttc gattccgacc ctggacgacc ccggtcgggt cctccacgga
     6001 gaaacagggt accggcgcgg taggtattct caccctatga gtgcacggtt cacccacttg
     6061 gcactgccgt cccacgacct ggacgccacc gttgcatggt acgaaaccca tacgccgatg
     6121 cgggccttcc atcggcggac cgacccggac gccgaggtgg cgtggttggc cgaggacgat
     6181 aacgctgtgg ggatcgtggt tgtccagacg ttggaggacc acaaagccgg tcagcctctt
     6241 cccatcctga ccccgttcgc ccacctgggc ttcgacgtgg actcacccgg agaggtcgac
     6301 caagcggccg aactggggcg agcgtcgggt tgtctgcact gggagccagc gaaccaccca
     6361 ccgccggtcg gctacctctg tgcggtgacc gatcccgacg gcaacgtggt cgagttcagc
     6421 ttcggccagg gcttgggcgc ggttggcgac tgacgaccat ccccggttcc cgaacccgat
     6481 cacatccccg gttcccgaac ccgatcagga gtcgatcttc aggagcccag cacggcgagt
     6541 aga
//
LOCUS       DASCMR010000289         4210 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001382411, whole genome shotgun sequence.
ACCESSION   DASCMR010000289 DASCMR010000000
VERSION     DASCMR010000289.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4210)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4210)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4210
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001382411"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..289)
                     /locus_tag="QGG16_06835"
     CDS             complement(<1..289)
                     /locus_tag="QGG16_06835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase"
                     /protein_id="HJP25023.1"
                     /translation="MEHQLKEPVREEMDWPIYGTAVRELAQMVADDGYRPDMILSIAR
                     GGLFVAGSLGYALAVKNLYVMNVEYYTGVDERLDIPVILPPYVDWVDLGDKK"
     gene            complement(408..2105)
                     /locus_tag="QGG16_06840"
     CDS             complement(408..2105)
                     /locus_tag="QGG16_06840"
                     /inference="COORDINATES: protein motif:HMM:NF013015.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase Y family protein"
                     /protein_id="HJP25024.1"
                     /translation="MGGSAVTSAAVRTLVVGCPDWPLVALGVASDESALVLGAGRVVA
                     ATGPARAVGVALGQRRREAQFLCPEVRVLARDEGQEARRFEAVVSALGTVTPWVEARR
                     PGRCSFGVRGPVRLFGGESALVRHTAEVVDAAVARIGAGVPVGAATGPGCQIGMADGA
                     FAADLAARSGGAAPEHSVIVPRGGSPAFLGPIPVGVLLPVGSSVGSADGSSDLVDVLI
                     RLGLTTLGAFAALPVADVLARFGTDGLDAHRLASGIDDRPVGHRPAPPDLAVSMAFDP
                     PVDRIDRVAFAARSAAEALHERLSARGMACTRVVVEAETEHGQRVSRRWRDEGVLGSV
                     AVADRVRWQLEGWLHGPPAVRPTSGITRLVLAPDEIVPASGRQLGFWGGVSAADERAG
                     RACARVVGLMGPGSVRIPEWRGGRDPDDRVVLTPFVEPLGEGGSVNCPGRGGKPEVEP
                     WPGALPGPSPAAVHLEPVVIDVVDAAGAPVGVDGRSRLSAPPDRLIVPQPPVGSRPVV
                     APGERVVAWAGPWPVDERWWDPLRRRRRVRLQVVTADGTALLVVLTDGRWTVAATYD"
     gene            complement(2116..2928)
                     /locus_tag="QGG16_06845"
     CDS             complement(2116..2928)
                     /locus_tag="QGG16_06845"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25025.1"
                     /translation="MFDTGDVSHPLPRSLLAEAEPFDDLLPEEAFPGDSSPGEVGSRP
                     VLWAVPSLAEAARRVRTTTLAVDRALPVLEALDGLLPDGLRRGVTVEVSGTGARSVAL
                     ALMARATGTGSWAVVVGDGDLGLAAAAEVGVALERLVVVDAPGREQWAPVVATFVGAV
                     DLVLVSPRHRPSIGDVRRLAARCRERGSVLVRLSSESSGFPGVSRLVGDWPGRLDLRF
                     SVDEAVWDGPHGGQGRLRSRRVEISVTGRGLPTEGRRDTLLLPGPSGVPAHP"
     gene            complement(2963..>4210)
                     /locus_tag="QGG16_06850"
     CDS             complement(2963..>4210)
                     /locus_tag="QGG16_06850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25026.1"
                     /translation="GWSAAAALLASFAVLGLAWHRPRLRELAVGRVVGSGLASIGTPV
                     GVAARWIVGFGAVVVVTAGLVGVDDVAANLAPVTVYVAFWVAVPMIVVLVGPWWSSVS
                     PWEAAFRFVDRLRVGRKGRTEVLLAGRYDGWLAVVPVAAFLWLELVYHDGARPRVLGW
                     AGLGYTVGLVGMALRWGTGVARRSEGFGVLFGLLARLSPIGRAPETGRPVIRLPLVGA
                     AVDDLRPSEVALLLVVLGGTAFDGVSRTRFWGDVSAGHTGWGATAVGTVGLVWVVVVV
                     AVAWQVAARLGDHLTGGAGFSTRFGHSLLPIVIGYHVAHYFSLLVLEGQQLGIRASDP
                     YGRGWDLFGTAGDAVNWTRVSPATVGWVQLGAIVAGHLGGVLLAHDRSIESWRPSLAL
                     RSQYPLLMVMVVYTVLGLVLMTG"
BASE COUNT          822 a         1669 c         1239 g          480 t
ORIGIN      
        1 tcttcttgtc gcccaggtcc acccagtcga catagggcgg caaaatcacc ggaatgtcga
       61 gacgctcgtc gacgccggtg tagtactcga cgttcattac gtagaggttc ttgacagcca
      121 gtgcgtagcc cagcgagccg gccacgaaga ggccaccccg ggcaatggac agaatcatgt
      181 cgggccggta gccatcatcg gccaccatct gtgccagttc gcgaaccgcc gtgccgtaga
      241 tcggccagtc catttcctcg cgtaccggtt ccttcagttg gtgctccact gccacgtccg
      301 ctccgtcctc cgtgctcgtg gccgggaaac ctacccgttg agcgaccgat cggccggagc
      361 cgggtcaggg cgcccgggca tcaattccgg tcgttggtca cgaactgtca gtcataggtg
      421 gcggcgaccg tccaccggcc atcggtcagc accaccagga gggccgtgcc gtcggccgtc
      481 accacctgaa gccggacccg gcggcggcgt cgcaggggat cccaccaacg ttcgtcgacc
      541 ggccacggcc cggcccatgc cacgacccgc tcccccggag ccacaaccgg acgagaccca
      601 acgggtggct gcgggacgat cagacggtca ggcggcgccg agagcctgct tcgtccatcc
      661 acacctaccg gtgcccctgc ggcatccact acatcgatga ccaccggctc gagatggacc
      721 gccgccgggg acggtcccgg tagggcacct ggccagggct ccacttccgg cttccctccc
      781 cttcccgggc agttaaccga tccgccttcc ccaagcggtt cgacgaacgg cgtgaggacc
      841 accctgtcgt cgggatcccg tccgccccgc cactccggaa tcctcaccga ccctggaccc
      901 atcaacccca ccacccgggc gcacgcccgc ccggcccgct catcggccgc cgagacccca
      961 ccccagaacc ccaactggcg gcctgatgcc gggacgatct catcgggggc caacaccaac
     1021 cgcgtgatgc ccgacgtggg gcgaaccgcc ggaggaccgt gcaaccatcc ctccaactgc
     1081 caccggaccc tgtcagccac cgcgaccgaa cccagcaccc cctcgtcacg ccaacggcgg
     1141 gacacccttt ggccgtgttc ggtctcggcc tcgaccacca cccgggtaca cgccatcccc
     1201 cgagccgaaa gccgctcgtg gagagcctca gcggcagatc gggcagcaaa ggcgactcgg
     1261 tcaattcggt ccaccggtgg gtcgaaagcc attgacaccg ccaggtccgg tggcgctgga
     1321 cgatgaccca ccgggcggtc atcgatccct gaagccagac ggtgggcgtc aaggccgtcg
     1381 gtaccgaatc gggccagcac atcggctacc gggagggcgg cgaacgcccc cagggtggtc
     1441 aaacccagac ggatcaggac gtcaacgagg tccgaggacc cgtccgccga cccaactgac
     1501 gacccgactg gtagcagcac cccgacaggg atggggccca ggaaggccgg actcccaccc
     1561 cggggaacga tcaccgagtg ctccggagcc gccccaccgc tacgggccgc caaatcagcg
     1621 gcgaatgcgc catcggccat cccgatctga caccccgggc ccgtagccgc acccaccggc
     1681 acccctgctc cgatccgagc aacggcggcg tccaccacct cggcggtgtg gcgcaccaag
     1741 gccgactccc caccgaatag tcggaccgga ccccggaccc cgaacgaaca tcgaccaggt
     1801 cgccgggcct ccacccacgg ggtaaccgtc ccgagggccg agaccacagc ttcgaacctc
     1861 cgggcctctt ggccctcgtc acgggctagc acccggactt ccgggcagag gaactgagcc
     1921 tcacgtcgac gctgccccag agccaccccg acggcccggg ccggcccggt ggccgccacg
     1981 acccgccccg ccccgagcac cagcgccgat tcgtcggagg ccacccccaa cgcgaccaag
     2041 ggccagtcgg gacaacccac cacgagggtc cgaacggcgg ccgaggtcac agccgacccg
     2101 cccaccagcg gagggtcacg gatgagcggg aacgccgctc gggcccggga ggaggagcgt
     2161 gtcccggcgt ccctccgtcg ggagaccccg accggtgacc gatatctcca cccggcggga
     2221 ccggagacgg ccctgccccc cgtggggccc gtcccagaca gcctcatcga ccgaaaaccg
     2281 gaggtccagg cggcccggcc agtcgccaac caaacggctc accccgggaa accccgacga
     2341 ctccgaggat agacggacca gcactgaccc ccgctcccga caacgggctg ccaggcgtcg
     2401 aacgtcacct atcgacggcc ggtgcctggg cgagaccaac accaggtcga ccgcccccac
     2461 gaaggtggcc accaccgggg cccactgctc ccggcccggg gcgtccacca ccacgagacg
     2521 ttccagtgcc accccgacct cggccgctgc ggcaaggccc agatcaccgt caccgaccac
     2581 cacagcccac gacccggtcc cggtggcccg agccatcaga gcgagggcca ccgaccgggc
     2641 cccggtgccc gacacctcca cggtgacgcc ccgccggagg ccgtcgggca ggaggccgtc
     2701 gagagcctca agcaccggga gggcccgatc cacggccagc gtggtcgtcc ggacccgacg
     2761 ggctgcctcg gccagagacg gcacggccca cagcaccggc ctcgacccga cctctcccgg
     2821 ggagctatcc cccggaaaag cctcttccgg caacaggtca tcgaagggct cggcttcggc
     2881 taggaggctc cggggaaggg gatgggacac atccccagta tcgaacatat gttcgattag
     2941 agcaaggggt tctcttcctc ggtcaacccg tcatcaggac cagaccgagc accgtgtaca
     3001 cgaccatcac catcaacagc gggtactggc tacgcaaggc gagcgacggc cgccacgact
     3061 caatcgaacg gtcgtgggcc aggagcaccc caccaaggtg gccggccacg atcgccccaa
     3121 gttgtaccca ccccacggtg gccggggaga cccgagtcca gttcaccgcg tcgccggccg
     3181 taccgaatag atcccatccc ctcccatagg ggtctgacgc ccggattccc aactgctgcc
     3241 cctcgaggac caacagagag aagtagtgag ccacgtgata gccgatcacg atgggcaaca
     3301 acgagtgacc gaaacgcgtc gagaatcccg ccccaccggt cagatgatct cctagccggg
     3361 ccgccacctg ccaggcaaca gcaacaacaa caaccaccca gacgagcccc accgtgccta
     3421 ccgctgtggc accccacccg gtgtggcccg ccgagacatc accccagaac cgagtcctcg
     3481 acacgccgtc gaaggctgtc ccccctagta ccaccaggag gagtgcaacc tccgatggcc
     3541 ggagatcatc taccgcggca cccaccagcg ggagccgaat gaccggacgg ccggtctccg
     3601 gcgcccgtcc aatcggcgac agtcgagcca acagtccgaa cagcacacca aatccctcgg
     3661 accgccgggc cacaccggtt ccccaccgga gggccatccc caccagcccc accgtgtaac
     3721 caagccccgc ccaacccagc acccggggac gggctccatc gtggtacacg agctcgagcc
     3781 acagaaacgc tgccaccggt accacggcca gccagccgtc gtaccgtccg gcgagcagga
     3841 cctctgttcg tcccttccgg ccgactcgga gccggtcgac aaaccggaac gccgcctccc
     3901 acggactgac cgaggaccac cacggcccga ccagcaccac aatcatcggc acggccaccc
     3961 agaaggccac gtacaccgtg accggagcca gattggcggc cacatcgtcg acccctacta
     4021 ggccggcggt gaccacgacc accgctccga atcccacgat ccaacgcgcg gcgaccccaa
     4081 ccggggtgcc gatcgaagcc aaccccgacc ccacgactct cccgacggcc aactcccgga
     4141 gccgtggccg atgccacgcc agtccgagga cggcaaagga agccagcaga gccgccgcgg
     4201 ccgaccatcc
//
LOCUS       DASCMR010000290         4909 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001391126, whole genome shotgun sequence.
ACCESSION   DASCMR010000290 DASCMR010000000
VERSION     DASCMR010000290.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4909)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4909)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4909
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001391126"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(54..545)
                     /locus_tag="QGG16_06855"
     CDS             complement(54..545)
                     /locus_tag="QGG16_06855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25027.1"
                     /translation="MALRIFLTVLVVAMGVLWFYAFFLAPSGNPDRMEDRSWPETAQV
                     LCLDAHVDLALLPTARQADTPAERAGDLDEATVIVRRLVDDLGRIPGGTAHDRSLVAL
                     WLADWEIYLTDRVNHAERLRTEGDVKPLLTALPSGAGSVLERMNGFARANDFEACLDP
                     GDM"
     gene            complement(590..3301)
                     /locus_tag="QGG16_06860"
     CDS             complement(590..3301)
                     /locus_tag="QGG16_06860"
                     /inference="COORDINATES: protein motif:HMM:NF013106.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HJP25028.1"
                     /translation="MSRHPTCSERARRSVGLKLVCSLVATAILSTSCYKYETREFEIT
                     IPEQAESSVVVARDGRPITTLVAPENRTSARTLFEIPRMVRDAVIAIEDERFYVHDGI
                     DLKAIIRAARTNLEAGGISQGGSTITQQYVKLAIIRNAEQTASRKLEELWYATRLEDQ
                     YSKNFILLQYLNTVYLGHGAYGVKAAAQTYFNKDITQVNLAEAAMIAGIIQLPGRYNP
                     YLNYSKSLRRSHLVLDRMLANEFITEEQHTEAMANPPRLEEYSARLETRYPAGHFVEE
                     VRRWFLDNPAFGASRGVRERLLFEGGLRIETTVDLDLQRSAEAAVEAHLPANQGHPDA
                     AVVVLETGTGQVLAMVGGRDFFATDSDAKVNLAVGSGRQVGSSMKPVALAAALEAGWQ
                     ATATYPAPNVLEFEIAGADEDNKVWRVTGGVGGHDATEARFEHGLQALLQFWMREDHT
                     DVPAEHVETIRVEKERDGETEVTYEAVDLTQWVANRRWDFDRERLFADRIEMLEAIPT
                     WTWEPPDGQALVPPVDAEEVTLIRATRSSLNTVFAQLSVEMGSQRTVNMARRLGIRSP
                     IQNVNSNVLGTSNTTMLDMATAYHTFANRGVSIAPSYVTRVARADGTTLWSWTRTQTR
                     VLDARLADQVSWILEGTIDQGTGWRAQLEGRPAAGKTGTTQNYADAVFAGYTPQRTTA
                     VWVGFPEAQIPMIPPTTDRKVYGGTYPAMIWKDVMEAAHFGLPSEDFPAFSPVNTVFV
                     APRPLAPEEPAVDLAATTTVPAGHLATPELAGLTLDNARAMLAEADHGIWIAEIREVE
                     VSGTEAGTIIGQEPAIGSTIEMGSTMLVEVAVEPPVLDGVNVPDVTYRLFSEARPTLE
                     ALGLGFSVIVVADPDKPEWEPGLIWSQEPAPGTVVNPGAVLELRVTP"
     gene            3431..4753
                     /gene="tyrS"
                     /locus_tag="QGG16_06865"
     CDS             3431..4753
                     /gene="tyrS"
                     /locus_tag="QGG16_06865"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR00234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004831 - tyrosine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006437 - tyrosyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HJP25029.1"
                     /translation="MSTTILDDLAARGLIRDSTDIDDLRRRLGEGPVTLYCGFDPTAD
                     SLHIGHLVPLLLLRRFQDAGHRPIALAGGATGMVGDPSGRSAERNLLDGPTLNHNVDA
                     VAVQLRSFLRFEGDLLPGDASALLVDNRDWTEGVGVLEFLRDVGKHVTVGTMLGKESV
                     RARLAGDQGISFTEFSYMLLQANDFYELHARHGCELQVGGSDQWGNITAGIDLIRRRV
                     GAPAHGLTVPLVTRADGAKFGKTDDGAVWLDPARTLPYELHQYFVNVDDQDVERFLLQ
                     LTLVAVDDVAAVMAEHASAPEQRLAQNRLADEVCNLVHGSDATERARLAATGLFGSEA
                     PTAAVLDALRGIVPETSVGAGTLVGGESLVDALEATGLCSSRGDARRTIAGGGVRVNG
                     QRVGTEVTALPDEAVVGGRFVLLQKGKRQRHLLLIEGPGDGPADGPTV"
BASE COUNT          767 a         1503 c         1714 g          925 t
ORIGIN      
        1 ttccagaatc cctacatgtc tccggggtct ccctacatgt ctccggggtc tccctacatg
       61 tctccggggt cgaggcaggc ctcgaagtcg ttcgcccggg cgaaaccgtt catacgttcc
      121 agcacgctgc ccgcgccact ggggagggcg gtaagcaggg gtttcacatc tccctctgtt
      181 cggagtcgct cggcgtggtt gacccggtca gttaggtaga tctcccagtc ggccaaccac
      241 agtgcgacca gtgatcggtc gtgggccgtg ccaccgggga tccgaccgag gtcgtcgacc
      301 agtcgccgga cgatcaccgt ggcctcgtcg agatcgccgg cccgctccgc cggggtgtcg
      361 gcctgacggg cggtggggag gagggctaga tcgacgtggg catctagaca gagcacctga
      421 gcggtctccg gccaggaccg gtcttccatc cggtcggggt tgcccgatgg ggcgaggaag
      481 aaggcgtaga accagaggac gcccatggcc accacgagga cggtcaggaa gatccggagg
      541 gccattttgg ctcgtccggt cggagatggc ttggtcgcgg tcaacacggt cacggagtca
      601 cccgcaactc gaggaccgcg cccgggttga ccacggtgcc aggtgcgggt tcctgggacc
      661 agatgagccc tggctcccat tcgggtttgt cggggtcagc caccacgatg accgagaagc
      721 ccagaccgag ggcctcgagg gttggtcgag cctcggagaa gagccggtaa gtgacatcgg
      781 gaacgttcac tccatcgagc accggtggtt cgacggccac ctcaacgagc atcgtgctac
      841 ccatctcaat ggtcgatccg atagccggtt cttggccgat gatggtgccc gcctcagtgc
      901 ccgacacctc aacctcgcgg atctcggcga tccagatgcc gtggtcagcc tcggccagca
      961 tggctcttgc gttgtccagg gtcagcccag ccagctccgg cgtggccaga tggcccgccg
     1021 gcacagtcgt cgtcgcagcg aggtcaactg ctggctcttc tggggcaagc gggcgcggag
     1081 cgacgaacac ggtgttgacc ggggagaagg cggggaagtc ctcgctggga agaccgaagt
     1141 gggcggcttc catgacgtcc ttccagatca tggccgggta ggtccctccg tagacctttc
     1201 ggtccgtggt cggtggaatc atggggatct gggcctcggg gaaaccaacc cacaccgcgg
     1261 tggtgcgttg tggggtgtag ccggcgaaga cggcgtcggc atagttctgg gtggttcccg
     1321 ttttaccggc agcgggccgg ccctccagct gcgcccgcca gcctgtgccc tggtcgatgg
     1381 ttccctcaag gatccacgac acctggtcgg ccagacgggc atccaatacc cgggtttggg
     1441 tacgggtcca cgaccagagg gtggtgccgt cggcccgcgc cacccgggtg acgtagctgg
     1501 gagcgatcga gaccccccgg ttggcgaacg tgtggtacgc ggtggccatg tccagcatgg
     1561 tggtgttgga ggtcccgagc acattggagt tgacgttctg gatgggggac cggatgccga
     1621 gtcgccgggc catgttgacg gtccgttggg agcccatctc gacgctcaac tgggcgaaga
     1681 cggtgttcaa cgaacttcgg gtggctcgga tgagggtcac ctcttcggcg tcgactggtg
     1741 ggacgagggc ctgcccgtcg ggcggttccc atgtccaggt cgggatcgcc tccagcatct
     1801 cgatccggtc ggcgaacagg cgctcccggt cgaagtccca tcgtcggttg gccacccact
     1861 gtgtgaggtc cacggcttcg taggtcacct cggtctcgcc gtcacgttcc ttctcgacgc
     1921 ggatcgtctc gacatgctcg gccggtacgt cggtgtggtc ctcgcgcatc cagaactgga
     1981 ggagggcctg gaggccgtgt tcgaaacggg cctcggttgc gtcatggccg cccacgcctc
     2041 ccgtgaccct ccagaccttg ttgtcctcgt cggccccggc gatctcgaac tccaaaacat
     2101 tgggtgccgg gtaggtggcc gtggcctgcc atccggcttc cagggcggcg gccagggcga
     2161 caggcttcat cgatgagccg acctgtcggc cggagccgac ggccaggttg accttggcgt
     2221 cgctgtcggt ggcgaagaaa tcccggccac cgaccatggc cagcacctgg ccggttcccg
     2281 tctctagcac cacgaccgcc gcgtccgggt ggccctgatt ggcagggagg tgggcctcca
     2341 cggcagcttc ggcggagcgt tgcagatcga ggtcgaccgt ggtctcgatg cggaggccac
     2401 cttcgaacag caaccgttcc cggacaccgc ggctggctcc gaacgccgga ttgtccagga
     2461 accaccgacg gacctcctcg acgaagtgac cggcgggata gcgggtctcg aggcgggccg
     2521 agtactcctc gaggcgcggc gggttggcca tggcttccgt gtgctgttct tcggtgatga
     2581 actcgttggc cagcattcgg tcgagcacca ggtggctgcg tcgcaggctc ttggagtagt
     2641 tgaggtacgg gttgtagcgc ccggggagct ggatgattcc ggcgatcatg gccgcctcgg
     2701 ccaggttcac ctgggtgatg tccttgttga agtacgtctg ggccgctgcc ttaaccccgt
     2761 acgcgccgtg acccaggtac acggtgttga ggtactgcaa caggatgaag ttcttgctgt
     2821 actggtcctc gagacgggtg gcgtaccaga gttcctcgag ttttcggctg gctgtctgtt
     2881 cggcattacg gatgatggcc agcttcacgt actgctgggt gatggtcgag ccgccttggc
     2941 tgataccgcc agcttccagg tttgtccgtg cggcccggat gatggccttc aggtcgatgc
     3001 catcgtggac gtagaaccgt tcgtcttcga tggcgatgac ggcgtcacgg accatccggg
     3061 ggatttcgaa cagggtgcgg gcgctggtcc ggttctctgg ggctacgagg gtggtgatgg
     3121 ggcggccgtc gcgggcaacg accaccgacg attcggcctg ttcgggaatg gtgatctcaa
     3181 actcgcgtgt ctcgtacttg tagcacgaag tggaaaggat cgccgtggcg accaacgaac
     3241 agaccagttt gagtccgacg gagcgacggg cacgctcgct gcaggtcgga tgccttgaca
     3301 tcaggccagt ctggcccggc ggggcgaccg tggggcgtca ggacgacggt cgtctcgcct
     3361 tccggtcggg ttggagcgtc atcttcgaat ggacctccgg ccggtgggcc acaggcccca
     3421 tactgggggc atgagtacga cgatcctcga cgacctggct gcccgcggac tgatccggga
     3481 cagtaccgac atcgacgacc tgcgtcgccg gctgggcgag ggtccggtca ccctctactg
     3541 cggattcgat ccgacggctg acagcctcca catcggacac ctggtgcccc tactcctgtt
     3601 gcgccggttc caggatgcgg gccatcgccc gatcgctctg gccggcgggg ccaccggcat
     3661 ggtgggtgat cccagcggtc ggtctgctga gcgcaacctc ctggacggcc cgaccctcaa
     3721 ccacaacgtc gatgcggtgg cagtccagct ccgctcgttc ctccggttcg agggtgacct
     3781 gctgcccggc gatgcgtctg ccttgctggt cgacaaccgc gactggaccg agggcgtcgg
     3841 cgtactggag ttcctccgag acgtcggtaa gcacgtcacc gtcgggacaa tgctgggaaa
     3901 ggagtcggta cgagcccgtc tggctggcga tcaggggatc tccttcaccg agttcagcta
     3961 catgttgttg caggccaacg acttctacga actccacgct cgccacggat gcgagttgca
     4021 ggtcggtggc tcggaccagt ggggcaacat caccgccggg atcgacctca ttcgccgacg
     4081 cgtcggagcg ccggctcacg ggttgaccgt tcccctggtg acgagggccg acggggcgaa
     4141 gttcggcaag accgacgatg gtgcggtctg gttggacccc gctcggacgc tgccttacga
     4201 actgcaccag tacttcgtga atgttgacga ccaggacgtg gagcgtttcc tcctgcagtt
     4261 gacccttgtg gcggttgacg atgtggctgc ggtgatggct gagcacgcgt cggctccaga
     4321 gcaacgactg gcccagaacc gcctggccga cgaggtgtgc aatctggtcc acgggtccga
     4381 cgccacggaa cgggctcgtc tggcggccac gggcctgttc ggctcggagg cgcccaccgc
     4441 agcggtcctt gatgcgcttc gggggatcgt ccccgagacc tctgtgggag ctggcacgtt
     4501 ggttggcgga gagtccctgg tcgatgcact cgaggcaact ggcctctgtt cgtcacgcgg
     4561 cgatgctcgg cgaaccattg ccgggggcgg tgttcgtgtg aacggtcagc gagtgggcac
     4621 cgaggtaacg gcgttgcctg acgaggcggt agtcggcggg cggttcgtcc tgctgcagaa
     4681 gggcaagcgt caacgacacc tcctccttat cgaaggcccc ggtgacggac cggcagacgg
     4741 gcccactgtc tgaggtccgg ggtacgcgat cgtccggctc gggcggggtg ccgctcgtca
     4801 ttgcctgacc gcggaaaagg gtagaaaggt agggcggcgg gttggggcgc ctctgccaga
     4861 tggatagtgt ttctctgctc acgggtaacg gagtcgctct tgatggagc
//
LOCUS       DASCMR010000291         5219 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001394749, whole genome shotgun sequence.
ACCESSION   DASCMR010000291 DASCMR010000000
VERSION     DASCMR010000291.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5219)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5219)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5219
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001394749"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(114..2048)
                     /locus_tag="QGG16_06870"
     CDS             complement(114..2048)
                     /locus_tag="QGG16_06870"
                     /inference="COORDINATES: protein motif:HMM:NF036997.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25030.1"
                     /translation="MSVGSIGEAGPEQGRLAFDEVEPASGEPEVDVAPYETAGPDEGP
                     KRVVRVLPDVAAVSKAFDYLVPEAWSRDGRGERLGIGSRVRIILHGRRVAGWVVDDQV
                     EPPPGVALRPLSRLSGLGPSVELIELARWAAHRWVGPVAGLLSTASPPTMVEALGSPP
                     HPWTVPTTGDRWYDEAWRVDPDGRPSVVRLPPGDDVLPLVFEAARLGDALILAPTAEA
                     VRRLAGQLRRAGVPVSVAPRDWARAAAGGVVVGARAGAWAPVRDLRAVLVLDEHDDAY
                     REERSPTWNARDVAVERARRTGVPCVLVSANPSVESLEVASPARVSVPSRSAERIGWP
                     VVDLIDRRTDDAARSGLFSPLLVPVLRGDGGDPVVCVLNRKGRSRLLACNACGVLARC
                     EVHDAALIEDRPAGVDEMPGLRCPVDGAVRPVVCDSCGGTRMRNLRAGVNRVREELEA
                     LAGRPVVEVTAETDPSALDGVHAGLFVGTEAVLHRIGRRVARVVFLDFDQELLAPRMR
                     AADQAMALLARAAQLLGPRSAGGRLIVQTRQPDHEVLQAVLHADPGRLAVAERERREI
                     LGLAPFGALARISGAVAPAFMERLAAAEGRTGPGIEVMGPRDDAWLVRAPDPGALSDL
                     LRSVERPSGRLRIEVDPARA"
     gene            complement(2068..3264)
                     /gene="metK"
                     /locus_tag="QGG16_06875"
     CDS             complement(2068..3264)
                     /gene="metK"
                     /locus_tag="QGG16_06875"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017370549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HJP25031.1"
                     /translation="MSDNWTFTSESVSEGHPDKMADQISDAVLDAMLTVDPESRVACE
                     TLITTGLVVVAGEVTCRGYVDIPRTVRNTICEIGYDREDFGFDGHTCGVMVTLDAQSV
                     DIAQGVDAAEEVRSGTAGEDDDLDRQGAGDQGMMFGFACDETDVLMPLPIHLAHRMAE
                     RHAEVRKAGTVPYLRPDAKTQVTFEYEGNTPVRLRTVLVSTQHNDGIDRDSMIRPDLI
                     EQVIRPVIPEQFADDDYEVHVNPTGRFVIGGPVGDAGLTGRKIIVDTYGGMARHGGGA
                     FSGKDPSKVDRSAAYATRWVAKNLVAAGVATRCEVQVAYAIGMARPISVLVDTFGTAN
                     VDPERISACVQEVFDLRPAAIIRDLDLKRPIYGETAAYGHFGRPGLPWEATDRVDDVR
                     SFLGLG"
     gene            complement(3261..4538)
                     /gene="coaBC"
                     /locus_tag="QGG16_06880"
     CDS             complement(3261..4538)
                     /gene="coaBC"
                     /locus_tag="QGG16_06880"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HJP25032.1"
                     /translation="MGPLAGRRIVLGVTGGIAAYKAVEVCRRLVDAGAHVAPVMTEGA
                     LHFVGRATFDALGSEPVQTSLWDERHPIPHTRLGQGADLVLVCPATARLLSDYRTGRS
                     DDLLTATLLATRAPVVVAPAMHTEMWEQPSVAENVAVLADRGVTMVGPVDGLLAGGDV
                     GAGRMAEPADIVAAAFEVLGATDGSEPAGDLAGLTVLVTAGGTREPICPVRFIGNRSS
                     GKQGHALAAEAAVRGAKVQCITTQSASAPDCPGTEVVAVETAAEMASAVLERFPLVDV
                     VLMAAAVADFRPTEVADHKIKKGRNVPEIRLEPTVDILAQLGRTRASSQVLVGFAAET
                     DDLRQNAAQKLQAKGVDLIVANDVSAPQVGFEHETNAVVLLGIDGGITEVPLCDKREV
                     ARVVLDAARDIHQANCEQMNDDGADRASNGGDT"
     gene            complement(4576..4938)
                     /gene="rpoZ"
                     /locus_tag="QGG16_06885"
     CDS             complement(4576..4938)
                     /gene="rpoZ"
                     /locus_tag="QGG16_06885"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: protein motif:HMM:TIGR00690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HJP25033.1"
                     /translation="MQRHDSMVNPPIEGLLEAADSKFRLVTVSAKRARQINAYFGQLG
                     EGLGAAIPPQITSTSRKPLSISFEELSVGKIEAIEPPDEPEDVDALLDAIDAEMAEHQ
                     GDELPEGDVTVTDGAEGA"
BASE COUNT          861 a         1862 c         1680 g          816 t
ORIGIN      
        1 gttcatcccc cagctcggca aggtcgggat cctcaacgtc tccaccgccg ccggcatcgc
       61 cctctacgag ctgaaccgtc gacgctggta gaacggttgc cggttgttcc cattcaggcc
      121 cgggccggat cgacctcgat tctgagtcgt ccggaagggc gttcaaccga ccggaggagg
      181 tccgaaaggg cgccgggatc gggtgcccgg accaaccagg cgtcgtccct ggggcccatc
      241 acctcgatgc cgggtcccgt ccgaccctcg gctgcagcca gtcgctccat gaatgctggc
      301 gccacggcac ccgagatacg agccaacgcc ccgaacggcg ccaggccgag aatctcccga
      361 cgctcgcgct ccgcaacggc cagccgaccc gggtcggcgt ggagcacggc ctggaggact
      421 tcatggtcgg gttggcgcgt ctggacaatg aggcgtccgc cagccgaccg aggccccagc
      481 agttgggcgg ccctggccaa cagggccatg gcctgatcgg cggcccgcat ccgtggcgcc
      541 agcaactcct gatcgaaatc caaaaagacc acgcgggcca ctcgacggcc aatccgatgg
      601 agtaccgcct cggttcccac gaagagcccg gcatggacgc cgtccaacgc cgacggatcg
      661 gtttccgcgg tcacctccac gacgggtcga ccggccagcg cctcgagttc ctcgcgtacc
      721 cggttcaccc cggcccggag gtttcgcatt cgtgtgccgc cgcagctgtc gcacaccacc
      781 ggccgtacgg caccatccac tgggcaacgc aacccgggca tctcatcgac tccggccggc
      841 cggtcctcga tgagcgccgc gtcgtggacc tcgcagcggg ccagcacacc acaggcatta
      901 caggccagca gccgtgaccg acccttccgg ttgaggacgc acacgacagg gtcgccaccg
      961 tcaccgcgca ggaccggcac cagtaggggg ctgaacagcc cgcttcgcgc cgcgtcgtct
     1021 gtccgacgat cgatcaggtc gactaccggc cagccgatcc gctcagccga ccgggacggg
     1081 accgacaccc gcgccggact ggccacctcg agggattcga cactcgggtt ggccgagacc
     1141 agcacacagg gcacccctgt ccgtcgagcc cgctcgacag ccacgtcgcg ggcgttccag
     1201 gtcggtgacc gctcctcccg gtaggcatca tcgtgctcgt cgagcaccag aaccgcccga
     1261 agatcccgga ctggtgccca tgcccccgct cgggctccca ccaccacgcc cccggccgct
     1321 gcccgggccc agtcccgagg ggccacggac accgggacgc ccgctcgccg cagctgaccg
     1381 gccagccgtc gaacggcctc ggctgtggga gccaggatca gcgcgtcacc gaggcgggcc
     1441 gcctcgaaca ccagcggcag cacatcgtca cccggcggga gtcgcaccac cgacggccga
     1501 ccatcgggat ccacccgcca tgcctcgtcg taccaccgat cgccggtggt cggcacggtc
     1561 cacgggtggg gtggcgatcc gagcgcctcg accatcgtgg gcggcgacgc cgtggacaac
     1621 agaccggcca ctgggccgac ccagcggtgg gccgcccaac gggcgagctc gatcagttcg
     1681 acgctggggc cgagaccact cagacgtgag agcggccgca gggcaacccc cggtggtggc
     1741 tcgacctgat cgtccaccac ccatccggcc acccgccggc cgtgcaggat gatccggaca
     1801 cggcttccga tgccgaggcg ctcaccccga ccgtcccttg accatgcctc gggaaccagg
     1861 tagtcgaagg ccttcgagac cgcagcgacg tccggtagga cccggaccac acgtttcggc
     1921 ccctcgtcgg gtcccgcggt ctcgtaggga gcgacatcca cttctggttc ccccgaagcc
     1981 ggctcaacct cgtcgaacgc cagtcggccc tgctccggcc cggcctctcc gatcgacccg
     2041 acactcaccg ggtcaacgac ttccggttca gcccaggccc aggaaggaac ggacgtcgtc
     2101 cacccggtcg gtggcctccc aggggagtcc gggccggccg aagtgcccgt aggccgcggt
     2161 ctcaccgtag atcgggcgct tcaggtctag gtcgcggata atggccgccg gacggaggtc
     2221 gaagacctcc tgcacgcagg ccgaaatccg ctccgggtct acgttggccg taccgaaggt
     2281 gtcgaccagt accgagatcg ggcgggccat accgatggcg taggccacct ggacctcgca
     2341 acgggttgcc actcccgccg ccaccaagtt cttggccacc catcgggtgg cgtaggccgc
     2401 tgagcggtcg accttggacg gatccttgcc tgagaaggcg ccaccaccgt ggcgggccat
     2461 gccgccgtag gtgtccacga tgatctttcg accggttagg ccggcgtctc ccactggacc
     2521 accgatcacg aaccggcccg tcgggttgac gtgcacctcg tagtcgtcgt cggcgaactg
     2581 ctcggggatc accggtcgga tgacctgctc gatcaggtcc gggcgaatca tcgaatcccg
     2641 gtcgatcccg tcgttgtgct gggtcgacac caggaccgtc cggagccgta ccggggtgtt
     2701 tccctcgtat tcgaaggtga cctgggtctt ggcgtcaggt cggaggtacg gcaccgttcc
     2761 cgccttgcgg acctctgcgt ggcgttcagc catccgatgg gccaggtgga tgggcaacgg
     2821 catgagcacg tcggtctcgt cgcaggcaaa gccgaacatc atcccctgat cgccggcccc
     2881 ctggcggtcc aggtcatcgt cctcgcctgc cgtgccggag cggacctcct cggcggcgtc
     2941 cacgccctgg gcaatgtcga cggactgggc gtcgagggtg accatcacac cgcaggtgtg
     3001 accatcgaaa ccaaagtcct cacggtcgta gccgatctcg cagatcgtgt tccggacggt
     3061 ccgtgggatg tcgacatagc cgcggcaggt gacctcgccg gccaccacga ccaggccggt
     3121 ggtgatcagc gtttcgcacg ccacacggct ctcagggtcc acggtcagca tcgcgtcgag
     3181 cacggcatcg gagatctgat cggccatctt gtccggatgg ccctcgctca ccgattcgga
     3241 ggtgaaggtc cagttgtcac tcatgtgtcg cctccgttcg atgcccggtc ggccccgtca
     3301 tcgttcatct gttcacagtt cgcctggtgg atgtcgcggg cggcatcgag gaccaccctc
     3361 gccacctccc gcttgtcgca caggggcacc tcggtgatcc cgccatcgat tccgagcagg
     3421 actacggcgt tggtctcgtg ttcgaacccc acctgaggag ccgacacgtc gttcgccacg
     3481 atgagatcga cgcccttggc ctgcagtttc tgcgcggcat tctgtcgcag atcgtcggtt
     3541 tccgcggcga accccaccag gacctgcgaa ctggcccggg tccgacccag ttgggcgagg
     3601 atgtcaacgg tgggctcgag acggatctcg ggcacgtttc ggcccttctt gatcttgtgg
     3661 tcggccacct cggtagggcg aaagtcggcc accgctgcgg ccatgagcac cacatcgacg
     3721 agcggaaagc gttccaggac ggcggaagcc atctcggcgg ccgtctccac ggcgacaacc
     3781 tcggtacccg ggcaatcggg tgccgacgcc gactgggtgg tgatgcactg gaccttcgcc
     3841 ccgcggactg ccgcctcggc agccagagcg tggccctgtt tgcccgacga ccggtttccg
     3901 atgaagcgga ccggacagat gggctcccga gtaccgccgg cggtcaccag gacggtcagg
     3961 ccggcgaggt cccctgccgg ttcgcttcca tccgtcgccc ccagcacctc gaaggcggcg
     4021 gccacgatgt cagccggttc agccatacgg ccggcaccta cgtccccgcc ggccagaagg
     4081 ccgtccaccg gaccaaccat ggtcacccca cggtcggcca gcacggccac gttctcggcc
     4141 accgagggct gctcccacat ctccgtatgc atggccggcg ccacgacaac cggcgccctg
     4201 gtggccaaca gggtggcggt gagtagatca tcggaccggc cggttcggta gtccgacaac
     4261 agccgggccg tggccgggca gaccagcacc aggtcggcgc cctgccctag acgggtgtgt
     4321 gggatgggat ggcgttcatc ccagaggctg gtttgtacgg gttcggagcc cagggcatcg
     4381 aaggtggccc gtcctacgaa gtggagtgca ccctcggtca tgacgggcgc cacgtgtgcg
     4441 ccggcgtcga ccaatcggcg acaaacctca acggccttgt aggcagctat cccaccggtg
     4501 acaccgagga cgatgcgacg gccggcgagg ggtcccatga gggtcatccg tccgcgagga
     4561 cgaccggagt tcggatcagg cgccctcggc gccatcggtg accgtgacgt caccctcggg
     4621 aagttcatcg ccctgatgct cggccatctc ggcgtcgatg gcatccagca gggcatcgac
     4681 atcctcaggc tcatcgggcg gctcgatggc ctcgatcttg cccaccgaaa gttcctcaaa
     4741 ggagatggag agcggcttgc gggacgtgga ggtgatctgc ggtgggatgg cggcgccaag
     4801 gccctcgccc aactggccga agtacgcgtt gatctgacgg gcgcgcttgg cgctcaccgt
     4861 taccagacgg aacttggagt cggcggcctc taggagacct tcgatcggcg ggttgaccat
     4921 gctgtcgtga cgctgcaccg gggaatcctc tatccgttgt tcgtctaagt cgatgcccgg
     4981 ttccaagaat gaaacgggcg gtaaatcggt ccctctacac gggccgatcg gccctccacg
     5041 gtaccaccga gcctgcatga accctcgagc gggcccgcca acggaaacgg tccgggatcc
     5101 gttcccgagc ccgaccaggc cgttccggag ttccggtcag gaactggacc gggcagcgtc
     5161 gatcagatca cggatctcga cgatcgcttc ctccagcacg tcgttcacca cccgtcggt
//
LOCUS       DASCMR010000292        14871 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001406641, whole genome shotgun sequence.
ACCESSION   DASCMR010000292 DASCMR010000000
VERSION     DASCMR010000292.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 14871)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14871)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14871
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001406641"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1305
                     /locus_tag="QGG16_06890"
     CDS             <1..1305
                     /locus_tag="QGG16_06890"
                     /inference="COORDINATES: protein motif:HMM:NF013720.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage T C-terminal barrel
                     domain-containing protein"
                     /protein_id="HJP25034.1"
                     /translation="MDPRRFGPWSDQQYTIDKSVDEYHEMYQVRMPGEYRSAGRPMKR
                     TPIADRLDALGAQWQDVWGWERPRYYGEPEDYSWRRSNAQDIVGAECHGVRNRVGIAD
                     LTAFAKFGVFGPDAAALLGRLSANRLPTRHSGIRLIHMLTEHGGIECEMTVTRMSDDR
                     FYLNSAIAGSTHDLDWLQQHVLPDEDVTIEDWTDQMGILAVTGPLARDVLAACTDADL
                     SSDAWPWLTCQQVEIGGVDCIALRVSYVGELGWEIHHPIDQMPQLYDTLVAAGQPHGM
                     VHFGSSAMNVMRMEKAYKAWGGELTTEITPIEARLERFVDLDSGRNFLGRDATLARRQ
                     QEGDAGLDMVLVYCEVDTTDSDCRGNEPCYDPVGDGSRCMGITTGGAWGHTVDRSLAF
                     AYVEPAFESPGSTFEITLFGQRHTATVLDRPAHDPTNARLRA"
     gene            1302..2888
                     /locus_tag="QGG16_06895"
     CDS             1302..2888
                     /locus_tag="QGG16_06895"
                     /inference="COORDINATES: protein motif:HMM:NF018012.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0015948 - methanogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine methyltransferase family protein"
                     /protein_id="HJP25035.1"
                     /translation="MSATTPTPGKRAGRTGGRAARVAARTAGLSDDEKAGHPGQSGGA
                     FKPLTDSECRTVYETALTMLEEFGMGTPIPEFIEVVVPAGGWLDDDERLHFPRSLVED
                     AVDMAAKEFTWHGYDDDRSIVVGGDRVHFGTAGAAVSVWDHETRKHRPSDLQDVFDVA
                     RLVDTLEHVHFHVRTLVARDMIESRDLDVNTAYAVAMGTTKPVGTSFFQPEHVVEVVD
                     MFDEMLGGRPGSFAERPFCVANNTFVVPPLRYAEDAVRSMVAQVQTGMPINLLSAGQA
                     GATSPAALAGSLAQALAECLSALTCVNLLNPGHPCVMGLWPFVSDLRTGAMTGGSGEE
                     AVLNAAAAQMANWLGLPSGVAAGMADSKVPDNQAGHEKGLTVALAGHAGANLVYESAG
                     MLASLLACSYEALVIDNDMLGAVNRTVRGIEVTPDTLSIETIKSVIFGAGHFLGQDQT
                     LSLMQSEYIYPEVGDRLSPADWFDAGATSVDERARLRVHEILGSHFPSHVSPDLDARV
                     RDRFDIRLPVGALTTSTRWG"
     gene            complement(2926..3858)
                     /locus_tag="QGG16_06900"
     CDS             complement(2926..3858)
                     /locus_tag="QGG16_06900"
                     /inference="COORDINATES: protein motif:HMM:NF023166.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RsiV family protein"
                     /protein_id="HJP25036.1"
                     /translation="MVDAMTCGRVRMWTGVLAVLMGTLLLVGCAAADGREMVANGIGH
                     TPEPTEAPVVEEPEPEPTSSLPEGTILESGGSANDGGFASGAAHGSVYVDSMAGTVGG
                     AGSYNLSYPQLDGLELDHPVNVALRRPTEAMRAEFVAAMSERSGEGSGEDSGEVIGGD
                     SLRGSGKVYLLDDRLVSVVYEFRIEWSGAAGVDDRVDSVLVDLQMGDELGLEDLFVPG
                     SPWLETVGFFARQDLVDGLGDMGLWPDGRGLESEASNYSVFGLTVAELVVRFGRYQVA
                     PGAAGMPDATVRWASLAGLVDPDGPAGHLAASAG"
     gene            4028..4528
                     /locus_tag="QGG16_06905"
     CDS             4028..4528
                     /locus_tag="QGG16_06905"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25037.1"
                     /translation="MVIRRNSKRVKSHRGRRPVAQTVANGPGADQTLLDLVNGLREIA
                     ERVDVLEHRFDALGTSAAIDPDGEDVMDLRLHVARLFAEVSRVTVGLEARIAEVAGHA
                     GVAMAGDPVSATLSTVGLPITTPALAGDETFEDLTADSPARARGANSPSGTSTARRTS
                     GWQPAD"
     gene            complement(4624..7581)
                     /locus_tag="QGG16_06910"
     CDS             complement(4624..7581)
                     /locus_tag="QGG16_06910"
                     /inference="COORDINATES: protein motif:HMM:NF015644.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0182 family protein"
                     /protein_id="HJP25038.1"
                     /translation="MKIRVIAGVVVSTFFILMLSLRGIAGFWTDYLWFDALGHEGVFV
                     SVFGAQVVLVALFTALFFGILFTNLTVADRLAPPIRPPGPEEDLLRNYHLIVGRRRWL
                     VRFVLSGLFALIAGFGVSGRWEEWLLFTNGVDFGVVDAQFGRDIGFYVFRLPFLSFVV
                     GWVFATLIVTLVVTTLFHYINGGIRLQTTGERVQPAVKAHLSVLLGLVALVRAADYWL
                     ARFELTTSDRGAVTGATYTDVKAQLPAINLLILISLFAVALLIVNIRRRGWVLPTLAV
                     GLWAFVALIMGNIYPAVIQNLRVEPAESEKEAPYIERNITATRAAYGLDAMIEVQLTD
                     FDNRVTAADLRANPGTVRNIRTLDPLVVQGTFDRLQGEREFYTFADEMDTDRYTIDGE
                     TTQVLLGTRELELNETRSWENQHVAFTHGYGVAMAPVSRVKGSGDPDFLVGDLPVSID
                     PTVDVVLDRPQLYMGEGLGGYAVVGATRDEVDFTDENQETQAVRYADIGGDGGVGMGS
                     IVRRVAFALRFGQLEPLISNFITDESRVFYVRDIRSRVEKLAPFLHFDADPYPVLADG
                     RIYYVVDGYTTTDRYPYSQPASVGELPKSSGLRHGLNYVRNSVKATVDAFTGEVVLYV
                     VDETDPLVAAFSSAFDGLFTPLSEMPASLVAHLRYAEDLFRLQSEIWGAYHVDDTENF
                     YQRASEWAVSQDPGRTGEGAANVMLVDEQGFQVGTRHRRMAPYRTMVSLPEGDDASGD
                     GVYDAGSSEDAEFVIMRAYVPLDEDDARKELAAYLVGRSDGDRLGELVVYRPPSSNFD
                     GPALAEERIRNDEAVASLQTLLSQRGSSVLFGELLLVPIEDSILYVRPLYVQAEGDST
                     VPELERVIVAVGEQVVMADSLQEALEELTGASLGDLFRGISTGVSADTATDATGTGSG
                     SSGDAASGSGSSSDSSIGTGSSVPDNLADLVAELARLQAASAAALSEDPADWAEFGRI
                     QARMQDLVEDLAG"
     gene            complement(7680..8783)
                     /locus_tag="QGG16_06915"
     CDS             complement(7680..8783)
                     /locus_tag="QGG16_06915"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF017200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004176 - ATP-dependent peptidase activity
                     [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S16 family serine protease"
                     /protein_id="HJP25039.1"
                     /translation="MRLLVGTMAGWASMEENLLADDPPSPPSHPLRGAIVLLLVAAAL
                     LATFVRVPYFVFRPGSVQPLSTKVMITTGQRFNATGEIHFTTVRQDATVNGWEWLEAR
                     MKPSLTLIEEDRVLGGRSRDENRTFNMQLMRVSKSTAVAVALRYLGVDPFRATGVGLA
                     EVGGPSTGLLTIDDVILTVDGAPVLRAMDLVEAIRDRGPGDVVDLEVEPVRGGASRTV
                     SVVLGARDDDQTVGFMGVAPQTRWEDVEDLPIDVLVNTGSVGGNSAGLALTLSILDLI
                     TPGELTGGLQVATTGTIDPTGVVGSIGGIVQKVVAARDGGMDLFLVPTSEADQARQHA
                     GDMPVEGVATLDDALAALARHGGQTQNLRLPTG"
     gene            8817..9095
                     /locus_tag="QGG16_06920"
     CDS             8817..9095
                     /locus_tag="QGG16_06920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25040.1"
                     /translation="MSRRSFLNRSLPPTGDLEYAVDRPWSPGARLGIWFHPPHRVATG
                     RRARIRWWHRVRSVVLLAFFVVFGGIALATVVGVGIFLSGFLIERAIG"
     gene            9108..9899
                     /locus_tag="QGG16_06925"
     CDS             9108..9899
                     /locus_tag="QGG16_06925"
                     /inference="COORDINATES: protein motif:HMM:NF025030.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HJP25041.1"
                     /translation="MTNPNANNESDPDGHPGENPAPPINRHVHPDPPPTPEVAERRRH
                     AVLAGHTGDVETARSLRLDPEPVVRAAALGALARAGGLTDDELAGGLTDTNAAVRRRA
                     LEILGAPEEPVSKSAGAPSGSLADLLARLLADLLSDHDPTVVEVACWAAGEHPGSANV
                     LVRPLVAVAGTGSGPEAERPGHPDHLCREAAVAALGALGHEAGRESVLAGLTQKATIR
                     RRAVLALAAFEGDDIEAALAEALDDRDWQVRQAAEDLLGVDPGPG"
     gene            complement(9896..10900)
                     /locus_tag="QGG16_06930"
     CDS             complement(9896..10900)
                     /locus_tag="QGG16_06930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HJP25042.1"
                     /translation="MARDLAIDLGTANTLVYARGEGVVLAEPSVIAINERTSEVLAMG
                     DEAWHMIGRTPEHVVAQRPLRKGAITDFEVTQRMVRLLLERVGVSRFNRPKVLICVPS
                     AITAVERRAVTDAARRAGATDAQLIEQPLAAAIGANLPISEPVGNMVVDIGGGTSESA
                     LLSLGGVVALEAVRVGSFDIDAAIQAYVRREYGLAIGERTAEEIKWTIGSAAPTPEEG
                     RAEVKGRELMSGLPKTVVLTPLEIRRAIEEPVAAMVESVVQCLAQAPPELAQDLLAHG
                     ICLVGGGSLLRGLDVRIAEDAGVPVVKVETPMECVVLGAGHCIESFEAMRVMFMEGRR
                     "
     gene            complement(11168..11728)
                     /locus_tag="QGG16_06935"
     CDS             complement(11168..11728)
                     /locus_tag="QGG16_06935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HJP25043.1"
                     /translation="MAGETPSDGRPSGAGPGVVPDLVDGPDDETWVALTDGPLPVDEV
                     TGWIGRHDCGAVVVFRGDARDHAEGRPEVTALEYEAYESQVVPRLGRLAGEARNRWPD
                     LGRIALIHRTGPLAIGETAVVVAVSSPHRDTAFDAGRWCIDTLKETVPIWKSEAWAGG
                     EHWGVDAQHVIEVPGSAPQDSPQEAV"
     gene            complement(11718..12788)
                     /locus_tag="QGG16_06940"
     CDS             complement(11718..12788)
                     /locus_tag="QGG16_06940"
                     /inference="COORDINATES: protein motif:HMM:NF013530.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HJP25044.1"
                     /translation="MSRVVVTGSTGAVGRQLCVGLAAAGHEVIGLDRRSSTAPAPEIE
                     LRTVDLAVTDLRSQLADVEVVVHLAAGVTAGDQDTDEGRDRLAVVERLLAAASDAGVT
                     HLVVRSSAMVYGAWPDNPVPLTEDAPVRPCPDFAFAVHRARMEELAGAWAAESDDRAL
                     TVLRAAVTVAEERPGGLATVVGAAASIRSDEGEPLGQFLHSDDLASAAVCAVQARYNG
                     PLNVAPDGWIGVEVMAELGGPGPRLRLPGPVAALVTRALWKAGLSPAPPGVFPYSVHP
                     WVVANDRLRNLGWVPTHSNEEAYVAGHEPGLLDRMDAQARQQVSLAVAGVLVLILGRL
                     IVRLIRRPRGSGRAPYDATDGR"
     gene            12879..14198
                     /locus_tag="QGG16_06945"
     CDS             12879..14198
                     /locus_tag="QGG16_06945"
                     /inference="COORDINATES: protein motif:HMM:TIGR03624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent metalloprotease"
                     /protein_id="HJP25045.1"
                     /translation="MSPEDPPEDPFAAFTQAFGSMFPGMDAGMPSGTGLPGMGQAGAD
                     PARQIAMAIASEGASEPNVDPMVRMEYESLLRVAELQVASCTGLTVARSGALSIRPVT
                     RTVWASSSVDAYRPYLSKMAQLPTDLAGDLGVGSGLEIDGEPIDPDDPRGEQTLQWLS
                     GLMAAMAPMMAGMTTGTMVGRLALRSLGTYDLPIPRPTGGSDADTLLIVSPNVEAFSA
                     DWSLPADDLRLWICLHEVAHHAVLGVPHVRHAIGDLLARHAGAFRTDPAELSDRLELG
                     LEDLPGLNPTNPDPAAGADALARLQDALDPEAVLGAVRSPEQEVLLPHLEALVAVTVG
                     VVDHVMDTVGTGLIGSYGQVTEALRRRRVTTSDADRFVERILGLNLTQEQVDRGSAFV
                     TGVVERAGEDGLALLWTEARNLPTPSEVDAPGLWLARLELPDPPSDD"
     gene            complement(14217..>14871)
                     /locus_tag="QGG16_06950"
     CDS             complement(14217..>14871)
                     /locus_tag="QGG16_06950"
                     /inference="COORDINATES: protein motif:HMM:NF017760.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJP25046.1"
                     /translation="VGFTSFLLAFEFRGGGGGVSIESVGRPAGAGSGLVRGESVLAAA
                     PAPAWHFGLVLASVGLGAFAAAQFSPVLRTRLLEERIIRGVLFVGVTLSGLAVWLGGL
                     WGAVLVGGTVAMCSGTAKLAFDSLVQRDAPGTNHGRSFAKFEGRFQLAWAVGAFLAVF
                     LPLSIEVGYLFIAALFAAALTWFGLATPPIPRIETPDEPDRPDGQFGFWRRGDPGGG"
BASE COUNT         2650 a         5497 c         4503 g         2221 t
ORIGIN      
        1 atggaccccc gccgcttcgg cccgtggtcc gaccagcagt acacgatcga caagtccgtg
       61 gacgaatacc acgagatgta ccaggtgcgg atgcccggcg agtaccgctc ggcgggccgc
      121 cccatgaaac gcacgcccat cgccgatcga ctcgatgccc taggtgccca gtggcaggac
      181 gtctggggtt gggaacgtcc ccgctactac ggcgaacccg aggactactc gtggcggcgc
      241 tccaacgccc aggacatcgt cggcgctgaa tgccatggcg tgcgcaaccg ggtgggcatc
      301 gccgacctaa ccgccttcgc caagttcggc gtgttcggcc ctgacgccgc agccctcctt
      361 ggccgcctct cggccaaccg gctcccaacc cgccatagcg gcatccgcct catccacatg
      421 cttaccgagc acggcggcat cgagtgcgag atgaccgtca cccgcatgtc cgacgatcgc
      481 ttctacctca actcggccat cgccggctcc acccacgacc tcgactggct gcagcagcac
      541 gtgctccccg acgaggacgt aaccatcgag gactggaccg accagatggg gatcctcgcc
      601 gtgaccggcc ccctggcccg cgacgtgctg gccgcctgca ccgacgccga cctgtcatcg
      661 gatgcctggc cgtggctgac ctgccagcag gtcgagattg gtggggtgga ctgcatcgcc
      721 ctgcgggtca gctatgtcgg cgagctcggc tgggagatcc accaccccat cgaccaaatg
      781 ccccagttgt acgacaccct ggtggccgcc ggccagcccc acggcatggt ccacttcggc
      841 tcgtcggcca tgaacgtcat gcgaatggag aaggcctaca aggcgtgggg cggcgaactc
      901 accaccgaga tcacccctat cgaggctcgc ctcgagcgct tcgtcgacct cgactcgggc
      961 cgcaacttcc tcggccgtga tgccaccctg gcccggcgcc aacaggaggg cgacgccggc
     1021 ctcgacatgg tcctcgtgta ctgcgaggtc gacaccaccg actcggactg ccggggcaac
     1081 gaaccctgct acgacccggt cggcgacggc tcgcgctgta tgggcatcac caccggcggc
     1141 gcttggggcc acaccgtcga ccgatcactg gccttcgcct acgtcgaacc ggccttcgaa
     1201 tcacccggct ctacattcga gatcaccctg ttcggacaac gccacaccgc caccgtgctg
     1261 gaccgtccgg cccacgatcc gaccaacgcg aggctgcgag catgagcgcc accaccccta
     1321 ctcccgggaa gcgtgccggc cggacagggg gccgggccgc acgtgtcgcc gcacggaccg
     1381 ccggactgtc cgacgacgag aaggccggcc accccggtca gtccggtggc gccttcaagc
     1441 cgctgaccga ttcggagtgc cgcaccgtct acgaaacggc gctgaccatg ctcgaggagt
     1501 tcggcatggg cacccccatc cccgagttca tcgaggtcgt ggtcccagcc ggcggctggc
     1561 tggacgatga cgagcgcctc cacttccccc gatccctcgt cgaggacgcc gtcgacatgg
     1621 ccgccaagga gttcacctgg cacggttatg acgacgaccg ctccatcgtg gtcggcggcg
     1681 accgcgtcca cttcggcacc gctggcgccg ccgtctcggt atgggaccac gagacccgca
     1741 agcaccgtcc atccgacctc caagacgtgt ttgacgtggc ccgcctcgtc gacaccctcg
     1801 agcacgtcca cttccacgtc cgcaccctgg tagcccgaga catgatcgag tcacgtgatc
     1861 tcgacgtgaa caccgcctac gcggtggcca tgggcaccac caagccagtg ggcacgtcgt
     1921 ttttccagcc cgaacacgta gtcgaggtgg tcgacatgtt cgatgaaatg ctgggcgggc
     1981 gacccggatc cttcgccgaa cggccgttct gcgtggccaa caacacattc gtcgtgccgc
     2041 cgcttcgcta tgccgaggac gccgtgcgtt ccatggtcgc ccaggtccaa accggcatgc
     2101 ccatcaacct tctgtcggcc gggcaggccg gcgctacgtc gcccgccgcg ctagccgggt
     2161 cgctcgccca ggccctcgct gaatgcctgt cagcgcttac gtgcgtgaac ctgctcaacc
     2221 cgggccatcc atgcgtgatg ggcctgtggc cgttcgtgtc cgacctccgc accggtgcca
     2281 tgaccggtgg ctccggcgag gaggcagttc tcaacgcggc agcggcccag atggccaact
     2341 ggctgggcct tccctccggc gtggccgccg ggatggccga ctcaaaggtt cccgacaacc
     2401 aggccggcca cgagaagggt ctgaccgtgg ccctcgccgg gcacgcaggc gccaacctcg
     2461 tctacgaatc agcggggatg ctggccagcc ttctggcctg ctcgtacgag gccctggtca
     2521 tcgacaacga catgctgggc gccgtcaacc ggaccgtccg cggcattgag gtcacccccg
     2581 acaccctctc gatcgagacc atcaagtcag tcatattcgg cgccggccac ttcctcggcc
     2641 aggaccagac tctgtcgctg atgcaaagcg agtacatcta tccggaggtc ggcgaccggc
     2701 tgagcccagc cgactggttc gacgccggag ccacctcagt tgacgaacgg gctcggctcc
     2761 gggtgcacga gatactcggt tcacacttcc cgtcgcacgt gtcgcccgac ttggacgccc
     2821 gggtccgcga ccggttcgac atcaggctcc cggtcggagc gctcaccaca tcgacccgct
     2881 ggggctgagg cgatcggtgg cgactcgctc cggacctcgg tcaaatcagc ccgccgaagc
     2941 agcgaggtgc ccggctgggc catccggatc caccagccca gccaacgacg cccatcgcac
     3001 agtggcatcc ggcatgccgg cagcacccgg ggccacctgg taccgaccaa accggaccac
     3061 caactccgca accgtcagac cgaacaccga gtagttcgac gcctcggact ccaggccccg
     3121 accgtccggc cacaggccca tatcccctag accgtccacc aggtcctgac gggcgaagaa
     3181 tccgaccgtc tccagccatg ggctccccgg tacaaacaaa tcctcgaggc ccaactcgtc
     3241 acccatctgc aggtcaacca gcaccgaatc cacccgatcg tctacaccgg ccgcgcccga
     3301 ccactcgatc cggaactcgt acaccacgct gaccaaccgg tcgtccagga ggtagacctt
     3361 gcccgacccc cgaagcgagt cgccaccgat cacctcacct gaatcctcgc ctgacccctc
     3421 accagaccgt tcggacatgg ccgctacgaa ctcggcccgc atcgcctcgg tcggacgccg
     3481 gagcgccaca ttcaccgggt ggtccagttc cagcccatct agttgcgggt agctcaggtt
     3541 gtatgacccc gccccaccga ccgtcccggc catcgaatcc acgtacaccg aaccgtgcgc
     3601 cgctcccgaa gcaaacccgc cgtcattggc actaccaccg gattcaagga tcgttccctc
     3661 aggcagcgaa ctggtcggtt cgggctccgg ctcctcgaca accggcgcct cggtcggttc
     3721 cggcgtatgc ccgatgccgt tggccaccat ctcgcgacca tcagcagctg cacaaccgac
     3781 tagcaacagc gtccccatca atacggccaa cacgccggtc cacatgcgga ccctcccgca
     3841 ggtcatcgca tccaccatcg ccgcgccccg acggcagtcc ccggaccgac ccaatcggtt
     3901 ggctcagaca gcggcaggga gcaccggaag atcacgcacg ggagggtagt caggcggcgc
     3961 cggacaactt gaacaagcca ttccgtgggc gacctgtcgg aaacccgctc gtcgctaaca
     4021 tcgacctatg gtcatccgtc ggaactccaa gcgagtcaag tcccatcggg gtcggcgacc
     4081 cgtcgcccag accgtggcca acggacccgg cgccgaccag accctccttg atttagtcaa
     4141 cggtctccgc gagatcgccg aacgcgtcga cgtcctggag caccggttcg acgcccttgg
     4201 cacctcggcc gccatcgacc ccgacggcga ggacgtcatg gacctccgac tccacgtggc
     4261 ccggctgttc gccgaggtat cccgggtcac cgtcggtctc gaggcccgta tcgccgaggt
     4321 ggccggccat gccggcgtgg caatggccgg cgacccggtc agtgccaccc tgtctacggt
     4381 gggcctgccc atcaccactc cggcattggc cggcgacgag accttcgagg acctcaccgc
     4441 cgactccccg gctcgggccc ggggtgccaa ctccccctcg ggcacgtcca cagcccgccg
     4501 caccagcggc tggcaacccg ccgactgacc ccggcaggac tcggtcagat ctcaccggct
     4561 gacctactca cccagcgggg atgagccggc cgggatgaac tagcgagacg gacccaattc
     4621 gaactagccg gccaagtcct ccaccagatc ctgcatccgg gcctgaatgc gcccgaactc
     4681 ggcccagtcg gccggatcct ccgacaacgc agccgccgac gccgcctgca ggcgagccaa
     4741 ctcggccacc agatcagcca ggttgtcagg caccgatgat cccgtcccga tgctgctgtc
     4801 cgacgaggac ccgctccccg aagcagcatc gcccgacgag cccgatcccg ttcccgtggc
     4861 atcggtggcg gtgtcggcgc taaccccagt cgagatgccc cgaaacagat cgcctagcga
     4921 tgcgccggtc agctcctcga gagcctcctg caacgaatcg gccatcacaa cctgctcgcc
     4981 gacggccacg atgacccgtt ccagttccgg caccgtgcta tcgccctcgg cctgcacgta
     5041 cagcggccgg acgtagagaa tcgaatcctc gatgggtacc agcaacagct cgccgaacaa
     5101 caccgacgac ccacgctggc tcaagagggt ctggagactg gccaccgctt cgtcgttccg
     5161 tatccgttcc tcggccaacg ccgggccgtc gaaattcgac gacggcggcc ggtagacgac
     5221 cagctcgccc agtcgatccc cgtcgctgcg acccaccagg taagcagcca gctctttgcg
     5281 ggcgtcgtcc tcgtccaacg gcacgtacgc ccgcatgatg acgaactcgg cgtcttcaga
     5341 cgaccctgca tcgtaaaccc cgtcaccgct ggcgtcatcg ccctccggca gcgacaccat
     5401 ggtccggtac ggcgccatcc tccggtggcg ggtcccaacc tgaaatccct gttcatcgac
     5461 cagcatcacg ttggccgcac cctctccggt ccggccggga tcctgagaga ccgcccactc
     5521 ggaagcccgc tggtagaagt tctcggtgtc gtcaacgtgg taggcacccc agatctcgga
     5581 ctggagtcgg aacaagtcct cggcgtaccg caggtgggcc accaaactcg ccggcatctc
     5641 cgagagcggc gtgaagagtc cgtcgaaggc cgacgagaac gccgccacca gcgggtcggt
     5701 ctcatcgacc acgtacaaca cgacctcgcc ggtgaacgca tccaccgtgg ccttcaccga
     5761 gttccggacg tagttaaggc cgtgacgcag cccactcgac ttcggtagct cgcccaccga
     5821 cgccggctgc gaatacgggt agcggtcggt cgtcgtgtac ccgtcgacca cgtagtagat
     5881 ccgaccatcg gccagcaccg ggtacgggtc ggcatcgaag tgcaggaagg gcgccagctt
     5941 ctcgacccgg ctccggatgt cacgtacgta aaacacccgt gactcgtcgg tgatgaagtt
     6001 cgagatcagt ggctccagtt ggccgaaccg cagggcgaac gccacacgcc gcactatcga
     6061 acccatcccc acgccaccgt cgccgccaat gtcggcataa cggacagcct gcgtctcctg
     6121 attctcatcg gtgaagtcga cctcgtctcg ggtcgcaccg accaccgcgt agccacccag
     6181 accctcgccc atgtacaact gcggccggtc caggaccacg tccaccgtcg ggtcgatcga
     6241 caccggcaag tcgccgacca ggaagtccgg gtcgcccgag cccttgactc gactcaccgg
     6301 cgccatggcc acgccatagc cgtgcgtgaa cgccacgtgc tgattttccc acgatcgggt
     6361 ctcgttcaac tccagctcac gggtaccgag cagcacctgg gtggtctcgc cgtcgatcgt
     6421 gtaccgatca gtgtccatct cgtcggcgaa ggtgtagaac tcgcgctctc cctgaagccg
     6481 gtcgaaggtc ccctgcacca cgaggggatc cagcgtccgg atgtttcgca ccgtgcccgg
     6541 attggcccgc aggtcagccg ccgtaacccg gttatcgaag tcggtgagtt gcacctcgat
     6601 catggcgtct aggccgtagg ccgcacgggt cgccgtgatg ttgcgctcga tgtacggcgc
     6661 ttccttctcg gactccgcag gctccacccg gaggttctgg atgaccgccg gatagatgtt
     6721 ccccatgatc agggccacga aggcccacag gccgacggcc agcgtgggca gcacccaacc
     6781 gcgccgcctg atgttcacga tgagtaacgc cacggcgaac agcgagatga ggatcagcag
     6841 gttgatggcc ggcagttggg ccttcacgtc ggtataggtt gcgccggtca ccgcgccgcg
     6901 gtccgacgtg gtcaactcga accgggccaa ccagtagtcg gcggcccgca ccagggcgac
     6961 aagtcccagc aacaccgaga ggtgggcctt gaccgcaggc tgcacccgct caccggtcgt
     7021 ctggaggcgg atcccgccgt tgatgtagtg aaacagcgtg gtgacgacca gcgtcacgat
     7081 cagcgtggcg aacacccacc cgaccacgaa cgacaagaac ggcaaacgga acacgtagaa
     7141 gccgatgtcg cgcccgaact gggcgtcgac cacaccgaag tccaccccgt tggtgaacag
     7201 cagccactcc tcccaccggc cgctcacccc gaacccggcg atcaatgcga ataggcccga
     7261 cagcacgaaa cgcaccaacc aacgacgccg accgacgatc aggtggtagt tccgcagaag
     7321 gtcctcttcc ggacccggcg gacggatggg cggtgcgagg cggtcagcga ccgtgaggtt
     7381 ggtgaacagg atcccgaaga acaaggcggt gaacagggcc actagcacca cctgggcgcc
     7441 gaataccgat acgaacactc cctcgtgtcc aagggcgtcg aaccagaggt agtcggtcca
     7501 gaagccggcg attccccgca gcgacagcat gaggatgaag aacgtcgaca ccaccacgcc
     7561 agcgatcacc cggatcttca tggagcctcc agaccggcga cggacccggg ggaagggacg
     7621 tggacctggc ggcggggcgt cttctgggcg catggactca gcctacggcc gatgacccgt
     7681 cagccagtcg ggagtcggag gttctgggtc tgaccaccgt gtcgagccag cgcggccaac
     7741 gcgtcgtcga gtgtggccac cccttcgacc ggcatgtccc ctgcgtgctg tcgagcctgg
     7801 tcggcctcag acgtcggcac caggaacaga tccattcccc cgtcgcgggc cgccaccacc
     7861 ttctggacga ttccgcctat cgaaccgacc acgccagtcg ggtcgatggt gcccgtggta
     7921 gccacctgca gcccaccggt caactcaccg ggcgtaatca ggtccaagat cgacagtgtg
     7981 agggccagcc cagccgagtt tccgcccacg ctgccagtgt tgaccagcac atcgatcggc
     8041 agatcctcga cgtcctccca ccgagtttgg ggcgccacgc ccatgaaccc caccgtctgg
     8101 tcgtcatcac gggcccccaa cacgaccgac accgttcgtg acgccccacc ccggaccggc
     8161 tccacctcga gatcgacgac gtcgcccgga ccacggtccc ggatggcctc cacgaggtcc
     8221 atggccctca gcaccggtgc gccgtccacg gtcaaaatca cgtcgtcgat ggtcaacaga
     8281 ccggtcgacg gtccacctac ctcggccagc cccacgccgg tggcccgaaa tggatccacc
     8341 ccgaggtacc gcagcgccac ggcgaccgcc gtggactttg agacacgcat caactgcata
     8401 ttgaacgtcc ggttctcgtc ccgggaccga ccgccgagaa cacggtcctc ttcgatcagc
     8461 gtcaacgacg gcttcatccg ggcttcgagc cactcccaac cgttgaccgt ggcgtcttgg
     8521 cggaccgtcg tgaagtggat ctcgccggtg gcgttgaacc gctgacccgt ggtgatcatc
     8581 accttggtac tcagcggctg gaccgacccg ggccggaaca cgaagtaggg gacccgaacg
     8641 aacgtggcca gcagcgcggc ggccacgagc agcaagacga tggctccccg gagtgggtgg
     8701 gacggcggag acggcgggtc gtccgccagt aggttctcct ccatggacgc ccagcctgcc
     8761 atggtgccga ccagcaaccg catcgggtct acgggccgac acgtggatga accccgatga
     8821 gccgccgatc ctttctgaac cgatccctgc cgcccaccgg cgacctggaa tacgccgtgg
     8881 accgaccgtg gagccccggc gcccgtctcg gcatctggtt ccatccgccc catcgagtgg
     8941 cgaccggccg gcgggcgcgg atccgctggt ggcaccgcgt ccgctccgtc gtcctactgg
     9001 ccttcttcgt cgtatttgga ggcatcgctc tggccaccgt cgtcggtgtg gggatcttcc
     9061 tttcgggttt cctcatcgag cgggccatcg gctgagaagc cgccccggtg accaacccca
     9121 acgcgaacaa cgaatctgac cccgacgggc atcccggcga gaatcctgcg ccgcccatca
     9181 atcggcacgt ccatcctgat ccgcctccca cgccggaggt ggccgagcgt cgccgacatg
     9241 ccgtgctggc tgggcacacc ggcgacgtcg aaacggcccg ctcccttcgt ctcgaccccg
     9301 agccggtggt tcgcgccgcc gccctcggcg ccctggcccg cgccggtggg ctcaccgacg
     9361 acgagttggc cggcgggctc accgacacca acgctgcggt tcgcagacgc gccctggaga
     9421 tcctcggtgc ccccgaagag ccagtgagca agtcggccgg cgccccatct gggtcattgg
     9481 ccgatctgct ggcccgcctg ctggctgacc tgctgagcga tcacgacccc acagtggtag
     9541 aggtggcctg ctgggcggcc ggcgaacacc ccggcagcgc caacgtgctg gtcagacctc
     9601 tggtggcggt ggccggtacc ggatcgggcc ccgaggccga acgacccggc catcctgacc
     9661 acctatgccg ggaggcagcg gtggccgccc tcggcgccct cggtcacgaa gctggacggg
     9721 aatcggtcct ggccggactc acccagaagg ccaccatccg ccgccgggcg gtgctggccc
     9781 tggccgcttt cgaaggcgac gatatcgaag ccgctctggc cgaggcactg gacgaccggg
     9841 actggcaggt ccgccaagct gccgaggacc tcctaggtgt ggatcccggt cccggctagc
     9901 gccggccttc catgaacatc acccgcatgg cctcgaacga ctcgatgcag tggccggcac
     9961 ccagcacgac gcattccatg ggagtctcga ccttcaccac cggtacgccc gcatcctcgg
    10021 cgatccgtac gtcaagtccc cgtagcagac tccccccgcc caccaggcag atcccgtggg
    10081 ccaacaggtc ctgagccagc tccggtggag cctgggccag gcactgaacc accgactcga
    10141 ccatggcggc caccggctcc tcgatggccc gacggatctc cagcggggtt agcaccaccg
    10201 tcttggggag gccgctcatg agctcccgtc ccttgacctc cgcccggccc tcctcgggcg
    10261 ttggcgccgc cgaaccgatc gtccacttga tctcctcggc ggtgcgctcg ccgatggcca
    10321 gtccgtactc ccgacgcacg tacgcctgga tggcggcatc gatgtcaaac gacccgaccc
    10381 gcaccgcctc gagggccacc acccccccca gtgagagcaa cgcggattcc gacgtgccac
    10441 ccccgatgtc gacgaccatg ttcccgaccg gttcggagat cggcaggttc gcgcctatcg
    10501 cagcggccaa cggctgctcg atcaactggg cgtcggtggc gccggcccga cgcgctgcgt
    10561 cggtgaccgc acgccgctct acagcggtga tggccgacgg gacgcagatc aggaccttcg
    10621 gccggttaaa ccggctcacc ccaacccgtt ccaacagcag gcgaaccatc cgctgggtca
    10681 cctcaaagtc ggtgatggcc cccttgcgga gtggccgctg ggccaccacg tgctccggtg
    10741 tgcggccgat catgtgccac gcctcgtcgc ccatggcaag cacctcgctg gtgcgctcgt
    10801 taatggcgat caccgatggc tcagccagca ccaccccctc acctcgggca tagaccaggg
    10861 tgttggccgt gcctaggtcg atggccaggt cccgtgccat gaggtcagcg cctctctgat
    10921 ccggtgtcgg aaccggatcc gggctcttcg gacgaagcgt ctccgagcac acggatacca
    10981 ccggtcccaa gggcacccgg tccgcgggcg ggcgctccac cgccggggcc atgccgaagg
    11041 gcccgcagat tggcacgtgc ctggttcgga tcctcaacga ccttcttcgg acggctgaac
    11101 agccagacga ccgccgagag cacgacggcc agactgaccc caccagccaa gaacaggact
    11161 gctggattca cacggcctcc tggggactgt cctgtggcgc cgagcctggc acctcgatca
    11221 cgtgctgggc atccacaccc cagtgctcgc caccggccca cgcctcgctc ttccagatcg
    11281 gcacagtttc cttgagcgtg tcgatgcacc accggccggc gtcgaacgcg gtgtcccggt
    11341 gaggcgacga cacggccacc accacggccg tctcgccaat ggccaacggt ccggtccggt
    11401 ggatcagggc gatgcgaccc aggtcaggcc atcggttccg agcctcgccg gccagtcgcc
    11461 ctagcctcgg gaccacctga gactcgtacg cctcgtattc cagtgcggtg acctccgggc
    11521 gcccctcggc atggtcccgg gcgtcaccac ggaacaccac gacggcccca cagtcgtgtc
    11581 gcccgatcca accggttact tcgtcgacgg gtagtgggcc gtccgtcaac gccacccagg
    11641 tctcgtcgtc cggaccgtcc actagatcgg ggacaacacc cggaccggcc ccagagggac
    11701 ggccatcaga aggggtctca ccggccatcg gtcgcatcgt agggtgcccg acccgacccc
    11761 cgggggcggc ggatcagacg cactattaac cggcccagga tgagcaccag aaccccagct
    11821 acggccagtg agacctgctg gcgagcctgg gcgtccatgc ggtccagcag gcccggttcg
    11881 tggccggcca cgtaggcctc ctcgttggaa tgggtgggta cccagccgag attccggaga
    11941 cggtcgttgg ccaccaccca cgggtgaacc gagtagggga acacccccgg gggggccgga
    12001 gacaacccgg ccttccataa agcccgggtc accagggcag ctaccggacc gggcagacgt
    12061 agccggggac cgggaccacc aagctcggcc atgacctcca cgccgatcca tccgtcgggc
    12121 gccacgttca acggtccgtt gtaacgggcc tgcacggcac acaccgcggc ggacgctagg
    12181 tcgtcggaat gcagaaactg ccccaacggc tcgccctcgt cgctacggat ggatgccgcg
    12241 gcgccgacga cggtggccag gccgcccgga cgctcctcgg cgacagtcac cgctgcacgc
    12301 agcacggtca acgcacggtc gtctgactcg gcggcccacg ctccggccag ctcctccatc
    12361 cgggccctat gcacggcgaa ggcaaaatcc gggcacggtc gtaccggagc gtcctcggtc
    12421 agcggcaccg ggttgtcggg ccacgctccg tagaccatgg ccgaagagcg gacgacaaga
    12481 tgagtcaccc cggcatcgga cgccgcagcc agtaaccgtt ccacgaccgc caggcggtcg
    12541 cggccctcgt cggtgtcctg atcaccagca gtcaccccgg ccgccaggtg aaccactacc
    12601 tcgacgtcgg ccaactgtga acgcaggtca gtgaccgcca ggtcgaccgt acgtagttct
    12661 atttcgggcg ctggcgcagt gctcgaccgt cgatccaagc cgatgacctc gtgcccggcc
    12721 gcggccaggc ctacacagag ctgccgtccg accgcaccgg tcgatccggt gaccacgacc
    12781 cggctcatcg ggaacggccg gtactcatag ggagcggcaa gtccgccggg tggcggatcg
    12841 cgggtagtcg ggggaagtca ctcccataga gtgccctcgt gagccccgag gatccaccag
    12901 aggacccgtt cgccgccttc acccaggcgt tcggcagcat gtttcccgga atggatgcgg
    12961 ggatgccttc aggtaccggc cttcccggaa tgggccaggc cggcgccgat ccggcccgcc
    13021 agatcgccat ggccatcgcg tcagaagggg ccagcgagcc gaacgtcgac ccgatggtcc
    13081 gcatggagta cgagtcccta ctgcgggtcg ctgaactcca ggtcgcgtcc tgcaccggcc
    13141 tcaccgtggc ccgctcgggc gcactgtcga tccgaccggt gactcgaacc gtctgggcat
    13201 catcgtcggt cgacgcctac cggccgtacc tatccaagat ggcccagttg ccgaccgatc
    13261 tggctggtga tctcggcgtc ggttcgggtc ttgagataga cggtgagccg atcgaccccg
    13321 atgatccccg cggcgagcag accctccagt ggctatcggg cctcatggca gccatggcac
    13381 caatgatggc cgggatgacc accggcacga tggtcggtcg cctcgccctc cgcagtctcg
    13441 gtacctacga cctccccatc ccccgtccga ccggcggatc cgacgccgac accctgctca
    13501 tcgtgtcccc caacgtcgag gcgttcagcg ccgactggag ccttcccgcg gacgaccttc
    13561 ggctttggat ctgtctccat gaggtcgccc atcatgcggt gctcggcgtt ccccacgtcc
    13621 gtcacgccat cggcgacctc ttggcccgtc acgccggggc gttccgaact gaccccgccg
    13681 agctaagcga ccgactggag ctgggcctcg aagatctccc gggcctcaac cctacgaatc
    13741 ccgatccggc tgccggagcc gacgcactgg cccgtctcca ggatgcgctg gaccccgaag
    13801 ccgtactggg cgccgtgcga tctcctgaac aagaagtgct gctgccccac cttgaggccc
    13861 tggtggctgt gacggtcgga gtagtcgacc atgtaatgga cactgtgggc accggactca
    13921 tcggctcgta cggccaggtg accgaggcgc tgcgccgccg ccgagtgacc acgtccgacg
    13981 ccgaccgttt cgtagagcgc atcctcggcc tgaacctcac ccaggaacag gtcgaccgtg
    14041 ggtccgcctt cgtgaccggt gtcgtggagc gggcgggcga agatggactg gccctgctct
    14101 ggaccgaggc ccgcaacctc cccaccccct cagaggtgga cgcccctggg ctatggctgg
    14161 cccgccttga acttcccgat ccgccgtcgg acgactgacc ggtcgggatc cggcgctcag
    14221 cccccgccgg ggtcgccgcg ccgccagaag ccgaactgac catcgggccg gtccggttcg
    14281 tccggggtct cgatgcgtgg aatcggcggt gttgccaaac cgaaccaagt gagcgccgca
    14341 gcgaacaacg ccgcaatgaa taggtaaccg acctcgatcg acagcggaag gaacaccgcg
    14401 aggaacgccc cgacggccca tgccagctgg aaacgaccct cgaacttggc aaacgaccga
    14461 ccgtggttgg tgccaggcgc atcccgctgg accaacgagt cgaaggccaa cttggccgtc
    14521 ccactgcaca tggccaccgt gccgccgact aggacggccc cccagagccc tcccaaccac
    14581 acggccagtc ccgacaacgt caccccaacg aagagcacac cgcgaatgat ccgttcttcc
    14641 agaaggcgag ttcgcaggac cggtgagaac tgggcggcgg cgaaggctcc cagcccgacc
    14701 gaggcgagta ccaggccaaa gtgccaagcc ggtgcgggtg cggcagccag cacggactca
    14761 cctcggacca accccgaacc cgcaccagcc ggtcggccga ccgactcgat cgacacaccg
    14821 ccaccaccac ctcggaactc gaaagccagc aagaacgatg tgaagccgac c
//
LOCUS       DASCMR010000293         2720 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001418960, whole genome shotgun sequence.
ACCESSION   DASCMR010000293 DASCMR010000000
VERSION     DASCMR010000293.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2720)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2720)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2720
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001418960"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            225..1334
                     /locus_tag="QGG16_06955"
     CDS             225..1334
                     /locus_tag="QGG16_06955"
                     /inference="COORDINATES: protein motif:HMM:NF018452.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1214 domain-containing protein"
                     /protein_id="HJP25047.1"
                     /translation="MSETRAAWAELLEVLAEAGERFAGKEWMVVDDRDVAEGHRTIAH
                     ILQSGLVSHAEFDPERPVWRRIVTPTRKFSGDNADAIYFEAPIRGDCTYRITGNLTQA
                     VYTAFTVEAGANDGSYPDRTDGMLNDTQFDVAADGSYEITLGGEPQDRNWLRLSADAG
                     RLTSRHYFEWESSAAGADLHLPLTIANLNPPDEPPPPWDDDLVAAAIRRVANHVRSKT
                     IDGPQRAGRAAPPDWVGQIPNEFPVPQEPGDVALSAADAHYSLSRWLLGPDEALVITG
                     RWPVCRYASVCAWNRFQQTLDYVNRPVSRNRATTALEADGSFRMVVAHADPGIPNWID
                     TEGRASGTLFFRFFLAEGDIDPLGAEVVPFAEIGT"
     gene            complement(1417..>2720)
                     /locus_tag="QGG16_06960"
     CDS             complement(1417..>2720)
                     /locus_tag="QGG16_06960"
                     /inference="COORDINATES: protein motif:HMM:NF015043.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carotenoid oxygenase family protein"
                     /protein_id="HJP25048.1"
                     /translation="EVLALDLPVTGTLPEELEGRWLRNGPNPLGPTDPATHHWFLGDG
                     MVHGVRLCGGRAEWYRNRWVRGPRVAEALGEPRPAGTSFGDRDFGPNTSVGGFAGKTW
                     AMVEAGTTPMTLTYELDTIDYDDFEGSLPAGFTAHPKFDPTTGELHGVCYAYPDLPDR
                     VQHVVVGPEGTVSSVTDVPVDGMPMVHDMSLTETNVLIYDLPVCLDLDMAVGGSPFPF
                     SWNPNHPARVGVLPRAGTADEVVWCEAPQAYVFHPVNAYDTGDGGVVVDVCRYDSMFD
                     QDRRGPIGDSAPTLARWTVDSTTRRVTEKPLVDGHHEFPAHDPRVVTRPYRYAYTADG
                     LTLGPTTRIDVETGTSVIHDHGKGRYGAEPVVIPKDGSTTEDDVWVLVCVNDRAGGPA
                     ELVVLDGGDLASPPVARVHLPRRVPDGFHGSWIPDSSVPPP"
BASE COUNT          489 a          880 c          862 g          489 t
ORIGIN      
        1 ggggtgggtg gggcggatcg ttggccgtca tcgacgtgga ggcccgcatg tcagtggcct
       61 atgcgatgaa ccaaatgtca cccaatacgc tcggcgacgg tcgggctggc cggatcctga
      121 tggctgccca cgcggccctc ctgtaactcc ccagctgaac catcggcgcc ccaacacttg
      181 ggccgtttgc cgcaatgatt ggttgagatc caggaggaaa gcagatgtcc gagacacgtg
      241 ctgcatgggc tgagttgctc gaggtgttgg ccgaggccgg tgaacggttt gccggcaagg
      301 agtggatggt ggtcgacgac cgcgatgtcg ccgagggcca ccgcactatc gcccacattc
      361 tccagtcggg actggtaagc cacgccgagt tcgatccgga acgaccggtg tggcgccgta
      421 tcgtgacgcc gacccgcaag ttcagtggcg acaatgccga tgccatctac tttgaggccc
      481 cgatccgggg cgactgcacc taccggatca ctggcaactt gacccaagcg gtgtacacgg
      541 cgttcacagt ggaggccggc gccaacgacg gctcgtaccc ggaccgcacc gacgggatgc
      601 tcaacgacac acagtttgac gttgccgccg acggctccta cgaaatcacc ctcggaggtg
      661 agccccaaga ccggaattgg ttgaggctgt cggccgatgc cggccgcctc accagccgcc
      721 actacttcga gtgggagtcc tcggccgccg gcgccgatct ccacctaccg ctgactatcg
      781 caaacctcaa cccacccgac gaaccgccgc caccctggga cgacgaccta gtggctgctg
      841 ccatcagacg ggtagccaac catgtaagaa gtaagaccat cgacggtccc cagcgggccg
      901 gacgagccgc gccacccgac tgggtgggcc aaatccccaa tgaatttccg gtgcctcagg
      961 aacccggcga tgtcgctcta tcggccgctg acgcgcacta ctcgcttagt cgctggctcc
     1021 ttgggccaga tgaagcgctg gttatcaccg gccggtggcc cgtgtgtcgt tatgccagcg
     1081 tctgcgcctg gaaccggttc caacagaccc ttgactacgt gaatcggccg gtgagtagga
     1141 acagggccac tactgccctc gaagccgacg gctcgttccg tatggtcgtg gcccacgccg
     1201 accccggcat ccccaactgg atcgacaccg agggtcgggc ttctgggacc ctgttcttcc
     1261 gcttctttct ggcagagggc gacatcgacc ccctgggcgc cgaagtggtc ccgttcgccg
     1321 agatagggac ttgactctgt catccctccc ctgagggggc gggcgtcacc agcgccccaa
     1381 ggtttctctc agtgatggtt gacgcagcct tggcactcac ggtggtggca ctgaggagtc
     1441 gggtatccat gaaccatgga atccgtccgg gaccctgcgg gggaggtgta cccgggccac
     1501 cggcggactt gctagatcac ctccgtcgag gaccactagt tctgcggggc caccggcccg
     1561 gtcgttgacg cataccagca cccagacgtc gtcctcggtg gtcgagccat ccttggggat
     1621 gaccactggt tcggctccgt aacgtccctt gccgtgatcg tgaatgaccg aagtgccggt
     1681 ctccacgtcg atccgggtgg tcggtcccag cgtcaggccg tccgctgtgt acgcataccg
     1741 gtagggcctg gtgacgaccc gtgggtcgtg ggctggaaac tcgtggtggc cgtcaacgag
     1801 aggcttctcg gttacccgcc gggtcgtcga atccaccgtc caccgagcca gtgtcggggc
     1861 gctgtcacct atcgggcctc gtcgatcctg atcaaacatc gagtcgtacc ggcatacgtc
     1921 gaccaccacg ccaccatctc cggtgtcgta agcgttgaca gggtggaata cataagcctg
     1981 tggggcttcg caccacacca cctcgtcggc cgtaccagca cgaggcagga cgccgacccg
     2041 agccgggtga tttgggttcc aggagaacgg gaagggtgaa ccaccgacgg ccatatcaag
     2101 gtcgaggcat accggaaggt cgtagatgag gacgtttgtc tcggtcagcg acatgtcgtg
     2161 gaccatgggc attccgtcga cgggaacgtc ggtcaccgag gacaccgttc cttctggacc
     2221 gacgaccaca tgctgtaccc ggtctggaag gtcggggtac gcgtagcaga cgccgtgtaa
     2281 ctcaccggtc gtcgggtcga acttcgggtg ggcggtgaag ccggcaggga gtgagccttc
     2341 gaagtcgtcg tagtcgatgg tgtccagttc gtaggtaagg gtcatcggtg ttgttcctgc
     2401 ctcgaccatg gcccacgtct tgccggcaaa cccgcccacg gaagtgttag gcccgaagtc
     2461 tcgatcgccg aaggaggtcc cggcggggcg gggctcccct agcgcctcag ccaccctcgg
     2521 gccacggacc caacggttgc ggtaccactc ggctcggccg ccgcacaacc tcacaccgtg
     2581 aaccatcccg tctcctaaga accaatggtg ggtggccgga tcagttggcc ccaggggatt
     2641 cggaccgtta cggagccacc ggccctccaa ctcctcgggc aaagtcccgg tcactggtag
     2701 gtccagcgct aggacctcgt
//
LOCUS       DASCMR010000294         5635 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001425614, whole genome shotgun sequence.
ACCESSION   DASCMR010000294 DASCMR010000000
VERSION     DASCMR010000294.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5635)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5635)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5635
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001425614"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..661)
                     /locus_tag="QGG16_06965"
     CDS             complement(<1..661)
                     /locus_tag="QGG16_06965"
                     /inference="COORDINATES: protein motif:HMM:NF019604.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HJP25049.1"
                     /translation="MPVGRDRVTIVGASLAGYWAAETLRRDGFEGAISLIGDEGHEPY
                     DRPPLSKKYLAGEVGRDRVDLGNAEKLAALDLDLRLGRRATGLDVAARTLEVEGVSEP
                     FDGLVIATGARCRTLPGTDGVAGAHTLRTIDDADAVRAAMDGGAERMVVVGAGFIGAE
                     VASTAVARGLAVTMVEALEAPFGRVLGLEMGAVLADVHRGHGVDLRAGVGVDEVLTEP
                     DR"
     gene            complement(665..856)
                     /locus_tag="QGG16_06970"
     CDS             complement(665..856)
                     /locus_tag="QGG16_06970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HJP25050.1"
                     /translation="MRVVVDYDLCESNAICMQIAPDVFEVRDDDFLYVLDENPGDDRR
                     AALEESVQRCPKQAISLED"
     gene            complement(940..2109)
                     /locus_tag="QGG16_06975"
     CDS             complement(940..2109)
                     /locus_tag="QGG16_06975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase domain-containing protein"
                     /protein_id="HJP25051.1"
                     /translation="MGTLGERTAVLGVGQTKYQSTRGDVSIAGLVREAGLRALEDAAC
                     TWADIDAVVIGKAPDFFEGLMMPELFLADALGCVGKPILRVHTAGSVGGSTALVAASL
                     IQGRIHRRVLTIGFEKQSESNATWALSLPQPFSVSINAGAGGYFSPIIRRYMARSGAP
                     ELIGCMVAFKDRQQALRNPYAHLHQADLTFDQVVEAPMLWDPIRFSETCPSSDGACAM
                     VLGDEAAGDAAEGPVAWVHGTAMRSEANNFPGRDEVSPQASRDCAAEVFDKAGITDPR
                     SEIDVVEMYVPFSWYEPMWLESLGFAERDRGWRMVEDGSTNLDGGDLPVNCSGGVLSS
                     NPIGASGMIRFAEAALQVRGMAGNHQVEGARRAFGHAYGGGAQYFAMWVVGADKP"
     gene            complement(2112..3194)
                     /locus_tag="QGG16_06980"
     CDS             complement(2112..3194)
                     /locus_tag="QGG16_06980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-transfer protein"
                     /protein_id="HJP25052.1"
                     /translation="MREVAVVSSAIHQVKALTLTTDVQLMVPLINEARDAVGLTQADI
                     GFTCSGSSDFLAGQGFSFVQTLDAVGAFPPIAESHVEMDGAFALYEAWVKLQIGEVDI
                     ALVYSYGKSSPGSRRDVLAVQLDPYAVAPLWPDAHSVAALQARLLLESGAVTVEELAA
                     IAVRSQRNAVGNPNALRASPDVTVDDVLAGAVVADPLRASDLAAEADGGCVVVLAAGD
                     RARDLCERPVWIRGIDHRIDAHGLGVRDLTLAASAALAAGKAAERAGFAADAVDVAEL
                     HAASTAQAHVLATAMGLGGATSGNGVRIDPSGGSLAADTLMAAGLVRIAEAARWVSGG
                     DADRALAHASSGPCLQQNMVCLLEGE"
     gene            complement(3187..4203)
                     /locus_tag="QGG16_06985"
     CDS             complement(3187..4203)
                     /locus_tag="QGG16_06985"
                     /inference="COORDINATES: protein motif:HMM:NF013920.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HJP25053.1"
                     /translation="MDPAPLRADLVIEYPFTRTTGPVVGAFMTGLRDGRIVGSRRADG
                     RVFVPPAEVDPETGDAIVEMVEVSSAGVVETWTWVDPPRPGSPWEVPHGLALIRMDGA
                     DTPMLHGVLVDSVDDMATGMRVEAVWRDERVGHITDLVGFAPEGTDTNVESAAGETAL
                     TVGVAVAGEPVRSIRTPIRLEYDFIPSAAAQEYLRAYADKRILGNRSPVDGAVFVPPR
                     GVDPRHGVEATEMVDLADTGHVGNFCVTHLPIPGRSDLPTPYVSAWIHLDGADIGFLG
                     LVSGCDLDDVRIGMRVRAVWKPDDELGATAENVRYWEPTGEPDVPVEQAGNQAWSAKG
                     SPDA"
     gene            complement(4265..5347)
                     /locus_tag="QGG16_06990"
     CDS             complement(4265..5347)
                     /locus_tag="QGG16_06990"
                     /inference="COORDINATES: protein motif:HMM:NF012335.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-dependent alcohol dehydrogenase"
                     /protein_id="HJP25054.1"
                     /translation="MLAAILTETPTEELVIADDVTLRDIAPGDVQVKIAHSGVCHSDL
                     SAMNGTIPLAPPAVLGHEGAGVVTAVGDGVTHVAPGDHVIIAFSPPCGTCPYCTGRGQ
                     PNLCLNGMTSMFLNQQFRRGDEVVGSMTGCGTFAEETIVPGIAAVKIDNDIPLDVAAL
                     VGCGVTTGVGAALNTAKVTPGSSVLVIGAGGVGVAAIQGARIAGAAVIVAVDLHEGKL
                     DRAKAFGATHGVTPDDLPAALAEVTGGEGFDFTLECIGMPSTMRQAFDMTRRGGTACI
                     VGVGRAEETFALSAFEMFFSEKTLVGSMYGGADVRTDFNRFLRLYKAGRLDLEGMITR
                     RIRIDEVNDAMSCMGDADVIRQVIDF"
BASE COUNT          993 a         1960 c         1804 g          878 t
ORIGIN      
        1 ccctatcggg ctcggtcaac acctcgtcca caccgacacc ggcacgcagg tccacgccat
       61 gaccgcggtg cacgtcggcc agcacggcac ccatctctag gccgagaacc cgtccgaacg
      121 gggcttcaag cgcctccacc atggtcacag ccaagccgcg agccacggcg gtcgacgcca
      181 cctcggcacc gatgaaaccg gctcccacca cgaccatccg ttcggctccg ccgtccatgg
      241 cggctcgcac cgcatcggcg tcatcgatgg tgcgaagggt gtgcgccccg gccacaccgt
      301 cggttcccgg gagggtccgg catcgggccc cggtggcgat gaccagaccg tcgaacggtt
      361 ctgacacacc ttcgacctcg agggtgcgtg cggccacgtc cagaccggtg gcccggcgac
      421 ctagtcgcag gtcaaggtct agggcggcca acttctcagc gttgccgaga tcgacccggt
      481 cgcgcccgac ctcgccggcc aggtacttct tggaaagggg tggtcggtcg tagggctcat
      541 gcccctcgtc gccgatcagg ctgatggccc cctcgaaccc gtcacgccgc agggtttcgg
      601 cggcccagta gccggccagg gacgccccga cgatggttac cctgtcccgc ccgacaggca
      661 ccagtcagtc ctccaacgaa atggcctgct tggggcagcg ttggacggac tcttcgagag
      721 cagcccgccg atcgtcaccc gggttctcgt cgaggacgta caggaagtcg tcgtcgcgta
      781 cctcgaacac atcgggggcg atctgcatgc agatcgcgtt gctctcgcac aggtcgtagt
      841 cgacaactac tcgcatggcg gctctcctgg tctcggttat ccaaatcggt gtccggaccg
      901 gaagtcggcc gggaccagaa cataggcgcc gcgggcccgt tagggcttgt ccgctccaac
      961 cacccacatg gcgaagtact gggccccacc gccgtaggca tgcccgaagg cccgacgggc
     1021 gccctcgacc tggtggttgc cagccatccc ccggacttgg agggccgcct cagcaaatcg
     1081 gatcattccc gacgcaccta tggggttgga cgacaggacg cctcccgagc agttaaccgg
     1141 aagatcaccg ccgtcgaggt tcgtcgaacc gtcctccacc atgcgccagc ctcggtccct
     1201 ctcggcgaaa ccgagactct ctagccacat cggctcatac cacgagaagg gcacgtacat
     1261 ctcgaccacg tcgatctccg agcgagggtc ggtgatgccc gccttgtcaa acacttcggc
     1321 ggcgcagtcc cggctggcct gtgggctgac ctcgtcccga cccggaaagt tattggcctc
     1381 cgaacgcatg gctgtgccgt gcacccaggc caccgggccc tcggcagcgt cgcctgccgc
     1441 ttcgtcaccc agcaccatgg cgcacgcccc gtccgaggac ggacaggtct cagagaaccg
     1501 gatgggatcc cagagcatcg gggcctcaac cacctggtcg aaggtcaggt cagcttggtg
     1561 aaggtgtgcg taggggttac gaagggcctg ctggcgatct ttgaaggcca ccatgcagcc
     1621 aatcaactcg ggggcgcccg agcgagccat gtagcggcgg atgatcggag agaagtatcc
     1681 cccggcccca gcgttgatgg acaccgagaa cggctggggc aacgacaggg cccacgtcgc
     1741 gttggactcg gactgcttct caaagccgat cgtgagcacc cgacggtgga tccggccctg
     1801 gatcagagag gcagccacca gcgccgtcga accgcctacc gacccggcgg tgtggaccct
     1861 caggatgggc tttcccacac aacccagggc atcagccagg aacaactcag gcatcatcag
     1921 gccctcgaag aagtcgggcg ccttgccgat gaccacggcg tcgatgtcgg cccatgtgca
     1981 ggcggcgtcc tctagggccc gcaggccggc ttcgcgaacc agaccggcaa tggagacatc
     2041 accgcgggtt gactggtact tcgtctggcc gactcccagc acggcggtgc gttccccgag
     2101 ggttcccacc gttactcccc ctccagcagg cagaccatgt tttgttgcag gcagggaccc
     2161 gacgaggcat gggccagggc ccggtcggca tcgccacccg agacccagcg ggccgcctcg
     2221 gcgattcgca ctaggccggc ggccatcagc gtgtcggcgg ccagcgaacc gccagacggg
     2281 tcgatccgaa caccattgcc cgaggtcgcc cctccgagcc ccatcgcggt ggccagcaca
     2341 tgggcctggg cggtgctcgc ggcatgcagt tcggccacgt cgacggcatc ggcggcaaag
     2401 cccgcccgtt cggcggcctt cccggcggcc aacgctgccg acgcggcgag ggtcaggtca
     2461 cgcaccccga ggccatgggc gtcgatgcgg tggtcaatgc cgcggatcca caccggtcgt
     2521 tcacacaggt cccgggcccg gtcaccggca gctagaacca cgacacaacc cccatcagcc
     2581 tcggcggcca ggtcgctggc ccgcagcggg tcggccacca cggcaccggc cagcacgtca
     2641 tccaccgtga cgtcgggcga ggcacgaagg gcgttcggat tgcccaccgc attgcgttga
     2701 ctgcgtacgg caatggctgc tagttcctcg acggtcacgg caccggactc gagcagcagc
     2761 cgggcttgga gggcggccac cgaatgggcg tcgggccaca gcggtgccac cgcgtacgga
     2821 tcgagctgaa cggccagcac gtcacggcgc gagccgggtg atgacttccc gtatgagtag
     2881 acgagcgcga tgtcgacctc gccgatctgg agtttcaccc atgcctcgta gagggcgaag
     2941 gctccgtcca tctctacgtg gctctcggcg atgggtggaa aggcgcccac ggcatccaac
     3001 gtctgaacga aggagaaacc ttgcccggcc aggaagtcgc tgctcccgga acaggtgaaa
     3061 ccgatgtcgg cctgagtgag cccgacggcg tcacgggcct cgttgatgag gggcaccatc
     3121 aactggacat cggtggtgag ggtcaacgcc ttgacttggt ggatggcgga ggaaacgacg
     3181 gccacctcac gcatcgggag accccttcgc tgaccacgcc tggttgccgg cctgttcgac
     3241 gggcacgtct ggttcaccgg tgggttccca gtaccggacg ttctcggccg tggcccccaa
     3301 ctcatcgtcg ggcttccaga cggcccggac ccgcatgccg atccgtacat cgtcaaggtc
     3361 gcaacccgac accagaccca ggaacccgat gtcggcgcca tccagatgaa tccaggcact
     3421 cacgtacggc gttgggaggt cgctgcggcc cggaatgggc agatgggtga cacagaagtt
     3481 gcctacgtga ccggtgtcgg ccagatcgac catctcggtg gcctccacac cgtgacgggg
     3541 gtccacgccc cggggcggga cgaataccgc cccgtcgacc ggcgagcggt tgccaagaat
     3601 tcgcttgtcg gcataggcgc ggaggtactc ctgagccgcc gcgctgggga tgaagtcgta
     3661 ttcgagacgg atgggcgtcc tgatggatcg gacgggttct ccggccactg cgacaccaac
     3721 cgtcaacgcg gtttccccgg cagccgactc gacattggtg tcggttccct ctggcgcgaa
     3781 ccccacgagg tcggtgatgt gaccgacccg ttcgtctcgc cagacggcct cgacccgcat
     3841 gccggtggcc atgtcatcca ccgagtccac gagcaccccg tggagcatcg gcgtatcggc
     3901 cccgtccatt cggatgaggg ccagcccgtg aggcacctcc cacggtgagc cgggtcgggg
     3961 cggatccacc cacgtccacg tctcgaccac accggccgat gaaacctcga ccatttcgac
     4021 aatggcgtca ccggtctcag gatcgacctc ggcgggcggc acgaagaccc gtccgtcggc
     4081 gcgacgtgag cccacgatcc gaccgtcacg caggccggtc atgaaggccc ccaccaccgg
     4141 tccggtggtc cgtgtgaacg gatattcaat gaccaggtca gcccgtaggg gtgcggggtc
     4201 caccgatccg accgtcacca cgtcatatcc ggcgcgtgaa ccaccaccct gggaaccagc
     4261 ctgatcagaa gtcgatgact tgtcggatca cgtcggcatc tcccatgcag gacatggcgt
     4321 cgttcacctc gtcgatccgg atgcgacggg taatcatccc ctcgaggtcg agtcgacccg
     4381 ccttgtagag ccgtaggaac cggttgaagt cagtccgcac gtcggcaccg ccgtacatcg
     4441 accccaccag cgtcttctcg ctgaagaaca tctcgaaggc cgacagggca aacgtctcct
     4501 cggctcggcc tacgccgacg atgcacgccg tgccgccccg acgggtcatg tcgaaggcct
     4561 gacgcatggt gctcggcatg ccaatgcact ccaacgtgaa gtcgaagccc tcgccaccgg
     4621 tgacctcggc cagagcggcc ggcaggtcgt caggggtgac tccgtgagtg gctccgaacg
     4681 ccttggcgcg gtcgagtttg ccctcatgca ggtcgacggc cacgatcacc gcagccccgg
     4741 cgatgcgagc cccctggatg gcggccaccc cgaccccgcc ggcgccgatg accagcaccg
     4801 acgaacccgg tgtgaccttg gcagtgttga gtgccgcacc cacaccggtg gtgacgccgc
     4861 agcccaccag tgcagccacg tccaacggaa tgtcgttgtc gatcttgacg gccgcgatgc
     4921 ccgggacgat ggtctcctcg gcgaacgtcc cgcagcccgt catcgaaccg acgacctcgt
     4981 caccccggcg gaactgctgg tttaggaaca tcgaggtcat gccgttcagg cagaggttgg
     5041 gctgcccgcg accagtgcag tacggacagg tcccgcacgg cggcgagaag gcgatgatca
     5101 catggtcgcc gggcgccacg tgggtgaccc cgtcacctac cgcggtcacc acgccggcac
     5161 cttcgtggcc cagcacggcc ggcggggcca gcgggatggt gccgttcatg gccgacaggt
     5221 ctgaatgaca gacgccgctg tgggcaatct ttacctggac gtcgccgggg gcgatatccc
     5281 ggagggtcac gtcgtcggcg atgaccaact cctcggtggg cgtctcggtc aggatcgctg
     5341 cgagcatcag ggattctccg ttctgggcaa cgggtggtgc ccaagtagcc gacggtaccg
     5401 gtcggatcgt cccggcgaga agcccgccgg acacgcgatc gggtgttccc gctccgtccg
     5461 gagggccgct cttttcgaca ccttcgggac gtggaggctc ccgggcgtgg ctgaaaaacg
     5521 tcgtaccgac ttgcgctagg tccgtcccag atcagtcttg gccacgacga tgccgtcgtc
     5581 gtcggcccac aaccacatgc cgggcacgaa gtccacgcct gccacggtga ccggt
//
LOCUS       DASCMR010000295        14701 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001427792, whole genome shotgun sequence.
ACCESSION   DASCMR010000295 DASCMR010000000
VERSION     DASCMR010000295.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 14701)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14701)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14701
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001427792"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..2557
                     /locus_tag="QGG16_06995"
     CDS             <1..2557
                     /locus_tag="QGG16_06995"
                     /inference="COORDINATES: protein motif:HMM:NF014758.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HJP25055.1"
                     /translation="DELGVTSPKDGCSPSGQCGCCTVLVDGKARVSCQTSMDKADGAS
                     ITTLEGLDEDERQRYAMTFAAHGALQCGFCTPGIVMRTKALLDKASSKGKALERDDAA
                     RHLGAHLCRCTGYVKILDAVESLAAGEVPVPLPRGGVGSSGIKLEACELSLGDRPYVD
                     DLFPEGLLHAALRLADHARADIVRIDTSAAEAIDGVHRVLTADDIPGARRVGIIHTDW
                     PVMIPEGGRTSYLGDVLAVVVADDRETARRAAEMVTVEQVPLTVYSDPVVAVAADEDA
                     VWELDGNVLSVSTYARGDVEAALAGSVHVVEEVFQTQRIEHAFVEPESTLAVPTVLPG
                     DDPSGEGSEDQPGLYVYSGGQGVWDDRNQIASVLDVDTSRITVELVSNGGAFGGKEDM
                     SNQAHAALAAWVTGRPVKCTLSREESLLMHPKRHPIRMAYRAGCDADGRLTGLWVRMI
                     GDSGPYASVGMKVLERAAGHASGPYVLPTIDVEATAVRTNGPVCGAFRGFGANQAQFA
                     MEGVLDRLAEKAGISGWEIRSRNVISPGVVWGPGQIMDDGCLGARACLDEVKDAYDDA
                     VADGRPVGLGLGLKNSGLGNGFKEVARAVVHFRDDGRVEVRHCWTEMGQGVDTVAMQV
                     AVEELGIDPECIDVIVDTTRELGAGQTTGSRGTLMGAGSVADACRNAKADGCRIGVDY
                     EGEYRVDWTNSLNDGVENPIIHSTFGYAAQLVVLDPETGDVDRVVAAHDVGRAVNPML
                     CEGQVEGAVHMGLGYALTEGFPADNEARPRNETLRSLGIIRPKDMPDVDVRLVESPQP
                     DAPYGIKGVGEIGLVPTAGAVAAALHAHDGMWRHSLPMAAPDQQEHWADWDGR"
     gene            2563..3606
                     /locus_tag="QGG16_07000"
     CDS             2563..3606
                     /locus_tag="QGG16_07000"
                     /inference="COORDINATES: protein motif:HMM:NF014081.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJP25056.1"
                     /translation="MDAADGATSPGLVCAHHHLYSSLARGMPAPPRTPAGFTDILELV
                     WWRLDRALDLESIRWSAMLGAVEALERGCTAIIDHHESPEAIDGSLDVIAEACAEVGV
                     RVSCTYGITDRHGADGARRGLAENERYLRAGGRGMVGIHAAFTCSDASLEAAAGLAAD
                     LGVGVHVHVAEGTADVGAADRLRPLATDDWLLVHGVHLDDDHGLAGTFVHNPRSNMNN
                     SVGYARPTRFANPVALGTDGIGADMLDEFRVAYVRHREDDVTASPETAWGWLTTGWDL
                     FPEARNDRVTWDYPHMDPWRLAFTTGVGPRTVEVDGAVVLADGRPTRVDADEVRIRAA
                     EQAVRLHRRLEEI"
     gene            3620..4621
                     /locus_tag="QGG16_07005"
     CDS             3620..4621
                     /locus_tag="QGG16_07005"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HJP25057.1"
                     /translation="MTRLAIYLQDAHPITEAMQYVTYAEQRGFEAVWQADSRLVRDAV
                     VPMAAFATCTETIKIGSGVVDCWTRNPARLASTFSTLDDLAPGRMILGIGAWWEPLAS
                     KVGVQRRRPLTAIRETVEACRLLLADETVTYDGEFVHLDGVELDYVYQQRRPKDVPIY
                     IGATGDKMLELTGEIADGVVLNYLVSPEYNRKAMDRLADGAARVGRSVDDLDRPQLVV
                     CSVAETRAEALDGARLMVTQYLGQQPHIMKASGVPESLLEEIGRVLTWPATHEQVKAA
                     SKLVPDDVVQMICAAGTPDEVREKVGQYMADGCTCPILYPLGPDVRMMIDTFADWTP"
     gene            4618..5949
                     /locus_tag="QGG16_07010"
     CDS             4618..5949
                     /locus_tag="QGG16_07010"
                     /EC_number="3.5.4.32"
                     /inference="COORDINATES: protein motif:HMM:NF006055.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxoguanine deaminase"
                     /protein_id="HJP25058.1"
                     /translation="MTTFPAREGSSVPEDRLVLRGARHPGDVAIVDGRITAVGIVAPE
                     SGDKEVHCEGDIITAGLVNTHHHLYQWMTRGRATGCDLFQWLVELYPVWGRLSVDDVR
                     AAALVGLGELAATGCTTASDHHYLVPGGDDTVFDAIVDAARTVGIRLHLSRGSMDLGE
                     SAGGLPPDHVVEDRDAILTSTESVIARHHDGDMVFVTVAPCSPFSVTTGLMVESAELA
                     RSYGLRLHTHLCETIAEQEHCLERFGRRPVEMLDEWGWVGDDVWLAHGIHIDDDEMAR
                     LGSAGTGIAHCPSSNARLAAGMCRVADLRAAGCPVGLGVDGVASNEVGGLFPELRQAL
                     YTARLRERRPDALMPADVVEMATTSGADCLGMADTGRLAVGMRADLAVWPGDDLGDMA
                     DPVAGLVLGPDRRVRHLLVGGRVVVTDGELAGVDLRTAHRDLAQRARALWD"
     gene            5981..6217
                     /locus_tag="QGG16_07015"
     CDS             5981..6217
                     /locus_tag="QGG16_07015"
                     /inference="COORDINATES: protein motif:HMM:NF014022.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-binding protein"
                     /protein_id="HJP25059.1"
                     /translation="MSTVAEFTIEPFVEGDPGPHVKAAIAVAEAAGLDVEVGPFGTAV
                     EGETIAVLDAVDAVVRAAVANGATRVSLQLTVAG"
     gene            6356..7435
                     /locus_tag="QGG16_07020"
     CDS             6356..7435
                     /locus_tag="QGG16_07020"
                     /inference="COORDINATES: protein motif:HMM:NF014647.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HJP25060.1"
                     /translation="MRRRIAGLLAVVLSLTLVATACGSDDEDATKAAFIYVGPVGDAG
                     WTYAHDQGRAAAAAETGVETAYVEAVPEGTADFGNHVRDFIDQGYNVIFGTSFGYMDD
                     MEALADEFPDVVFDHISGYKANGTNFGNSFGRMYEPRYLSGMVAGSATSSNLIGYVAA
                     FPIPEVIRGINAFTLGVREINPAAQVEVVWTSTWFDPVVEGDSAQAMLDKGADVIAMH
                     QDSTAAGEKAEAAGARWVAYNSDMSAHAPAAHLTAPVWDWGPRYAEVIGQATAGTYEG
                     GYYWGSMADGTVDLAPIASDVDASVVAAVAERKQQIIDGSFHPFQGPINAQDGSVLVA
                     AGETMSDGDMLGIGVFVEGVVGSAG"
     gene            7589..9184
                     /locus_tag="QGG16_07025"
     CDS             7589..9184
                     /locus_tag="QGG16_07025"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJP25061.1"
                     /translation="MTEPPHPTGLANTSEKPDGVAPADGPPAVELRDIWKRFPGVVAN
                     AGAHLRVRRGSVHAVLGENGAGKSTLMNVLSGVYRPDEGDVRIDGMAHHFRTPADALA
                     AGVGMVHQEFRLVPSFTVAENVVLGACERIVRRSAVELAVGALAERFGLATEPNRPVW
                     QLSMGERQRVEILKALWRDARILILDEPTAVLTPGEADELGAVLRHMADDGRTVVFIS
                     HKLHEVMGFCDEATVLRGGKTVAASLSVADTDASELAGLMVGASPVITERPPLREAGE
                     VRLEVRDLRCLDDRGLNGLEGMDLAVRSGEIVGIAGVAGNGQRELTQCIAGLRPVESG
                     TIHLIGEDRTDATPRQRFADGLGYIPEDRLGVGLAPRLSVTDNAVLRTYGRHRRGPFL
                     DFAAAASHCRDLVDQFGVRTGPLDEPIAGLSGGNLQRLLVGRELVDGPRVVVAAQPTR
                     GLDVQGVKAIQDLLVGERDAGAAVLLISEDLDELLTLADRLLVIHAGRIVAEFDPTTA
                     ERHAIGEAMVGHAVPADDQVANR"
     gene            9217..10281
                     /locus_tag="QGG16_07030"
     CDS             9217..10281
                     /locus_tag="QGG16_07030"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP25062.1"
                     /translation="MLVRREQVLRGGQPLAFGIGLAVALVVGIVLLVGSGHDPMRVYE
                     RMFEASLGDPRAWSVTLNRAVPLGLAGLAVAVAGSMGLWNIGAEGQIMAGAVGAAWVA
                     RIGGEWPSPLLIAAMLAAAILGGGLLALGPAIARARIGVNEIITTLMLNEVAIRLVQW
                     LVHGRWKDPDSHNFPLAPMLPDNARLPGLFERAHVGVVLAAIVILLFGVASSRTAWGY
                     ELRVAGSSGATARYAGISLERKILTVLVLSGGVAGFAGGIELSGTSDRITESLSNGFG
                     FAGIIVAALALMRPSGVAAVAVLFGAVQIGGQSIQTMGVSSSVSTILQALILFGAIAA
                     GVLSRYRVEMVAGDTTEVTS"
     gene            10278..11210
                     /locus_tag="QGG16_07035"
     CDS             10278..11210
                     /locus_tag="QGG16_07035"
                     /inference="COORDINATES: protein motif:HMM:NF014684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP25063.1"
                     /translation="MNEASLIGLFEATVSFGALLYLAALGEMIAEKAGILNLGVEGMM
                     AMGAVTGFVVALQTGNPWVALVAAVAAGAMIGLLHGFFTVVLGAEQVVSGLSLTILGL
                     GLAAFVGRGSVGEPAGAEMVSVDWGPLSDIPWAGPILFAQSPFVYLAVITGFVTWFVL
                     WRTRLGLAIRAAGESASTADAAGHSVVGIRLAAVATGGGLAGASGAYLTLSLTPQWAD
                     GIVAGRGWIAVALVIFGAWRPGRVAVGALLFGLTLALKTRLQTFGVDFSPILLSMLPY
                     LLTISVLVAISIRSRNRPSPAPAALGIAYRREER"
     gene            complement(11241..12440)
                     /locus_tag="QGG16_07040"
     CDS             complement(11241..12440)
                     /locus_tag="QGG16_07040"
                     /inference="COORDINATES: protein motif:HMM:NF012512.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent lyase/thiolase"
                     /protein_id="HJP25064.1"
                     /translation="MGALPTGRLTDDTNPFVAFRTLLWSHHRAIAAGWSDTRYVDTVR
                     RFDDAVAAVDGHGFRTTPLVRQIALADAIGQTGGIWAKDETGNVSGSHKARHLFGLAL
                     HLLVDEVPTDTTLAISSCGNAALAAAIVARAAGRPLAVHVPTWADITVLDRLDDLGAD
                     VRVCQRRDGEAGDPCILRFRELVATGAVPFTCQGIEAPWTIDGGRTLGFELVTGLTAH
                     DRSPTRLLVQVGGAALASSIVQALTDAVDLGGSDVLPGGRPPLVAVQTEGCAPLARAF
                     NRVADADDPVAALAEHDGPHMWPWDDPGSAATGILDDVAYDWRPVVHDMLLGPVPGGP
                     VVALETDVVEAHRLVRTHTSVPADPTGTAGLAGLLAARRDGCIEADEEVVILLTGVER
                     ALTGPRS"
     gene            complement(12524..14107)
                     /locus_tag="QGG16_07045"
     CDS             complement(12524..14107)
                     /locus_tag="QGG16_07045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HJP25065.1"
                     /translation="MSSSSNAISSDNSSVGIGSFDAVEFDPATFDPARFGLATGIVDE
                     VGYQRSVERFRTQGIALPTFAQMGDPSTIPDAIRASLAGVDRNAADARNLYRVHWYND
                     LYGGLVDVPEHVVLTPEMTGVPSPIIVAFGNRFPMIGAHKVLAAYACLVPRIVTGEYD
                     PTLHRAIWPSTGNYARGGVAISRLMGCRGVAVLPENMSRERFEWLEEWIADPGDVIRT
                     TGSESNVKEIYDACDELAKDPGNFILNQFTEFANHVGHHEVTGRALEHLYLHHAAQHP
                     GLRLAGYVAASGSSGTLAAGERLKADHGARIAAVEAVECPTMLYNGYGEHNIQGIGDK
                     HIPFIHNVTNTDVVVGVSDRACDELGVAFASPEGRAHLSAAGVDDAVLNTLGHFGLSS
                     LCNVIASIKVSRELDLGPDDALVTVATDGGEMYGSERESMMAGRYAAGFSGAEAGTAI
                     DTHLLGADTDHVEVLTETGRNRIFNLAYYTWVEQHGVDFADFEVRRNQDFWRHIQTFA
                     PSWDTMIDEFNGRTGVLAD"
     gene            14244..>14701
                     /locus_tag="QGG16_07050"
     CDS             14244..>14701
                     /locus_tag="QGG16_07050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25066.1"
                     /translation="MTRRVLDLVLALALVGAGVVVAARVAEPSMRPVLYPPSASPSPA
                     LPTPTIPATTVVPTTTAAPGTTTVSPVAAATTTVPPATTTTTTAAPVDEEAVLTASYV
                     WGRSTEAVLLQTVLGVEADGWYGPGTREAHLAENAVRGLSVDAVPAPPTTT"
BASE COUNT         2262 a         4781 c         5193 g         2465 t
ORIGIN      
        1 cgacgaactg ggggtgacct cacccaagga cggttgctca ccctccggtc agtgcggttg
       61 ttgcacggtt ctggtggacg gcaaggcgcg ggtgtcgtgc cagacgtcca tggacaaggc
      121 cgacggtgcg tcgatcacca cgctggaggg tctcgacgag gacgagcggc agcggtacgc
      181 catgacgttc gccgcccacg gcgctctgca gtgcggcttt tgcaccccgg gcatcgtcat
      241 gcggaccaag gcgctactgg ataaggcatc cagtaaggga aaggcattgg aacgcgacga
      301 cgcggcccgg cacctgggcg cccacctatg tcgctgcacc ggctacgtga agattctcga
      361 cgccgtggag tccctggccg ccggcgaggt gccggtaccc ctgccccgcg gaggcgtggg
      421 atccagcggc atcaagttgg aggcctgcga actctccctc ggcgatcgac cctacgtcga
      481 cgacctcttc cccgagggtc tgctacacgc ggcactgcgg ttggccgacc atgccagggc
      541 cgacatcgta cgcatcgaca cctcggccgc tgaggcgatc gacggcgtcc atcgggtgct
      601 cacggcggac gacatccccg gagcccgtcg ggtcggcatc atccacaccg actggccggt
      661 gatgatcccc gagggggggc gcacctcgta cctcggcgac gtgctggccg tggtggtggc
      721 cgacgaccgt gagacagctc gccgggccgc cgagatggtg accgtcgagc aggtgccgct
      781 gaccgtgtac agcgacccgg tggtggcggt ggccgccgac gaggacgccg tctgggaact
      841 ggacggcaac gtgctctcgg tctcgaccta tgcccgcggt gacgtagagg ccgcgctggc
      901 cgggtccgtc cacgtggtcg aggaggtctt ccaaacccaa cgcatcgaac acgccttcgt
      961 ggagcccgag tcgaccctcg ccgtgcccac ggtccttccc ggcgacgacc cgtccgggga
     1021 ggggagcgag gaccagcccg gcttgtacgt gtactccggt ggccagggcg tgtgggacga
     1081 ccgcaaccag atcgcctcgg tcctcgatgt cgacacatcg aggatcaccg tggaactggt
     1141 gtccaatggc ggggcgttcg gcggtaagga ggacatgtcc aaccaggccc acgcggcgct
     1201 cgccgcctgg gtcaccgggc gtcccgtcaa gtgcacgctg tcgcgtgagg agtcgctcct
     1261 catgcatccc aagcgccacc cgatccgcat ggcctaccgg gcgggctgtg atgctgacgg
     1321 caggttgacc ggcctgtggg tacggatgat cggtgactct ggcccctatg cgtcggtcgg
     1381 catgaaggtt ctggagcgag ccgccggaca cgccagtggc ccctacgtgt tgcccaccat
     1441 cgacgtggag gccaccgcgg tgcgaaccaa cggcccggtc tgtggcgcct tcaggggctt
     1501 cggggccaac caggcccagt tcgccatgga gggcgtgcta gatcgcctcg ccgagaaggc
     1561 cggtatctcc ggctgggaga tccgcagccg caacgtcatt tccccgggag tggtgtgggg
     1621 gccgggtcag atcatggacg acggctgcct aggggcccgg gcgtgcctgg acgaagtgaa
     1681 ggacgcctac gacgacgcgg tggccgatgg ccgaccggtc ggtctcggcc tgggcctcaa
     1741 gaactcgggc ctaggcaatg gcttcaagga agtcgcgcgg gccgttgtgc acttccgcga
     1801 cgacggccgg gtcgaggtgc ggcactgctg gaccgagatg ggccagggcg tcgacaccgt
     1861 agccatgcag gtggccgtcg aggagctcgg tatcgatccg gaatgcatcg acgtgattgt
     1921 cgacaccacc cgggagctgg gtgccggaca gaccacgggc agccggggca ccttgatggg
     1981 cgccggatcg gtggccgacg cctgtcgcaa tgccaaggcc gacggctgtc ggatcggcgt
     2041 cgactatgag ggggagtacc gggtcgactg gactaactcg ctcaacgacg gtgtcgagaa
     2101 tccgatcatc cactccacgt tcggctacgc cgcccagctg gtcgtgctcg acccggagac
     2161 gggcgatgtc gaccgggtgg tggctgccca cgacgtgggc cgggccgtca acccgatgct
     2221 gtgcgaaggc caggtggagg gcgcggtgca catgggtctc gggtatgccc tcaccgaggg
     2281 gttcccggcc gacaacgagg cccgcccacg caacgagacc ctgcgcagtc tcgggatcat
     2341 ccgccccaag gacatgcctg acgtcgacgt gcgcctcgtc gagtcacccc agcccgacgc
     2401 cccctacggg attaaaggcg tgggcgagat cggtctcgtc ccgaccgccg gggcggtcgc
     2461 cgcggccctc cacgcccacg acgggatgtg gcgccactcg ttgcccatgg cggcaccgga
     2521 ccagcaggag cactgggccg actgggacgg acgctgagtc ccgtggatgc cgcagacgga
     2581 gcgacgagcc cgggcctggt ctgcgcgcac caccacctgt actcgtcgct cgctcggggc
     2641 atgcccgccc caccccgcac gccggccggc ttcaccgaca tcctggagtt ggtctggtgg
     2701 cgactcgacc gggcactgga cctggaatcg atccgctggt cggccatgct cggtgcggtg
     2761 gaggccctgg agcgtggttg cacggcgatc atcgaccacc acgaatcgcc cgaggccatc
     2821 gacgggtcac tcgacgtcat tgccgaggcg tgtgccgagg tgggcgtccg ggtctcgtgc
     2881 acctacggga tcaccgaccg tcacggcgcc gacggagccc gtcgaggtct ggctgagaac
     2941 gagcggtacc tgcgagccgg gggtcggggc atggtgggca tccacgccgc cttcacctgc
     3001 agcgacgcca gcctcgaggc ggctgccggc cttgccgccg acctgggggt cggcgtccac
     3061 gtgcatgtgg ccgaggggac cgccgacgtc ggagcggccg accgcctgcg gccgctggcc
     3121 accgacgact ggctactagt ccacggtgtg catctcgacg acgaccacgg cctggccggg
     3181 accttcgtgc acaacccccg gtcgaacatg aacaactcgg tgggttacgc ccgcccgacc
     3241 cggttcgcca acccggtagc actcggtacc gacggcatcg gggccgacat gctcgacgag
     3301 ttccgggtgg cctacgtgcg ccaccgcgag gacgacgtca ccgcctcgcc cgagaccgcc
     3361 tgggggtggt tgaccaccgg ctgggatctg ttccccgagg cccgcaacga ccgggtgacc
     3421 tgggattacc cgcacatgga cccctggcgg ttggccttta ccacgggggt cggtccccgc
     3481 accgtggagg tcgacggcgc ggtcgtgctg gctgatggtc gacccacccg ggtcgacgcc
     3541 gacgaggttc ggattcgggc tgccgaacag gcggtacgcc tacaccgtcg actcgaagag
     3601 atctgagaga ggaagcaaca tgacccgact ggctatctac ctgcaggatg cacatcccat
     3661 tacggaagcg atgcagtacg tcacgtacgc cgaacaacgc ggcttcgaag ccgtgtggca
     3721 ggccgactcg agactggtcc gtgacgccgt ggtccccatg gcggcctttg ccacctgcac
     3781 cgagaccatc aagatcggtt cgggggtggt cgactgctgg actcgtaacc cggcccgcct
     3841 ggcgtcgacc ttttcgacgt tggacgacct ggcccctggt cggatgattc tgggcatcgg
     3901 tgcgtggtgg gaaccactgg ctagcaaggt cggcgtgcag cgtcggagac cgttgaccgc
     3961 catccgggag accgtcgagg cgtgccggct tctgctggcc gacgagacag tcacctacga
     4021 cggcgagttc gtgcaccttg atggcgtgga gttggactac gtgtaccaac agcgtcgccc
     4081 gaaggacgtg ccgatctaca tcggtgctac gggtgacaag atgctcgaac tgaccggcga
     4141 gatcgccgac ggtgtcgtgc tcaactatct ggtgtcgccc gagtacaacc ggaaggccat
     4201 ggatcgcctg gcagacgggg ccgcccgggt gggccgctcg gtcgacgacc tggaccgccc
     4261 ccagttggtg gtgtgctcgg tggccgagac cagggccgag gccctcgacg gtgcccgcct
     4321 catggtcacc cagtacctgg gtcagcagcc ccacatcatg aaggcctccg gtgtgcccga
     4381 atcgctactc gaggagatcg gtcgggtcct gacctggccg gccacccacg agcaggtgaa
     4441 ggccgcttca aagctggtgc ccgacgacgt ggtgcagatg atctgcgcgg caggcacgcc
     4501 cgacgaggtc cgagaaaagg tgggccagta catggccgac ggttgcacct gccccatcct
     4561 ctatccactg ggccccgacg tccggatgat gatcgacacc ttcgccgact ggaccccatg
     4621 accacgtttc ccgctcgaga aggttcatcg gtgcccgagg atcgactggt cctgcggggt
     4681 gcccgtcacc ccggcgacgt ggccattgtg gatggtcgga tcaccgcggt gggcatcgtg
     4741 gctccggagt cgggcgacaa ggaggtgcac tgcgaaggcg acatcatcac cgctggtctt
     4801 gtcaacacgc atcaccactt gtaccagtgg atgacccggg gtcgggccac cggttgcgac
     4861 ctcttccagt ggttggttga gctgtaccca gtgtggggcc ggctctcggt cgatgacgta
     4921 cgggctgccg cgttagtcgg cctaggtgag ttggcagcta ccggctgcac caccgcgtcg
     4981 gaccaccact acctggtgcc gggcggcgac gacacggtgt ttgacgccat tgtcgatgcg
     5041 gcccggaccg tcggcatccg cctgcacctg tcgcgggggt ccatggatct cggcgagagt
     5101 gccggcggcc taccgccaga ccacgtggtc gaggaccgcg acgccatcct gacctctacc
     5161 gagtcggtga tcgcgcgcca ccacgacggc gacatggtgt tcgtgaccgt cgccccgtgc
     5221 agcccgttct cagtgaccac cggactcatg gtggagtccg ccgagttggc ccgaagctac
     5281 ggcctacgcc ttcacaccca cttgtgcgag accattgccg aacaggagca ctgtctggaa
     5341 cggtttgggc gacgccccgt ggagatgctc gatgaatggg gttgggtggg agatgacgtg
     5401 tggctggccc acggcatcca catcgacgac gacgagatgg cccgcctggg ctcggccggc
     5461 acgggcatcg ctcactgtcc gtcgtccaac gcccgactgg ccgccggcat gtgccgggtc
     5521 gccgacctgc gagccgccgg ctgcccggtg ggtctgggcg tcgatggcgt ggcgtccaac
     5581 gaagttggag gactattccc cgaactccgg caggccctct acaccgcccg attgagagag
     5641 cggcgtcccg atgctttgat gccggccgat gtggtggaga tggccacgac aagcggtgcg
     5701 gactgtctgg gcatggccga caccggtcgc ctcgccgtgg gcatgcgggc cgatctggcg
     5761 gtgtggcctg gcgacgactt gggcgacatg gccgacccgg tggccggact ggtgctgggg
     5821 ccggatcgtc gggtccgcca ccttctggtc ggggggcgtg tcgtggtgac cgatggagag
     5881 ctcgccggtg tggatcttcg gactgcccac cgagacctgg cccagcgagc ccgggccctc
     5941 tgggactgac gcaccgctaa tcatgggcca tgatgagtcc atgtcgacgg tcgccgagtt
     6001 caccatcgaa cccttcgtgg agggagaccc cggcccccat gtcaaggcgg ccatcgcggt
     6061 ggccgaggca gccgggttgg atgtcgaggt cggccccttc gggaccgccg tggaaggtga
     6121 gacgatcgcc gtgctggacg cagtcgacgc agtggtccgt gccgcggtgg ccaacggcgc
     6181 cacccgggtc agcctgcaac tcacggtggc cggttgacct tcggatcgga gctgcagttc
     6241 aggttctccg cctgttgtgg cgcgtattga tgaaacgtgg aatgatcgcc gacgagccgt
     6301 cctggctctc gacgggccat atgggcccgg accggggcgg ccagagggag aaatgatgcg
     6361 acgccgaatt gccggcctgt tggccgtcgt cctgagcctt accttggtgg ccacggcctg
     6421 tggatccgat gacgaggacg ccaccaaggc ggccttcatc tacgtcggac cggtgggaga
     6481 tgccgggtgg acctacgccc atgaccaggg tcgagccgcg gcagcagccg agaccggtgt
     6541 ggagaccgct tatgtagagg ccgtgccgga gggcaccgcc gacttcggca accacgttcg
     6601 cgatttcatt gatcagggct acaacgtcat ctttggcacc tcgtttggtt acatggacga
     6661 catggaagcc ctcgccgacg agttccccga cgtcgtgttc gaccacatct cgggttacaa
     6721 ggccaacggc accaacttcg gaaacagctt cgggcgcatg tacgagcccc gctatctctc
     6781 cggcatggtc gccggttcag ctacctcgtc gaacctcatc ggctacgtgg cggccttccc
     6841 gattcccgag gtcatccggg gcatcaacgc cttcaccctt ggtgtccgtg agatcaaccc
     6901 agccgctcag gtcgaggtgg tctggaccag cacgtggttt gatccggtgg tcgagggtga
     6961 ctcggcccag gcgatgctcg acaagggtgc cgacgtgatt gccatgcatc aggactccac
     7021 ggcagctggc gagaaggccg aagccgcagg cgctcgttgg gtggcctaca actctgatat
     7081 gagcgcccac gctccggcgg cccacctcac ggcgccggtc tgggattggg gcccgcgcta
     7141 cgccgaggtc atcgggcagg ccacggccgg cacgtacgag ggtggctact actggggttc
     7201 gatggctgac ggcacggtcg acctggcgcc catcgccagc gacgtggacg catccgtggt
     7261 cgccgcggtg gcggaacgga agcagcagat cattgacggt tcgttccatc cgttccaggg
     7321 tccgatcaac gcccaggacg gcagcgtgct cgtggcggct ggcgagacga tgagtgacgg
     7381 cgacatgctg ggaatcggcg tcttcgtcga aggggtcgtc ggctccgccg gctgattctc
     7441 accctgacgt ccatccccta ccaaggggga ccagacgaac gcggcgccgg cggggatgac
     7501 ccgccggcgc cgtcacgtcc gacttgagat cgcccggcag ggcctttcgt cgagaccatt
     7561 tatcgagact ggaaccgcag gaccaccgat gaccgaaccc ccgcacccga ccggcctcgc
     7621 caacacctcg gagaagccag atggggtcgc gcccgctgat ggcccacccg ccgttgagct
     7681 acgggacatc tggaagcgat ttcccggcgt ggtggccaat gccggtgccc acctgcgggt
     7741 ccgtcggggc agcgtgcacg ctgttctcgg cgagaatggt gccgggaagt cgaccctgat
     7801 gaacgtcctg tcaggcgtct accggcctga cgagggcgac gtccgcatcg acggcatggc
     7861 ccaccacttc cgcacaccgg ccgacgcgtt ggctgccggg gtggggatgg tccaccagga
     7921 gttccggctc gtgccgtcgt tcacggtggc cgagaatgtc gtgctggggg cctgcgagcg
     7981 aatcgtgcga cgctcggccg tcgagttggc ggtcggggca ctagccgaac gctttggtct
     8041 ggctaccgaa cccaaccggc cggtctggca actctccatg ggcgagcgcc aacgggtcga
     8101 gattctcaag gcgttgtggc gcgacgccag aatcctgatt ctggacgagc cgacggccgt
     8161 cctcaccccg ggcgaggccg atgaactggg cgccgtgttg cgccacatgg ccgacgacgg
     8221 ccgcaccgta gtgttcatca gccacaagct ccacgaggtg atgggcttct gcgacgaggc
     8281 caccgtgctc cggggcggga agacggtggc cgcctcgcta tcagtggccg ataccgacgc
     8341 ctccgaactg gctggactca tggtcggagc gtccccggtc attaccgaac ggccccctct
     8401 ccgcgaggcc ggcgaagtcc gtctcgaggt gcgtgatctc cggtgtctcg acgatcgtgg
     8461 gctgaacggc ctcgagggca tggacctcgc cgtacgttcg ggggagattg tgggtatcgc
     8521 cggggtagcc ggcaatggcc aacgcgagtt gacccagtgc atcgccggtc tgcggcccgt
     8581 cgagtcgggg acgatccacc tgatcggtga agaccgaacg gacgccaccc cgcgccagcg
     8641 gttcgcagac gggttgggct acatccccga ggaccgcctc ggtgtgggcc tggcgccccg
     8701 actcagcgtg acggacaacg cggtgctacg gacctacggc cgtcaccgcc gtggtccgtt
     8761 cctggatttc gcggcggcgg ccagccactg cagggacctc gtcgatcagt tcggcgtgcg
     8821 taccggcccg ctggacgagc cgatcgccgg gctgtcaggc ggcaacctcc aacgtctgct
     8881 ggttgggcga gagttggtcg acggccctcg ggtcgtggtg gccgcccaac ccacccgggg
     8941 actcgacgtt caaggggtga aggccatcca ggacctgctg gtgggcgagc gcgacgccgg
     9001 cgcggcggtc ctgctcatct ccgaggacct cgacgagttg ttgacgctgg ccgatcgcct
     9061 gctcgtgatc cacgccggtc ggatcgtggc cgagttcgat ccgacgaccg ctgaacgcca
     9121 cgccatcggc gaggcgatgg tcggtcatgc cgtaccggcc gatgatcagg tggccaaccg
     9181 atgaatcggc caatgggaag acgggcgggg aggccggtgc tggttcgccg tgaacaggtg
     9241 ctgcggggcg gccaaccact ggccttcggt attggcttgg ctgtggccct cgtggtgggc
     9301 attgtcctgc tggtcggctc gggccacgat ccgatgcgcg tctatgagcg gatgtttgag
     9361 gcttccctgg gtgacccccg ggcctggtcg gtgaccctca accgggcggt gccgctgggc
     9421 ctcgccggtt tggcggtggc cgtggctggg tccatgggcc tgtggaacat cggcgccgaa
     9481 ggccagatca tggctggcgc cgtcggtgcg gcctgggtgg ctcggattgg cggggagtgg
     9541 ccgtcacccc tcctcatcgc ggccatgctc gccgccgcca tcctcggtgg cggcctgctg
     9601 gccctcggtc cggccattgc ccgggcccgg attggcgtca acgagatcat caccaccctc
     9661 atgctcaacg aggtggccat ccgtctcgtc cagtggctgg tccacggtcg gtggaaggac
     9721 cccgattccc acaactttcc cctggccccg atgctgcccg acaacgcccg gctgcccggc
     9781 ctgttcgaac gggcccacgt cggggtggtg ctggctgcca tcgtgatcct tctgtttggt
     9841 gtggcgtcca gccgcacagc gtggggctac gagttacgag tcgccggatc ctcgggggct
     9901 acggcccgct atgccgggat ctcgctggaa cgcaagattc tgacggttct cgtcctttcc
     9961 ggtggtgtag ccggattcgc tggaggcatc gagctaagtg gcacctctga tcggatcacc
    10021 gaaagcctgt ccaacggctt cgggttcgcc ggcatcatcg tggccgcgct ggcactgatg
    10081 agaccgtcgg gcgtcgcagc ggtggccgtg ttgttcgggg ccgtgcagat cggcggacaa
    10141 agcatccaga ccatgggcgt ctcgtcatcg gtgtcgacga tccttcaggc cttgatcttg
    10201 ttcggcgcta tcgctgccgg ggtgttgagc cgataccggg tcgagatggt ggccggcgac
    10261 acgacggagg tgacgtcgtg aacgaggcct cgctgatcgg gttgttcgag gccacggtgt
    10321 cattcggtgc tctgctctac ctagccgccc tgggcgagat gattgccgag aaggcgggga
    10381 tcctgaacct cggagtggaa gggatgatgg ccatgggcgc ggtcacgggc ttcgtcgtcg
    10441 ccctccagac cggcaacccg tgggtggccc tggtggcagc ggtggccgcc ggagcgatga
    10501 tcggcctgct ccacgggttt ttcaccgtgg tgctgggtgc cgaacaggtg gtctccgggc
    10561 tctcgctaac catcctcggc ctcggcctgg ctgcctttgt ggggcgtggt tcggtcggcg
    10621 aaccggcggg ggccgagatg gtttccgtgg actggggccc gttgtcggat atcccgtggg
    10681 ctgggccgat cctgttcgcc cagtcgccgt tcgtctacct ggcggtcatc acgggcttcg
    10741 tgacctggtt cgttctgtgg cgcacccgcc tcggcctggc catccgagcc gccggcgagt
    10801 cggcatccac cgcggatgcc gctggccatt cggtggttgg tatccgcctg gcggcggtcg
    10861 ccacgggcgg tggactagcc ggagcgtcgg gcgcctacct gacgctctcg cttacccccc
    10921 agtgggctga cggcatcgtg gccggacggg gctggatcgc cgtcgcgctg gtcatctttg
    10981 gagcgtggcg tccgggccga gttgcggtcg gggcgctcct gttcgggctg acgctggcgc
    11041 ttaagacccg gttgcagacc ttcggcgtgg acttttcgcc gatccttctg tcgatgcttc
    11101 cctacctgct gaccatcagc gtcctggtgg ccatctcgat ccggtcgcga aatcggccct
    11161 ctcccgcacc ggcggcacta ggcatcgcct accgccgcga ggagcgctga agccctcccc
    11221 ccccgacttc tggggcgccg tcaggagcgg ggccctgtca gggcccgttc gaccccggtg
    11281 agcaggatca cgacctcctc gtcggcctcg atgcagccgt cgcgtcgtgc ggcaagcagc
    11341 ccggcgagac ccgctgtgcc ggtgggatcg gcaggcaccg aggtgtgggt tctgaccagt
    11401 cggtgggcct cgaccacgtc ggtctcgagg gctacgacgg gaccgccggg caccggcccg
    11461 agcaacatgt cgtgcaccac gggccgccag tcgtaggcga cgtcatcgag gattccggtg
    11521 gcggccgaac ctggatcgtc ccatggccac atatggggtc catcatgctc agccaaggcg
    11581 gccacggggt cgtcggcgtc ggcgacccgg ttaaaggctc gagccagcgg cgcacagcct
    11641 tcggtctgga cggcgaccaa cggcggccgg ccgcccggga ggacgtcgga cccaccgaga
    11701 tccacggcat cggtcagggc ctggacgatg ctgctagcca aggcggcgcc acctacctgg
    11761 acgaggagtc gggtggggga gcggtcgtgg gccgtgaggc cggtaaccaa ctcgaatccc
    11821 aaggtgcgac caccatcgat ggtccacggg gcctcgatgc cctggcaggt gaacggcacg
    11881 gcaccggtgg ccaccaactc ccggaaccgc aggatgcacg gatcgccggc ctcgccgtcg
    11941 cgacgctggc agacccggac gtcggccccg aggtcgtcga ggcgatccag aaccgtgatg
    12001 tcggcccacg tcggtacgtg gacggccagc gggcgaccgg cggcccgggc cacgatggcg
    12061 gcggccagcg cagcattccc gcacgaggag atggccaggg ttgtatcggt gggaacctcg
    12121 tcgacaagta ggtggagggc cagtccgaac aggtggcggg ccttgtggct gcctgacacg
    12181 ttgcccgtct cgtccttggc ccagatgccg cccgtctggc cgatggcatc ggccagcgcg
    12241 atctgtcgaa ccagcggggt ggtccggaag ccgtggccgt cgacggcggc caccgcgtcg
    12301 tcgaagcgac ggacggtgtc cacgtatcgg gtatcggacc agcccgcggc gatggcccgg
    12361 tggtgtgacc agagcagtgt ccggaacgcg acgaacgggt tggtgtcgtc ggtcagacgg
    12421 ccagtcggga gggcgcccaa ctcgggccag gtggcgctgg gaggtgcccc gagccagcca
    12481 ggaggccggc cgacagggac gggactcaag ggatcgtccc cgatcagtcg gccagcaccc
    12541 cggtgcggcc gttgaactcg tcgatcatgg tgtcccacga tggagcgaag gtttggatgt
    12601 gtcgccagaa gtcctggttg cgtcgcacct cgaagtcggc gaagtcgacg ccgtgctgtt
    12661 cgacccacgt gtaataggcg aggttgaaga tccggttgcg acccgtctcg gtcaggacct
    12721 cgacgtggtc ggtgtcggcc ccgaggaggt gagtgtcgat ggccgtcccg gcttctgcgc
    12781 cgctgaatcc ggcggcgtat cggccggcca tcatcgactc gcgctcgctg ccgtacattt
    12841 cgccgccgtc ggtggccacg gtgaccaggg cgtcgtcggg gcccaggtcc aactcacggg
    12901 acaccttgat ggacgctatg acgttgcaga ggctggacag gccgaagtgg cccagagtgt
    12961 tgagcaccgc gtcgtccacg ccggcggccg acaggtgggc acgcccctcg gggctggcga
    13021 aggccacccc caactcgtcg cacgcccggt ccgagacacc cacgaccacg tcggtgttgg
    13081 tgacgttgtg gatgaacggg atgtgcttgt cgccgatgcc ctgaatgttg tgctctccat
    13141 agccgttgta gagcatggtc gggcattcga cggcttcgac cgccgcgata cgggcaccgt
    13201 ggtcggcctt gagtctctcg ccggcggcca gagtgcccga cgaacccgag gcggccacgt
    13261 agccggccag tcggagcccg gggtgctggg cggcgtgatg gaggtagagg tgctcgaggg
    13321 cccggccggt cacctcgtga tggccgacgt ggttggcgaa ctcggtgaac tggttgagga
    13381 tgaagttgcc gggatctttc gccagctcgt cgcaggcgtc gtagatctcc ttgacgttgc
    13441 tctctgagcc ggtggttcgg atcacgtcgc ccggatcggc aatccactcc tccagccact
    13501 caaatcgttc acgactcatg ttctcgggca gcacggccac gccgcgacag cccatgagac
    13561 gagagatggc cacgccgccc cgggcgtagt tgcccgtgga cggccagatg gctcggtgga
    13621 gagtcgggtc gtactcgccg gtgacgatcc ggggcaccag acaggcgtag gccgccagca
    13681 ccttgtgagc gccgatcatc gggaagcggt tgccgaaggc cacgatgatg ggcgacggga
    13741 cgccggtcat ctcgggcgtc aggacgacgt gttcggggac gtcgaccagg ccgccgtaca
    13801 ggtcgttgta ccaatggacc cggtagaggt tgcgggcatc ggccgcattg cgatccacgc
    13861 cggccaagga ggctcggatg gcgtcgggga tggtcgacgg atcccccatc tgggcaaacg
    13921 tgggaagcgc gatgccctgg gtgcggaagc gttcgacgct ccgctggtag ccgacctcgt
    13981 cgacaatgcc ggtggccagg ccgaaccggg ccggatcgaa ggtagcgggg tcgaactcga
    14041 cggcgtcaaa cgagccgata cctacgctcg agttgtcact ggagatggcg ttggaagaac
    14101 tgctcatgga cgcaggttag ccattctggg tcagtgagat tgacaaaatg tcaacatcga
    14161 ggctggccgg gagtgacgga tgtcgcgtca cggattggtc ggggtgccac ggttcggagg
    14221 cgacgcgatg cgaggctggg ggggtgactc gtcgagtgct tgatctggtg ctcgcgctcg
    14281 ccctcgtggg ggcgggcgtg gtggtcgccg cgcgcgttgc cgagccctcg atgcgaccgg
    14341 tgctctaccc gccgtccgca tcgccgtcgc ctgcgctgcc gaccccgacg attccggcga
    14401 ccaccgttgt gcccaccact accgccgcac cggggaccac caccgtttcg ccggttgctg
    14461 cagcgactac cacggttccg cccgcgacga cgaccacgac caccgcggcg ccggtggacg
    14521 aggaggcggt gcttaccgcc tcctatgtct ggggtcgcag cacggaagcc gtgctgctcc
    14581 agacagtgtt gggcgtcgag gccgacggct ggtacggacc ggggacgcgg gaggcccacc
    14641 tggccgagaa tgcggtccgg ggcttgtccg tcgatgccgt cccggcgcca cccaccacca
    14701 c
//
LOCUS       DASCMR010000296         1808 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001433145, whole genome shotgun sequence.
ACCESSION   DASCMR010000296 DASCMR010000000
VERSION     DASCMR010000296.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1808)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1808)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1808
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001433145"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>1808)
                     /locus_tag="QGG16_07055"
     CDS             complement(<1..>1808)
                     /locus_tag="QGG16_07055"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: protein motif:HMM:NF012361.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA];
                     GO_function: GO:0004823 - leucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA];
                     GO_process: GO:0006429 - leucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HJP25067.1"
                     /translation="YSQELLDDLDDLEWPNKVKVMQRHWIGRSEGAEFGLPVADDDGV
                     ARTDVEPLAVYTTRPDTSFGMTFAVISPEHPRVDELTTDDRRAAVDAFRASVAGRSDI
                     ERQSTEGALDKRGVATGGRVVNPFTGQAIPVFLADYVLMTYGTGAIMAVPGQDQRDWD
                     FATAHGCEIVRTVRPPDDFDGEAYVGEGPAINSEFLDGMGVAEAKATAISWLEDHGYG
                     SGKVNYRLRDWLLSRQRFWGCPIPIVYCDTCGEQPLPVDQLPVEAPDDVEFVPTGQSP
                     LTYHEGFLSATCPSCDGPARRETDTMDTFVDSSWYFLRFTDPTNDEAPFSVEAAERWL
                     PVDQYIGGVEHAILHLMYARFFTKALSDLGVAPKGLREPFKRLFTQGMIRLGGSKMSK
                     SKGNLVSPEAILDDQGADALRLAHLQVKPPQEDVDWEDFGIDGCAKFLQRVWRLAVPD
                     SDLTNGARDGDPTEADLVIDRATHRLVARITNEYDRWSYNTAVAGFMEFTNTLYRYVQ
                     TDEEIHTDTLAAAIDTLLLVMAPAAPHLCAELWDQRNGGHVHVEAWPEADPEKLVDDT
                     VTMIVQVNGKVRERVDVPSDIDEDTAVAAALACEKV"
BASE COUNT          315 a          560 c          611 g          322 t
ORIGIN      
        1 caccttttcg caggccaggg cggcggccac tgcggtgtcc tcgtcgatgt cggacggtac
       61 gtcgacacgt tctcggacct tgccgttgac ctgcacgatc atcgtgacgg tgtcgtctac
      121 cagtttttcc gggtcagcct cgggccacgc ctcgacgtgc acgtggccac cgtttcgctg
      181 atcccagagt tcggcacaga gatgtggtgc agcgggtgcc atcaccaaca gcagggtgtc
      241 gatcgctgca gccaatgtgt cggtgtggat ctcctcgtcg gtctggacgt agcggtagag
      301 cgtgttggtg aactccatga acccggcgac agccgtgttg tacgaccacc ggtcgtactc
      361 gttggtgatc cgggccacca gacggtgcgt ggcccgatcg atcacgagat cggcctcggt
      421 tggatcgccg tcacgagcac cattggtcag gtcagaatcc ggcacggcga gacgccacac
      481 gcgttgcagg aacttggcgc acccgtcgat gccgaagtcc tcccagtcga cgtcttcttg
      541 tgggggcttg acctgcaggt gtgccaaccg cagcgcatct gcgccctggt cgtcgaggat
      601 ggcctcgggg gaaacgaggt tgcccttgga cttggacatc ttggagccgc cgaggcggat
      661 catcccctgg gtgaagagcc gcttgaacgg ttctcggagc cccttgggtg ccacccccag
      721 gtcggacaga gccttggtga agaagcgggc gtacatcaag tggagaatgg cgtgctcgac
      781 gccgccgatg tactggtcca cgggcaacca ccgctcggcg gcctccactg agaacggcgc
      841 ctcgtcgttg gtcgggtcgg tgaagcgcaa gaagtaccag gaggaatcca cgaacgtgtc
      901 catcgtgtcg gtctctcgac gggccggacc gtcacaagac ggacaggtgg ccgacaggaa
      961 tccctcgtga tacgtcagcg gcgactgacc agttggcacg aactccacgt cgtccggcgc
     1021 ctcgaccgga agttggtcca cgggcagggg ctgctcgcca caggtgtcgc agtagacgat
     1081 cggaataggg cagccccaga aacgctggcg ggacagcaac cagtcgcgga gtcggtagtt
     1141 gaccttcccg gagccgtaac catggtcctc cagccaggag atggccgtgg ctttggcctc
     1201 ggcgacgccc ataccgtcca agaactccga gttgatggca gggccctcac ccacgtaggc
     1261 ctcgccgtcg aagtcgtcag gggggcgaac ggtgcgcacg atctcgcaac cgtgggcggt
     1321 ggcgaagtcc caatcgcgct ggtcctgacc ggggacggcc atgatcgccc cggtgccgta
     1381 ggtcatcaac acgtagtcag cgaggaagac cgggatggcc tggcccgtga acgggttgac
     1441 cacccggcca ccggtcgcca cgccccgctt gtcgagtgca ccctcggtgg actggcgttc
     1501 gatgtcgcta cgaccggcca ccgatgcccg gaaagcgtcg acggcggccc ggcggtcatc
     1561 ggtggtgagc tcgtcgaccc gcggatgttc tggggagatc acggcgaacg tcatgccgaa
     1621 cgaggtatcg gggcgggtgg tgtagaccgc gaggggttcc acatcggtgc gggctacccc
     1681 atcgtcgtca gcaacgggta ggccaaactc ggcgccctca gaccgaccga tccagtggcg
     1741 ctgcatgacc ttgaccttgt tgggccattc caggtcgtcg aggtcgtcga gcagttcctg
     1801 ggagtagg
//
LOCUS       DASCMR010000297         1900 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001433893, whole genome shotgun sequence.
ACCESSION   DASCMR010000297 DASCMR010000000
VERSION     DASCMR010000297.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1900)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1900)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1900
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001433893"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..767)
                     /locus_tag="QGG16_07060"
     CDS             complement(<1..767)
                     /locus_tag="QGG16_07060"
                     /inference="COORDINATES: protein motif:HMM:NF019850.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase domain-containing protein"
                     /protein_id="HJP25068.1"
                     /translation="MSGDGLLDLASIVHVHVIGIGGAGMSAIAEVLATMGHRVSGSDL
                     KATTGLDRLRAQGIEVHIGHDAAHVGEADVVTRSTAVPDDNPECREAVHRGVPLLSRA
                     EVLGAIPRLRMTVAVAGTHGKTTTSSMLALALRGAGLRPSFVIGGDVNEIGTGAAWDS
                     RDLFVVEADESDGSFLRLEPELAVVTNLEPDHIEHHGGFEALRSSFDEFVRGVDGPVV
                     IGIDDSEGAALAERSRRNGLDVCTVGTSDDADWMITEL"
     gene            complement(764..>1900)
                     /locus_tag="QGG16_07065"
     CDS             complement(764..>1900)
                     /locus_tag="QGG16_07065"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: protein motif:HMM:NF016027.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0050511 -
                     undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase activity [Evidence
                     IEA];
                     GO_function: GO:0051991 -
                     UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-
                     glutamyl-meso-2,
                     6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol
                     4-beta-N-acetylglucosaminlytransferase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0030259 - lipid glycosylation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--N-acetylmuramyl-
                     (pentapeptide) pyrophosphoryl-undecaprenol
                     N-acetylglucosamine transferase"
                     /protein_id="HJP25069.1"
                     /translation="AGGGTAGHVLPGLAIAEALVDRGVVADRSGVHLVGSRRGIEVDL
                     VPPTGFGLTVLPGRGIQRTLTPANLLAVSGLALAFLQALVLLVRSRPAVVLSLGGYAS
                     VPCSLAAIILRVPLLVAEQNAVPGAANRLAGRFARACAVSFPGTDLPRSTVTGNPVRG
                     AVKTVAYGRRSPGEGASDRRSARKALGVDGRPFVLVFGGSLGARRINRAAAGAVEDWT
                     GGPVVIEHVVGARGWNDPRERAGSPGPEVEYRPVEYEADMPTVLSAVDLVVCRAGATS
                     VAELSAIGVPSILIPLPGAPGDHQTANAEHLERCGGARLVPDGELDGDRLKAELSVLL
                     ASPTSLEAMADGARSVGVPDAADRVVEMVADLLDGRLVSGDSSS"
BASE COUNT          372 a          707 c          546 g          275 t
ORIGIN      
        1 agttcggtga tcatccagtc ggcatcgtcc gacgttccca ccgtgcaaac atcgagacca
       61 ttccgtcggg agcgttcggc caatgccgct ccctcggaat catcgatgcc gatcaccacc
      121 ggaccgtcca cacccctgac gaactcatcg aatgacgatc gcagcgcctc gaacccgcca
      181 tgatgctcaa tgtgatccgg ttccaggttg gtcaccacag ccaactctgg ttccagtcgg
      241 agaaaagagc cgtcgctctc gtccgcctcc accacgaaca ggtcccgact gtcccacgcc
      301 gccccagttc caatctcgtt cacgtcgccg ccgatgacga acgacggtcg gagtcccgcc
      361 ccacggaggg ccagagccag catcgatgac gtagtggtct tgccgtgggt acccgccacc
      421 gccaccgtca tacggagacg ggggatggcg cctagaacct cggcccgact cagtaacgga
      481 actccccgat ggacggcctc ccgacattcc ggattgtcgt caggcaccgc tgtcgaccgg
      541 gttacgacgt cggcctcccc gacatgggcc gcgtcgtgtc cgatatgaac ctcgatgccc
      601 tgtgcccgga gacgatccaa accggtggtg gccttcagat ctgatcccga aacccggtgt
      661 cccatggtgg cgagcacctc ggcaatcgca ctcatgccgg caccgccgat gccgatcacg
      721 tggacatgca cgatcgacgc aagatccagg agaccatcac cgctcatgat gacgagtccc
      781 ccgagacgag tcgaccatcc aatagatccg cgaccatctc tacgacacga tcggcagcat
      841 cgggaacccc gaccgatcga gcgccgtccg ccatggcctc caatgaggtc ggactggcca
      901 gcagcacaga cagttccgct ttcaaccggt ctccatccaa ctctccgtca ggcaccagtc
      961 gcgccccgcc acaccgctcg aggtgttcgg cgttagccgt ctggtggtca ccgggagcgc
     1021 cgggcagcgg tatcagaatc gacggcacgc caatggctga caactcggcg acgcttgtcg
     1081 ccccggcccg gcacaccacc aggtccacgg cgctcaacac ggtcggcatg tcggcctcgt
     1141 attccaccgg gcgatactcg acctccggtc ctggcgaacc ggcccgttcc cgagggtcgt
     1201 tccagcctcg ggcgcccacc acgtgctcga taaccaccgg accacccgtc cagtcttcca
     1261 ccgcacccgc cgccgcacgg ttgatgcgcc gtgcgccaag agatccacca aagaccaaca
     1321 cgaacggccg gccgtcgaca cccagggcct tgcgagcgga ccggcgatcg gacgcccctt
     1381 cgccgggact ccgtcgaccg tacgccactg tcttgacggc accacggaca gggttcccgg
     1441 tcaccgttga gcggggaagg tccgtgcccg gaaacgaaac cgcgcaggcc cgggcgaagc
     1501 ggccggccag tcggttagcc gcacccggca cggcgttctg ttcggccacc agcagcggaa
     1561 cacgcaggat gatggcagca agggaacacg gcacgctggc gtaaccacca agggacaaca
     1621 ccacggccgg tcggctacgg accaatagca ccaatgcctg caggaaggcc agtgccaggc
     1681 cggagaccgc taacaggttg gccggcgtca gcgtccgttg gatgccccgc cccggaagaa
     1741 cggtcaggcc gaagcctgtc ggaggcacca ggtcgacctc gataccccgt cgactaccga
     1801 ccaggtgcac ccccgagcgg tccgccacga cgccccggtc caccagcgcc tcggcaatgg
     1861 ccagccctgg taacacatgc ccggccgtac cacccccggc
//
LOCUS       DASCMR010000298         2450 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001436501, whole genome shotgun sequence.
ACCESSION   DASCMR010000298 DASCMR010000000
VERSION     DASCMR010000298.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2450)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2450)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2450
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001436501"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..801
                     /locus_tag="QGG16_07070"
     CDS             <1..801
                     /locus_tag="QGG16_07070"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJP25070.1"
                     /translation="RDSAVDGWTIACMVGLFSSPVAWSLAVRNIGRDFGHELVRWRRP
                     LLVTGLLGAVGTTSFLTAVTLTATSNVVAIIASGPIFAAVLARIALHERTSMRTWRAI
                     GLTLIGIVVIVGGSMASGGIAGDLIALLAIMVFAVNLVLWRKYPNLPRTLVVAVTATC
                     TFLLTAVPADTNLLDRRALLATLAMGGLFGPIARLCMSTATRHAPPAEVSLFTPVETV
                     AASLWVWLWFDEVPATPTFIGGVIVVASVFYGLTGPAREVDPEPPRQA"
     gene            798..1322
                     /locus_tag="QGG16_07075"
     CDS             798..1322
                     /locus_tag="QGG16_07075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0002161 - aminoacyl-tRNA editing activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaK/EbsC family protein"
                     /protein_id="HJP25071.1"
                     /translation="MTPPHNASDPVLNQLAALDIEHEVMACDPALADTADFCAAYNID
                     PADSANAILVAGKAREGEERPFALCLVLATHRLDVNGTVRRRLGSRKASFAGADETAT
                     LTGMQIGGVTPFGLPDGCTVPIWIDADVMARNRVVVGGGSRDRKLLLPPVGLLALPGA
                     EAVNDLARLVPPQP"
     gene            complement(1382..1708)
                     /locus_tag="QGG16_07080"
     CDS             complement(1382..1708)
                     /locus_tag="QGG16_07080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25072.1"
                     /translation="MSTDDLESEGLLPRGQATQVMRALDALDELEAAAIKLVRAELAA
                     GPAIDGLIADPLTEGTRLDSLCIVDIMAADLLAALGRGDTVRHLVDEAPPGSARDALA
                     RHLTRS"
     gene            1786..2037
                     /locus_tag="QGG16_07085"
     CDS             1786..2037
                     /locus_tag="QGG16_07085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MazG nucleotide pyrophosphohydrolase
                     domain-containing protein"
                     /protein_id="HJP25073.1"
                     /translation="MELAEVQTLVEDLYGEVDRARGIPASVAWLCEELGELAQATRKG
                     TTEQQLHELGDVMAWLASLANQLGLSLDEAMARYVTDPP"
     gene            complement(2068..>2450)
                     /locus_tag="QGG16_07090"
     CDS             complement(2068..>2450)
                     /locus_tag="QGG16_07090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Asd/ArgC dimerization domain-containing protein"
                     /protein_id="HJP25074.1"
                     /translation="RGETDEEQKLRNESRKILGIPDLAVSGTCVRVPVFTGHSLTVHA
                     EFDRPISPERATELLTGAPGVVLSAVPTPLDAAGVDPTIVGRIRADETRTNGLALFLS
                     SDNLRKGAALNTIQIAEELHRRRA"
BASE COUNT          375 a          839 c          796 g          440 t
ORIGIN      
        1 cgcgactctg cggtcgacgg ctggactatc gcctgcatgg tcggcctctt ctcctcgccg
       61 gtggcctgga gtctggccgt ccggaacatc ggtcgcgatt ttggacatga gctggtccgg
      121 tggcgacgcc cactcctggt gaccgggctg ctgggcgcgg tcggcaccac gtcattcctg
      181 accgcggtga ccctgactgc cacatccaac gtggtggcca ttatcgcctc ggggcccatt
      241 ttcgctgccg tcctggcccg gatagccctc catgagcgca cctcgatgcg aacctggcgg
      301 gcaattggcc tgaccctgat cggcatcgtg gtgatcgtcg gagggtcgat ggcaagcggg
      361 ggcatcgccg gcgacctgat agccctgcta gccatcatgg tcttcgccgt caacctcgtg
      421 ctctggcgta agtatcccaa cctgccccgt accctggtgg tcgccgtcac cgccacctgt
      481 accttcctgc tcaccgccgt cccggctgat acgaaccttc tggaccgtcg ggctctgcta
      541 gccacgctgg ccatgggcgg gctcttcgga ccgatcgccc ggctgtgcat gtcgacggcc
      601 acccgccacg ctccacccgc cgaggtcagc ctcttcacac ccgtggagac ggtcgccgct
      661 tcgctgtggg tttggctgtg gttcgacgaa gtaccggcta ccccgacgtt catcggcggc
      721 gtcatcgtgg tggcatctgt gttctacgga ctgaccggtc cggcccgcga ggtcgaccct
      781 gaacccccga ggcaagcatg accccacccc acaacgcgtc agatccggtg ctcaaccagt
      841 tggcagcact ggatatcgaa cacgaggtga tggcgtgcga tcccgccctg gccgacacgg
      901 ccgacttctg tgccgcctac aacatcgacc ccgcagattc agccaacgcc atcctggtgg
      961 ccggcaaggc ccgcgaaggc gaggaaaggc ccttcgccct ctgcctggtg ctggccacac
     1021 accgcctcga cgtcaacggc accgtccgcc ggcggctggg ctcccgtaag gcctcgttcg
     1081 ccggagccga cgagacggcg accctgactg gcatgcagat cggtggcgtc acgccgttcg
     1141 ggctgcccga cggctgcacc gttcctatct ggatcgatgc cgatgtgatg gcccggaacc
     1201 gggtagtggt cggtggcggc tcgcgcgacc gcaagctgct gcttcctccg gtcgggctgc
     1261 tggcccttcc gggagccgag gcggtcaacg acctggcacg cctcgtccct ccgcagccct
     1321 agcccgaggt ctgatcaccg gtagtccgga ttagcccgac cgaccgggtc ggaacgcagt
     1381 cttaggaacg cgtcaggtgt cgggccagtg cgtcacgggc gctgcccgga ggcgcctcgt
     1441 cgaccaggtg gcgcacggtg tcgccccgcc cgagtgctgc cagcaggtcg gcggccatga
     1501 tgtccacgat gcacagactg tccagccggg tgccttcggt gagcgggtcc gcgatcagac
     1561 cgtcgatcgc cgggccggcc gccaactcgg cccgaaccaa cttgatcgcc gcggcctcta
     1621 actcgtcgag cgcgtcgagg gcccgcatga cctgggtcgc ctgacctctt gggaggaggc
     1681 cttcagattc caaatcatcg gtcgacaccc gttgagtgtg gatcgaacac acgcgcgatc
     1741 ggtggatgcc cgctgatctg cccggcgacc ggtaccgtcc gccttgtgga acttgccgaa
     1801 gtgcagacgc tggtggaaga tctttacggc gaggtcgacc gggctcgggg aatcccggcc
     1861 tccgtggcct ggctctgcga ggaactcggc gagctggctc aggccacccg taagggcacg
     1921 accgagcagc agctccacga gttgggcgac gtgatggctt ggttggccag cttggccaac
     1981 caattgggct tgtcgctgga cgaggcgatg gcccgctatg tgacggaccc tccatagacc
     2041 ggccccggca ataggccgga atcgggttca ggctcgtcgg cggtggagtt cctcggcgat
     2101 ttggatggtg ttcaacgccg cacccttgcg aaggttgtca ctggatagga agagtgccag
     2161 accattggtg cgggtttcgt cggcccggat gcgacccacg atggtgggat ccactccggc
     2221 cgcatccaac ggtgtgggca cggcggacaa gacgacgccc ggagccccag tcagcagctc
     2281 ggtggcccgc tccggtgaaa tggggcgatc gaactcagcg tgcacggtca acgagtgccc
     2341 ggtgaagacc ggcacccgca cgcatgtccc cgacaccgcg aggtccggga tgcccaggat
     2401 ctttcggctc tcattacgga gcttctgctc ctcgtcggtc tcacctcgtc
//
LOCUS       DASCMR010000299         1996 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001436997, whole genome shotgun sequence.
ACCESSION   DASCMR010000299 DASCMR010000000
VERSION     DASCMR010000299.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1996)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1996)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1996
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001436997"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            202..1401
                     /locus_tag="QGG16_07095"
     CDS             202..1401
                     /locus_tag="QGG16_07095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP25075.1"
                     /translation="MTEAEVREMARQLVADVPPDQVDQFEFRGAQFDRGLALVQFPEG
                     LGGLGLSSRRLQTVVDGELRAAGVTYHDLNINPIGIGMGAPVVLTYASDEQKQRLLRP
                     MYTGEEVWCQMFSEPGAGSDVAGLSSRAVRDGDEWIVNGQKVWTTLAHVSRWGMLVAR
                     TDPDQPKHKGLTYFLLDMESEGVEVRPLHQITGEAEFNEIFLTDVRIPHDRVFGEVGN
                     GWAAAVTTLMNERVALGGGVPKKGSGPIGDLVNLWGETRDSLDPVTRTVMRDRVTDLW
                     SQAEALRLTNWRARETSKSGNPGPEGSVTKMMSAEMNQRIYETCMDLLGADGMVYEAG
                     YERKRPTGLRGPGIHPRYAFLRSRANTIEGGTSEVMRNILGERILGLPGDVRVDKEIA
                     WADVPRN"
     gene            1546..>1996
                     /locus_tag="QGG16_07100"
     CDS             1546..>1996
                     /locus_tag="QGG16_07100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HJP25076.1"
                     /translation="MRDRYRVERDKRLRADGNDQYIEVVGEFAHYTDDPYVESPIDRP
                     PLTDEVDVIVVGGGFGGLQMGARLREAGVEDLRIIEKGGDFGGTWYWNRYPGAQCDIE
                     SYIYLPLLEEVGYIPQEKYSYAREILDYSRRLGEHYRLYDGVMFQTEV"
BASE COUNT          366 a          607 c          687 g          336 t
ORIGIN      
        1 ctcacgttcg gtggcgaccc ggtcgcctga tccgggctaa gtcagcctgg ccgtctgggc
       61 atctgcgtca gctagcggac gactgcttcg gcgcaagctg cgggtccccg gttcggggct
      121 gacagttgcc gctgggtagg ttcgcgcccg gctccgggac cgcccggaca accatgtgaa
      181 ccgggagcga tcatgactga ggtgaccgaa gcagaggtcc gggagatggc gaggcagttg
      241 gtggctgacg tgccgccgga ccaggttgac cagttcgagt tccggggcgc tcagttcgat
      301 cgcggcctcg ccctcgtgca gttccccgag gggctgggcg gtctgggtct gtccagccgg
      361 cggctccaga cggtggtcga cggtgagtta cgggctgccg gggtgaccta ccacgatctc
      421 aacatcaacc cgatcggcat cgggatgggc gcgccggtgg tgctcaccta cgcgtccgat
      481 gaacagaagc agcgccttct ccgtccgatg tacacgggtg aagaggtctg gtgccagatg
      541 ttcagtgagc cgggtgctgg ctcggatgtg gcggggctgt ccagtcgggc ggttcgtgac
      601 ggcgacgagt ggatcgtcaa cggccagaag gtgtggacga cgctggccca tgtatctcgg
      661 tgggggatgt tggttgcccg aaccgatccg gaccagccga agcacaaggg acttacgtac
      721 ttcctgttgg acatggagtc cgagggcgtt gaagttcgac ccctgcacca gatcaccggt
      781 gaagccgagt tcaacgagat cttcctgacc gacgtgcgga ttccccacga ccgggtgttc
      841 ggcgaggtcg gcaacggctg ggccgcggcg gtcaccacgt tgatgaatga acgggtggcc
      901 cttggtggtg gcgtgccgaa gaagggttcg ggccccattg gcgacctggt gaatctgtgg
      961 ggcgagacga gggactcgct ggacccggta acgcggaccg tgatgcgcga ccgggtcacc
     1021 gacttgtgga gtcaggccga ggcacttcgc ctaacgaact ggcgggcccg ggagacctct
     1081 aagtccggca accctggccc cgaggggtcg gtcaccaaga tgatgtcggc tgagatgaac
     1141 cagcggatct acgagacctg catggacctc ctgggtgccg acggaatggt ttacgaggcc
     1201 ggatacgaac gcaagcggcc taccggcctc cgggggccgg gcatccatcc caggtacgca
     1261 tttctccggt ctcgggccaa caccatcgag ggtggaacgt ccgaggtcat gcgaaacatc
     1321 ctgggcgaac ggatcttggg cctgcccggc gacgtgcggg tcgacaagga gatcgcctgg
     1381 gctgacgtgc cccgcaactg accagtcgag tattttgaaa gaccgttcac cgatgcgttt
     1441 gttgacagca ccgcagctcc gtggagaagg accccaacgc tgagtaccac cagccggcag
     1501 gctgaaactg ccagccccgc cgagggccgc ttcgatcccg acgctatgcg ggaccgctac
     1561 cgcgtcgagc gggacaaacg gctgcgcgcc gacggaaacg accagtacat agaggtcgtc
     1621 ggagagttcg cccactacac cgacgacccg tacgtcgaat ctcccatcga ccggccgccg
     1681 ctcaccgacg aggtcgacgt gatcgtcgtc ggaggcggct tcggtggcct ccagatggga
     1741 gcccgcctcc gcgaagccgg cgtggaagac ctgcggatca tcgaaaaagg cggcgatttc
     1801 ggcggcacct ggtactggaa ccggtacccg ggagcccagt gtgacatcga gtcctacatc
     1861 tacctgccgc tcctcgaaga agtcggctac atcccccagg agaaatactc gtacgcccgg
     1921 gagatcctcg actacagccg gcggctcggc gagcactacc ggctctacga cggggtgatg
     1981 ttccaaacgg aagtca
//
LOCUS       DASCMR010000300         3076 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001437167, whole genome shotgun sequence.
ACCESSION   DASCMR010000300 DASCMR010000000
VERSION     DASCMR010000300.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3076)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3076)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3076
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001437167"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1067)
                     /locus_tag="QGG16_07105"
     CDS             complement(<1..1067)
                     /locus_tag="QGG16_07105"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024118.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HJP25077.1"
                     /translation="MAAPVHLTFLGGLGEIGRNCAALEAHGRIVMLDCGQLFPDDMPG
                     VDAVLPDFGWLLERADRLEACVVTHAHEDHIGGLPYLLRALGERGATLPIYGSPFTLG
                     MVRGKLKFAGVPVPDLIPLGDYDRLPIGPFDCEFLPVTHSTPSGLMTVFHTPQGNILH
                     SSDFKLDPTPIDGRVTDLDRVREIAADGGIRLLLADSTNAGSAGSSTSESTVGPVLRR
                     VFDENEGRRIIIGAFSSHVHRIQQVADAAAATSRKLVVMGPSMVRNTTLARELGLLNI
                     SDKMLARDSDLDDLDPARTCIVCTGSQGESRAALNLMGQGRHRFVTVGDTDTVVFSSH
                     PIPGSEAAVARLHNSLARRGAR"
     gene            complement(1095..1982)
                     /gene="dapA"
                     /locus_tag="QGG16_07110"
     CDS             complement(1095..1982)
                     /gene="dapA"
                     /locus_tag="QGG16_07110"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HJP25078.1"
                     /translation="MEPRFGRVVTAMITPFDAHGELDLGGAVELARWLVEQGNDGLVL
                     AGTTGESPTLTHDEQIALVEAVSGAVDCHVIAGAGSNDTAAAVELTERCTEAGADAIL
                     TVTPYYNRPSQLGLLHHFTAVAGATDLPVMLYDIPPRSGRKIDNATILQLADDVVNVV
                     AVKDAAGDVAETARLAAAAPDGFEIYSGEDALTLALLAVGAVGVVSVASHWATPETVV
                     MMDAFFSGDVARATETNQRLVESWDFESGDLKPNPLPAKAMMKVLGLPGGDCRPPMGP
                     EPEGLQDLARQVLAGLGRT"
     gene            complement(2018..2677)
                     /locus_tag="QGG16_07115"
     CDS             complement(2018..2677)
                     /locus_tag="QGG16_07115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25079.1"
                     /translation="MSAVGSHTSSPDLMVVQALRVKGFVDAEAVVAATGLDADVVDAM
                     LAGLADAGHARHREGRMSGWMLTPEGRAYGESLLAAELEATGVRPAVEAAYRDFLELN
                     QGFLGLCTDWQLRPDPDAPDGDPIVNDHADAVHDAAVVARLGEADDVMREVCGGLAEV
                     LARFDGYGERFAEALARVRVGEAEWFTRPMIDSYHTVWFELHENLLATLGIERAREQV
                     G"
     gene            complement(2683..>3076)
                     /locus_tag="QGG16_07120"
     CDS             complement(2683..>3076)
                     /locus_tag="QGG16_07120"
                     /inference="COORDINATES: protein motif:HMM:NF014193.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SURF1 family cytochrome oxidase biogenesis
                     protein"
                     /protein_id="HJP25080.1"
                     /translation="RQVQVAGDPSVWAPDAGEVVLTGSLDLFRAGERGHGGEVDRIDR
                     EALATRWDTTLAPLWLRAAESTGVGTWPAPVPVVDVGDGSHRSYAVQWFVFSIIGILG
                     YPLVLLRLASHSGSRSNRSVPEWDAPVA"
BASE COUNT          540 a         1046 c         1031 g          459 t
ORIGIN      
        1 cgggctcccc ggcgggccag cgagttatgc agtcgggcca ccgctgcctc gctaccggga
       61 atggggtgcg acgagaacac cacagtgtcg gtgtcgccca ccgtcacgaa ccggtggcgc
      121 ccttgtccca tcaggttcaa tgcggcccgc gactcgccct gggagccggt acacacgatg
      181 caggtgcggg ccgggtccag gtcgtccaga tcgctgtccc gggccagcat cttgtcggag
      241 atgttcaaca accccagctc acgggccagc gtcgtgttac ggaccatcga cggccccatg
      301 acaaccagct tgcggctcgt agccgccgcg gcgtcggcca cctgctggat gcgatgcaca
      361 tggctcgaga acgctccgat gatgatacgg cggccctcgt tctcgtcgaa cacccgacgt
      421 agcaccggac caacggtcga ctccgacgtc gacgatccgg cagaaccggc attggtcgag
      481 tcggccaaaa gcaggcggat gccaccgtcg gcggcgatct cgcgaacccg atccagatcg
      541 gtgacccggc cgtcgatggg cgtcgggtcc aacttgaaat cactcgagtg gagaatgttc
      601 ccctggggcg tatggaacac cgtcatcagc ccgctgggcg tggagtgagt gacgggcagg
      661 aactcgcagt cgaagggacc gatgggcaga cggtcgtagt cgcccaacgg aattagatcg
      721 ggcacgggca cgccggcgaa cttcaacttg ccgcgtacca tcccgagagt gaacggcgaa
      781 ccgtagatgg gcagggtggc gccccgctcg ccgagggccc ggagcaggta cggcaatcca
      841 ccgatgtggt cctcgtgggc atgggtcacc acgcaggcct caagacggtc agcccgctcc
      901 agtagccagc cgaagtcggg cagcacggcg tcgacgccgg gcatgtcgtc gggaaagagt
      961 tggccgcagt cgagcatcac gatgcggccg tgggcctcga gggccgcgca gttgcggccg
     1021 atctcgccga ggccgccgag aaacgtcaga tgtacgggtg ctgccatggg gaagattctc
     1081 gggaggtagt tgaatcaggt ccgaccgagg ccggccaaga cctggcgggc gaggtcctgg
     1141 aggccctcgg gctcgggacc catgggggga cgacagtctc ctccgggcag gcccaggacc
     1201 ttcatcatgg ccttggccgg tagagggttg ggcttcaggt caccggactc gaagtcccac
     1261 gactcgacga gccgctggtt ggtttcggtc gcccgggcca cgtcgccgga gaagaaagca
     1321 tccatcatga ccaccgtctc gggtgtcgcc cagtgcgagg ccacgctgac cacgccaacg
     1381 gcgccgacgg ccagcagagc cagcgtcagt gcgtcctcac cgctgtagat ctcgaaaccg
     1441 tccggtgcag cggcggccaa ccgggccgtc tcggccacgt cgccggccgc gtccttcacg
     1501 gccaccacgt tgaccacgtc gtcagccaac tggaggatgg tggcgttgtc gatcttgcgt
     1561 cccgagcggg gtgggatgtc atagagcatc accggcaggt cggtggcccc ggcaacagcc
     1621 gtgaagtggt gcaacagccc caactgggac gggcggttgt agtacggggt gacggtgagt
     1681 atggcgtcag cgccggcctc ggtgcagcgc tccgtaagct ccacggcggc tgccgtgtcg
     1741 ttgctgcccg ccccagcgat cacgtggcag tccacggcgc ctgacacggc ctccacgaga
     1801 gcgatctgct cgtcgtgggt gagcgtcggc gactccccgg tagtgccggc cagcacaaga
     1861 ccgtcgttgc cttgttcgac cagccaacgg gccagctcga cggcaccgcc gaggtccagc
     1921 tcgccgtggg cgtcaaaagg cgtgatcatg gcggtgacga cccgcccgaa cctgggttcc
     1981 atcgtgtgtt cccttccggt cctgtacagc ccggcgctca gccgacctgc tcgcgggctc
     2041 gctcgatgcc gagcgtggcc agcaggttct cgtgcagttc gaaccagacc gtgtggtacg
     2101 agtcgatcat cggtcgggtg aaccactccg cctcgccaac ccgcacacgg gctagggctt
     2161 cggcgaaacg ctcgccgtac ccgtcgaagc gggccaatac ctctgccaga ccaccgcaca
     2221 cctcgcgcat gacgtcatcg gcctcaccca gtcgggccac cacggccgca tcgtggacgg
     2281 catccgcatg gtcgttcacg atgggatcgc catccggcgc gtcgggatca ggacgcaact
     2341 gccagtcggt gcataacccc aggaagccct ggttgagctc caggaagtcg cggtaggcgg
     2401 cctcgacggc cggacggact ccggtggcct ccaactcggc ggccagcagg gactcgccgt
     2461 aagcgcgccc ctcaggagtc agcatccagc ccgacatccg accctcacgg tgacgggcat
     2521 gaccggcgtc ggccagcccg gccagcatgg cgtcgactac gtcggcgtcc aggccggtgg
     2581 cggcgaccac cgcctccgcg tccacgaaac ccttcacccg gagagcttgt acgaccatca
     2641 ggtcagggga actggtgtgg gacccgactg cagacatggt ggtcacgcta ccggcgcgtc
     2701 ccattcggga acggatcggt tcgatcggct tcccgaatgg ctggcgagcc ggagcaggac
     2761 caacgggtac ccgaggatcc cgatgatcga gaagacgaac cactggacgg cataggagcg
     2821 atgggagccg tctcccacgt cgaccaccgg caccggggcc ggccaggtgc cgacaccagt
     2881 cgactcggcg gcccgtagcc acaagggggc caacgtggta tcccagcgcg tcgccagcgc
     2941 ctcccggtca atgcggtcca cctcgccgcc gtgaccccgc tcgccggccc ggaataggtc
     3001 caacgaaccg gtgaggacga cctctccggc atctggagcc cagacgctcg gatcgcccgc
     3061 cacctggacc tggcgc
//
LOCUS       DASCMR010000301         4174 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001442352, whole genome shotgun sequence.
ACCESSION   DASCMR010000301 DASCMR010000000
VERSION     DASCMR010000301.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4174)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4174)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4174
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001442352"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(47..514)
                     /locus_tag="QGG16_07125"
     CDS             complement(47..514)
                     /locus_tag="QGG16_07125"
                     /inference="COORDINATES: protein motif:HMM:NF013583.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="R3H domain-containing nucleic acid-binding
                     protein"
                     /protein_id="HJP25081.1"
                     /translation="MDLQTQARITEEFVQGLLDRMGLEARVASRIEEDRLTVEAQGLN
                     LGLAIGQRGETVRAITELSRTLVQRSSDGQADGSLTVDIGGYRERRRTFLADFARNQG
                     EAVLDDGRPRALEPMGAADRKVVHDTVGEIDGLATFSEGSDADRRVVISLIDG"
     gene            707..1102
                     /locus_tag="QGG16_07130"
     CDS             707..1102
                     /locus_tag="QGG16_07130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25082.1"
                     /translation="MPIATTLAPPAATIAATRTLALTLVITILPTITTLGGTPDPILI
                     PALGLAILSPAALARTATTPTAAAVISPIPITSLHLGTGAGRPNTSPETGLGLLQTKH
                     RPRGLDQHLHLEFIFSYTEPIQGSFLCFI"
     gene            complement(1136..2392)
                     /gene="yidC"
                     /locus_tag="QGG16_07135"
     CDS             complement(1136..2392)
                     /gene="yidC"
                     /locus_tag="QGG16_07135"
                     /inference="COORDINATES: protein motif:HMM:TIGR03592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0051205 - protein insertion into membrane
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HJP25083.1"
                     /translation="MFDLIAAVLSWFYGLVPSYGLAIVLLTLVVMLIVTPLTLKGTRS
                     MIKMQHLQPEMKKIQTRYKGDREVMNREMMAFYQANNINPMGGCLPMLIQAPVFMVLY
                     NVLRGMTRRLSDIGDSAGWVAGRLANGSNAALTGASNDPQAFYPAYVDPSSDLFIDLS
                     SETEMLFLGFDLSRSAGTALSQSLTSSLPYLILILIVFASSWIQQRQIRGRNPDATVN
                     PQQQMLMKVMPFFLPVISFNLDAALVMYFVVSNLYRIAQQAYITQTLYGPGRDHPEVV
                     VPTSTESTKKSGGGKSGSAKSGAKTGGKPGKSTGGKPEDRPSTSGSVRSGRTTAGKVE
                     NSSQKIDDGVSSEDDSRSSKKRARKSRSSTSPAKKKASRRGRSDASDDIKTTDKRPPA
                     GRSGGGRTTPPGTARARSAKNKKRRK"
     gene            complement(2380..2670)
                     /gene="yidD"
                     /locus_tag="QGG16_07140"
     CDS             complement(2380..2670)
                     /gene="yidD"
                     /locus_tag="QGG16_07140"
                     /inference="COORDINATES: protein motif:HMM:NF013932.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HJP25084.1"
                     /translation="MKTSSDFGVLTRILRSAVRGYQRVVDGRPTPCRFVPTCSNYALD
                     ALESHGAIRGSVLTVGRLCRCHPWGGTGLDPVPGPSDRPHPFHGSRGSTCST"
     gene            complement(2706..3050)
                     /locus_tag="QGG16_07145"
     CDS             complement(2706..3050)
                     /locus_tag="QGG16_07145"
                     /inference="COORDINATES: protein motif:HMM:NF013022.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HJP25085.1"
                     /translation="MIGRLRRRDDFRLLRRNGRTVRRGPLRIGFRASGDQMDGPGPRV
                     AYAIPRTVGPAVVRNRIRRRLRAIVVDLDRRPQGVPVGDYLVRVSPGAADSSYDELQR
                     YLTGAIDALTEG"
     gene            complement(3047..3181)
                     /gene="rpmH"
                     /locus_tag="QGG16_07150"
     CDS             complement(3047..3181)
                     /gene="rpmH"
                     /locus_tag="QGG16_07150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003397591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HJP25086.1"
                     /translation="MKRTFQPNTRRRARKHGFRKRMQTRAGRAIISARRQKGRARLSA
                     "
     gene            3789..>4174
                     /locus_tag="QGG16_07155"
     CDS             3789..>4174
                     /locus_tag="QGG16_07155"
                     /inference="COORDINATES: protein motif:HMM:NF023069.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA N-terminal domain-containing protein"
                     /protein_id="HJP25087.1"
                     /translation="MADATVLWEACAAAIQSKVSDVVWQMTFSAAQPVTADDQTLTVS
                     VPSIVTLDRIEGRYHDLVHDTVSEVSDDQLTLNIVIRKDDVENHDELIFDLPPLTHPA
                     ASTTAPNSLHRANLDERTNPIQPTAS"
BASE COUNT          833 a         1379 c         1170 g          792 t
ORIGIN      
        1 gcgactgcct cgtccaagac ctggtcgagg cttttctcga cgatggttag ccgtcgatca
       61 gcgagatcac cactcgccga tcagcgtcac tgccctcaga gaaggtggcg aggccatcga
      121 tctctcccac ggtgtcatgc acgaccttgc gatccgctgc tcccatgggc tccagcgccc
      181 ggggacgacc gtcatcaagc acagcctcgc cctggttccg agcgaagtcc gccaggaagg
      241 tccgacgacg ctcgcggtac ccgccgatgt cgacagtcag agacccatcc gcctgaccat
      301 cggaactcct ctgtacgagg gtccgtgaca gttcggtgat ggcacgtacc gtttcgcctc
      361 gctggccaat ggccagacca aggttcaggc cctgagcctc gacggtgagg cgatcctctt
      421 cgattcggct ggccacccga gcctcgaggc ccatccggtc caggagtccc tggacgaact
      481 cttcagtgat tcgtgcctgc gtctgcagat ccatggactc cacgtcagtc ctctcccggt
      541 cgcttccacg accgtttcca tcggtcgacg acttcgccga ctctccattc cgacctcgac
      601 gatcggcatt cctctcacta ccccggtccc gtccacgtcc agaatcgccc acaggctccc
      661 gtgacgcacg cttttccgaa gttactgact cctgctgcga gtggccttgc ccatcgccac
      721 gaccctcgcc ccccctgcgg cgacgattgc cgccacgaga accctcgccc tgacgctcgt
      781 catcacgatc ctgccgacga tcaccaccct gggtggtact ccggatccga tcctgatccc
      841 cgcccttgga ctggccattc tgtcgcccgc tgcccttgcc agaaccgcca cgaccccgac
      901 cgccgctgcg gtcatttcgc cgattccgat cacgtcgctc caccttggga cgggggctgg
      961 tcggccgaac acgagcccgg agacgggcct cggtcttctt caaaccaaac atcgaccgag
     1021 aggcctcgac cagcacctcc acctcgagtt catcttcagc tacaccgagc cgatccaagg
     1081 ctcgttcctt tgcttcatct agtgagatac cggtggtttc aatccactcc atggctcact
     1141 tcctcctttt cttgttcttg gcactgcgcg cacgggctgt tccgggagga gtcgtccgac
     1201 ccccaccaga ccgcccggcc ggcggcctct tgtcggttgt tttgatgtca tcagacgcat
     1261 cgctgcgtcc gcgacgactc gccttcttct tcgccgggga agtcgaggac ctggatttcc
     1321 gagcacgctt cttgcttgaa cgggaatcat cctcagagga cactccatcg tcgatctttt
     1381 gagaactatt ctcaaccttg ccggctgtcg ttcgtcctga tcgaacagaa ccgctggtcg
     1441 agggcctatc ttcaggcttt ccacctgtac ttttcccggg cttgccgccg gtcttggcac
     1501 cagatttggc actgccggac ttaccgccac cggacttctt ggtcgattca gtactggtcg
     1561 gaaccacaac ctctggatga tcccgcccag gtccgtacaa cgtctgggtg atgtaggcct
     1621 gctgggcgat ccggtacagg ttggagacca caaagtacat gaccaacgca gcatccaagt
     1681 tgaacgagat caccggcagg aagaacggca tgaccttcat cagcatctgc tgctgaggat
     1741 tcaccgtggc atcggggttc cgacccctga tctgtcgctg ctggatccat gagctggcga
     1801 acacgatcag gatcaggatc agatagggga gggacgacgt caagctctgt gacaacgccg
     1861 ttcccgctga tcgggagaga tcgaagccca ggaagagcat ttcggtctca ctagacaggt
     1921 cgataaagag atctgaactc gggtcgacgt aggccggata gaaggcctga ggatcgttgg
     1981 acgccccggt caatgccgca tttgacccgt tggccaaccg tccggccacc catcccgcgc
     2041 tgtccccgat gtcggacaac cgcctggtca tgccccgcag cacgttgtac aggaccatga
     2101 acactggcgc ctggatcaac atgggcaggc agccacccat cgggttgatg ttgttggcct
     2161 ggtagaaggc catcatctcc cggttcatga cctcccggtc gcccttatac cgagtctgga
     2221 tcttcttcat ctcgggctgg aggtgctgca tcttgatcat cgaccgcgtg cccttaaggg
     2281 tcagaggggt cacgatcagc atgaccacga gggtcagcag gacaatggcc aggccgtagc
     2341 tgggtacgag cccgtagaac caggacagaa cggcggcgat caggtcgaac atgtggatcc
     2401 tcgggaacca tgaaacggat ggggacggtc agatggcccg ggcacgggat ccaagcccgt
     2461 accaccccac ggatggcacc ggcagaggcg cccgacggtc aacacggaac cacgaatcgc
     2521 cccatggctc tcgagggcgt ccaaggcgta gttcgaacag gtcgggacaa atcgacaggg
     2581 agtgggacga ccatccacga cgcgctggta gccacgtacc gcagatcgca aaattcgggt
     2641 aagaacaccg aagtcagagg atgttttcat agataggttc cgtcaagtac gtacacgtcg
     2701 gagcgttagc cttcggttag tgcgtcgatc gcacccgtca gatatcgctg gagctcgtcg
     2761 taggacgagt ccgcagcacc aggtgacacc cgaaccaggt agtcgccgac cggtacaccc
     2821 tgtgggcgcc ggtcgaggtc caccactatc gccctgaggc gacggcggat ccggttccgg
     2881 acgaccgccg gcccgacggt ccgaggaatg gcgtaggcca ccctcggtcc cgggccgtcc
     2941 atctggtctc cgctggctcg aaagccgatt cgcaatggtc cacggcgaac cgtgcgacca
     3001 ttgcgacgga gtagacgaaa gtcgtcccgt cgacgcagcc ggccgatcaa gccgacaatc
     3061 gggcgcggcc cttctggcgg cgggccgaaa tgatggccct tcctgcgcgg gtttgcatcc
     3121 gcttccggaa gccgtgcttc ctggctcgac gcctggtgtt gggctggaac gtacgcttca
     3181 taaatggtct cctgctggca tcgaaagggc gtcgtcagga aggggagcgc ccagatgccg
     3241 tcgattactg gaatacggtc ggacccctca tcggacaaag acgccagacg aagaacgacc
     3301 gtccaccgtc ggtgacggca ggatcggctc ggctgccgat cggactggac cgatggatcg
     3361 ggacgaatcc cgcaccgatc atgtgtctgc ccgacaggct acgggccgat tgacggacgc
     3421 gccaaccgtg aacaccgcat ctaacgagat ccctgcctcc cgtttgagga cctctaaccc
     3481 cagcaccaac aacccccagc gagagttatc cacagatccc atcaagcccc gactgcctaa
     3541 ttggtccctg aaacccggag cggtgtcccc atcgcgaaat catccaattc cgggccctgt
     3601 cgcgcgaaat aggaactgaa caggcgcgac gcgtgatggg ttctggcctt gcgcgaggtc
     3661 atccacaggc tgctaccttg cctcgcccac agcgagggcg gagtgggcca acggtggctg
     3721 ttttccgttc tctaacgacc tttccacaac aaatttaaca tctgtggaca acttgatcgg
     3781 agaatgcaat ggcagatgca acggtgcttt gggaggcctg tgcggcagcc attcagtcga
     3841 aggtgtcaga cgtcgtctgg cagatgacgt tcagcgcggc ccagccggtg actgcagacg
     3901 accaaaccct caccgtctca gtaccgagca tcgtgaccct ggatcggatc gaaggtcggt
     3961 accacgacct ggtccatgac acggtctccg aggtgagcga cgaccaactc acgctcaaca
     4021 tcgtcatccg aaaggacgac gtcgaaaacc atgatgagtt gatcttcgac ctcccaccgc
     4081 tcactcatcc agcagccagt accacagcgc caaattccct ccatcgagcc aacctcgatg
     4141 agcgcaccaa ccccatccaa ccaacagcat ccag
//
LOCUS       DASCMR010000302         4120 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001445648, whole genome shotgun sequence.
ACCESSION   DASCMR010000302 DASCMR010000000
VERSION     DASCMR010000302.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4120)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4120)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4120
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001445648"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            193..699
                     /locus_tag="QGG16_07160"
     CDS             193..699
                     /locus_tag="QGG16_07160"
                     /inference="COORDINATES: protein motif:HMM:NF013231.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HJP25088.1"
                     /translation="MPPPDAPLPFDPISEARRNWEARGWGAVDAMAAATSITRAHQIL
                     LKRIDTTLESFDLMFSRFEALALLSFTRTGTMPMGRMGERLQVHPTSVTNTVDRLEAQ
                     GLVARIPHPTDRRTTLVEITPAGRTRVERAAAALGDVGFGLDGMKTSDLTAVTNSLHS
                     LRAAAGDF"
     gene            806..1003
                     /locus_tag="QGG16_07165"
     CDS             806..1003
                     /locus_tag="QGG16_07165"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25089.1"
                     /translation="MIVSTAIGLLALVIGLIIGWPVLVLLSIIFTIVQIVMLAAKTAV
                     ERNDVKVAERLAAKKARHERG"
     gene            1085..1867
                     /locus_tag="QGG16_07170"
     CDS             1085..1867
                     /locus_tag="QGG16_07170"
                     /inference="COORDINATES: protein motif:HMM:NF018066.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetoacetate decarboxylase family protein"
                     /protein_id="HJP25090.1"
                     /translation="MSDTTSTTPTARPADIAAHPKLNIVYRTDPDRIAPLLPPGIEPT
                     GSPNVYVGIYCVPIRNEPEYGVSTKVDAVWNGIEGQYSFGIGIDQEAAIFVSSETNGQ
                     PKFPCTTRYFRLGDRIEATCTHQGYTFLEFRGTVTGEADTDGSDVVHDEWWTKYSRAI
                     GGAEGQWDFPPHVVHVHQVSEPVHVETLDGELVLRDSPWDPYTELLPMEDLVDARLVT
                     SRHKERSITNGGPLDPVTFWPYADTIGGSRWPGERGGPKLAW"
     gene            1904..3034
                     /locus_tag="QGG16_07175"
     CDS             1904..3034
                     /locus_tag="QGG16_07175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25091.1"
                     /translation="MLSRFDDYPIHQTPDPIAMPASSDKDVYERYWFNGYSTTGDMYF
                     GIGTALYPHLGIRDCGISIAVDGVQHAFHASCRIEGDPADQIVGPFRLDVLEAMRSCR
                     VVLESNETDFACDLTFEGRTGNVEEPRHHWGGDIRRTMDTTRFTQMGRWAGWIEFDGR
                     RIDFDPDTTRGTKDRSWGIRPLAGGDQRGAPVPPARSSLFFLWAPLNFDDLCVHYQLF
                     EDSLGRPLSSVGALLPTYDTLADLPGIEDPGARHMRAHEHRLQFDAGSRLAHTADLSF
                     TAVDDGSRHEFHLERIFTFRMKGIGYHHPEWGHGAWKGDLAMASEKWDMDAVDDQAFE
                     NQHCQHLMRAAMGDRVGIGVLEQLCVGPYKPYGFDGFVGRSG"
     gene            complement(3037..3909)
                     /locus_tag="QGG16_07180"
     CDS             complement(3037..3909)
                     /locus_tag="QGG16_07180"
                     /inference="COORDINATES: protein motif:HMM:NF012575.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HJP25092.1"
                     /translation="MVGPPLHRPPFPVGWFAVAGVDDLPVGVLVPLAVFGQDLAVGRT
                     PGGRALVTHSVCPHLGADLAVGGRIDDDEVVCPLHEWCFSHSGACTSAADGPIPKTAR
                     LRVWPTEVVGGTVWAFNGREGEPPTSPPPVLDAVADTGVETRYRTTAEAGYRPEVRPG
                     HPEDVLAGILAYAGAIDGAPSVDDPGMWVGIGPDGLRARVCGPGALVVRLPDGADEVV
                     HVTPVDGFSVMVRTVTGTQVPDVGPTGADLSAFRAWYRRFDHSMTPTPVPARSGRAAR
                     RRASAAGAGETPAG"
     gene            complement(3915..>4120)
                     /locus_tag="QGG16_07185"
     CDS             complement(3915..>4120)
                     /locus_tag="QGG16_07185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25093.1"
                     /translation="SDGHVTHTGRPYRNTYIALWRFRDGKVCGVKEFPNPMVAAEALI
                     PVVSGSPDEFDAGDGLPDDEEEE"
BASE COUNT          742 a         1470 c         1270 g          638 t
ORIGIN      
        1 aactcgccgg gtaacggtcc gtcgccgtac acccggtcga cgggaatccc cgacagggtg
       61 cgataccggt catccggtga cgatgcttcc gaggtgcgac ctctggccct accggtgttc
      121 ttatcagtca tccctcaagg gtactaggac atccgactat ctaccaacca actgtcccgc
      181 tacgctggag ggatgcctcc cccggacgcc cccctcccct tcgacccgat ctccgaggcc
      241 cgtcgcaact gggaggccag aggttgggga gccgtggacg ccatggcagc cgccacgtcg
      301 atcacccggg cccaccagat ccttctcaag cggatcgaca cgaccctcga gtcgttcgac
      361 ctgatgttca gccgcttcga ggctctggcc ctgctgtcgt tcacccggac cggcaccatg
      421 cccatgggtc gcatgggcga acggctccag gtgcatccca ccagcgtcac caacaccgtc
      481 gaccggttgg aggcccaagg gctggtggcc agaattcccc acccgactga ccggcggacc
      541 acgctggtcg agatcactcc tgcgggacgc acacgtgtcg agagggctgc cgccgcgctg
      601 ggcgacgtgg ggttcggtct ggacggcatg aagacatcgg atctgaccgc ggtcaccaac
      661 agcctccact cgctgcgcgc cgccgccggg gacttctgat tccgctcatt acccgtaacg
      721 ggtcctcctg ccacaggtcc tccagtgccc ggccctccag aagcgggtcc gacggcaacg
      781 ggtccgctcc cctagggtcc gccccgtgat cgtctccacc gctatcgggc ttctggccct
      841 cgtgatcggc ctcatcatcg gctggccggt gctggtgctc ctgtccatca tcttcaccat
      901 cgtgcagata gtgatgctgg cggccaagac cgccgtagag cgaaacgacg tgaaggtggc
      961 cgagcgcctg gcggccaaaa aggcccgcca cgaacgcggc tgagcaccca tcgctggatc
     1021 caatcggtcc ggcggcctcc ggaccgattg gacctccggg ccgacgatcc ggcaggctga
     1081 caccatgtct gacaccacct caaccacacc cacggcccgg ccagcagata tcgccgccca
     1141 cccgaagcta aacatcgtct accggaccga tcctgaccgg atcgcaccac tgctgccacc
     1201 ggggattgaa cccaccggca gcccgaacgt gtacgtcggg atctactgcg tacccatccg
     1261 caacgaaccc gagtacggcg tgtccaccaa ggtcgacgcc gtgtggaacg gaatcgaagg
     1321 ccagtactcg ttcgggatcg gtatcgacca ggaagcggcg atcttcgtca gctccgagac
     1381 caacggccag cccaagttcc cgtgcactac ccgctacttc cgcctcggtg accgcatcga
     1441 ggccacctgt acccatcagg ggtacacgtt cctggagttc cggggcacgg tcaccggcga
     1501 agcggacacc gacgggtccg atgtcgtgca cgacgagtgg tggacgaagt actcccgggc
     1561 catcgggggc gccgagggcc agtgggattt ccccccgcat gtggtgcacg tccaccaggt
     1621 cagcgaaccg gtccacgtcg agaccctcga cggcgagctg gtgctgcggg acagcccgtg
     1681 ggatccatac accgaactcc tgcccatgga agacctggtt gatgcccgac tggtgacgtc
     1741 ccgacacaag gaacgctcga tcaccaacgg cgggccccta gatccagtga ccttctggcc
     1801 gtacgccgac accattggcg gctcgcgttg gcccggcgaa cgtggcggcc cgaagttggc
     1861 ctggtagcaa ccgcatctag atccgagaaa caggagcaca cccgtgctga gcaggtttga
     1921 cgactatccg atccaccaga cgcccgatcc gatcgccatg ccggcatcca gcgacaagga
     1981 cgtctacgag cgctactggt tcaacggcta ctccacgacc ggcgatatgt acttcgggat
     2041 cggcaccgcc ctgtaccccc acctggggat ccgagactgc ggcatcagca tcgccgtgga
     2101 cggcgtacag cacgcattcc acgcctcgtg tcgaatcgag ggcgacccgg ccgaccagat
     2161 cgttggaccg ttccgcctgg atgtcctcga ggccatgcgt tcgtgccggg tggtgctcga
     2221 atccaacgag actgacttcg cgtgtgacct gaccttcgaa ggccggaccg gcaacgtgga
     2281 ggaaccccgg caccactggg gtggcgacat ccgccgcacc atggacacca cccggttcac
     2341 ccaaatgggt cgctgggcgg gttggatcga gttcgacggc cgtcgcattg atttcgatcc
     2401 cgacaccacc cggggcacca aggaccgctc ctggggcata cggcccctgg ccggcggtga
     2461 tcagcgaggc gccccggtcc cgccggcccg atccagcctc ttcttcctgt gggcaccgct
     2521 gaacttcgac gacctgtgcg tgcactacca actcttcgag gattcgctag ggcggccgct
     2581 gtccagcgtg ggcgcactgc tgcccaccta cgacacgctg gccgacctgc caggcatcga
     2641 ggacccgggg gcccgccaca tgcgggccca tgagcaccgc ctgcagttcg acgctggcag
     2701 tcgactggcc cataccgccg acctctcgtt cactgcggta gacgacggat cacgccacga
     2761 gttccatttg gaacggatct tcaccttccg gatgaagggc atcggctacc accaccccga
     2821 atggggccac ggcgcatgga agggcgacct ggccatggct tcggagaagt gggacatgga
     2881 cgccgttgac gaccaggcat tcgagaacca gcactgccag cacctgatgc gggccgctat
     2941 gggcgaccgg gtcggcatcg gcgtgctcga gcaactgtgc gtcgggccgt acaagcccta
     3001 cggattcgac gggttcgtcg gccgttccgg ctgagctcag ccagccgggg tctccccggc
     3061 gccagcagcg ctcgcccgcc tgcgagcggc gcgaccggaa cgggccggta ccggggtagg
     3121 tgtcatcgaa tgatcgaacc gtcggtacca agctcgaaag gctgagaggt cggctccagt
     3181 cggacccacg tccgggacct gggtgccagt gaccgtccgg accatcacgg agaacccgtc
     3241 cactggggtc acgtgcacca cttcgtccgc accatcaggc agccggacga ccagcgcacc
     3301 cgggccgcac acccgggccc gtagcccgtc cggcccgatt cccacccaca taccggggtc
     3361 atcaacggaa ggtgctccgt cgatcgcccc ggcataggcc aagattccgg ccagcacgtc
     3421 ctcaggatgc cccggacgga cctccggtct atagccggcc tcagcggtgg ttcgatatcg
     3481 ggtttcaacg ccggtgtctg cgacggcgtc gagaacaggc ggtggcgagg tcggcggctc
     3541 accctcacga ccgttgaacg cccacacggt gccgccgacc acctcggtgg gccacaccct
     3601 caaccgggcc gttttcggga tggggccatc ggcggccgac gtgcacgccc cactgtggct
     3661 gaaacaccac tcgtgcagcg ggcacaccac ctcgtcatcg tcgatccgtc cgccgacggc
     3721 caagtcggcg cccagatgcg ggcagaccga gtgggtgacc agcgcccgac cgcccggggt
     3781 ccgtccgaca gccaggtcct gaccgaacac ggccaacgga acaaggacac ccacgggaag
     3841 atcgtcgacg ccagccacgg cgaaccagcc cacaggaaac ggcggccgat gcagcggcgg
     3901 tccgaccacc ccggctactc ctcctcctcg tcgtcgggca gtccgtcccc ggcatcgaat
     3961 tcgtcagggc taccggacac caccgggatg agagcctcgg cggccaccat cgggttgggg
     4021 aactccttga cgccacagac cttcccgtcc cggaaacgcc agagggcaat gtaggtgttt
     4081 cggtagggcc tgccggtgtg ggtcacgtgg ccgtcggacc
//
LOCUS       DASCMR010000303         1805 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001449086, whole genome shotgun sequence.
ACCESSION   DASCMR010000303 DASCMR010000000
VERSION     DASCMR010000303.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1805)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1805)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1805
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001449086"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..347)
                     /locus_tag="QGG16_07190"
     CDS             complement(<1..347)
                     /locus_tag="QGG16_07190"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004424 - imidazoleglycerol-phosphate
                     dehydratase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase"
                     /protein_id="HJP25094.1"
                     /translation="MARTGSRQRTTKETAIAVEIDLDRTVVADVSASTGIPFFDHMLD
                     QLGRHGGFGLQVSCDGDLNIDAHHTVEDVGIALGEAFADALGDKAGVRRFASIRVPLD
                     EALVDVALDLSGRP"
     gene            complement(349..1473)
                     /gene="hisC"
                     /locus_tag="QGG16_07195"
     CDS             complement(349..1473)
                     /gene="hisC"
                     /locus_tag="QGG16_07195"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020376916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HJP25095.1"
                     /translation="MPEFVQPQARVGVVSMEGYHSPQVDVAVRLNTNESPVPPPAGFR
                     AAVAAAVTELSWNRYPDRHATALRSALAETHGVNPMQVFAANGSNEVLQSLQLAYGGP
                     GRSVAVFEPTYAMYAQIARTTGTGVLRGTRDADHRLVADDVMALVADKQPALVFLCSP
                     NNPTGTVDPVGLVADLVDVAAGYGGLVVVDEAYGQFASTSAVDLLAEDRPLVVSRTFS
                     KTWAMAGARLGYLLAPTWCVAELDKVVLPYHLDAFKQAVGILALQYRTAMDDRIAQLV
                     AERNRMTAALDVLPVTAWPSEANFILFRPDTRSGRDVWQALVECSVLVRDFTTMAGIE
                     GCLRVTIGTADENDRFIEALGQILGGSLAEAPHEPDTEGA"
     gene            complement(1466..>1805)
                     /locus_tag="QGG16_07200"
     CDS             complement(1466..>1805)
                     /locus_tag="QGG16_07200"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: protein motif:HMM:NF013013.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HJP25096.1"
                     /translation="EHLQLMVDDAESLADRVRHAGAVFCGPWSPASLGDYVAGPSHVL
                     PTAGTARFSGALRVADFTKEVHVVSADREALERLAPHVAALAGAEGLDAHAASVRTRV
                     CHPLDRSHDA"
BASE COUNT          331 a          593 c          592 g          289 t
ORIGIN      
        1 ggacgccccg acaggtcgag ggccacgtcg accaacgcct catcgagcgg cacccggatc
       61 gaggcgaagc gcctcacgcc cgccttgtcg cccaacgcat cagcaaaggc ttcaccaagg
      121 gcgatgccaa cgtcttccac ggtgtggtgg gcgtcgatgt tcagatcgcc gtcacaggag
      181 acctgcaggc caaagccccc gtgacggccc agctggtcga gcatgtgatc aaagaaaggg
      241 atgccagtcg acgccgacac gtcggccacc accgtccggt ccaaatcgat ttccacggcg
      301 atggccgtct ccttcgtcgt acgttggcgg cttccggtgc gtgccatgtc aggccccttc
      361 ggtgtctggt tcgtgaggtg cttcagcgag ggacccaccc aggatctgcc ccagggcctc
      421 gatgaaacgg tcgttttcgt cggccgtccc gatggtgacc cggaggcacc cctcgattcc
      481 agccatggtc gtgaaatccc ggacgagcac tgagcactcg accagggctt gccagacgtc
      541 acggcccgag cgggtgtccg gtcggaacag gatgaagttt gcctccgatg gccaggcagt
      601 cacgggcagg acgtcgaggg cggcggtcat cctgttccgt tcagccacca gttgggcaat
      661 ccgatcgtcc atagccgtcc ggtactggag agccaggatc ccgacggcct gcttaaaggc
      721 atctaggtgg tacgggagca ccaccttgtc gagttcagcc acacaccagg tcggggccag
      781 gagatagccc agcctcgccc cggccatggc ccatgtctta gagaaggtcc ggctcacaac
      841 caggggacgg tcctcggcca acagatccac ggcgctcgtc gaggcgaact gtccgtaggc
      901 ctcgtcgaca accaccagac ccccatagcc cgctgctacg tccaccaggt cggccaccag
      961 cccaaccggg tccacggtcc ccgtcgggtt gttgggggaa cacaggaaga ccagcgccgg
     1021 ttgtttgtcg gctaccagcg ccatgacgtc atcggcgacc agtcggtgat cggcgtcgcg
     1081 ggtacctcga agaaccccgg tccctgtagt gcgtgcgatc tgggcgtaca tggcgtacgt
     1141 cggctcgaac accgcaacag agcgacccgg gccgccgtag gccagctgga ggctctgtag
     1201 gacttcgttg gacccgttgg cagcgaaaac ctgcatcggg tttaccccat gggtttcggc
     1261 cagcgcggac cgtagcgccg tggcgtgacg gtccgggtag cggttccagg acagttcagt
     1321 gaccgctgca gctactgccg ctcggaatcc cgcgggcgga ggtaccggcg actcgttggt
     1381 gttcaggcgg acggcaacgt caacctgagg cgagtggtaa ccctccatgc tcaccacacc
     1441 gacgcgagcc tggggctgca cgaactcagg catcgtggct cctgtcgaga gggtgacaga
     1501 cccgggtccg gacggatgcg gcgtgagcat cgaggccctc ggcgccagcc agcgccgcca
     1561 cgtgaggcgc cagtcgctcg agggcttccc gatcggcgga cacgacgtga acctctttgg
     1621 tgaagtcggc aactctgagg gcgcccgaga agcgtgcggt gccggcggtt ggtaggacgt
     1681 gactaggacc agccacatag tcgccgagcg aggccggaga ccacggaccg cagaagaccg
     1741 cgccagcgtg gcggacccgg tcggccaacg actcggcgtc gtctaccatc aactgaaggt
     1801 gctcg
//
LOCUS       DASCMR010000304         2042 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001452131, whole genome shotgun sequence.
ACCESSION   DASCMR010000304 DASCMR010000000
VERSION     DASCMR010000304.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2042)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2042)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2042
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001452131"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..470)
                     /locus_tag="QGG16_07205"
     CDS             complement(<1..470)
                     /locus_tag="QGG16_07205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25097.1"
                     /translation="MSETKAGGGTSRTTIFPGRIVHTLDPARPIASAVAVRDSRFLAV
                     GDTDQLVATYGGTIDDTLADKVLLPGFVEAHSHRDTGGIWQFTYVGYEARRGPNGRLW
                     PGCTTFDAVIERLREAERLLEDPDEPLLGWGLDPIFWPGDRLDRRHLDAVSTTRR"
     gene            848..1051
                     /locus_tag="QGG16_07210"
     CDS             848..1051
                     /locus_tag="QGG16_07210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25098.1"
                     /translation="MDRPSAFAHHRFIGDKRTQQVYDLDEVADEDAMAVVLDELMASE
                     RFLCFGPDSLAEARNRGYRLRRV"
     gene            1060..1701
                     /locus_tag="QGG16_07215"
     CDS             1060..1701
                     /locus_tag="QGG16_07215"
                     /inference="COORDINATES: protein motif:HMM:NF028177.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047869 - dimethylpropiothetin
                     dethiomethylase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfonioproprionate lyase family
                     protein"
                     /protein_id="HJP25099.1"
                     /translation="MSRDPVGALRRDLVVALVGFYNGHPDAERFPMLAEVGGHLTDAL
                     EGGGLASPDPVRLPVAHLLDEVDPRSDVLGVESVLRAFAAAAPILRWVQTPAYRATLS
                     QHYLDNYGYVRVIGRGGLVESSLVSAGLGIWGAGLHYPRHEHPAEETYHVLHGAARFQ
                     RGDGPFETKRVGESVHHQPWERHAQRFGDETCVLLWAWTGDVTVDARLIPDED"
BASE COUNT          341 a          627 c          709 g          365 t
ORIGIN      
        1 cgacgggtag tcgacacggc gtcgaggtga cgacggtcaa gccggtcacc gggccagaag
       61 atggggtcga ggccccagcc cagaaggggt tcgtcgggat cttcgagcag gcgttcggct
      121 tcgcggaggc gctcgatcac ggcatcgaag gtggtgcaac cgggccagag gcggccgttt
      181 ggtccccgtc gagcctcgta gcccacgtag gtgaactgcc agatgccgcc ggtgtcacgg
      241 tggctgtggg cctccacgaa gccggggagg aggaccttgt cggccagggt gtcatcgatg
      301 gtgcctccgt aggtggccac cagttggtcc gtgtcgccca cggctaggaa tcggctgtca
      361 cgtacggcga ccgccgaggc gatgggacgg gccgggtcga gtgtgtgaac gattcggccc
      421 ggaaagatcg tggtgcgcga ggtgcctcct cccgctttgg tctcggacat gtcggcaatg
      481 gtactccgac agtacgaatc cgtactgtcg gaacaaatgt tgggcacgtg gtgaccgtgg
      541 ggcataggtt cgcgattacc gacgagagga ggtggtccag atcagtagtg attcttccag
      601 taaacgatgt gggacttcgg aggtgggcgg ccgctgagcg gcgctgggcc attcggcgaa
      661 atccacgccg acccaccctc gggacccgac cgccggcact ggtccccgcc ggcacgaacg
      721 gtcgctcccg tgaatcccag atgaaactga agtcaagagt tccggcgtgg gggcgtgtcc
      781 gactggacac gtcctccgtc gcgttccggg ggttccccaa tcaacccccg gggctaacgt
      841 cggtggcatg gatcgaccgt cggcattcgc ccatcaccgc ttcatcggcg acaaacggac
      901 ccagcaggtc tacgacctgg acgaggtggc cgacgaggac gccatggcgg tggttctcga
      961 cgagttgatg gccagcgaac gctttctgtg ctttggaccg gattcgctgg ccgaggcccg
     1021 caaccggggc taccgactcc gcagagtctg accggcgact tgtctcgaga cccggtcggt
     1081 gccctgcgcc gagacctagt ggtcgcccta gtcggcttct acaacggcca tccggatgcc
     1141 gagcgctttc cgatgttggc tgaggtaggc gggcacctca ccgatgccct ggagggcgga
     1201 ggcctggcta gtcccgaccc ggtccggctt ccagtggcgc atctgctcga cgaggttgac
     1261 cctcggagcg acgtgctagg tgtcgagtcg gtgctacggg cctttgccgc ggcggcgccg
     1321 atcctgcgct gggtccagac acctgcgtac cgggcgaccc tctcgcagca ctacctcgac
     1381 aactacggct atgtgcgggt catcggccgc ggcggcctgg tggagtcgtc actggtgagc
     1441 gctggcctcg gcatctgggg tgccggactg cactaccccc gccacgagca tccggccgag
     1501 gagacgtacc acgtgctcca cggggcggcg agattccaac gaggagacgg cccgttcgag
     1561 accaagaggg tgggggagtc ggttcaccac cagccctggg aacgtcacgc tcagaggttt
     1621 ggcgacgaga cgtgtgtgct gctctgggcg tggacgggcg atgtgaccgt tgacgcccgc
     1681 ctcattcccg acgaggactg aacccccggt caggttgggt agtgggctcc aatagattcg
     1741 atcagcgttg gccggtcaag gacgcgtgga tcgtccgcta accgggagtt caccggatgg
     1801 atacctgcga aacaggcctt cacatcggac aactcgccct actgcccgtc gtctccgacc
     1861 cgctttggac tgccacacgg cgcccagatc gcctcgcatt cgcccggaaa tcgttcatgg
     1921 cttatgtgct tcaattgggt gatggaccgt aggcgcccta tcggccatgt ccaatcgaac
     1981 cggatcgttt gggacaactg ggctgacgag tacgtggcgg cgggccggcg ggcctggggt
     2041 ga
//
LOCUS       DASCMR010000305         1847 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001465865, whole genome shotgun sequence.
ACCESSION   DASCMR010000305 DASCMR010000000
VERSION     DASCMR010000305.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1847)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1847)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1847
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001465865"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1793)
                     /locus_tag="QGG16_07220"
     CDS             complement(<1..1793)
                     /locus_tag="QGG16_07220"
                     /inference="COORDINATES: protein motif:HMM:NF013539.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:1901135 - carbohydrate derivative metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HJP25100.1"
                     /translation="MSVFDGSVAIGAAIGDAPDRLLLALRGSGQGLYVGLAEDAYVVA
                     SEPYGVVEVTTEFVRMDGETPADPDDPGASRGQILELDGALAGTLHGMVRRSYDGRSL
                     PVTEADLARAEITTRDIDRGDHPHFLLKEIGESPDSVRATLRGRLVPVGDTPAVWRVR
                     LGEDALGADVRAGLSDGSIRRILIIGQGTAAIAGGSVARALEAELAGSDGIIVEDLPA
                     TELSGFGLTPDMSDTLVVAISQSGTTTDTNRTVDLVRTRGARVVAIVNRRNSDLVGRA
                     DGVLYTSDGRDVEMSVASTKAFYAQAVAGILLAVAIADAAGAPGAPDRADVLTGLRAL
                     PDAMVEVLGMRDQVASIASRHAPGRRYWAVVGSGPNLVAAREIRIKLSELCYKSIAAD
                     ATEDKKHIDLSSEPLILVCATGLVGSTADDVAKEVAIYRAHKALPVVVADAGSSRFAD
                     AHDVVSVPPVHPRLAFLLSTMVGHLFGYEAARAIDAQAHVLRSAHAAIEAEAERRLAG
                     GAVQATSDDPGTDSSAPEALPDALTPGLATELGAAASTFADELRNGRLNGHLEASTAV
                     RLSTLFRFALGAVPLESYQLEFGRVGTPALVL"
BASE COUNT          312 a          673 c          601 g          261 t
ORIGIN      
        1 agcaccagtg ccggcgtgcc gacccgaccg aactccaact ggtacgactc caacggcacg
       61 gcgcccagag caaaccgaaa caacgtcgac aggcgcaccg ctgtggacgc ctcgaggtgc
      121 ccgttgagcc gcccgtttcg caactcgtcg gcgaaggtac tggcggcggc gcccaactcg
      181 gtggccaagc ctggggtcaa cgcatcgggt aacgcctcgg gggcggagga gtcagtcccc
      241 gggtcgtccg acgtcgcctg gaccgccccg ccggccaagc gacgctcggc ctcggcctcg
      301 atcgccgcgt gggcggaccg cagcacgtgg gcctgagcgt caatggcccg ggccgcctcg
      361 tagccgaaca gatggccgac catggtggac agcaggaagg ccagacgggg atgcaccggc
      421 ggtaccgaca ccacgtcgtg agcatcggcg aatctcgacg agccggcgtc ggccaccacc
      481 actggcagcg ccttatgcgc ccggtagatg gccacctcct tggccacgtc atcggctgtg
      541 gaaccgacca ggccggtggc gcacaccagg atcagcggct ccgacgagag gtcgatgtgc
      601 ttcttgtcct cagtggcatc cgcggcgatc gacttgtaac agagttccga cagtttgatc
      661 cggatctcgc gggctgccac caggttgggt ccactcccca ccacggccca gtagcgccga
      721 cccggggcgt gccgtgaggc gatcgacgcc acctggtcac gcatccccag cacctcgacc
      781 atcgcgtcgg gcagggcccg caacccggtc agcacgtcgg cccgatcggg cgcaccgggg
      841 gccccggccg cgtcagcaat cgccacggct agcaggatcc cggccaccgc ctgggcgtag
      901 aaggccttcg tggaggccac gctcatctct acgtcgcgac catcggacgt gtacaacacg
      961 ccgtcggccc ggccgaccag gtcgctgttg cgccggttca cgatggccac cacccgggca
     1021 ccccgggtcc gcaccagatc gacagtgcga ttggtgtctg tcgtcgtccc cgactggctg
     1081 atggccacta cgagggtgtc ggacatgtcc ggcgtcaggc cgaagcccga gagttcggtg
     1141 gccggtaggt cctccacgat gatgccgtcg gacccagcca gttcagcctc gagggcacgg
     1201 gccaccgagc cacctgcgat ggccgctgtg ccctggccga tgatcaggat ccgtcgaatc
     1261 gatccgtcag acaggccggc ccgcacatcg gctcccagcg cgtcctcccc cagacggacc
     1321 cgccagaccg cgggggtatc gccgacaggc acaagccggc cacgcagggt ggccctgacc
     1381 gagtccggag actcgccgat ttcctttagg agaaagtggg ggtgatcgcc ccggtcgata
     1441 tcccgggtgg tgatctcggc tcgggccaga tcggcctcgg tgaccggcaa cgatcgtccg
     1501 tcatacgacc gtcggaccat cccgtggagc gtccccgcca gcgcaccgtc caactccagg
     1561 atctggcccc ggctggcccc cggatcgtcc ggatcggccg gtgtctcgcc atccatccgg
     1621 acgaactcag tcgtcacctc caccaccccg tagggttcgg aggccacgac gtaggcgtcc
     1681 tcggctaggc ccacgtaaag cccctggccg ctgcctcgca gagcgaggag gagcctgtcg
     1741 ggcgcgtcgc cgatcgccgc cccgatggcc actgacccat caaagacgct caccgcccgg
     1801 cggaatgcct cggaacgatc atggccggca gccaaatggg tggcaca
//
LOCUS       DASCMR010000306         3281 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001468760, whole genome shotgun sequence.
ACCESSION   DASCMR010000306 DASCMR010000000
VERSION     DASCMR010000306.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3281)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3281)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3281
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001468760"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..699
                     /locus_tag="QGG16_07225"
     CDS             <1..699
                     /locus_tag="QGG16_07225"
                     /inference="COORDINATES: protein motif:HMM:NF012424.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HJP25101.1"
                     /translation="RRATARHMVASKATSPHVLTAMEVDYTAVDVVRLAEKDAWRTAE
                     GTSLTYLPFIVSALCEALAEFPRLNASVGDDELIVHGTVNLAVAVDLDFEGLVAPVVR
                     GVDERSIQDVARAIVDVATRARSRSLVPDDLAGGTFTVTNPGQYGTLFQFPIINQPQV
                     AILSTDGIARRPAVVVDDDGHESIEARSMGVLALAWDHRAFDGAYAAAFLRSMKQTLE
                     GADWAARWAVGADR"
     gene            696..2393
                     /gene="lipA"
                     /locus_tag="QGG16_07230"
     CDS             696..2393
                     /gene="lipA"
                     /locus_tag="QGG16_07230"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HJP25102.1"
                     /translation="MTTTRPFRVRWLGRVRYRDALALQQRIHAEEPTTPQDHLLLLEH
                     HAVYTLGLRATLDHLLAPANEIDAEVVQADRGGDITYHGPGQLVGYPMLHLAGKRGGG
                     MADTAAYVASVEEVVMAVCRDLGLTDVGRLDRYPGVWVEPAGPRPRKVAAIGVKLTRS
                     RTMHGFALNVAPDLTHFDRMVPCGITEFGVTSLAAEGIDVTMAEVVDRVAARAIEQWA
                     AGPVDRADVAWRRFAGKPVDGEAVKGERDGDLSPFSRGAGPGEIPAPVGGGVGRKPSW
                     MRVPLDVGPGYRRLKSLIRDQGLTTVCEEAGCPNISECWNDGTATFMINGERCTRACG
                     FCLVDTRRPDAPDPDEPRRVAEAVVEMGLAHAVVTAVARDDLADHGAGAFVATIEAIR
                     GASPSTAVEVLIPDCRGDVEALSKIFDARPDVLNHNVETVARLQRTVRPSASYARSLS
                     VLARAGASGLTTKSSIMVGIGETDEEVDGCLADLAAVGCDIVTIGQYLRPTTTHLPVD
                     RWVEPGAFDRWSEVGVALGIGHVEAGPLTRSSYHARQAAQATRAAGGPVPVALSVGR"
     gene            2453..>3281
                     /locus_tag="QGG16_07235"
     CDS             2453..>3281
                     /locus_tag="QGG16_07235"
                     /inference="COORDINATES: protein motif:HMM:NF012766.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HJP25103.1"
                     /translation="MFQQRLAQVRASMVDRGVDVLLLSVGADLPYFCGYEAMPLERLT
                     MLVVPRDGDATLVVPHLEAPRVVERPEVFDMVTWRDGEDPIALVADHLAGAGTAAVGD
                     QMWAGFAVDLLSACPDLQLGRASEVTAPIRMVKDAAEIDALRNAAAAVDRILADVQAG
                     KMPLVGRTEADVAAQIARQIIDEGHQRVNFTIVAAGPNAASPHHEAGERVIRVGESVL
                     FDIGGTMAGPDGVGYCSDITRCVHVGPPASGFAELYEVLHASHAAGVAAATVGTPCAE
                     "
BASE COUNT          491 a         1108 c         1174 g          508 t
ORIGIN      
        1 cgtcgggcca cggcgcgcca catggtggcg tccaaggcca cgtcgcccca tgtgctcacc
       61 gccatggagg tcgactacac ggcggtcgac gtcgtccggc tggccgaaaa ggacgcgtgg
      121 cgtaccgccg agggcaccag cctcacctac ctgccgttca tcgtgtcggc cctatgtgaa
      181 gccctggccg aatttccgcg actcaacgcc tcggtggggg acgacgaact catcgtgcac
      241 ggcaccgtca acctcgcggt ggccgtcgat ctggacttcg aggggttggt ggcaccggtg
      301 gtacggggtg tggatgagcg atccatccag gacgtggcac gcgccatcgt cgacgtggcc
      361 acacgggccc gtagccggtc gttggtccct gacgacctgg ccggcgggac gttcacggtg
      421 accaaccccg ggcagtacgg cacgctgttc cagttcccga tcatcaacca acctcaggtg
      481 gccatcctct cgacggacgg catcgcccga cgccccgcgg tggtcgtcga cgatgacggg
      541 cacgagtcga tcgaagcccg atcgatgggt gtgctggccc ttgcctggga ccaccgggca
      601 tttgacgggg cctacgcggc ggccttcctc cggtcaatga agcagaccct ggagggagcc
      661 gactgggccg ctcgatgggc ggtcggcgcc gaccggtgac caccaccagg ccgtttcgcg
      721 tccgctggct gggacgggtc cgctaccgcg atgcgctggc ccttcaacag cggatccatg
      781 ccgaggaacc aactacaccc caggaccacc tgctcctgct ggaacaccac gccgtctaca
      841 cgctcggcct gcgggccacc ctcgaccacc ttttggctcc ggcaaacgag atcgacgccg
      901 aggtggtgca ggccgaccgg ggcggcgaca tcacctacca cggacccggc caactggtcg
      961 gctacccgat gctccacctg gcgggcaagc ggggaggtgg gatggccgac accgcggcgt
     1021 acgtggcgtc cgtggaggag gtggtcatgg cggtgtgtcg tgatctgggc ctgaccgacg
     1081 tgggtcgtct cgaccgctac ccgggggtgt gggtggagcc cgccggacct cggccccgca
     1141 aggtggcggc cattggcgtg aagctcaccc ggagtcggac catgcacggc ttcgccctga
     1201 acgtggcgcc cgacttgacc cacttcgatc ggatggtgcc gtgtggaatc accgagtttg
     1261 gggtcacctc cctggctgcc gagggaatcg acgtgaccat ggccgaggtg gtggaccgag
     1321 tggcggctcg ggcgatcgag cagtgggcgg cgggcccggt cgatcgggcc gacgtggcgt
     1381 ggcgtcgctt cgccgggaaa cccgtagatg gagaggccgt caagggtgaa cgagacgggg
     1441 atctcagtcc gttcagtcga ggggcggggc ccggtgaaat cccagctccg gtcggcggag
     1501 gggtgggccg caagccttcg tggatgcggg tgccgttgga tgtcggcccc ggctaccgac
     1561 gtctgaagtc gttgatacgc gaccagggac tgaccacggt atgcgaggag gcgggctgcc
     1621 cgaatatctc cgagtgctgg aacgacggca cggccacctt catgatcaac ggtgaacgtt
     1681 gcactcgggc ctgcggcttc tgcctcgtcg acacccgaag gcccgacgcg cccgatcccg
     1741 acgagccgcg tcgggtggcc gaggcggtcg tcgagatggg gctggcccac gcggtggtca
     1801 ctgcggtggc ccgtgacgac ctggctgacc acggggccgg cgccttcgtg gccaccatcg
     1861 aggccatccg cggagccagt ccgtcgacgg ccgtagaggt cttgatcccc gactgtcggg
     1921 gtgacgtcga ggcgctctcg aaaatcttcg acgcccggcc cgacgtgttg aaccacaacg
     1981 tggagaccgt ggctcgcttg cagaggaccg tccgcccgtc ggcgtcgtac gcccggagcc
     2041 tctcggttct ggcccgggcc ggagcctccg gcctgaccac caagtcgtcg atcatggtgg
     2101 ggatcggcga gaccgacgag gaggtcgacg ggtgcctggc cgacctagcc gccgtgggat
     2161 gtgacatcgt gaccattggg cagtacctgc ggccgaccac cacccacctg cccgtcgacc
     2221 ggtgggtcga gcccggcgca ttcgaccgct ggagcgaggt gggagtggcg ctgggcatcg
     2281 gtcacgtgga ggccggcccg ctcacccggt ccagctacca cgcacggcag gcggcccagg
     2341 cgacacgggc ggcgggcgga ccggttcccg tggccctgtc ggtcggacgc tgatcgcttg
     2401 gtgaacgggg ccgacgggcg ctgcccccga tctcgcccca taacctgacc gagtgttcca
     2461 gcagcgcctc gcccaggtcc gggcctccat ggttgaccgg ggagtcgacg tcctcctcct
     2521 gtccgtgggc gccgacctgc cgtacttctg tgggtacgag gccatgccct tggagcgcct
     2581 caccatgctg gtggtgcccc gtgacggcga cgccaccctc gtcgtacccc acctcgaggc
     2641 gccccgggtc gtggagcggc ccgaagtgtt cgacatggtc acgtggcgtg acggcgagga
     2701 cccgatcgcc ctggtggccg accatctggc cggcgccggc acggccgcgg tgggtgacca
     2761 gatgtgggcc ggcttcgccg tggacctgct gtccgcctgc cccgacctgc aactaggtag
     2821 ggcgtcggag gtaacggcgc ccatacggat ggtcaaggac gccgctgaga tcgacgccct
     2881 gcgcaacgca gcggctgccg tcgaccggat cctggccgac gtccaggccg gcaagatgcc
     2941 cctcgtgggg cggaccgaag ccgatgtggc cgcccagatc gcccgccaaa tcattgacga
     3001 gggccaccag cgggtgaatt tcaccatcgt ggcggcgggc cccaacgcgg ccagcccgca
     3061 ccacgaggcg ggtgagcggg tcatccgcgt cggtgaatcg gtcctgttcg acattggcgg
     3121 gacgatggcc gggcccgacg gggtgggcta ctgctccgac atcacccgct gcgtccacgt
     3181 tggaccgccg gccagcgggt tcgccgagtt gtacgaggtg ctgcacgcct cccatgcagc
     3241 gggcgtggcc gcagccacgg tgggcacgcc gtgtgccgaa g
//
LOCUS       DASCMR010000307         1707 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001470266, whole genome shotgun sequence.
ACCESSION   DASCMR010000307 DASCMR010000000
VERSION     DASCMR010000307.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1707)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1707)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1707
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001470266"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1693)
                     /locus_tag="QGG16_07240"
     CDS             complement(<1..1693)
                     /locus_tag="QGG16_07240"
                     /inference="COORDINATES: protein motif:HMM:NF024910.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HJP25104.1"
                     /translation="MAGFGTWLSLVLKDAFAMVGMSAYLVLIVDVDPTMLALVLIGLF
                     TLVNAVGSKASASMQLGLVVVVLSAMAWFVVQGLWETADRGVDGSNLDPFFTHGGSGL
                     VAVIGLVFVSYGGLTKVASAAEEVEDPSQRIPQGMALSLATATVLYTLGVLVTVAVVP
                     ADVLHGDLAPIHTAAETVLPKVGVWLVVVAALAAFSSAVNAGILAAARYPMAMARDGL
                     LPAWMGGLGRFGTPVFGVVSTGAAIALVVLAFDAESIAKLASAFVLLTLGLVNLAVLV
                     LRASEIKSYAPSFRSPLYPWTQLVGIAISGYLISRLGSAALVFVGVVTAVGWAWHHLY
                     ATPRTERAGAIRHVFRRWGREADDSLEREISAAMAGHGLRDRDDYAGLIARAVVLSIP
                     EGADIGEAAARASTVLSDRIGVPTERVTERFLETGSLWIQPSSDHPTATPVALFEVLD
                     VDQLVIVRASSGIRIPAAWGGSGERVNALFFLAGTTAEPGRALRLAGELAGFLHTGAR
                     ACGQAATEDEVKTALLPGQTVRQYALLPEGLDAGLIGRRIGDLSLPEEVSVAAVSR"
BASE COUNT          349 a          621 c          525 g          212 t
ORIGIN      
        1 agcgactcac cgcagctacc gaaacctcct cgggcaaact cagatcacca atgcgcctcc
       61 caatcaggcc cgcatccagg ccctcgggta acaaggcgta ctggcggaca gtctgtccgg
      121 gtagcaacgc cgtcttcacc tcgtcctcgg tggccgcctg cccgcacgcc cgtgccccgg
      181 tatgcaagaa ccccgccaac tctccggcca ggcggagcgc ccggcctggc tcggcggtcg
      241 tcccagcaag gaagaacagg gcgttgaccc gctcccccga accgccccat gctgccggaa
      301 tgcggatgcc cgacgacgcc cgaacgatga ccaactgatc gacgtccagc acctcgaaca
      361 gggcaaccgg tgtagccgtc ggatggtccg atgacggctg gatccacaac gacccggtct
      421 ccaagaaccg ttcggtaacc cgctccgtgg gcaccccgat ccgatccgac agcaccgtcg
      481 atgcacgggc ggccgcctca ccgatgtcgg ctccctcggg gatggacagc accacagccc
      541 gggcgataag gcctgcgtag tcgtcccggt cccgaaggcc gtggccagcc atcgccgcgc
      601 tgatctctcg ctccaaggag tcgtcggcct cccgacccca ccggcgaaac acgtggcgga
      661 tggcgcccgc cctctcggta cgcggcgtgg catacaggtg gtgccaggcc catccgacag
      721 cggtcaccac gcccacgaac accaaggcag ctgatcccaa acgggagatc aggtacccgg
      781 agatggcgat gccgaccaac tgggtccagg ggtacagggg cgaccggaac gacggcgcgt
      841 acgatttgat ctcggaggcc cgcaacacca gtactgccag gttcaccagg cccaaggtga
      901 gcaaaacaaa ggcgctggcg agtttggcga ttgactcggc gtcgaaggcc agcaccacca
      961 atgcaatggc cgcccccgtg gagacaacgc cgaacaccgg agtaccgaac cggcccagac
     1021 cacccatcca ggccggaagc aggccgtcgc gagccatggc catcgggtag cgagcggcgg
     1081 ccaggatgcc ggcgttgacc gccgaggaaa aggcggccag cgccgccacc acgacgagcc
     1141 acacccccac cttcgggagc acggtctcgg ccgccgtgtg gattggcgcc agatcgccgt
     1201 gcagtacatc ggccggcacc acggccacgg tcaccagtac gccgagggtg taaagcaccg
     1261 ttgccgtagc caacgagaga gccatgccct gtgggatgcg ctggctgggg tcctcaacct
     1321 cctcagcggc gctggccacc ttggtgaggc cgccgtagga cacgaacacc agcccgatga
     1381 ccgccaccag accggaaccc ccgtgggtga agaacgggtc caggttcgaa ccgtcgaccc
     1441 cccgatcggc ggtctcccac agcccctgaa ccacgaacca cgccatagct gagaggacga
     1501 ccaccacgag tcccagttgc atcgacgcgc ttgccttgga accgaccgcg ttgaccagcg
     1561 tgaacaagcc gatcaggacg agggccagca tcgtggggtc gacgtccacg atgaggacca
     1621 ggtaggcgct catcccgacc atggcgaagg cgtccttgag gacgagcgac agccaggtcc
     1681 cgaaaccggc caccgtcccc accgcgg
//
LOCUS       DASCMR010000308         1885 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001494591, whole genome shotgun sequence.
ACCESSION   DASCMR010000308 DASCMR010000000
VERSION     DASCMR010000308.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1885)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1885)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1885
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001494591"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..920
                     /locus_tag="QGG16_07245"
     CDS             <1..920
                     /locus_tag="QGG16_07245"
                     /inference="COORDINATES: protein motif:HMM:NF013720.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="aminomethyltransferase family protein"
                     /protein_id="HJP25105.1"
                     /translation="LDVGRVRYGAMVAEDGVVSDDGVTGRLGEDHWLMTTTSSGAGAV
                     WEMLEDWLQTAHPEWDVHVTAVTGGLTSINVAGPNSRTLLERLTKGVDLSADAFPYFS
                     VRQGTVADVSDCIIWRIGFTGELSYEVHVPSGHALHVWETLLETGADLGCAPFGVEAQ
                     RILRLEKGHYIVGQDTDGLSKAPTAGLGGLVKLDKPDTLGLPELKHAYERDDLPILVG
                     IQTVDGSIVPEEAAQIVDGNENTILGRITSSRMSPTLGRSICLGQVDPSMSATGTEIT
                     VLLADGRRIKALVQEHHAHFDHEGARQRV"
     gene            913..1494
                     /locus_tag="QGG16_07250"
     CDS             913..1494
                     /locus_tag="QGG16_07250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25106.1"
                     /translation="MSETTMHSPVDVGPLTSPDGGVTLADAYATTKVQVRAGTTTAAA
                     ATLGVSYGSSNRNADGDLVCGTRPDEWTIYGNPGRAGAIAASVPTEGFVTVIDITHGR
                     AMLRISGVNATASLSKICNLDLSDELTPNGAVFSGSLGAVGCDWVRDDQGGQTSFLIS
                     CERSFGKFLFTAVADACTEFGLSVPHGWELHGH"
     gene            1558..>1885
                     /locus_tag="QGG16_07255"
     CDS             1558..>1885
                     /locus_tag="QGG16_07255"
                     /inference="COORDINATES: protein motif:HMM:NF013584.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HJP25107.1"
                     /translation="MDLAGLTATEQRVLLDTGKASCRELLADCRTRAEMTEPVVNAIP
                     TVHWDTAERLASRLDNDPTLLEGEPLRGLVTAFKDLVDTAGVRTTRGSLVFEDRVPSE
                     DAPLIAH"
BASE COUNT          339 a          603 c          625 g          318 t
ORIGIN      
        1 agctcgacgt tggtcgggtg cgctacggcg ccatggtggc cgaggacggc gtcgtctccg
       61 acgacggagt gaccggtcgc cttggcgagg accattggct catgacgacg acgtcgtcgg
      121 gggccggagc ggtatgggag atgcttgagg actggctgca gaccgcccat ccggagtggg
      181 acgtgcacgt caccgccgtc accggcggat tgaccagcat caacgtggca ggcccgaaca
      241 gcaggacact gcttgaacgc ctgaccaagg gggtcgacct gagcgccgat gcatttccgt
      301 acttcagtgt gcggcagggc acggtggccg acgtgtcgga ctgcatcatc tggcggattg
      361 gcttcaccgg ggaactgtca tatgaggttc acgtgccctc agggcacgcc ctccacgtat
      421 gggagaccct gctggagacc ggagccgact tgggttgcgc cccattcggc gtcgaggccc
      481 aacggattct tcgcctggag aaaggccact acatcgtggg ccaggacacc gacgggctat
      541 ccaaggcccc gacggcaggc ctcggtggtc tggtgaagct cgacaagccc gacacgctgg
      601 ggttgcccga gttgaagcac gcttacgagc gagatgacct cccaatcctg gtgggcatcc
      661 agactgtgga cggctcgatc gttccagagg aggctgccca gatcgtggac ggcaacgaga
      721 acacgatcct tggtcggatc acctcgagcc ggatgtcgcc gacgctgggt cgatcgatct
      781 gcctcgggca ggtcgatccg tcgatgtcgg ccaccggaac cgagatcacg gtgctgctgg
      841 ccgacggtcg gcgcatcaaa gcgttggtgc aggagcacca cgcccacttc gatcacgaag
      901 gagcacgcca gcgtgtctga gaccacgatg catagtccag tggacgtcgg tccgctcacc
      961 tcccctgacg gaggtgtgac cctggccgac gcctacgcca ccaccaaggt tcaggttcga
     1021 gccggcacca ccacggctgc cgcggcgacc ttgggcgtct cctacgggag cagtaaccgg
     1081 aacgccgacg gcgacctggt ctgcggcacc cgacccgacg agtggactat ctacgggaac
     1141 ccgggccgag ccggtgcaat cgcggcatcg gtaccgaccg aaggcttcgt cacggtcatc
     1201 gacatcaccc acggtcgggc gatgttgagg atcagtgggg tgaatgccac ggcgtcgttg
     1261 tccaagatct gcaacctcga cctgtccgac gagctcacgc ccaacggcgc tgtgttcagc
     1321 ggttctttgg gcgccgtggg ctgcgactgg gtgcgcgacg accagggtgg ccagacatcg
     1381 tttctgatca gctgcgagcg gtcgttcggg aagttcctgt ttaccgctgt ggccgacgcc
     1441 tgcaccgagt tcgggctatc ggtcccccac ggttgggagc tgcacggcca ctgaccggat
     1501 ttccggtccg agaccggcaa gaagttgatc agcgacgtcc cctagggttc gccgacgatg
     1561 gatctcgcag ggttgaccgc caccgagcag agggtgctac tggacaccgg caaggcatcg
     1621 tgccgagaac tcttggccga ctgccggacc cgggccgaga tgaccgagcc ggtggtcaac
     1681 gccataccaa ccgtccactg ggataccgca gagcgcctgg ccagtcggct cgacaacgac
     1741 ccgaccctgc ttgagggtga acctctgcgt ggcctggtca ccgccttcaa ggatctcgtt
     1801 gacaccgccg gcgtccggac cacccgggga tcgttggtct tcgaggaccg cgtaccgtcc
     1861 gaagacgcac ccctgatcgc ccatc
//
LOCUS       DASCMR010000309         7596 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001499393, whole genome shotgun sequence.
ACCESSION   DASCMR010000309 DASCMR010000000
VERSION     DASCMR010000309.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 7596)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7596)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7596
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001499393"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1388)
                     /locus_tag="QGG16_07260"
     CDS             complement(<1..1388)
                     /locus_tag="QGG16_07260"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HJP25108.1"
                     /translation="MTDATHGGMKPRSHEVTDGPNRAPARAMLRAVGMNEDDFSKAQV
                     GVASSWNEVTPCNIPLDALAKRCKEGVSEAGGFPLEFNTIAVSDGISMGHEGMRASLV
                     SREIIADSVEAVMHAERLDAFVSFAGCDKSLPGMLMAAARINLPSVFVYGGSIMPGEH
                     TDGSKLDIVSVFEAVGAHAVGSIDDAELLAIEREACPTIGSCAGMFTANTMASVGEAI
                     GMSLPGSASAAAVDKRRADVAFASGHAVMNLLREGIRPRQIMTRAAFENAIAVVMALG
                     GSTNAVLHLMAIAFEAGVELELEDFNRVAAKVPHLADTKPHGKYHMVDIDRIGGVPVV
                     MQMLHDEGLLHADEITVTGKTVAENLAMLDVPAPDGDVIHAFGDPINALGGLAILRGS
                     LAPKGSVVKVAGLDFDRFDGRARVFDGEDAAMAAVLDDRIEGGDVVVIRYEGPKGGPG
                     MREMLAITGAMKG"
     gene            1435..2754
                     /locus_tag="QGG16_07265"
     CDS             1435..2754
                     /locus_tag="QGG16_07265"
                     /inference="COORDINATES: protein motif:HMM:TIGR00797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0042910 - xenobiotic transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HJP25109.1"
                     /translation="MFSTRLSADGRELLALAVPALGALIAEPLYVLADTAVVGRLGTA
                     PLAGLGVASGALLFGYGLCVFLAYGTTAAVARLTGAGESRRAADQAIQGLWLALVLGV
                     VLAIVGTLSTDAIVSGLGASGDVAEQASIYLSTSLLGAPAMLLMMAGVGYLRGLKDTV
                     RPLQVAVGTALLNLVLELVLIFGLDRGIGASAAATVVAQWVGAACYLTWIGRDVRRRH
                     ASLAPRLGSIGRLLTVSAQLLVRNLSLTGTFLIGTSVATRIGRVDVAAHQVAFQVWMV
                     TALTMDAVAIAAQAMVGERLGAGDVARAISIGRRVIAWSVGMGIVLGVVLLAVRTPVA
                     GIFSEDPAVVALAGFLLVHVAFMAPLGGVAFALDGVLIGAGDQRFMARAMAGSAVAAA
                     TVMVLGRQADLGIGWLWGAIWLFMAARSILLGLRFVGDRWQVVGAER"
     gene            complement(2788..4233)
                     /gene="gatB"
                     /locus_tag="QGG16_07270"
     CDS             complement(2788..4233)
                     /gene="gatB"
                     /locus_tag="QGG16_07270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HJP25110.1"
                     /translation="MSDDAATEIVPGWETVIGLEVHAELATATKLFCDAPNQFGGEPN
                     TNIDPVSLGLPGSLPVLNEQAVELAIRVGLALHCRVQRSVFARKNYFYPDMPKDFQIS
                     QFDLPINEEGWLELADGRQVGIERAHLEEDTGKSTHVGGGGRIHEAGYSLVDYNRAGV
                     PLIEIVGAPDLRSAEDARAYVSELRSILVAIGASDGKMEEGSMRVDCNVSVRPMGDPD
                     LGTRCEVKNINSLRSLGRAIVYESRRQVDLITSGDRVEQQTRHWNEDEGRTHKLRSKE
                     EAYDYRYFPEPDLVPLDPSAEWIESVRSALPLLPRERRHRLADAAGVDTATASLTVER
                     GMDDLAVEALAAGADPSRVLVHVENNLADGSGLLTAASFVSLVAMEVGGDLTATQAKT
                     VLAVLVADGGEPAEVAAGMGFEAMDDSALEAIVDGLIAEYDEDWAAFTSGDDKERKKK
                     SGFFVGQIMKATNGQADGRVVNELLSRRANG"
     gene            complement(4230..5732)
                     /gene="gatA"
                     /locus_tag="QGG16_07275"
     CDS             complement(4230..5732)
                     /gene="gatA"
                     /locus_tag="QGG16_07275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HJP25111.1"
                     /translation="MSRPMETTAQNLAADVRSGTRSARAVLEEHLVVIESREDEVHAF
                     NLVLADEARASADAVDALVANGEDPGPLAGVPVALKDNLCTRGVPTTCSSRILEGWRP
                     PYDATVVERLVAAGAVVVGKTNLDEFAMGSSTENSAFGATHNPLDLTKVPGGSSGGSA
                     AAVAAGFTPLALGSDTGGSIRQPAALCGVVGVKPTYGMVSRYGLVAFASSLDQIGPFS
                     RTVADSALVLEVIGGHDRRDSTSIHEPAPDLRSVLDRGVEGLRIGIIEELSGDGLEGI
                     AADVRARLHEAAAALEAAGATVATTSVPSTVYGLSAYYVVAPAEASSNLARYDGVRFG
                     LRVDAATSGDMHAATRTAGFGDEVKRRIMLGTYALSAGYYDAYYGKSQKVRTLLADDF
                     TRAYEEFDLLLSPTAPTTAFPIGEKTADPMTMYLNDVCTIPSNLAGHPSMSVPFGVGD
                     DGMPIGVQVLAPATGEPTMFRAAAVLEASAPPGHPDVGGAVTGPTGGATA"
     gene            complement(5729..6031)
                     /gene="gatC"
                     /locus_tag="QGG16_07280"
     CDS             complement(5729..6031)
                     /gene="gatC"
                     /locus_tag="QGG16_07280"
                     /inference="COORDINATES: protein motif:HMM:TIGR00135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030956 - glutamyl-tRNA(Gln)
                     amidotransferase complex [Evidence IEA];
                     GO_function: GO:0050567 - glutaminyl-tRNA synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HJP25112.1"
                     /translation="MTERISRSDVAHVANLAHLSLTDDELEAFTGQLADVLDHAADLE
                     ALDLDDVEPMIHPLPLRNVLRPDVVGATSDRSEVLACAPSVEDEQFRVPPVLGEAP"
     gene            complement(6093..>7596)
                     /locus_tag="QGG16_07285"
     CDS             complement(6093..>7596)
                     /locus_tag="QGG16_07285"
                     /inference="COORDINATES: protein motif:HMM:NF019334.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="PASTA domain-containing protein"
                     /protein_id="HJP25113.1"
                     /translation="NLLFGQDARLRIADFGLADALTGSASRELFGGGGVIGTARYASP
                     EQAQGHPLDGRSDVYALALCMVEAVTGHLPFVADTIADTLVARVGQNVPIPEALGPLV
                     PVVASAGTADVENRPSARELGRLLLDVAGRMSRPEPLPLVGPGEVGAAPMPGEAEHGA
                     PSVFTDPGPATQAHSPIQAHSPVHGQTPARAASPVRPRRRWRGALLVATLLVGAVVGG
                     SVLLSAGRTTTRAVPALVNTSGDSARSLLIELGWLVEERYDRRDDTLEGQVLSMQPAS
                     GARLEAGETVVLVVSLGPARMPVPDDLVGVSLEEAGRRLDDAGLTLGTVSTQKDEAMA
                     AGLVISVTTIDETVPQGSAIDLVVSGGPLPRLVPEGLVGLMPADAVAELIALRLAPTM
                     GEEYDEWVAAGRVARVEPVGGTRVEVDDDVRVVVSLGAEPRAVPSMEGLSLAAAESRL
                     AASGFRSVVVEGLPDGDDVDRALQVVVSQTPSAGRREMPSTTVTLVVSPA"
BASE COUNT         1184 a         2636 c         2539 g         1237 t
ORIGIN      
        1 cccttcatgg ccccggtgat ggccagcatc tcgcgcattc ccggaccacc cttgggaccc
       61 tcgtagcgga tgaccaccac gtcaccgccc tcgatgcggt cgtccagaac ggcggccatg
      121 gccgcatcct caccgtcgaa cacccgggcc cgaccgtcga agcggtcgaa gtcgagtccg
      181 gccaccttga ccaccgaccc cttcggagcc aacgacccgc gaaggatggc caggccaccc
      241 agtgcattga tcggatcgcc gaaagcgtgg atcacgtcac catcgggggc cgggacgtca
      301 agcatggcca ggttctcggc caccgtcttc ccggtgacag tgatctcgtc ggcgtgaagc
      361 aggccctcgt cgtgaagcat ctgcatgacc accggaaccc caccgatccg atcgatatcg
      421 accatgtggt acttcccgtg gggcttcgta tctgccaggt ggggaacctt ggcggccacc
      481 cggttgaagt cctcgagttc gagctcgaca ccggcctcga aggcgatggc catgaggtgg
      541 agtacggcgt tcgtcgagcc gccgagagcc atcaccacgg cgatggcgtt ctcaaaggca
      601 gcccgggtca tgatctggcg gggtcgaatg ccctctcgca gcaggttcat cacagcgtgg
      661 ccgctggcga acgccacgtc ggcccgacgc ttgtcaaccg cggcggccga ggccgatccg
      721 ggcagcgaca tgccgatggc ctcaccgacc gaggccatgg tgttggcagt gaacatcccc
      781 gcgcagcttc caatggtcgg acacgcctcg cgctcgatgg ccagcagttc agcatcgtcg
      841 atgctcccca ctgcgtgggc ccccacggcc tcgaacacgc tcacgatgtc cagcttggaa
      901 ccgtcggtgt gttcgccggg catgatcgaa ccgccgtaca cgaacaccga cggcaggttg
      961 atccgggctg ctgccatgag catccccggg agcgacttgt cacagccggc gaagctcaca
     1021 aaggcgtcga ggcgctcggc gtgcatcacg gcctctaccg agtcggcgat gatctcacga
     1081 ctcaccaggc tggcccgcat gccctcgtgg cccattgaga tgccgtcgga cacggcgatg
     1141 gtgttgaact ccagcgggaa gcccccggct tcggagaccc cctccttgca ccgtttggcc
     1201 agtgcgtcca gcggaatgtt gcagggagtc acctcgttcc acgacgaggc cacgcctact
     1261 tgggccttgg agaagtcgtc ctcgttcatc ccgaccgccc ggagcatggc ccgcgcgggc
     1321 gcccggttcg gaccgtcagt gacctcatgg cttcggggct tcatcccccc gtgggtggca
     1381 tccgtcatgg gtatgcaggc taggcgccac ctgccacggt cgtagtctcc gctgatgttc
     1441 tccacacgac tctcggccga cggccgggaa ctcctcgccc tggccgttcc ggccctcggg
     1501 gcactgatcg ccgaacccct ttacgtgctg gccgatacgg ccgtggtggg ccgtctggga
     1561 accgctcctc tggccggcct cggcgtggcg tccggcgccc tactgttcgg ctacggactg
     1621 tgtgtcttcc tcgcctacgg gaccacggcg gcggtggccc gtctgaccgg cgccggagag
     1681 agtcggcggg cagccgatca ggccatccag ggcctgtggc tggccctggt cctcggtgtg
     1741 gtgctggcca ttgtgggaac cctgtcgacc gacgccatcg tgtccgggct gggcgcctcg
     1801 ggcgacgtgg ccgaacaggc ctccatctac ctgagtacca gcctgctggg tgccccggcg
     1861 atgctcctga tgatggccgg ggtgggctac ctccgtggcc tcaaggacac cgtgcgcccc
     1921 ctgcaggtgg ccgtgggtac cgccctactc aacctggtcc tcgagctggt cctcatcttc
     1981 ggcctggatc ggggcatcgg cgcctcggca gccgccaccg tggtcgccca gtgggtgggg
     2041 gccgcctgct acctaacctg gatcggacgg gacgtccgta gacgccacgc gtcgctggca
     2101 ccccggttgg gatctatcgg ccgactcctc accgtcagtg cacagttgct ggtgcgaaac
     2161 ctctcgctca ccgggacgtt cctgatcggc acctcggtgg ccacccggat cggccgggtc
     2221 gacgtggccg cccaccaggt ggctttccag gtgtggatgg tcaccgcgct gacgatggac
     2281 gctgtggcca ttgccgccca ggccatggtc ggcgaacgcc tcggcgcggg ggacgtggcc
     2341 cgcgccatct cgatcggacg ccgggtgatt gcctggtcgg tgggcatggg catagtcctc
     2401 ggtgttgtcc tgctggccgt ccggacaccg gtggcgggca tcttctccga ggatcctgct
     2461 gtggtggcct tagccggatt cctgctggtc cacgtggcct tcatggctcc gctcggaggc
     2521 gtggccttcg ccctggacgg tgtccttatc ggagcaggag accaacggtt catggctcgg
     2581 gccatggcgg gctcggcggt cgctgccgcc acggtcatgg tgctcgggcg acaggccgat
     2641 ctggggattg gttggctctg gggggccatc tggctcttca tggccgccag gtcgatcctg
     2701 ctgggtctcc gcttcgtcgg cgaccgctgg caggtggtgg gcgccgagcg ctagccactg
     2761 attgggggcc agttggcgcc cgggtaccta cccgttggcc cggcgggaca gcagttcgtt
     2821 gacgacccga ccatcggcct gaccgttggt ggccttcatg atctggccga cgaaaaagcc
     2881 tgacttcttc ttgcgttcct tgtcgtcgcc cgaggtgaag gcagcccagt cttcgtcgta
     2941 ctcggctatc aagccgtcca cgatggcctc cagggcactg tcgtccatgg cttcgaatcc
     3001 catgcccgca gccacctcgg ccggctcccc gccgtcggcc accagaaccg ccaggacggt
     3061 cttggcttgg gtggccgtca ggtcgccgcc gacctccatg gccaccagcg aaacgaacga
     3121 cgccgcggtc aacaaccccg acccgtcagc caggttgttc tcgacgtgga ccagcaccct
     3181 gctcgggtcg gccccagcgg caagggcctc cacggccagg tcgtccattc cccgctcgac
     3241 ggtcaacgat gcagtggccg tgtccacgcc ggccgcgtca gctaggcggt ggcgacgctc
     3301 ccggggcagt aggggcaaag cggaacgcac cgattcgatc cactcggcgg acgggtccag
     3361 gggcaccaga tcaggctccg ggaagtaccg gtagtcgtat gcctcctcct tggagcggag
     3421 tttgtgggtg cgaccctcgt cttcgttcca gtggcgggtc tgctgctcga ctctgtcacc
     3481 ggaggtgatg aggtcaacct gacggcgaga ctcgtagacg attgcccgtc ccagcgagcg
     3541 cagcgagttg atgttcttca cctcgcagcg ggttcccaaa tcggggtcgc ccatgggtcg
     3601 gaccgacacg ttgcagtcca cccgcatcga tccctcctcc atctttccgt ccgacgcgcc
     3661 gatggccacc agaatcgacc gcagctcgct gacgtaggcc cgtgcgtctt cagctgaccg
     3721 caggtcggga gctcccacga tctcaatgag tggaacgcca gcccggttgt agtcgaccag
     3781 cgagtaaccg gcctcgtgga tccgaccgcc accacccacg tgcgtgctct tgccagtgtc
     3841 ctcctctagg tgtgcccgct cgatgcccac ctggcggcca tcggccaact ccagccagcc
     3901 ctcctcgttg atgggcagat cgaactggga aatctggaaa tccttcggca tgtccgggta
     3961 gaagtagttc tttcgggcaa acaccgaacg ctgcacacga cagtgcaaag ccaggccgac
     4021 ccgaatggcc agttccaccg cctgctcgtt gagcacgggt agcgagcccg gcaggcccag
     4081 cgacaccgga tcgatgttgg tgttgggctc gccgccgaac tggtttgggg catcgcagaa
     4141 cagtttggtg gccgttgcca gttcagcgtg gacctccagg ccgatcaccg tctcccaccc
     4201 ggggacgatc tcagtggctg cgtcgtcgct catgcggtcg ctccaccggt cggcccggtc
     4261 acggctccac ccacgtccgg gtgccccgga ggggcggagg cctcaaggac cgctgcggcc
     4321 cggaacatgg tcggctcgcc ggttgccggt gccagcacct gcacgcctat cggcatgccg
     4381 tcgtcgccga cgccgaaggg caccgacatc gagggatgtc cggccaggtt cgacgggatg
     4441 gtgcacacgt cgttgaggta catggtcatg ggatcagccg tcttctcgcc gatcgggaag
     4501 gccgtggtgg gcgccgtcgg gctgagcagc aggtcgaact cctcgtaggc ccgggtgaag
     4561 tcgtccgcga gcagcgttcg gaccttctgc gacttgccgt agtaggcgtc gtagtacccg
     4621 gccgacaggg cgtaggtgcc aagcatgatc cgacgcttca cctcgtcgcc gaatccggcg
     4681 gtgcgggtag cggcgtgcat gtctcctgag gtggcggcgt caacccggag gccgaaccgc
     4741 acgccgtcgt atcgggccag gttcgatgaa gcctcggcgg gtgccacgac gtagtacgcc
     4801 gacaggccgt acaccgtcga cggaaccgag gtggtggcca ccgtggcccc ggccgcctcc
     4861 aacgcggcgg ccgcctcgtg caggcgggcc cggacatcgg cggcaatgcc ctcgagaccg
     4921 tctcccgaga gttcttcgat gatgccgatg cgcaggccct cgacaccgcg gtccagcacc
     4981 gaacgcaggt cgggtgcggg ttcgtggatg gacgtggaat cgcgacggtc gtggccgccg
     5041 atgacctcca gcacgagcgc cgagtcggcc accgtgcggg agaacgggcc gatctggtca
     5101 aggctggagg cgaaggccac gagcccatag cgggacacca tcccgtacgt tggcttgaca
     5161 ccgaccacgc cacacagcgc tgcgggctgg cggatcgacc cgccggtgtc gctgccgagg
     5221 gccagaggtg tgaatccggc ggccaccgcg gcggccgatc caccagacga cccgccgggg
     5281 accttcgtca gatccaacgg attgtgggtc gccccgaacg ccgagttctc cgttgagctc
     5341 cccatggcga actcgtcgag gttggtcttg ccgaccacca ccgcaccggc cgcaacgagg
     5401 cgttcgacca ccgtggcgtc gtagggcggt cgccatccct cgaggatccg cgacgagcag
     5461 gtggtgggca ccccgcgggt gcacaagttg tccttcaacg ccaccgggac gccggccaat
     5521 gggcccgggt cctccccgtt ggccacaagg gcatcaacgg cgtcggccga cgcgcgggcc
     5581 tcgtcggcca gcaccaggtt gaaggcgtgc acctcgtcct cccgggactc gatgaccacc
     5641 aagtgctcct cgagcaccgc tctggccgac cgggtgcccg agcggacgtc ggcggccagg
     5701 ttctgtgccg tggtctccat gggtctactc acggggcctc acccagcacc ggcgggacgc
     5761 ggaactgctc gtcctccacc gacggcgcac aggccagcac ttcggaccgg tcgctggtcg
     5821 caccaaccac gtcggggcgc agcacgtttc gcagcgggag cggatgaatc atcggctcca
     5881 cgtcgtccag gtccagagcc tcgaggtcgg ccgcgtggtc cagcacgtcg gccaactggc
     5941 cggtaaaggc ctcgagttcg tcatcggtca gcgacaggtg ggccaggttg gccacgtggg
     6001 ccacgtcact tctggagatg cgttcggtca taggaggagc ctcgtcgggg gcgattggac
     6061 ggcgagatga aaggccggaa gaacgatacg actcaggcgg gactgaccac gagtgtcacc
     6121 gtggtgctcg gcatctcgcg ccggccggcc gacggcgtct gggacaccac gacctgcaac
     6181 gcacgatcca catcgtctcc gtcgggtagc ccctcgacga ccacgctgcg gaagcctgag
     6241 gcggccaggc gactctcggc tgcagccagt gacaggccct ccatggacgg cacggctcgg
     6301 ggctcggcgc cgagcgagac caccacgcgg acgtcgtcgt cgacctcgac ccgggttcct
     6361 ccgaccggtt cgacacgcgc cacccgtccg gcggccaccc actcgtcgta ctcctcgccc
     6421 atggtggggg ccagacgcag agcgatcagt tcggccaccg cgtcggctgg catcaggccc
     6481 accaagccct cgggcaccaa ccggggcaac gggccaccgg acaccaccag gtcgatcgca
     6541 gaaccctggg gcaccgtctc gtcgatggtg gtaaccgaga tgaccagacc ggccgccatg
     6601 gcttcgtcct tctgggtcga caccgtgccc aacgtcaggc cggcatcgtc gagacgacgc
     6661 cccgcctcct cgaggcttac gccgaccagg tcgtcgggca ccggcatccg agccggcccg
     6721 agcgaaacca ccagtaccac tgtctcgccg gcctccagtc gggcaccgct ggccggctgc
     6781 atggacaaca cctgaccctc gagggtgtcg tcccgacggt cgtaacgctc ctcgaccagc
     6841 cagcccagtt cgatgagcaa cgaccgtgcg ctgtcacccg aggtgttcac cagcgccgga
     6901 acggcacggg tggtcgtgcg cccggccgac aacagcacac tgccgcccac caccgcaccg
     6961 actaggaggg tggcgaccag cagggccccc cgccagcggc ggcgaggccg gaccggggac
     7021 gccgcccggg caggtgtctg tccgtggacc ggcgaatggg cctggatagg ggaatgggcc
     7081 tgggtggccg ggccgggatc ggtgaacacc gacggtgcgc cgtgttcggc ctcgccgggc
     7141 atcggggcgg cgccgacctc gccgggaccc acgaggggca gtggctcggg tcgggacatc
     7201 cgcccagcca cgtcgagtag tagacggccc agttcacggg ccgacgggcg gttctccaca
     7261 tcagcggtcc cggcactagc gaccaccggc accagcggtc cgagggcctc gggaatgggg
     7321 acgttctgcc cgacgcgggc taccagcgtg tcggcgatgg tgtcagccac gaaggggagg
     7381 tggccggtca ccgcctcgac catgcagagg gcgagggcgt agacgtcgga acgaccgtcc
     7441 aacggatggc cctgggcctg ctcaggcgag gcgtaccgtg ccgtgccgat cacgccgcct
     7501 ccgccgaaca actcccggct ggccgagccg gtcagggcgt cggccagacc gaagtcagca
     7561 atacgcaggc gggcgtcttg tccgaagagc aggttg
//
LOCUS       DASCMR010000310         9246 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001499814, whole genome shotgun sequence.
ACCESSION   DASCMR010000310 DASCMR010000000
VERSION     DASCMR010000310.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 9246)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9246)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9246
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001499814"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2038)
                     /locus_tag="QGG16_07290"
     CDS             complement(<1..2038)
                     /locus_tag="QGG16_07290"
                     /EC_number="3.1.6.-"
                     /inference="COORDINATES: protein motif:HMM:NF013080.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008484 - sulfuric ester hydrolase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arylsulfatase"
                     /protein_id="HJP25114.1"
                     /translation="MTAVPRPTPPYKGTIGRLTEDCVPDPIVLDSAPEDAPNVVLVLL
                     DDVGFGSFGAFGGPVPAPGLERVAAEGLRFNRFHTTAICAPTRASMLTGRNHHTVHMG
                     RITEAANGFPAYDSIIPREAATVAEVLRQNGYTTGMFGKGHLTPSWETGPAGPFDRWP
                     TGLGFDRFYGFPGAETSQFEPDLYDQTTPIAPYEGRDDYHLTEDMADKAIEWMQRVKA
                     HRPDKPFLCYFSPGAVHTPLQVPDAWLDRFSGFFDEGWDDLRQSIFERQLEMGVIPSG
                     TVNTSRPDVVPSWDEYPDRYKPVARRLMEVFAAFLAHTDAQVARLIDALEGIGEWENT
                     LFIYVTGDNGASAEGRIDGTWSLPALQNGFEEDPEFLLQHINDFGTEHSECHYNVGWA
                     WALDAPFQWMKQVASHFGGTRNGLAVSWPRRITDAGAIRDQFHHVIDLAPTILAAAGI
                     EPPTSVNGIDQMPIEGQSMLASFTDPGVEGRRTQYFEMMGNRGIYHEGFMASCFHGRL
                     PWIRFGSVPFDGPQESWELYDLREDFSQSHDLADERPELLAEMRDLFDAECLRNGVYP
                     LRDAAMNLDPAMRAPSVPVGVTRMTYTTAHVRMPERVVLNIKNRSYRITCDLEVPEGT
                     PEGVIVCQGGSFNGWAIYLDEGRPTWHYNLYGHVRTTVAAVEPLAPGRREVALLF"
     gene            2131..3348
                     /locus_tag="QGG16_07295"
     CDS             2131..3348
                     /locus_tag="QGG16_07295"
                     /inference="COORDINATES: protein motif:HMM:NF014790.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP25115.1"
                     /translation="MSDFPNDMTAGAAFAEFRAEVQSFLHEYDRRPVAPGLSRLDRGR
                     AFLAARYDAGLGALDYPVADGGRGLDRRFVDVYRQEAEGRTTDDGGSGFSIGLDMCLP
                     TIRDHGSPELRQRFLGPGLRGDEHWCQLYSEPGAGSDLAGLTTRAVRDGDEWLVTGQK
                     VWTSGADHADFGILLARTDWDVPKHTGISMLVLPMRQPGVVVRALHQMTDVAHFNEVF
                     MDEARVPVDWVVGGPGNGWKMAVALLAYERSSLGKGSGRQPIPTDRLIELAQANGRSQ
                     DPVVRQNLARLATGTRLIEWLNLRTGIHPSITKLWRTQQGHTAAHVAAGLAWPGGIAW
                     DGSRMGTTQTGRFADADGSHWAYGICDSPALSLAGGTDEIQKNTLGERVLGLPREPAG
                     NRDTPFSQIPKNV"
     gene            complement(3323..3955)
                     /locus_tag="QGG16_07300"
     CDS             complement(3323..3955)
                     /locus_tag="QGG16_07300"
                     /inference="COORDINATES: protein motif:HMM:NF012655.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HJP25116.1"
                     /translation="MTTGGSSPKGADEVREALVAAAARLLGHSAPKRISGRALAEEAG
                     VNYGLVHHYFGGKEALLRAGFDRLTESYAAVEELDTSGRVEPFSLLRAPEFVRAVAYA
                     SLSGEADRTHVTHPTLDVAVEQTLETRTGEDETEVRVDVGIATVFHLARCLFATTMDP
                     WIARGGEDPLLAEEVEERLALILRSLSLGLDPGTAARGEREPFRRSSVSD"
     gene            complement(3952..4527)
                     /locus_tag="QGG16_07305"
     CDS             complement(3952..4527)
                     /locus_tag="QGG16_07305"
                     /inference="COORDINATES: protein motif:HMM:NF012655.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HJP25117.1"
                     /translation="MGVDPDGEPSSRTALLDAAIRLMSERPPSTVTGRALAEEAEVNY
                     GLVHYYFESSGDLLRAARGRHGSRLLADSMAGGTRPIPLNQVVSDREIFGFAAHVALE
                     GGYDDEDVSHPVFDAMLGMATEGDQDGDPVHHRATVAAIVLLQLGWPVFVEHNATGLG
                     LDLEADGEVIRDRFFTVLESLYRSIGVEVER"
     gene            complement(4527..5291)
                     /locus_tag="QGG16_07310"
     CDS             complement(4527..5291)
                     /locus_tag="QGG16_07310"
                     /inference="COORDINATES: protein motif:HMM:NF012596.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HJP25118.1"
                     /translation="MTHHKVDDHTPDNPVLLEVKDGLATIVLNRPGRKNAIVGPLSDA
                     LAACFAEASDRDDVGAVLLHGAGGGFCSGLDLTEYNADPPPTWIGTASSSFAAAHRAI
                     AECPVPVVGALERFAINGGAGLALACDLLVAGEGAFLQVGEVRQGMPAAMNLAWLSGR
                     HPLSVIHQITLSGRRFSGLDLHRLGIALDVVADDEVLDAARRLALEIAGFPGSAGRMM
                     KEHTAGMVADVVTSADRIDRGAALLAAAGQLRPART"
     gene            5470..5592
                     /locus_tag="QGG16_07315"
     CDS             5470..5592
                     /locus_tag="QGG16_07315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25119.1"
                     /translation="MSTGEVGMVELGEVPPPLVDHQAKTDLFGITLPREWGGLG"
     gene            complement(5646..6362)
                     /locus_tag="QGG16_07320"
     CDS             complement(5646..6362)
                     /locus_tag="QGG16_07320"
                     /inference="COORDINATES: protein motif:HMM:NF014035.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HJP25120.1"
                     /translation="MTPIEIVLVVVAVAAGSLVQASAGIGIALVASPVLMAVDPAFVP
                     LPLILGGTVVGIRNVTMEFSGFDAKRWRKCLLGAPVGLVLGELALAGLSERGLTLAVG
                     VLVVLSVVAVGSGWKPPSRRWMSVLAGVLTAFTLRVAALPGPPYAILHHDDPPQVLRP
                     NLAGFVMVLSAVVTVRLLVGGAIDGAEVGRIALVMGSAVIGLVLAPPVRRWVDSEWFR
                     PVLLGICGLGGLATIVGALT"
     gene            6455..7546
                     /locus_tag="QGG16_07325"
     CDS             6455..7546
                     /locus_tag="QGG16_07325"
                     /inference="COORDINATES: protein motif:HMM:NF024989.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-dependent alcohol dehydrogenase"
                     /protein_id="HJP25121.1"
                     /translation="MRAAVLHEAPGDLVVEDLTIAKPIGREVLIRTKASGLCHSDLHV
                     IEGLLPLPSLPAALGHEASGIVEAVGPDVTAFAPGDHVITCLTQFCGVCPECHVGRVF
                     ICSNRHDLARGPELEPTLSLDGTPVLPMAGLGAFAEQILVHENGVVAVDPAVPFDVAA
                     LIGCAVMTGVGSATNGAQIRPGETVAVIGCGGIGLNIVQGCRLAGASRIIAVDLNAEK
                     LEAARGFGATDVVDASTDDPVAAVQALTGGGVDAAFEAIGLTATGEQALAMIRPGRTA
                     YLVGVPPITSTMTVPGALMVLQAKGLRGLFMGNSNFKVEMPNLARHYLEGRLELDRLV
                     SAHITLDEVNDGYTELKAGATLRSVIMFD"
     gene            complement(7568..8299)
                     /locus_tag="QGG16_07330"
     CDS             complement(7568..8299)
                     /locus_tag="QGG16_07330"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012905.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HJP25122.1"
                     /translation="MLIRAVTFDLWNTLLTSVPGGLEIRRRHWQEVIDERKLDIPAEL
                     LWGVLSILPDRFETEWRAGRHYGPERALDECFVAFGDRLEGGDRQALAAAFDFASYQL
                     RVMSVPDAADVLSAVARSGVAVGIISDTNLAIGRHLRTYLAEHGILEHVAFAAFSDEV
                     GVYKPDPAIFRAAMDGLGIDDPTTIVHVGDLKRTDVAGARAMGMGTVRFRGALDDLED
                     GAEADHVIDCLADLSRLFPALVAGS"
     gene            complement(8337..>9246)
                     /locus_tag="QGG16_07335"
     CDS             complement(8337..>9246)
                     /locus_tag="QGG16_07335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="malic enzyme-like NAD(P)-binding protein"
                     /protein_id="HJP25123.1"
                     /translation="MEGKALLFKEFAGVDAFPICLDVTDPQEIIDTVIRLAPTFGGIN
                     LEDIAAPAAFHVEEALRTALDIPVFHDDQHGTAVVTLAALWNACRLTGRDMGDLSVVI
                     AGMGAAGVAVGKILLNAGVGEIVGVDRMGAVYSGRDNLNVAKEWFADHTNPDRKMGSL
                     KDVLVGTDVFVGVSGPGLIDAADLRTMNPDPIVFAMANPEPEIHPEEADGLAAVMATG
                     RSDYPNQINNVLAFPGIFRGALDVGATDITENMKLAAARAIADSVSEADLKPSFVVPS
                     VFDKSVPYRVAEAVAAAAVADGVCRT"
BASE COUNT         1700 a         3124 c         2942 g         1480 t
ORIGIN      
        1 cgaacaacag cgctacctcc cggcggccgg gtgccaacgg ttcgactgcg gcgactgtgg
       61 tacggacatg gccatagagg ttgtaatgcc acgtcggccg accttcgtcg aggtagatcg
      121 cccaaccgtt gaagctcccg ccctgacaga cgatgacccc ttctggcgtc ccctcaggca
      181 cctcgaggtc acaggtgatc cggtaagagc gattcttgat gttcaggacg acccgctcgg
      241 gcatccgaac gtgcgccgtg gtgtaggtca tccgggtgac cccgaccggc accgacggtg
      301 ctcgcatcgc cggatccagg ttcatcgccg cgtctcgcag cgggtatacc ccgtttcgca
      361 gacactcggc gtcaaacagg tcacgcatct ccgccagcaa ctcgggtcgc tcgtcggcca
      421 gatcgtggct ctgggagaag tcctcacgca ggtcatagag ttcccacgat tcctgtggac
      481 cgtcgaaggg aaccgagccg aaccggatcc acggcaaccg gccgtggaaa cacgacgcca
      541 tgaaaccttc gtggtagatg ccgcggttgc ccatcatctc gaagtactgg gtacgtcggc
      601 cctccacccc gggatcggtg aacgacgcca acatcgactg gccctcgatg ggcatctggt
      661 cgatcccgtt caccgaggtc ggtggctcga tacccgccgc ggcgaggatg gtgggggcaa
      721 gatcgatgac gtggtggaac tggtctcgaa ttgctccggc gtcggtgata cgacggggcc
      781 acgacacggc cagcccattg cgtgtgccgc cgaaatgcga tgccacctgc ttcatccact
      841 ggaaaggcgc gtccagtgcc catgcccaac ccacgttgta gtggcattca ctgtgctcgg
      901 tcccgaagtc gttgatgtgt tggagcagaa actccgggtc ctcctcgaaa ccgttctgga
      961 gggccggtag cgaccaggtg ccgtcgatac gaccctcggc cgacgccccg ttgtcgccgg
     1021 tgacgtagat aaagagtgtg ttctcccact cgccaatgcc ctcgagagcg tcgattaggc
     1081 gggccacctg agcatcagtg tgagccagaa aggcggcgaa cacctccatg aggcggcggg
     1141 ccaccggctt ataccggtcg gggtactcgt cccatgatgg gaccacgtca gggcgggatg
     1201 tgttaaccgt gcccgacggg atgacaccca tctcgagttg ccgctcgaag atggactggc
     1261 ggaggtcgtc ccacccctcg tcgaagaacc cactgaagcg gtccagccat gcgtccggta
     1321 cctggagggg ggtgtggacg gcccccggcg agaaatagca gaggaacggc ttgtcgggcc
     1381 ggtgggcctt gacccgctgc atccactcga tggccttatc ggccatgtcc tcggtgaggt
     1441 ggtagtcatc gcgcccctcg tagggggcga ttggtgtggt ctggtcgtac aggtcaggtt
     1501 cgaactgcga ggtctcggct ccggggaacc catagaagcg gtcgaacccc aggccggtag
     1561 gccaacggtc gaacggcccg gccgggccgg tctcccatga tggggtgagg tggcccttgc
     1621 caaacatgcc ggtggtgtag ccgttctggc gtagcacctc ggccacggtg gccgcttcgc
     1681 gaggaatgat cgagtcgtaa gctggaaagc cattggccgc ctcggtgatt cgacccatgt
     1741 ggacggtgtg gtggtttcga ccggtcagca tcgaggcccg ggtgggagcg cagatggccg
     1801 tcgtgtggaa acggttgaag cgcagtccct cggcggccac ccgttccagc ccgggcgccg
     1861 ggaccgggcc tccgaaggcc ccgaacgacc cgaagccaac gtcgtcgagc agcacgagca
     1921 cgacattggg agcgtcctcc ggggcggagt ccaggacgat cgggtcgggt acgcagtcct
     1981 cggtgaggcg cccgatggtt cccttgtagg gcggggtggg acgggggacg gcggtcattg
     2041 gtcaggatct ccaactctgc gggcaagaac tgggctcgct ggggctggcc agtggcccca
     2101 ttcttggcca tctggctaac atgcggtcac atgagtgact tccccaacga tatgactgcc
     2161 ggcgccgcct ttgccgagtt cagggccgag gtccaatcct tcctccacga atacgaccga
     2221 cgcccggtcg cccccggact ctcccgtctg gaccggggcc gagccttcct ggcggcgcgc
     2281 tacgacgccg ggctgggcgc tctggactac ccggtcgccg acggaggtcg aggcctggac
     2341 cgtcgcttcg tcgacgtcta ccgccaggag gccgaaggcc ggaccaccga tgacggtggt
     2401 tctggattca gcatcggcct ggacatgtgc ctacccacca tccgcgacca cggaagccct
     2461 gaactacgcc aacggttcct cggccccggg ctccggggcg acgagcactg gtgccagctc
     2521 tattccgagc cgggtgccgg atcggaccta gctggcctga ccacccgtgc ggtccgcgac
     2581 ggtgacgaat ggctggtcac cggtcagaag gtatggacct cgggtgccga ccacgccgac
     2641 ttcggcatcc tgctggctcg gaccgactgg gacgtcccca agcacaccgg catctccatg
     2701 ctggtacttc caatgcgcca accgggcgtg gtggtccggg ccctccacca gatgacggac
     2761 gtggcccact tcaacgaagt cttcatggac gaggcccggg tccccgtcga ctgggtcgtc
     2821 gggggcccgg gaaacggctg gaagatggct gtcgctctcc tcgcgtacga acgttcctcg
     2881 ctcggcaagg gaagcgggcg ccagcccatt ccaaccgacc ggctcatcga actggcccag
     2941 gccaacgggc gatcccaaga tcctgtcgtg cgtcagaatc tggcccgtct ggccaccggg
     3001 acgaggctca tcgaatggct gaacctccgc acgggaatcc atccatcgat cacaaagctc
     3061 tggcggaccc agcagggaca cacggcggcc catgtggccg ccgggctggc ctggcccgga
     3121 ggtatcgcct gggacggctc tcggatgggc accacccaaa cgggccgatt cgccgacgcc
     3181 gatggctcgc actgggccta tgggatctgc gactcacctg ccctctcgct ggccggaggt
     3241 accgacgaga tccagaagaa caccctcggc gaacgggtcc tcggccttcc ccgggagccg
     3301 gccggcaacc gtgatacccc gttcagtcag ataccgaaga acgtctgaac ggctcccgtt
     3361 ccccacgggc tgccgtaccc gggtctagac cgagcgacaa cgaccggagg atcaacgcca
     3421 gtcgttcctc cacctcttca gcgaggagcg gatcctcgcc acccctggcg atccacggat
     3481 ccattgtcgt agcaaagagg cagcgggcga gatggaacac cgtggcaatg cccacgtcga
     3541 cccggacctc cgtctcatcc tcgccagtcc gcgtctcgag ggtctgctct acagccacat
     3601 ccagcgtggg atgggtcacg tgggtgcggt cggcttcacc ggacaacgac gcgtaggcca
     3661 cggcccggac gaattctggt gcccgcagga gagaaaacgg ttccacccga cccgaggtat
     3721 ccaactcctc cacagcggca taagactccg tgagacgatc gaaccccgca cggagcagag
     3781 cctccttccc gccgaagtag tgatggacca agccgtagtt gacaccggcc tcctcagcga
     3841 gagctcgccc ggagatccgc ttaggtgccg aatggcctag gagacgggcc gcggcggcca
     3901 ccagcgcctc tcggacctcg tcggcaccct tgggggaaga accgccggtg gtcatcgctc
     3961 gacctccacc ccgatcgacc ggtacagcga ttcgagcacg gtgaaaaacc ggtcccggat
     4021 cacctcaccg tccgcttcga ggtccaagcc aagccccgtg gcgttgtgtt cgacgaacac
     4081 cggccaaccc aactggagca agacgatggc tgccacggtg gcccggtggt ggacggggtc
     4141 gccgtcctgg tcgccctcgg tggccatccc gagcatggcg tcaaagaccg ggtgcgaaac
     4201 gtcctcgtcg tcgtacccac cctcaagggc gacgtgagca gcaaagccga agatctcccg
     4261 gtctgagacg acctggttca atggaatggg tcgggtgccg cccgccattg aatcggccag
     4321 aagccgggaa ccatgccgac ctcgggcggc tctgagcagg tcgccggacg actcgaagta
     4381 gtagtggact aggccgtagt tgacctcagc ctcttcggcc agtgcccgac cggtgaccgt
     4441 cgacggggga cgctccgaca tcaaccggat ggccgcatcg agcagcgccg tccgggagga
     4501 cggttccccg tcgggatcga cgcccatcaa gtccgcgccg gccgaagttg gccggccgcg
     4561 gcgaggaggg cggctccccg atcgatgcga tccgcactgg tgaccacatc ggcgaccatg
     4621 ccggcggtgt gctccttcat catccggccc gccgatccgg ggaatccggc gatctcgagt
     4681 gccagccttc gggctgcgtc gaggacctcg tcgtcagcca ccacgtcgag ggcgatccct
     4741 agacgatgca agtccagacc gctgaaccga cggccggaaa gggtgatctg atggatcacg
     4801 gagagaggat gtcggcccga cagccaggcc aggttcatgg cggccggcat gccctgacgg
     4861 acctcgccga cttgaaggaa cgccccctcg ccggccacca gaaggtcaca ggccagggca
     4921 agccccgctc caccgttgat ggcaaaccgt tccagcgcgc ccacgaccgg gaccggacac
     4981 tcggcaatgg cccggtgggc agcagcgaac gacgaactcg ccgtcccgat ccaggtcggc
     5041 ggcggatcag cgttgtactc cgtcaggtcg aggcccgaac agaacccacc gccagcgccg
     5101 tgtaggagga cggccccaac gtcatcccgg tcggaggcct cggcaaagca ggcggccaga
     5161 gcatcggaca acggtccgac tatggcgttc ttcctccccg gtcgattcag gacaatggtg
     5221 gccaacccgt ccttgacctc gaggagaacg gggttgtcgg gcgtgtggtc atcgactttg
     5281 tgatgggtca tgatgtcctc gatcggtcag gcgctgtcag tggtttcggt aacaagcgcg
     5341 tgctgaggtt agccatatgg ctaacctcag gcaaccggcc atcctgatct cctcacgacc
     5401 gaaaccgaca tcctcaatct ggacttcaat gcccacctag accgcatccg acgcttcact
     5461 gacgaggagt tgagcaccgg tgaagtgggc atggtggaac tcggcgaggt gccgccgccg
     5521 ctggttgacc accaggccaa gacggacctg ttcggcatca ccttgccccg ggagtggggt
     5581 ggcttgggtt gaaccatgga acagcaggtc cgccacctca tcgtcatgtc atcccgttca
     5641 tgaagtcagg tcagggcccc cacgatggtt gccagaccac caagaccaca gatccccagg
     5701 agcaccggtc ggaaccactc gctgtccacc catcggcgaa ccggaggtgc caacaccaga
     5761 ccgatgacgg cggaacccat gacgagcgcg atccgcccca cctcggcgcc gtcgatcgcc
     5821 ccaccgacca acaggcgcac ggtcaccacg gcgctcagca ccatgacgaa acccgcgagg
     5881 ttgggcctca ggacctgggg agggtcatcg tggtggagga tggcgtaggg cggtcccgga
     5941 agggcggcca cccgaagcgt gaacgccgtc agcacgccgg ccagcaccga catccatcgt
     6001 cggctcgggg gtttccaacc ggaccccact gccaccaccg acagcacgac cagcaccccc
     6061 acagccagcg tcagaccccg ctccgagagg ccggccagcg ccagctcgcc caagaccagt
     6121 ccgaccggtg cccccagaag gcacttccgc catcgctttg catcgaaacc cgagaactcc
     6181 atcgtgacat tgcggatacc gacgaccgtt ccacccagga tgaggggaag gggaacgaac
     6241 gccggatcca cggccatgag caccgggctg gcgaccaggg caatgccgat gcccgccgag
     6301 gcctggacga gggaacccgc agcgacggcg accaccacga ggacgatctc gatcggagtc
     6361 actgatcgac cctaacccga accggcggat ggttagccaa gcggctaacc tcctaatctt
     6421 tccctaatcg aaccctgacc accaccggag ccccatgcgt gccgccgtcc tccacgaagc
     6481 ccccggcgac ctcgtcgtcg aagatctgac catcgccaag ccgattggcc gcgaggttct
     6541 gatccgaacg aaggcgtcag gcctctgcca cagcgacctc cacgtgatcg aggggctgct
     6601 cccgctaccg tcgctgcccg cggcgcttgg ccacgaggcc tcgggcatcg tggaagcggt
     6661 cggacctgac gtgacggcct tcgctccagg cgaccacgta atcacctgtc tgactcagtt
     6721 ctgcggcgtg tgccccgagt gtcacgtggg tcgcgtgttc atctgctcga accgtcacga
     6781 cctagcccgc gggcccgaac tggaaccgac actgtcgctt gacggcactc cagtgctccc
     6841 catggccggg ctcggggcgt tcgccgagca gatattggtg cacgagaatg gcgtggtcgc
     6901 cgtcgacccg gccgtgccct tcgacgtggc cgccctcatc ggctgtgccg tgatgaccgg
     6961 tgtgggctca gccaccaacg gcgcgcagat ccgtccgggc gaaacggtgg ccgttatcgg
     7021 ctgcggaggc attggtctga acatcgtgca gggttgtcgg ctggccggcg ccagtcggat
     7081 tatcgcggtg gacctcaacg ccgagaagct cgaagcggcc cgcgggttcg gagcaaccga
     7141 cgtggtcgat gcctcgacgg acgacccggt cgctgcggta caggccctga ctggcggcgg
     7201 agtcgatgca gcctttgagg ccatcggact gacggcgacc ggcgaacagg cgctggccat
     7261 gatccgccca gggcgcaccg cctacctggt cggagtcccg ccaatcacca gcaccatgac
     7321 cgtgcccgga gcgctcatgg tgctccaggc caagggactt aggggcctgt tcatgggcaa
     7381 ctccaacttc aaggtggaga tgcccaatct ggcccgccac tacctggaag gtcgtcttga
     7441 actggaccga ctggtctcgg cccacatcac cctcgacgag gtgaacgacg gctacaccga
     7501 gctcaaggcg ggagccacct tgcgttccgt catcatgttc gactgagatc cggaaccacc
     7561 gggccgctca ggagccagca accagcgcgg ggaacagcct ggacaggtcg gccaggcagt
     7621 cgatgacgtg gtcggcctca gcaccatctt ccagatcgtc cagcgccccc cgaaaccgca
     7681 ctgttcccat gcccatggcg cgggccccag ctacatcggt ccgcttcaga tcgcccacgt
     7741 ggacgatggt cgttgggtcg tcgatgccca ggccgtccat ggcggcccgg aagatggccg
     7801 ggtcgggctt gtagacgcct acctcatcgg agaaggcggc gaacgccacg tgctccaaaa
     7861 tgccgtgttc ggcgaggtac gtcctcaaat gccgccctat ggccagattc gtgtccgaga
     7921 tgatcccgac ggctacaccg cttctcgcca cggcggacaa gacgtccgcc gcgtccggca
     7981 ccgacatcac ccgtagttgg tacgacgcga aatcaaacgc ggcggcgagg gcctggcgat
     8041 ctccaccttc cagccgatca ccgaatgcga cgaagcactc atcgagcgca cgctccggtc
     8101 cgtagtgcct acccgctcgc cactcggtct caaaccggtc gggcagtatc gacagcaccc
     8161 cccacagaag ctcggccggg atatcgagct ttcgctcgtc gatgacctcc tgccagtgcc
     8221 gacgacggat ctccagaccc ccggggacgc tagtgaggag ggtgttccag aggtcgaagg
     8281 tgacggcgcg gatcagcacg atcaggggaa ctggttggtt cggggcccag gcgtggtcaa
     8341 gtccggcaga ccccgtcggc gaccgccgcg gcggccacgg cctcggcaac ccggtagggc
     8401 accgacttgt caaacaccga cggcaccacg aacgagggct tcaggtcggc ttccgacacc
     8461 gagtcggcaa tggcccgggc ggcggccagc ttcatgttct cggtgatgtc ggtggcgcct
     8521 acatccaacg ctccacggaa gatcccgggg aaggccagca cgttgttgat ctggttcgga
     8581 tagtcacttc gccccgtggc catcaccgcg gcgagcccgt cggcctcctc tggatggatc
     8641 tcaggctcgg ggttggccat ggcgaacacg atcggatcgg gattcatggt ccgcaggtcg
     8701 gcagcgtcga tcaggccggg gccactcaca ccaacgaaca cgtcggtgcc gaccagcaca
     8761 tccttcaagc ttcccatctt ccgatcagga ttggtgtggt cggcgaacca ctccttggca
     8821 acgttcaggt tgtcgcgccc cgagtagacg gcacccatcc ggtccacccc gacgatctcg
     8881 cccacccccg cgttcagcaa gatcttgccc accgctaccc cagcggctcc catgccggcg
     8941 atcaccaccg acaggtcgcc catgtcgcgg ccggtaagtc ggcaggcatt ccacagggcg
     9001 gccagggtga ccacggccgt gccgtgctga tcgtcatgga acaccgggat gtccagggcg
     9061 gtccgtaggg cctcctccac gtggaaagcg gcaggagccg cgatgtcctc caggttgatg
     9121 ccaccaaagg tgggggccaa ccgaatcact gtgtcgatga tctcctgcgg gtcggtgacg
     9181 tccaggcaga tcgggaacgc gtcgacgccc gcgaactcct taaacagcag tgccttgccc
     9241 tccatg
//
LOCUS       DASCMR010000311         1542 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001500223, whole genome shotgun sequence.
ACCESSION   DASCMR010000311 DASCMR010000000
VERSION     DASCMR010000311.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1542)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1542)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1542
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001500223"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(15..872)
                     /locus_tag="QGG16_07340"
     CDS             complement(15..872)
                     /locus_tag="QGG16_07340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HJP25124.1"
                     /translation="MGIQRVAVVGGGQMGGGVAELTAKAGLSTVIKEVSAEAAERSEV
                     GIRRSLDRALERGKLDEAAHAAALANLTFTTDYEDLADADLVVEAVVESFDLKAEIFA
                     ALDEAVTSPDAVLASNTSSIPIIDIAMATGRPEQVIGLHFFNPAPVMKLVEVIPSVRT
                     NEAVTASMTAFATDVLDKVVVAAKDRAGFVVNMLLVPYLNAAMRMYADGHATAADIDN
                     GMKLGAAHPMGPLELSDMIGLDTMMLVAETLFAEYGDDFYQPPPLLRRMVAAGHLGRK
                     TGRGFDDYG"
     gene            complement(872..1429)
                     /locus_tag="QGG16_07345"
     CDS             complement(872..1429)
                     /locus_tag="QGG16_07345"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_function: GO:0016018 - cyclosporin A binding [Evidence
                     IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HJP25125.1"
                     /translation="MSELIPEADGSSERRTSFPAAPPMVIDTEKTYTAEMVTSMGSMT
                     IHLDPIAAPQTVNNFVYLARWHYFDGLIFHRVINGFVIQGGCPEGSGRGGPGYRFADE
                     LPKPGRYEIGSLVMANAGPDTNGSQFFVVTGPSGVGLPPAYALFGKVIKGVEVATAIQ
                     EVATGPGDRPTADVVIESVTVTEAE"
BASE COUNT          272 a          522 c          481 g          267 t
ORIGIN      
        1 ccgactgaac cgcgtcagcc gtagtcgtcg aagccgcgac cggtcttgcg gcccagatgc
       61 cccgcggcga ccatacgacg cagaagcggg ggcggctggt aaaagtcgtc gccgtactca
      121 gcgaacagcg tctcggccac cagcatcatg gtgtccaggc caatcatgtc gctgagttcc
      181 agcggaccca tcggatgggc ggcacccaac ttcataccat tgtcgatgtc ggcggccgtg
      241 gcgtggccgt cggcatacat ccgcatcgcg gcattcaagt acggcacgag caacatgttg
      301 accacgaagc ccgcccggtc cttggcggcc accacgacct tgtccagcac gtcggtggcg
      361 aacgccgtca tcgacgctgt caccgcctcg ttggtccgca ccgacgggat gacctcgacc
      421 agcttcatca ccggcgccgg gttgaagaag tggaggccga ttacctgttc cggccgtccg
      481 gtagccatgg cgatgtcgat gatcggaatc gacgacgtgt tgctggccag cacggcatcc
      541 ggtgaggtga ccgcctcgtc caatgcggcg aagatctccg cctttaggtc gaacgactcg
      601 accaccgcct caaccaccaa gtcggcgtcg gctaggtctt cgtagtcagt ggtgaaggtg
      661 aggttggcca gcgccgctgc gtgggccgcc tcgtcgagct ttccccgctc caaggctcgg
      721 tccaaggaac gtcggatccc gacctcgctg cgctcggcgg cctcggcgga cacctccttg
      781 atcactgtgg agagtcccgc cttggctgtg agctcggcca caccaccgcc catctggcca
      841 ccgccaacca cagcgactcg ctgaatgccc atcactcggc ctcggtcacg gtcacggact
      901 cgatcactac gtcggccgtc ggcctatcgc cgggcccagt ggccacctcc tggatggcgg
      961 tcgccacctc gacgcccttg atcaccttgc cgaacagcgc ataggcgggc ggcaggccga
     1021 caccgctcgg accagtaacg acgaagaatt ggctgccgtt ggtgtccgga ccggcgttgg
     1081 ccatgaccaa cgaaccgatc tcgtagcgac cgggcttggg tagctcgtcg gcgaagcggt
     1141 agccagggcc gccgcgaccc gaaccctcgg ggcaaccacc ctggatcacg aacccgttga
     1201 tgacccggtg gaagatcagc ccatcgaagt agtgccagcg cgctaggtac acgaagttgt
     1261 tgaccgtctg gggggcggcg atgggatcca agtggatggt catcgagccc atggaggtga
     1321 ccatctcggc ggtgtaggtc ttttccgtgt cgatgaccat cggcggggcc gccggaaagc
     1381 tggtccgccg ctcgctagaa ccgtcggctt caggaatcag ttcagacatt gggcctcctc
     1441 ggcctacggg ttgctcttca tcggcactga accggtgtgc aggctacggc gacccagcct
     1501 ttcctccgac cagccacggc atcacccagt gacgcgcggg cc
//
LOCUS       DASCMR010000312         5892 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001502089, whole genome shotgun sequence.
ACCESSION   DASCMR010000312 DASCMR010000000
VERSION     DASCMR010000312.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5892)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5892)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5892
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001502089"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..724)
                     /locus_tag="QGG16_07350"
     CDS             complement(<1..724)
                     /locus_tag="QGG16_07350"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HJP25126.1"
                     /translation="MHDPAGLGFDPDRLQRVADFAGAFVDDGRMVGTDVLVARHGQVV
                     LRSTAGLADREHAVPVADDNLWRIFSMTKPVTSVAIMQLIEEGRVRLRDPLSRFLPAF
                     AEMTVFAGGTVEAPETVPAERSITIADLLTHTSGLSYSILNQHPVDELYRRAGIDALD
                     RGGSLADRIDLLATLPLRHQPGTRWSYSMATDVLGLVVEAVDGRPFDEALHARILEPL
                     GMVDTIFRVSDDRLGRMTSCYAF"
     gene            complement(771..1100)
                     /locus_tag="QGG16_07355"
     CDS             complement(771..1100)
                     /locus_tag="QGG16_07355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25127.1"
                     /translation="MGQPITVVVKPSSRAGVVRYETNRALTGMGHERFRAGDEISGGT
                     PTDELARRLFARGGIAGVHVNGNVVTVEFADAGADGVEDIIAGLYLYWVEGVEVPSDD
                     ELTGAVG"
     gene            complement(1112..1531)
                     /locus_tag="QGG16_07360"
     CDS             complement(1112..1531)
                     /locus_tag="QGG16_07360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25128.1"
                     /translation="MRGTVRLLWLTLAWTAIVWVGRIRNVVGDDELTAGAQTWQIVVA
                     LIFLALGALVATVPLGLWHRRPLGSTRLVAMFCLWTIVFWTVRGGGMVFGDHEVGFKV
                     VHTVLALVSIALAGALYRADRDLVGEPSADPVMGVDR"
     gene            complement(1552..2244)
                     /locus_tag="QGG16_07365"
     CDS             complement(1552..2244)
                     /locus_tag="QGG16_07365"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HJP25129.1"
                     /translation="MAGRTRMRAALRGKAPGLKAEKELWADGYAVVAGMDEVGKGSWA
                     GPLTVGAVVVNTDRRITGVRDSKMLTEPERELLVDRITGWATAWSVGHASNDECDELG
                     MSTAQRLAARRALDNLGVEVDQVLLDGNWDFVGGGRARTIVRGDATSLSIAAASVVAK
                     VTRDRIMRGAEARFPGYGFAASKGYPSPVHREALAERGATTFHRRSWSFMDGLPEVGE
                     PARGRAGVARLF"
     gene            complement(2298..3728)
                     /locus_tag="QGG16_07370"
     CDS             complement(2298..3728)
                     /locus_tag="QGG16_07370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25130.1"
                     /translation="MAVVDSRATVQPLGDGDGNGWQVEWWIGADDRWYAPEVEAAVRQ
                     VRLGAAPVLETRMRVSGGDIVATTWAAQADGSAGPAVVVELANETPVPVAVAVTVQAS
                     AGGWIRRLSVDGRRLMADGAAAVVVDRDPGRFSLVDAGGDLWAEVTGGRAVEQAPDPV
                     RCRIGAAAGALVVPLPHRTALRFAVPAGDLVDNPSAVLPAVERVVAAWASRLEMAATA
                     DVPEGFDAQRALVDLLLAEPSASVVVELARWGFGEEAAQRLQSGWPDSGADRLRAAAA
                     LWDLTRDPALFTRALVGVPLADGLDGIIRAGGDGSEARRAVGALAGLFESLGDHTAAA
                     DAASLGEMASPVEDAPLAVDAGPAAELRMLADRLVRRTTDGLDLLVDVPDAWLGQPVE
                     VLGLATPVGRLGFAVRWHGERPALLWELEAHPCPGPEVGPVVLRVPGLDRAFSSTGAT
                     GEVLLAAPAGRIPPRNSIPAEGGSFT"
     gene            complement(3839..4915)
                     /locus_tag="QGG16_07375"
     CDS             complement(3839..4915)
                     /locus_tag="QGG16_07375"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0047952 - glycerol-3-phosphate
                     dehydrogenase [NAD(P)+] activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0046167 - glycerol-3-phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HJP25131.1"
                     /translation="MTPSSPADALGLEPAARPVERVVVIGAGSWGTTVAALLAPVVST
                     VLWSRRSEVAADVAAGRGNRRYLGGHDLPRELEATDDLLGAVSGADLVVAGVPTHGFR
                     STLVRAAPALGADVPVISLAKGFEQGTGLRMTQVAAEVLPGRPVGVLTGPNLAREILE
                     GRSAATVVAATDPSAAVTLQGLLASDRLRVYTNDDLVGCEIGGAVKNVIALAAGMAEG
                     LDTGDNARAALITRGLAEMSRLGVALGADFQTLAGLAGLGDALATCMSGQSRNRWVGE
                     QVGRGASPDEVLAGMDQVAEGVRAAGVVCQLAGEVNVEVPIAAGVHSVFEEGRSPGEV
                     WADLMARRPAAEIEPPESGDANFS"
     gene            4938..5525
                     /gene="cofC"
                     /locus_tag="QGG16_07380"
     CDS             4938..5525
                     /gene="cofC"
                     /locus_tag="QGG16_07380"
                     /EC_number="2.7.7.68"
                     /inference="COORDINATES: protein motif:HMM:TIGR03552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043814 - phospholactate
                     guanylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-phospho-L-lactate guanylyltransferase"
                     /protein_id="HJP25132.1"
                     /translation="MSGPIGVLIPVKAFTDAKGRLAGAVDANGRADLARAMATTVVAA
                     AAPLPVTVVCDDDGVDAWARSVGAAVIRVHGPGLNRAVEAGVAALAADGVPQVVIAHA
                     DLPRATRLDHCAATQGITLVPDRNLDGTPVLSVPTDAGFRFAYGPGSYAAHVAEAERL
                     GLPWRSLHDPDLAFDVDDPADLEGLDGLLGFQPAD"
     gene            complement(5522..>5892)
                     /locus_tag="QGG16_07385"
     CDS             complement(5522..>5892)
                     /locus_tag="QGG16_07385"
                     /inference="COORDINATES: protein motif:HMM:NF013245.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP25133.1"
                     /translation="SFAMLGLALAAVAPSGQSSPALAQATMLPMAFVSDVFVPLGDDP
                     TRWLQVVGDVLPLKAFVEAFFTPFDPYHSGSGWEPALLLRMACWGVFGALVAARRFRW
                     EPSVGSGRSRRSRRNTPVDG"
BASE COUNT         1052 a         2181 c         1890 g          769 t
ORIGIN      
        1 cgaacgcata gcacgacgtc attcggccca gccgatcatc agacacccgg aagatggtgt
       61 cgaccatgcc cagcggttcg agtatccggg catgcaacgc ctcgtcgaac ggtcgtccat
      121 cgacggcttc cacgaccaga cccagaacgt cggtggccat cgaatacgac caccgggtcc
      181 ccggctggtg ccgcagcggc agcgtggcca gcaggtcgat ccgatcggcg agggagccac
      241 cccgatccag ggcgtcgatc ccggcccgac ggtacaactc atccaccggg tgctggttga
      301 ggatcgagta gctcaggccg gaggtgtggg tgagcaggtc ggcgatcgtg atggatcgtt
      361 cggcgggcac cgtctcgggg gcctccaccg tccccccggc aaacaccgtc atctcggcaa
      421 aggcggggag gaaccgcgac agcgggtccc ggaggcggac gcgaccctcc tcaatcaact
      481 gcatgatggc caccgaagta acgggcttgg tcatcgaaaa gatgcgccac aggttgtcgt
      541 cggcgaccgg tacggcatgc tcgcggtcag ccagaccggc cgtggatcgc aggaccacct
      601 gcccgtggcg ggcaaccagc acgtcggtac cgaccatgcg accgtcgtcc acgaaggcgc
      661 cagcgaagtc agccacccgc tgtagccggt caggatcgaa ccccagaccg gcggggtcgt
      721 gcatttcgag gctcgagacg tgccccatgt cggatctcaa cggggctgga tcagcccacg
      781 gcgccggtca actcgtcgtc gctcggcacc tcgacaccct ccacccagta caggtaaagg
      841 ccggcgatga tgtcctcgac accgtcggcg cctgcgtcgg cgaactcaac cgtcacgacg
      901 ttgccgttca catgtacacc ggcgatgccg ccgcgggcga acagccggcg ggccaactcg
      961 tcagtgggcg tacctccgga aatctcgtca ccggcacgga agcgctcgtg acccataccg
     1021 gtgagggcac ggttggtctc gtaccggacg accccggctc gggacgatgg cttgacaacg
     1081 acggtgatcg gctgacccat ggctgggcag gctagcggtc gacgcccatc acagggtcgg
     1141 cggacggctc cccgaccagg tcccggtccg cccggtagag ggcgccagcc agagcgatgg
     1201 aaactagggc cagcacggtg tgaaccacct tgaagccgac ctcatggtca ccgaatacca
     1261 tgccgccacc gcgcaccgtc caaaagacga tggtccacag gcaaaacatc gccaccagac
     1321 gggtcgaccc gagcgggcgg cggtgccaga gcccgagggg gacggtggcc accagagcgc
     1381 ccagcgcgag gaagatcagg gccaccacga tctgccaggt ttgagccccg gcggtcagct
     1441 cgtcgtcgcc gaccacgttg cggatacggc ccacccagac aatggctgtc cacgccaagg
     1501 tcaaccagag gagtcgcacg gttccacgca tggccaaaac ggtaccggcg gtcagaacag
     1561 acgggccacc ccagcccggc cccgggccgg ttcacccacc tcgggcagac cgtccataaa
     1621 cgaccaggac cgacgatgaa acgtcgtggc accacgttcg gccagagcct cacgatgaac
     1681 gggactggga taacccttgg acgccgcgaa cccataaccc gggaagcggg cctcggcgcc
     1741 ccgcatgatc cgatcccggg tgaccttggc cactacggag gccgcggcga tcgaaaggct
     1801 ggtggcgtca cccctcacga tggtccgggc ccgtcctcca cctacgaaat cccagttgcc
     1861 gtccaggagc acctggtcga cctccacgcc gaggttgtcc aacgcccgcc gggccgccag
     1921 gcgttgggca gtcgacatcc ccagctcatc gcactcgtcg ttactggcgt ggccaaccga
     1981 ccaggcggtg gcccatccgg tgatgcgatc cacgagtagt tcacgttccg gttcggtaag
     2041 catcttggag tcacggaccc cggttatacg gcggtccgtg ttgacgacga cagcccccac
     2101 ggtcagcggg ccggcccacg agcccttgcc cacctcgtcc atgccggcta ccacggcgta
     2161 gccgtcggcc cacagttcct tctcggcctt caggccgggg gccttccccc gcaacgcggc
     2221 gcgcattcgg gtccgtccgg ccatgccctg accctatgag cccggcccca tgagcccgag
     2281 aatgcgaagt cggaaaatca ggtgaacgaa ccaccctcgg caggaatgct gttccgggga
     2341 ggaatccggc cggccggcgc ggccaacaac acctctccgg tggcaccggt gctagagaac
     2401 gcccgatcca gacccggcac ccgaagcacc accggaccga cttcggggcc cgggcacggg
     2461 tgggcctcaa gctcccacag aagggccgga cgttccccat gccaccgcac ggcgaacccc
     2521 agtcgaccga cgggggtggc cagaccgagg acctcgacag gctgacccaa ccaggcatcg
     2581 ggcacgtcga ccaacaggtc caggccgtct gtggtgcgtc gcaccaggcg gtcagcgagc
     2641 atccggagtt cggcggccgg gcccgcgtcg accgctagcg gggcgtcctc aaccggggac
     2701 gccatctcgc cgagagaggc agcgtcggca gcagccgtgt ggtcaccgag cgactcgaac
     2761 agccccgcga gggcccctac ggcccggcgg gcttcggagc cgtctccacc ggctcggata
     2821 atcccgtcca acccatcggc gagcggtact ccgactagcg cgcgtgtgaa caacgccgga
     2881 tcacgggtca ggtcccacag ggcggcagcg gcacgaagtc ggtcggcacc cgaatccggc
     2941 caacccgact gcaaccgttg ggccgcctcc tcgccgaatc cccaacgggc caactcaacg
     3001 accacggagg ctgacggttc ggccagtagg aggtccacca aagcccgctg cgcatcaaaa
     3061 ccctcgggca catcggcggt ggccgccatc tctagtcggg acgcccaggc ggcaaccacc
     3121 cgctcgacag ccggcagcac agccgatggg ttgtccacca gatccccggc cggcaccgcg
     3181 aaccgcaacg ccgtccgatg cgggaggggt acgacaaggg cgccggccgc cgcgccgatc
     3241 cgacaacgga ccgggtccgg cgcctgttcg accgcccggc ctccggtcac ctcggcccac
     3301 aggtccccgc cggcatccac cagtgagaac cggcccggat cccggtcgac caccacggcg
     3361 gcggctccgt cggccatgag tcgacgaccg tccacggaca gtcgtcggat ccagccgccc
     3421 gccgaggcct ggacggtgac cgccacggcc accggcacgg gcgtctcatt ggccagttcc
     3481 acaaccaccg ccggcccagc cgagccatcg gcctgggcag cccacgtggt ggccacgatg
     3541 tctccacccg acacccgcat ccgtgtctcc agtaccggtg ccgccccgag cctgacctga
     3601 cggaccgctg cctccacctc cggggcgtac cagcggtcat ccgctccaat ccaccattcg
     3661 acctgccatc cgttgccatc cccatcaccg agaggctgga cggtggcccg tgaatcgacc
     3721 accgccaacg ggccgtccca cgtgccgacc cgcgtcccgg ccagtccggg tgacccatca
     3781 gcgggccgga cgcgccagaa cgccagacgt gaggtgaggc ccgtcctagg agaacctgtc
     3841 atgagaaatt cgcgtcaccg ctctcgggtg gttcgatctc ggcggccggt cggcgggcca
     3901 tcaggtccgc ccagacctcg cccggcgatc ggccctcctc gaacacgctg tggacacccg
     3961 cggcaatcgg gacctcgacg ttgacctcgc cggccaactg gcagaccact ccagccgccc
     4021 ggacgccctc ggccacctga tccatgccgg caagtacctc atcgggagat gcgcctcgac
     4081 ccacctgctc gccgacccat cggttgcgac tctggccgct catgcaggta gccagggcat
     4141 cacccagccc agccagaccg gccaacgtct ggaagtcggc cccgagggcc acccccagtc
     4201 ggctcatctc ggccagtccc cgggtgatga gagcggcccg tgcgttgtcg ccggtgtcga
     4261 gcccctcggc catgccggcc gccagggcga tcacgttctt aactgcgcca ccgatttcac
     4321 aacccaccag atcgtcgttg gtgtagaccc gtaaacggtc cgaagccagc agaccctgga
     4381 gagtcacggc ggccgacgga tcggtggcgg ccaccacggt ggccgcagac cgtccctcga
     4441 ggatctcccg agccaggttc ggcccggtca gcactccgac cggtcggccg ggcagcacct
     4501 cggcggccac ctgggtcata cgaaggccgg ttccctgctc gaagcccttg gccagactga
     4561 tcaccggcac gtccgcgccg agggcaggcg ccgctctgac gagggtggac cggaagccgt
     4621 gggtgggcac gccagccacc accagatcgg cacctgacac cgcgccgagc aggtcgtcgg
     4681 tggcctccaa ctcacgaggc agatcgtggc ccccgaggta gcggcggttt ccccgcccgg
     4741 cggccacgtc agcggccacc tccgatcgtc gcgaccagag cacggtcgac actacgggcg
     4801 ccaagagagc ggccactgtg gtcccccagg acccggcacc gatgacgacc accctctcca
     4861 cgggccgagc cgcgggctcg aggccgagcg cgtcggccgg agatgagggc gtcatggcgt
     4921 caccctaggg tgtcgcaatg tccggaccca tcggcgtact gatccccgtg aaggccttca
     4981 ccgacgctaa gggccgcctt gccggagcgg tcgatgccaa tggtcgtgcc gacctggccc
     5041 gagccatggc gaccaccgtg gtcgccgcgg cggcacccct gccggtgacc gtggtctgcg
     5101 acgacgacgg ggtcgacgcc tgggcccgct cggtgggcgc cgcagtcatc cgggtccacg
     5161 ggccgggcct gaaccgggcc gtggaggccg gagtggctgc cctggccgcc gacggtgtgc
     5221 cacaggtcgt gatcgcccac gccgaccttc cccgggccac ccgactggac cactgtgcgg
     5281 ccactcaggg catcactctg gtgccggacc ggaatctcga tggcaccccg gtgctctcgg
     5341 tgcccaccga tgccggattc cgattcgcct acggaccggg ttcgtacgcc gcgcacgtgg
     5401 ccgaggctga acgcctgggg ttgccgtgga ggagcctgca cgaccccgac ctggccttcg
     5461 acgtcgacga cccggctgac ctcgagggtc tcgacgggct cctcggcttc caacctgcgg
     5521 actagccgtc gacgggcgtg tttcgacgtg accgacgcga ccggcctgaa cccaccgagg
     5581 gctcccaccg gaaccgacgg gcggccacca aggcgccgaa cactccccag caggccatcc
     5641 gcagcaacaa cgccggttcc caccccgaac cactgtggta cggatcgaac ggcgtgaaga
     5701 aggcctcgac gaaggccttg agcggaagca cgtcgccaac cacctgcaac caccgggtcg
     5761 gatcgtcacc cagaggcacg aacacgtctg acacgaaggc catcggcagc atggtggcct
     5821 gagccaacgc cggcgaactc tgacccgacg gggcgacggc ggccagggcc aggccgagca
     5881 tggcgaacga gg
//
LOCUS       DASCMR010000313         5083 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001520724, whole genome shotgun sequence.
ACCESSION   DASCMR010000313 DASCMR010000000
VERSION     DASCMR010000313.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5083)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5083)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5083
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001520724"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..346
                     /locus_tag="QGG16_07390"
     CDS             <1..346
                     /locus_tag="QGG16_07390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphohydrolase"
                     /protein_id="HJP25134.1"
                     /translation="LLHDVGDPIAPENHSAVAADILRPYVTDRTHWIIRHHGVFQGYY
                     YFHHLGADPDAREQFRDHQWFDDCAAFCADYDQNCFERNHDTMALEDFEPMVRALFAR
                     DSRFPLPSMTLA"
     gene            complement(369..1328)
                     /locus_tag="QGG16_07395"
     CDS             complement(369..1328)
                     /locus_tag="QGG16_07395"
                     /inference="COORDINATES: protein motif:HMM:NF019845.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HJP25135.1"
                     /translation="MFELVEVPEPEGDGVLVEVASAGICGSDLHMAGFGLPTTFGHEV
                     AGRTADGTAVAIRPTRTCGTCDRCLVGEVQQCRDMALYGLAVDGGMADRVIVDSSCLV
                     ALPEGLSVADACLVEPVAVSVHAVATADIVAGHRVLVVGGGTVGLTAAAVARAVGADV
                     DVSARHPHQQAAAERLGAGTEALGEYDVVVEAAGTEGALVTAIDHARPGGTVSLPGVY
                     WDGLALPNVMTMFLKEVRLVPSSMYGCARGVHAHGASEPGAVPGPDADPAGELRVAAR
                     LLTDVPDLAAAVVTHRFGLDEAAEAFRVAADRSAGAIKVVLEP"
     gene            1454..2677
                     /locus_tag="QGG16_07400"
     CDS             1454..2677
                     /locus_tag="QGG16_07400"
                     /inference="COORDINATES: protein motif:HMM:NF012296.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HJP25136.1"
                     /translation="MGIDLLDGDFYVTDPYPTYARLRDEDPLHRDETNGLWGVSRYDD
                     IVAIERDKATFSNAGDGSRGYRPNIPADRSIIGLDDPHHMLRRNVVSRRFTPRAVSRW
                     EDHVRETVTALIDDALADASADGTCRVEAINQLAAPLPAQMIGLLLGFGPEMWPKLQE
                     WSERTIALGGGPGYHDEAGVVAAMEFAGACAELYEAKRPTIIEGCPMDDVMSVWIDRE
                     RQGPKAMGGHAFGLHEIIPDCLLLLDGGAETTRTVIARTLVELAGRPDQWALLRDGAD
                     LTIAVEEFIRWVTPIHNMCRVATTDVEMHGHNIRSGDQLVLMYSSANRDPAHFDDPET
                     FDVTRYPNHHIAFGFGTHFCLGAALARLEIRSFFEEFVARVAEIRIAPGTTPVEMPNS
                     FVYGMSEAHLELRPA"
     gene            complement(2712..3563)
                     /locus_tag="QGG16_07405"
     CDS             complement(2712..3563)
                     /locus_tag="QGG16_07405"
                     /inference="COORDINATES: protein motif:HMM:NF024950.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJP25137.1"
                     /translation="MTDGALRGMGALVTGGGTGIGRACAEALAADGAVVTICGRTEDR
                     LVDAVDQIRTGHGGSVHHVVADVTSEDDVRAAVSAAAANAGNLRGVVANAGGGGGLRP
                     LHLQEVDGFEAVLRLNVVGTMLCLKHAVPEMVEAGGGSFVGMSSIAGHVTHPHFGAYP
                     VAKAGIEELMRNAADEFGASGVRCNAIRPGFIATELMDFVPRDSEVFASYVRNTPLAP
                     TLTTGVGEPSDVGALARFLIGPESRWITGTAINVDGGQGLRAGPDFSSFLAAMGDDVL
                     RGHRPAD"
     gene            complement(3560..4231)
                     /locus_tag="QGG16_07410"
     CDS             complement(3560..4231)
                     /locus_tag="QGG16_07410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3159 domain-containing protein"
                     /protein_id="HJP25138.1"
                     /translation="MPSPSEPVRPDPTRPDRNRVLDSVLPIALFIGLERAWGLAAGVA
                     GATLWSIKVVLGRRRRGEEVGRYLPILVAYLAVRAIVGIATDSDAVYFGIGIGTKAAV
                     GAALVGTVVVGRPFLVRYAHLAVPFDRATRDHPRYRQVMGHLTVALGCYQFLTSAWDI
                     WLFNQTSASGYVLIRFIVGWPIGTLASMVAIFWADRALRRVPGYPGILDLLAPPEDDD
                     EEEDA"
     gene            complement(4215..4715)
                     /locus_tag="QGG16_07415"
     CDS             complement(4215..4715)
                     /locus_tag="QGG16_07415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25139.1"
                     /translation="MAAPSYVPQPVVRPTSWAYSGPRRRLGAWHADRPGEVVGGQPRG
                     ERLGHPGPDQGYALRLARGFTARLQLGYGEHAADVVAGCVGVALKRAALFGRAPMAGD
                     LELAFSIFGFLDEAPTGDQLDERRSLFAEVSHHHHYTEVRRIADRVPESVLWLGAAAA
                     RDAFTV"
     gene            complement(4734..>5083)
                     /locus_tag="QGG16_07420"
     CDS             complement(4734..>5083)
                     /locus_tag="QGG16_07420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25140.1"
                     /translation="DTAFFVARVPAGSRPVVDGREAVHAEWCRPADALERWKAGELTM
                     ISPTIAMFQRLASWRTVDEVLAATTDAPVRHVRILDDSTTPVRFEGDDDYDAPGTRAT
                     LGWVWLPAGPLGG"
BASE COUNT          894 a         1861 c         1589 g          739 t
ORIGIN      
        1 cctgctccac gacgtcggcg accccatcgc gccggagaac cacagcgcgg tggccgccga
       61 catcctccgg ccctacgtca ccgaccggac gcactggatc atccggcacc acggcgtgtt
      121 tcaggggtac tactacttcc atcatctggg tgccgacccc gatgcccggg agcagttccg
      181 ggaccaccag tggttcgacg actgcgcggc tttctgcgcc gactacgacc agaactgctt
      241 cgagcggaac cacgacacca tggcgctcga ggacttcgaa cccatggtgc gagccctgtt
      301 cgcccgcgac agccggtttc cactgccgtc catgactctc gcctgacgac cacgcccaga
      361 aaccactcct agggttcgag gaccaccttg atggcgccgg cggaacgatc ggcggccacc
      421 cggaatgcct cagcggcctc gtccaggccg aaccggtggg tcaccacggc agcagccagg
      481 tcgggcacat cggtcagcag gcgagccgcc acacgcaact cgccggccgg gtcggcatca
      541 ggccccggaa ctgctcccgg ttccgacgct ccatgggcgt gcaccccgcg ggcgcagccg
      601 tacatggacg acggcaccaa gcggacctcc ttgaggaaca tggtcatcac gttgggtagc
      661 gccagaccgt cccagtagac gccgggcagc gacacggttc ccccgggccg ggcgtggtcg
      721 atggccgtga ccagcgcccc ctcggtaccc gcggcttcca ccaccacgtc gtactccccc
      781 aatgcctccg tgcccgcccc caaacgttca gcggccgcct gctgatgggg gtggcgggct
      841 gagacgtcga catcggcacc cacggcccgg gccacagctg ccgcagtcag tcccactgtc
      901 ccacccccga cgaccagcac ccgatgcccg gccacgatgt ccgcggtggc caccgcgtgc
      961 accgacacgg ccaccggctc gaccaggcag gcatcggcca ccgagagccc ctcgggtagc
     1021 gccaccaagc acgacgaatc aacgatcaca cggtcggcca tgcccccgtc gacagccagc
     1081 ccgtagagcg ccatgtcgcg gcactgctga acctcaccga ctaggcatcg atcgcaggtt
     1141 ccacaggtcc gggtaggtcg aatagccacc gcggtgccgt cggcggtccg tcccgccacc
     1201 tcgtggccga acgtggtggg caggccgaag cccgccatat ggagatccga tccgcagatg
     1261 ccggccgagg ccacttcgac cagcactccg tcgccctcgg gctcaggcac ctccaccaac
     1321 tcgaacaccc caccaaccgt ccgtactcct cgcaccgcgc ctcctcgttc attcttctca
     1381 tcggaccatc tcggctgatg gttccctgcg ccccgacccc gagccgccac gtacccgacc
     1441 gtagggtcca atcatgggca tcgacctgct ggacggcgac ttctacgtca ccgacccgta
     1501 ccccacctac gctcggctcc gcgacgagga tccgctccac cgcgacgaaa ccaacggcct
     1561 gtggggcgtg tcgcgctatg acgacatagt ggccatcgaa cgcgacaagg ccaccttctc
     1621 caacgcgggc gacggctcca ggggctaccg gcccaacatc cccgccgacc gatcgatcat
     1681 cggcctagac gacccccacc acatgctgcg tcgaaacgta gtgtcgcgcc gcttcacccc
     1741 ccgggccgtc agccgctggg aagaccacgt acgcgaaaca gtcaccgcgc tgatcgacga
     1801 cgctctcgcc gatgccagcg cggacggcac ctgccgggtg gaggccatca accagttggc
     1861 cgctccactc cccgcccaga tgatcggtct gctactgggc ttcggacccg agatgtggcc
     1921 caagctccag gagtggtccg aacgcaccat cgccctgggc ggcggccctg gctaccacga
     1981 cgaggccggc gtcgtagccg ccatggagtt cgccggggcg tgtgccgagc tctacgaggc
     2041 caagcggccg acaatcatcg agggctgtcc gatggacgac gtcatgtcgg tctggatcga
     2101 ccgggaacgc caggggccca aggccatggg cggccacgcc ttcggccttc acgaaatcat
     2161 cccggactgc ctgctgctgt tggacggtgg cgccgagacc acccggacgg tcattgcccg
     2221 cacgctcgtt gagttggccg ggcgccccga ccagtgggcc ttgctacgtg acggtgccga
     2281 cctgaccatt gccgtggagg agttcatccg atgggtgacg cccatccaca acatgtgtcg
     2341 ggtggcgact actgacgtgg agatgcacgg ccacaacatc cggtccggcg accagctggt
     2401 cctcatgtac tcgtcggcca accgcgaccc ggctcacttc gacgacccgg agacgtttga
     2461 cgtgacccgc tatccaaacc accacattgc cttcggcttc ggcacccact tctgtctggg
     2521 cgccgctctg gcccgcctgg agatccgctc gttctttgag gagttcgtgg cccgggtggc
     2581 cgagatccgt atcgccccgg gcaccactcc tgtcgagatg cccaactcgt tcgtctacgg
     2641 gatgagcgaa gcccatctcg aactgaggcc cgcctgaccc ggctcgcttc tgggcagaaa
     2701 gctccggcga atcagtcagc aggtcgatgg ccgcgcaaga cgtcatcacc catcgctgcg
     2761 aggaacgacg agaagtcggg cccggcacgc aggccctgcc cgccgtcgac gttgatggcc
     2821 gtcccggtga tccaccgcga ctcggggccg atcaggaatc gggccagggc tcccacatcg
     2881 gacggctccc ccaccccggt cgtcaacgtt ggggccaagg gcgtgttgcg aacgtaggag
     2941 gcgaagacct cactgtcacg gggtacgaag tccatgagtt cggtggcgat gaacccgggc
     3001 cggatggcgt tgcaccgcac ccccgacgct ccgaactcgt cggccgcatt acgcatcagc
     3061 tcctcgatcc ccgccttggc taccggatag gcgccgaaat gcggatgagt gacgtgtccg
     3121 gcgatcgacg acatgccaac gaacgatccg cccccggctt ccaccatctc gggaaccgcg
     3181 tgcttcagac agagcatggt gccgaccacg ttgagtcgga gcacggcctc gaacccgtcg
     3241 acttcctgga ggtggagtgg gcgtagcccg ccaccgcccc cggcgtttgc caccacgccc
     3301 cggagattcc cggcattggc ggccgccgcc gacaccgccg cacgtacgtc atcctcggag
     3361 gtcacgtcgg ccaccacgtg atgcacgctt cccccgtgac cggtacgaat ctggtcgacg
     3421 gcgtcaacga ggcgatcctc ggtccgcccg cagatggtga cgacggctcc gtcggcagcc
     3481 agcgcctcgg cacaagcccg tccgataccc gtgccaccac ccgtgaccag tgcccccatg
     3541 ccacgaagcg ctccgtcagt catgcgtctt cctcctcgtc gtcgtcctcg ggcggagcca
     3601 gcaggtcgag gattcccggg tatccgggca cccgtcgaag agctcgatcg gcccagaaaa
     3661 tggcaaccat gctggccagc gtcccaatcg gccatcccac gatgaaccgg atcagcacgt
     3721 agccactggc cgacgtctgg ttgaacagcc agatgtccca ggccgacgtc aagaactggt
     3781 agcaacccag cgcgacagtg agatggccca tgacctgccg gtagcggggg tggtcccggg
     3841 tggcccggtc gaagggcacc gccaggtggg cgtagcggac caagaatgga cgaccgacca
     3901 ccacggtgcc gacgagtgct gccccgacgg ctgccttggt gccgatcccg atgccgaagt
     3961 acacggcgtc ggaatccgtg gcgatgccga caatggcgcg gaccgccaga taggccacga
     4021 ggatcggcag gtagcgaccg acctcttcgc cacgacggcg acgacccaac acgaccttga
     4081 tgctccacag cgtggcgccg gccaccccgg cagccagccc ccaggctcgt tccagcccga
     4141 tgaacagggc aataggcagg accgagtcga ggacccggtt gcggtcgggc cgggtgggat
     4201 ccggccggac cggttcagac ggtgaaggca tcgcgggcgg cggccgcgcc cagccacagc
     4261 acgctctcag gcactcggtc ggcgatccgc cggacctcgg tgtagtggtg gtggtgcgat
     4321 acctcagcga acaggctccg tcgttcgtcg agctggtcgc cggtgggtgc ctcgtcgagg
     4381 aacccgaaga tcgagaaggc cagctcgaga tcaccggcca tgggggcacg accgaacagc
     4441 gcggcccgct tcagcgcgac gccgacgcaa ccggcgacca cgtcagcggc atgctcgccg
     4501 taccccagtt ggaggcgggc agtgaagccc ctggccagac gaagggcgta gccctgatcg
     4561 gggcccgggt ggcccagacg ctcaccacgc ggttgacctc ccacgacctc acccggtcga
     4621 tcggcgtgcc acgcacctag gcgacggcgt ggtcccgaat aggcccaact ggtgggccgg
     4681 acgacgggct gggggacgta cgagggtgcg gccatggatt caggctacgg ggcctatccc
     4741 cccagagggc cggccggcag ccacacccag ccgagcgtcg ccctcgtacc cggagcgtca
     4801 tagtcgtcat cgccctcgaa gcggaccggg gtggtcgaat cgtcgagtat ccggacgtgt
     4861 cgaacgggtg cgtcagtcgt ggccgccagt acctcgtcga ccgtccgcca agaggccaag
     4921 cgttggaaca tggcgatcgt cggactgatc atcgtgagtt cgcccgcctt ccaacgctcc
     4981 agcgcgtcgg ccggtcggca ccactcggcg tgtacggcct cacggccatc gaccacaggt
     5041 cgggacccgg ccggcacccg ggccacgaag aacgccgtgt cat
//
LOCUS       DASCMR010000314         3511 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001524410, whole genome shotgun sequence.
ACCESSION   DASCMR010000314 DASCMR010000000
VERSION     DASCMR010000314.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3511)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3511)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3511
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001524410"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..229
                     /locus_tag="QGG16_07425"
     CDS             <1..229
                     /locus_tag="QGG16_07425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25141.1"
                     /translation="LTSPEPEGTGSGTNWWKPAVAVLAAGLLLLLVLRRRRCQHCEKR
                     LTDRDGVLVDEDDNYECSDNPDGDHHQLKRK"
     gene            complement(306..1142)
                     /gene="aroE"
                     /locus_tag="QGG16_07430"
     CDS             complement(306..1142)
                     /gene="aroE"
                     /locus_tag="QGG16_07430"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: protein motif:HMM:TIGR00507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004764 - shikimate 3-dehydrogenase
                     (NADP+) activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HJP25142.1"
                     /translation="MSGASRLAAVIGDPVRHSLSPTLLNAAFAEVGLDWHFVALEVAE
                     GRSDEALDAVRALGLAGLSVTMPHKAAVAAAVDHRTEQAEVLDAVNCVVVEGGRLVGH
                     NTDGDGFLDGLRHDTGFDPAGRSTVVIGAGGAARAVVLALARAGAAEVAVVNRTASRA
                     EVAAGLAGPVGRMVGSDELSDTVAAADLVVNATSVGMTDDGALPVDPESVAVGTVAVD
                     LIYHPPETAWLAALRGRGIEAHNGLSMLVFQAAHAFRLWTGSEAPVAVMDAAARAVLA
                     TR"
     gene            complement(1192..2259)
                     /gene="mltG"
                     /locus_tag="QGG16_07435"
     CDS             complement(1192..2259)
                     /gene="mltG"
                     /locus_tag="QGG16_07435"
                     /inference="COORDINATES: protein motif:HMM:TIGR00247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HJP25143.1"
                     /translation="MALVLLALVVGYRLFLGWVDDQMTPEALPGDEVEFSIVEGWSTN
                     DVVVSLGDAGVIDNPAMFRQWMRCPSAIRWLIGCESGIEYSFQAGDYVLREHLGFEAV
                     VALLDEGPIPEEVIRVTVPEGLTVEQTVQRLLREMPLFEEDELRASLVSDRLQWEHGS
                     TGHRERALEGLLFGDTYQLDEATVADELGLVLRMHQQFRRVVEQLDLVARSAEVGLTP
                     YEAVILASLIEEEALLDGDRPKISRVIHNRLAANWRLGIDASSRYAVGKTAGEPMTSE
                     DLSVVSLWNTRVVVGLPPTPIASPGRASLEAALAPDPGSWMYYVRTDEGGVSGAHTFA
                     TTASEFETARRVCVVKDLGCG"
     gene            complement(2379..2816)
                     /gene="ruvX"
                     /locus_tag="QGG16_07440"
     CDS             complement(2379..2816)
                     /gene="ruvX"
                     /locus_tag="QGG16_07440"
                     /inference="COORDINATES: protein motif:HMM:NF015607.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HJP25144.1"
                     /translation="MRALGLDLGSKRIGVAVSDSDGRVATPIEVVHRTGDRPGEHRTL
                     AGLAEEWGVEVVVVGIPYSLDGSVGPMAEAMAAEATLLAQVLGERPGVPVETYDERLT
                     TVTAERALREQDLRAPQRRKVVDMVAAAVMLQGWLDARREALG"
     gene            complement(2822..>3511)
                     /locus_tag="QGG16_07445"
     CDS             complement(2822..>3511)
                     /locus_tag="QGG16_07445"
                     /inference="COORDINATES: protein motif:HMM:NF014342.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHHA1 domain-containing protein"
                     /protein_id="HJP25145.1"
                     /translation="AIAFFGDKYGDTVRVLEAGPHSTELCGGTHVSALGDIGPIRIVA
                     EGSIGSNIRRIEALTGTAPIERLRDVETVLGRAAELVGVPVDDVLDGIEKRLAEARAL
                     RGELAGLRTVAALGRADELAESAEDGLVVALIDGIDRDGLRQLAMAVRDRDGVRAVVL
                     GAAPEGGGAALVAAVATGSGLDAGALVAEAARTIGGGGRPNPEVTAVGGKAPERLAEA
                     LEQARAAAQAG"
BASE COUNT          612 a         1296 c         1075 g          528 t
ORIGIN      
        1 cctcacttcc cccgaacctg agggcaccgg gagtggcacc aactggtgga aaccggccgt
       61 tgccgtcctc gctgccgggt tgcttcttct gctcgtcctt cggcgtcgcc gctgccaaca
      121 ctgcgagaag cgtctcaccg accgcgacgg tgttctcgtc gacgaagacg acaactacga
      181 atgctcagac aaccctgacg gcgaccacca ccaactcaaa cgcaagtagt cgaagttctt
      241 tctgccggac tcccgacatg tgaactcggg ccttcgagcc cgatcaccga acgagaccgg
      301 tcagatcagc gcgtagccag cacggcacgg gcagcagcat ccatgaccgc taccggtgcc
      361 tcggatcccg tccagaggcg aaaggcgtgt gccgcctgga acacgagcat cgacaggccg
      421 ttgtgggctt cgattccgcg gccgcgcagg gcagccaacc aggcggtttc cggcgggtgg
      481 tagatcaggt ccacagcaac tgtcccgacg gccactgatt cagggtccac gggcaaggcc
      541 ccgtcgtcgg tcatccccac cgaagtggcg ttgaccacca gatcagcggc agcgactgtg
      601 tcggacagtt cgtcagaccc gaccattcgg ccgaccgggc cagccaaacc tgcggccacc
      661 tcggcccggg acgccgtacg gttgactacc gccacctcgg ctgccccggc tctagccaag
      721 gccagaacta ctgcgcgtgc cgctcccccg gccccaatga ccaccgtgct ccggcccgct
      781 gggtcaaagc cggtgtcgtg gcgtagacca tcaaggaacc cgtccccgtc agtgttgtgg
      841 ccaacgaggc ggcctccctc gaccacaacg cagttcacgg cgtcaagcac ttctgcttgt
      901 tcggtccggt gatctaccgc ggcggctacg gccgccttat ggggcatggt caccgaaagc
      961 ccggccaggc ccaaggcccg cacggcatcc agcgcctcat cggaccgacc ctcagccacc
     1021 tcgagggcca cgaagtgcca gtccagcccg acctcagcaa acgccgcgtt caaaagtgtc
     1081 ggcgacaagg agtgccgcac cgggtcaccg atcacggccg ctagtcggct cgccccactc
     1141 atcggcgggc gtcggtccgg ggtcgggccc ggggtctggt caggggtcgg ttcagccaca
     1201 acccagatcc ttcaccacgc agaccctccg cgccgtctca aattcggaag ccgtggtggc
     1261 aaacgtgtgc gcaccagaca ccccgccctc atcggtacgc acgtagtaca tccacgatcc
     1321 cggatcagga gccagagcgg cctccagcga agcgcgacct ggtgacgcga tcggcgtcgg
     1381 cggcaggccg accacgaccc gggtgttcca gagcgacacc acggagagat cctcgctcgt
     1441 catcggttca ccagctgtct tacccaccgc gtaccggctt gacgcgtcga tccccagacg
     1501 ccagttggcg gccaaccggt tgtggatgac gcggctgatc ttcggccggt cgccgtccag
     1561 cagcgcctcc tcctcgatca gcgacgccag gatcaccgcc tcgtacgggg tgaggcctac
     1621 ctcggcagac cgggccacga ggtccaactg ctcgaccacc cgacggaact gctggtgcat
     1681 tcggagcacc aggcccagtt catcagccac ggttgcttca tccagttggt acgtgtcgcc
     1741 aaatagcagg ccctcgagcg cccgttcccg gtgcccggtc gacccgtgct cccattggag
     1801 acgatcgctg accagcgaag cccgcagttc gtcctcttca aagagcggca tctcgcgcag
     1861 cagtcgttgc accgtctgct caacggtcag gccctcgggc acagtcaccc ttatgacctc
     1921 ctcggggatc ggcccctcgt cgaggagggc caccacggcc tcgaacccga ggtgttccct
     1981 gaggacgtag tccccagcct gaaacgagta ctcgatgccg gactcgcagc cgatcagcca
     2041 acgaatagct gaggggcatc gcatccactg acggaacatg gccgggttgt cgatcacccc
     2101 ggcatcgccg agcgaaacca ccacgtcatt ggtcgaccag ccctcaacaa tggagaactc
     2161 cacctcgtcg ccgggaagcg cctcgggcgt catctggtcg tccacccacc ccaggaacag
     2221 ccgatagccg acgacgaggg ccagtagcac cagggccatc accagtcccc atcgtgggaa
     2281 tggccccaac aacggtcgat gacggaccca gcggacatcg gggcggggct ggtgctgatc
     2341 gggggccccg tgggaatcgg gggccggcgg cgagccggtc acccgagggc ctcccggcgg
     2401 gcatccagcc acccttggag catgaccgct gcggccacca tgtcgaccac cttccggcgt
     2461 tgcggagctc ggaggtcctg ttcacggagg gcccgttcgg cggtcacggt ggtcaggcgt
     2521 tcatcgtagg tctcgaccgg aacccccggc cgttcaccca ggacctgcgc cagaagggtg
     2581 gcttccgccg ccatggcttc ggccatgggg cccaccgacc catccaggga gtacgggatg
     2641 ccgacgacga ccacttcgac cccccactcc tcggcgaggc cagccagggt gcgatgttcg
     2701 ccgggccggt cgccagtccg atgaacgacc tcgatgggcg tagccacccg gccgtcgctg
     2761 tcgctgaccg ccaccccgat ccgcttggac cccaggtcca gacccagggc cctcaacggt
     2821 ctcagccggc ctgggctgcc gcccgcgcct gttcgagtgc ctcggccagg cgttccggtg
     2881 ccttgccgcc gaccgcggtc acctcgggat tggggcggcc accgccgccg atggtccggg
     2941 cggcctcagc gaccagcgcc ccggcgtcca gaccactgcc cgtcgccacg gcggctacca
     3001 gggcggcccc tcccccttcg ggggcggcac ccaggacaac ggcccgtacc ccgtcgcggt
     3061 cacgaaccgc catggccaac tggcgcaacc cgtcgcggtc gatcccgtcg atcagtgcca
     3121 caaccagtcc gtcctcggcg gactcagcca actcgtcggc acgccccagg gcggccaccg
     3181 ttcgcaggcc ggccagttcg ccgcgaagag cgcgggcttc ggcgagtcgt ttctcgattc
     3241 cgtcaaggac gtcgtcgacc ggcacaccaa ccagttcggc agcacgcccc aggaccgtct
     3301 ccacgtcacg gagtcgctca atgggcgcgg taccggtcaa cgcttcgatc cgacggatgt
     3361 tcgaaccgat ggagccctcg gccacgatcc tgatcggacc gatatcgccc agggccgaga
     3421 cgtgggtgcc gccgcataac tccgtcgagt gcggtccggc ttcgagcacc cgcacggtgt
     3481 cgccgtactt gtcgccgaag aaggcaatgg c
//
LOCUS       DASCMR010000315         2069 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001529710, whole genome shotgun sequence.
ACCESSION   DASCMR010000315 DASCMR010000000
VERSION     DASCMR010000315.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2069)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2069)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001529710"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..202)
                     /locus_tag="QGG16_07450"
     CDS             complement(<1..202)
                     /locus_tag="QGG16_07450"
                     /inference="COORDINATES: protein motif:HMM:NF012584.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein subunit"
                     /protein_id="HJP25146.1"
                     /translation="MARIELESPVTGVVWKVARDPGAVVAAGDAVVVVESMKMEIPVE
                     ATEAGTVEEVLVAEGDQVSEDDP"
     gene            317..550
                     /locus_tag="QGG16_07455"
     CDS             317..550
                     /locus_tag="QGG16_07455"
                     /inference="COORDINATES: protein motif:HMM:NF024139.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HJP25147.1"
                     /translation="MTVEPISDSPVNPTWLGVGDVAARLGVVSKTVYRMIDNGSLTAY
                     RIGRVIRVKESDLVSYEDSCRIQPGDLTHLIEG"
     gene            935..2008
                     /locus_tag="QGG16_07460"
     CDS             935..2008
                     /locus_tag="QGG16_07460"
                     /inference="COORDINATES: protein motif:HMM:NF013614.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SufD family Fe-S cluster assembly protein"
                     /protein_id="HJP25148.1"
                     /translation="MAAVVVVRNGWVVETTSSSDAVDAGVYVGPVGEAPDGESLFGSA
                     IEAPVDLFSHLNRGFGPEPVAVVVPDGVRLQAPIVVVVLTDADGAAVFPRVLVRCGDD
                     AAATVVELHTSTDVDSLVVPVLEATVGRNGHLRHGLVQELGPRVFQLGHQAFRVGQSG
                     RIDAFAAALGGDYARTRTDCRLVGRGAEGRLAAAYFGEDDQTLDFRTFQDHAAPDTRS
                     ELLFKGALDGASRSIYTGLIRVRPEAVRTVANQTNRNVKLSPEAWAESVPNLEIETDD
                     VVCSHASTVSPVDEDQRFFLESRGVPTVTAERLLLEGFFEDVAATAPHPAVAETLREA
                     LADRLDRRDASSREAGAEMGATA"
BASE COUNT          329 a          663 c          690 g          387 t
ORIGIN      
        1 cgggatcgtc ctcggagacc tgatcgcctt cggccaccag gacctcttcg accgtgcctg
       61 cctcggtggc ctcgacgggg atttccattt tcatggactc cacgacgacc acggcgtcgc
      121 cggcggccac cacggctccg gggtctctgg ctaccttcca caccacgccg gtgaccggcg
      181 attccagttc gattcgtgcc atggttcgag ttcagcatcg ggtcggcagc cgcgccacca
      241 tgggccgatg ggtgccgttc caggcaacgg gattgggggc cgatcgcggg atcaagagtc
      301 aactagggtt atcaagatga ctgtagagcc catcagcgat tcgccagtga acccgacctg
      361 gctgggggtt ggcgacgtgg cggctcgtct gggtgtcgtg tccaagacgg tgtaccgcat
      421 gatcgacaac ggaagcctga cggcctatcg gattggtcgg gtgattcggg tgaaggagtc
      481 ggacctcgtg tcctacgagg actcctgtcg gattcaaccg ggtgacctga cgcatctgat
      541 cgagggctga tcgtcggtcg gggattacac ctacgacgat agggtaaatc ccaagtaacc
      601 gcccattggc cagcttgact gacccctccg cctgactgac tcctccgccc gaccggctcc
      661 cgaaagggga gtcggttgtc tggaccggct ccgaggtacc gccctgaacg ccttttctgc
      721 caatgtctcg agtggtctcc ccggaccgga ctggcttgcc gatcttcgtc gctccaccct
      781 cgaaggcctc gacgacgtcg agcgtccaga caccgatgaa gaggtatggc gctattcccg
      841 ggtcggcgaa atcgatctcg acgggtatgc gccgctgaag cgccagcggg ccgctgacac
      901 catcgttcaa cgcgacctgt ccgcctatgg cgaaatggcc gccgtcgtgg tcgtccgcaa
      961 cggctgggtg gtcgagacca ccagttcgtc agatgctgta gacgctggcg tgtacgtcgg
     1021 tccggtgggt gaggcaccgg acggcgaatc gttgttcggt tcggcgatag aggccccggt
     1081 cgacctgttc agtcacctga atcggggctt cggacccgaa ccggtggccg tggtggtccc
     1141 cgacggggta cgcctccaag cgccgatcgt ggtcgtcgtg ctgaccgacg ccgatggcgc
     1201 ggcagtcttc ccccgggtgc tggtgcggtg cggagacgac gcagcggcca cggtggtcga
     1261 gctccacacg tccaccgacg tggactccct cgtggtcccc gtcttggagg ccaccgtcgg
     1321 acgtaacgga cacctccgac atggcctggt ccaggaactc ggcccccggg tctttcagtt
     1381 gggtcaccag gcgttccggg tcggccagtc gggtcggatc gacgcctttg ccgccgccct
     1441 cgggggcgac tatgcccgca cccgtaccga ctgtcgtctc gtgggtcggg gtgccgaggg
     1501 acgactggcc gccgcctact ttggcgagga cgaccagacg ttggacttcc ggacctttca
     1561 ggaccatgcg gcgcccgaca cccggagcga actgctgttc aagggagcgt tggacggtgc
     1621 gtcgcgttcg atctacacgg gtctcatccg ggtccgcccc gaggcggttc ggacggtggc
     1681 caaccagacc aaccgcaacg tgaaactctc gcctgaggca tgggctgaga gcgttcccaa
     1741 cctggagatc gagaccgacg acgtggtgtg cagtcacgcc tcgacggtgt ctcccgtcga
     1801 cgaggatcag cgcttcttcc ttgagagccg tggcgtgccc acggtgactg ccgagcgact
     1861 ccttctggaa ggcttcttcg aggacgtggc cgccacggcc cctcatccgg ccgtggccga
     1921 aaccctgagg gaagcattgg ctgaccggct cgaccgacgt gatgccagtt ctcgtgaagc
     1981 cggtgctgaa atgggggcga cggcgtgaat gccgtgccgg cctgcgcact ggctgaccta
     2041 gccgagggcg atgccctgcg ggtggtgct
//
LOCUS       DASCMR010000316        13732 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001536871, whole genome shotgun sequence.
ACCESSION   DASCMR010000316 DASCMR010000000
VERSION     DASCMR010000316.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 13732)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13732)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13732
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001536871"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..420
                     /locus_tag="QGG16_07465"
     CDS             <1..420
                     /locus_tag="QGG16_07465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HJP25149.1"
                     /translation="TFAGHPVSCAVALANLQIFQDEGIIGHVQTNESAFRAALDDLAD
                     LPIVGDIRGAGYFYGIELVRDRDTRASFSDDEREHLLRGFLSNRLLELGLICRADDRG
                     EPVIQLSPPLIAGPDEFAEINSKLRQALTEAMAELGV"
     gene            431..922
                     /locus_tag="QGG16_07470"
     CDS             431..922
                     /locus_tag="QGG16_07470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HJP25150.1"
                     /translation="MNELTGAPGRSTSEVFPLDEKDRAIITELQVDGRMSYADLAPRV
                     GLSQAAVRQRVNRLIGRGVMQVVAVTDPLSLGLSTQAMVGISVSGDVRAVAAAVSECR
                     EAEYVLITAGRYDVLAEVLCEDSEALLSLVNDRIRSIDGVASTEVFPILKMEKMTFSW
                     GTG"
     gene            complement(951..2156)
                     /locus_tag="QGG16_07475"
     CDS             complement(951..2156)
                     /locus_tag="QGG16_07475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HJP25151.1"
                     /translation="MTNALLHPFSPPAMPEGDFIDIVRGEGSLVYDASGKDYVDAMAN
                     LWLCQVGHGRTEIIDAVTAQMHQMEAYNTFAPFTNGPAARVAEMIVERSPHPDGRTFL
                     GCSGSEAVDTALKIARLVQQRRGTEGRQVIIKRTNGYHGTNFGGTSAQGIAPNREGWG
                     DLVPHFLEVPHDDLEAMASIFAEQGDRIAAVLTEPLQGAGGVFPPADGYLEGLRRLCD
                     DNGALLIFDEVICGFGRTGEWFGAQTFGVTPDLITFAKGVTSGYLPLSGVIVSRAVCE
                     ELEEPGFPLRTGYTYSGHHASCAAGIANLQIMTDEGLDQRANHVGEKLQEGLRALAAD
                     GHIESWRGMGAVYAAELGRDSIPVRNAILEEGVIVRPIGTCLAICPPLVITDDEIGRV
                     IDTLANALR"
     gene            complement(2153..3376)
                     /locus_tag="QGG16_07480"
     CDS             complement(2153..3376)
                     /locus_tag="QGG16_07480"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJP25152.1"
                     /translation="MAEDLTSNGEPSKTGPSLAPYFLILFGASAGLGSIIVLLAEIRS
                     ELGFTDTGIGLAIAAGFAAAFVANISMAPQADRGRAPAMLRGGLALGVVGMVLLAVGQ
                     DLWHYVLGRAVFGFALGTAGPAARRTVIVADPTNLGRNMGRLGAWDVGGFVAGPMIAS
                     LLAGIGGFRFTFWAMAVALAMLLPVSFRAQPDTAARDEEGLGLKGLLRIRRLVGAFFV
                     VAAYFVFIGAFEAVWVLEMDTRGATQTTLAVGITLAALPIALLSPLGGSLAQRYGARR
                     WAIGGLASITLLTTFYGVVPGVAALVAITMATSVMEGFTFPSAPMLVAAAVAENRQAS
                     AQGLMGAVEVATAAVAAMIIAMIYDSHGDLTAWIVTASTMAILLLIGAILTRPTDRQL
                     VQPGVPTDPIRRPFQ"
     gene            complement(3369..4334)
                     /gene="speB"
                     /locus_tag="QGG16_07485"
     CDS             complement(3369..4334)
                     /gene="speB"
                     /locus_tag="QGG16_07485"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: protein motif:HMM:TIGR01230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008783 - agmatinase activity [Evidence
                     IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HJP25153.1"
                     /translation="MTQRFKTGNPQPLGGNEMPRFGGIATFMRLPGTTEPADLDVAVV
                     GVPMDIGTSNRPGARFGPRDIRSESVLLRPYNMATRAAPFDSLRIDDTGDVAASPFDL
                     GAAVDAIEAHYVDLLAHDVITASMGGDHTIVLPILRAMASKHGPVGLIHVDAHTDIND
                     TMFGSKVAHGTPFRRAVEEGLLDSNRVVQIGVRGTGYAADDFDWSREQGFRVVQAEEC
                     WHRSLEPLMAEVREQVDGGPVYLSFDIDGLDPAYAPGTGTPEVGGLTMPQGLEVIRGC
                     RGLDLVGCDLVEVAPIYDTTGMTSLVAANLLYEMLCVLPGVDVRG"
     gene            4414..5043
                     /locus_tag="QGG16_07490"
     CDS             4414..5043
                     /locus_tag="QGG16_07490"
                     /inference="COORDINATES: protein motif:HMM:NF024880.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HJP25154.1"
                     /translation="MVHESYRHEHDKGLMAELRWLRKIRTFWQTDLNRAIVDLAAPQP
                     GERGLDVGAGMGAATVLAARRGAHVVAVEPGGTMRLVARGRRLFNRSRRRITVEPGVA
                     EDLPVAGGSTEVLWAGNAMHHWVDHEAAFAEFARVLAPGGRLVLVDEDYDDPTHPDHG
                     EFAGHEAELTPVDVEAIAVAMVALGLDAAGTYEVVAGVPAKVVRATKPV"
     gene            complement(5050..6462)
                     /locus_tag="QGG16_07495"
     CDS             complement(5050..6462)
                     /locus_tag="QGG16_07495"
                     /inference="COORDINATES: protein motif:HMM:NF005687.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HJP25155.1"
                     /translation="MTDPLWQRTGTELASLMASVDVSAREVIEAHLERIDEVNGWLNA
                     AVLVTADEARAAADATDRARAAGETLGPLAGVPFTVKDGLDLAGHPTTYGIPTFADNV
                     APVDDPTIGRLRSAGAIPIAKTNQPEMAMRLATDNPLFGLTRNPWHPDRTASGSSGGD
                     ASAIASGMTPMGMGSDLGGSVRNPAYACGIAATKTSLGRLPVHGTSPRASEALLGRQL
                     MAVAGPMARSVADLEAMLRVTVGRHPRDPRSVDVPHDGRNFIRRAAVPTDLPGEPIHP
                     DAREAVRRAGEALAAAGWDVVDATPPEMERCYDVWGRLLGEDFPMTMEALSAVMSDDG
                     AHLIRSSMAFWPAGEVAPQEVHIERHRLARQWALFLDDFPVLVLPTWYQPPFGHHDDL
                     SDDLTVVRALYDGVFTPITPANVLGLPATQIPIGCNADGVPLGVQFMADRHREDRTLA
                     AAAVVEAAHPPITPIDPVQD"
     gene            6505..7392
                     /locus_tag="QGG16_07500"
     CDS             6505..7392
                     /locus_tag="QGG16_07500"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJP25156.1"
                     /translation="MPQAESNGLTLEYEEFGDSADPPILLIMGLSAQMTVWPEDFCRQ
                     LAHRGHRVIRFDNRDVGLSTWFDQCPVGDPVEAFLTFLGGGSVESPYAMADLADDAAG
                     LLDALGLDSVHVVGASFGGMIAQRIAIGHPDRVRSLTSIMSMPRVIPMDLEVALSLQA
                     PDVDPSDHETVVASGVAAARLYAGTGFTFDEEGARRQSLANLKRAWHPDGGVRQAFAA
                     LADEDRRPGLAEVTVPALVIHGTEDPLVVPQGGQETADAIPGAELVWIEGMGHEMPEA
                     AWPQILDPISALVARAETL"
     gene            complement(7435..8856)
                     /locus_tag="QGG16_07505"
     CDS             complement(7435..8856)
                     /locus_tag="QGG16_07505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HJP25157.1"
                     /translation="MSEHHLMIIGAERVDADKADEVRSPYDGRVLGSVPVGTTEHLDA
                     AIATAKATLAAGAIPTHERAAILDRLAEALTARQEEFAQSISAEAAKPISTARVEASR
                     AVDTARFSAAVARTMTSEALTLDASPAGEGKTGFIKKVPIGVVGAISPFNFPLNLVCH
                     KIAPAIAAGCPVVLKPASSTPLTALLLAEVLLEDCGLPPGWLNVVTCPGRTAAHLVEH
                     DDVAMITFTGSPPVGWNIRATAPRKKVSLELGNNSPIVIEPDVDVAAAAAKLKMAAFG
                     FAGQTCISTQRIYVHEDIATAFTEAMADQARSLTVGDPADPATDVSSLIDGGETERVA
                     AWVDEATAAGATLVCGGTMTDGVLAPTVLADVTDDMKVSCIEVFGPVVGIATYTDYED
                     ALTRANASTYGLQAAVFTNDIGKALRATEVLEYGGVLINESPSWRADHMPYGGIRDSG
                     NTREGPAYTVREMTEDRLIIIQP"
     gene            8972..10474
                     /locus_tag="QGG16_07510"
     CDS             8972..10474
                     /locus_tag="QGG16_07510"
                     /inference="COORDINATES: protein motif:HMM:NF012398.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HJP25158.1"
                     /translation="MGDDAGVRSRVSVAGVSVSVDHYVGGRRLSSPTTFENRSPLDWS
                     TVLAEVSAGDAATADAALAAATEAFEGWAALGTAGRAPHLRRLADLIDERVADIAAVE
                     CVDMGMRHESLRNRVIGRGARNFRAYAELAEQHEERVWSSNGTANRVQRLPAGPAVVI
                     TPWNAPFMLATWKLAPALAAGNPVVLKPAEWSPLSASLLADLADEAGLPSGVLNVVQG
                     IGSQIGPPLTSDRRVRRLSFTGSPATARAIGTAAAANIVPFTAELGGKGALVVFADSD
                     LDAAARTAAGQYDDSGQVCLAGTRLLVEASAADDFLARFHAYADEHLLGDAHDDATTI
                     TPMIHPTHVTRVEGFIERALAAGDKVLRGGHRHVPDGWTGRPEDALWVEPTLIAPASN
                     DSEIVQHEVFGPVLTFQTFVDEDEAIRLANSTAYGLSATLFTGSAERAERVGGALRAG
                     TTWVNCFLVRDLTAPFGGLGISGLGREGGDHALEFHADLKTLQIREDTTT"
     gene            10471..11640
                     /locus_tag="QGG16_07515"
     CDS             10471..11640
                     /locus_tag="QGG16_07515"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019640.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP25159.1"
                     /translation="MSDLITPRRRELVGQMAALGPTIAARADQVDRDAAFPYENYADL
                     REAGFLALCIPEEHGGLGADFSTYALVSEELARHCGSTALTFNMHTATMLLIGQIADD
                     LSMGDEERVEHDRRRTAVWRGVVEDGTIHAQPFSEGRAPGETAGFATQAVPVDGGFRV
                     SGRKIFASLSEAADSHNVTCMVEGDDRVRFLGVPADAEGITIQGDWDPLGMRGTVSKN
                     LLFDNVFVRADQELLPPGCFDQVATRWPYFYMTLSFSYLGIQRAVLDYTAAALRGDGG
                     STERRDHPQKQNGWAEMRLAWERSQALTYRVLGEVGVDPTEDQLHRAWSATVTAMETA
                     PEVASTAVRVCGGRSLLRPSALERMYRDARCGATMLPWSVEVTRDRLGRAGLYDD"
     gene            11670..12707
                     /locus_tag="QGG16_07520"
     CDS             11670..12707
                     /locus_tag="QGG16_07520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25160.1"
                     /translation="MSVPWHRIEAFSDHFARCAVHAGETAVVLAEDDSRPELVKAAVV
                     ALQRLGAAVSTVVLPTLPNRGPVPIRSTGASVALAHNPAVLAGLAAADFIADCTVEGL
                     LHAEERPAILSDGARILMLSNEHPEVFDRVGHDESLSDRVAHGRQLLAGASTMQVTSV
                     AGTDLTVHLAGAVVAGSDGTVTEPGGIAHWPGGLVLCFPAAGSTSGTIVMAPGDANLT
                     FKEYVRSPITCTLVDDHVVSVDGDGLDAELFSSYLAAWDEPEAYAVSHVGWGMNHACR
                     WDVLPLYDKADLNGTELRAFAGNFLWSTGANEVADRFCRGHFDLPMRNCTVALDGVSV
                     VVDGTLVPDLT"
     gene            complement(12789..>13732)
                     /locus_tag="QGG16_07525"
     CDS             complement(12789..>13732)
                     /locus_tag="QGG16_07525"
                     /inference="COORDINATES: protein motif:HMM:NF012296.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HJP25161.1"
                     /translation="LVNRGFTRMTVESYEEPIRELTVEILDEALTLGEFDFVAEVARL
                     LPMRMLGRLLGIPDDHAEQLVEWGDQLLSNSDPEYTDHVVDQVDTDEFRLIPFRSPAG
                     LEVFRYAQKAAAERRGCPHDDVISRLLATTTDGEPLSDLEFNNFFALLVAAGNDTTRY
                     SLTEGLRALVDHPKQMQALRNEQTLMGTAVEEILRWTTVTTHFRRTATSDQRLHGRTI
                     RKGDKVVLWWASADYDERKFDDPYRFDIRRDPNDHVAFGRNGPHLCLGAWLARMEIRI
                     TLQELLARTTDIEIVHASDRLRSNRISGTKHLTIQTA"
BASE COUNT         2201 a         4338 c         4899 g         2294 t
ORIGIN      
        1 accttcgcgg gccatccggt gagctgcgcc gtggcgctgg ccaacctcca gatcttccag
       61 gacgaaggca tcatcggcca cgtccagacg aacgagtcgg ccttccgggc cgcgctagac
      121 gatctggctg atctgccgat cgtcggcgac atccgtggtg ccggctactt ctacggcatc
      181 gaactcgttc gggaccgcga cacccgggcc tcgttcagcg acgacgagcg cgagcatcta
      241 ctacgaggtt tcctgtccaa ccgccttctg gaactaggcc tgatctgtcg ggccgatgac
      301 cggggtgaac cggttatcca gctctcgcca ccgctcatcg ccggcccaga tgagttcgcg
      361 gagatcaact cgaaactccg tcaggcgcta accgaagcca tggctgagtt gggcgtgtag
      421 gaccggcatc gtgaacgagc tgacgggggc cccgggacgg tctacgagcg aggtcttccc
      481 tctcgacgaa aaggatcgag cgatcatcac tgaactccag gtggacgggc gcatgtccta
      541 cgccgaccta gcgccacgcg tcggcctgtc ccaggcagcg gtgcgtcagc gggtcaaccg
      601 gcttatcggg cgtggggtca tgcaggtggt ggccgtgacc gatcccctca gcctcggcct
      661 gtccacccag gccatggttg gtatcagcgt ctccggtgac gtccgggcgg tggctgctgc
      721 ggtctctgag tgtcgggagg ccgagtatgt cctgatcacc gctggccgct acgacgtgct
      781 agccgaggtt ctgtgcgagg acagcgaggc tctgctgtcg ctggtcaacg accgaatccg
      841 gtctatcgac ggcgtggcct ccaccgaggt gtttcccata ctcaagatgg agaagatgac
      901 gttctcctgg ggcaccggct aacgcttgct tcccggtctc accggtctgg tcaacgcaga
      961 gcgttggcca gggtgtcgat gacgcggccg atttcgtcgt cggtaatgac gagcggcgga
     1021 cagatggcca ggcaggtccc gatgggccgc actatcaccc cctcctcaag gatggcgttt
     1081 cgtaccggga tggagtcgcg gcccagttcc gcggcgtaca ccgcgcccat gccccgccac
     1141 gattcgatgt gtccgtcggc cgccagggca cgcaggccct cctggagctt ttcgccgacg
     1201 tggttggccc gctgatcaag gccttcgtcg gtcatgatct ggaggttggc tatgcccgct
     1261 gcgcacgagg catggtgtcc cgagtacgtg tagccggttc ggagcgggaa gccgggctct
     1321 tcgagctcct cgcagacggc ccgggacacg atgacgccgg acagcgggag gtagcccgac
     1381 gtgacgccct tggcgaaggt gatcaggtca ggggtgacgc caaaggtctg ggcgccgaac
     1441 cattcgccgg tccgaccgaa gccgcagatt acctcatcga agatgagcag tgccccgttg
     1501 tcgtcacaca ggcgacgcag gccctcgagg tagccgtcgg ccggtgggaa gacaccgcca
     1561 gcaccctgta gcggctcggt caggacagcg gcaatccggt caccctgctc ggcgaagatc
     1621 gacgccatgg cctctaggtc gtcgtggggg acctccagga agtgggggac caggtcgccc
     1681 cagccctcac ggttgggggc gatgccctga gctgacgtcc ctccgaagtt ggttccgtgg
     1741 tagccgttgg tgcgcttgat gatgacctgg cgaccctcgg tgccccggcg ttgctggacc
     1801 agtcgggcaa tcttcagcgc ggtgtcgaca gcctcagatc ccgagcaacc caggaaggtc
     1861 cgtccgtcgg ggtgcggcga ccgctccacg atcatctcag ccacccgggc ggcgggaccg
     1921 ttggtgaacg gagcgaaggt gttgtacgcc tccatctggt gcatctgagc ggtgacggcg
     1981 tcgatgatct cggtacgtcc gtggccgacc tgacagagcc agaggttggc catggcgtcg
     2041 acatagtcct tgccggaggc gtcgtagacg agcgagccct cgccgcggac gatgtcgatg
     2101 aagtcgccct cgggcatggc cggtggggaa aacgggtgga gcagggcgtt ggtcattgaa
     2161 agggcctcct gatcgggtcg gtggggacgc cgggttggac gagctgacgg tcggtgggtc
     2221 gcgtgagtat ggcaccaatc agcaaaagga tcgccatggt ggaggcggtg acaatccagg
     2281 ccgtgaggtc accgtggctg tcgtagatca tggcaatgat catggctgcc accgcggccg
     2341 tggccacctc gacggcaccc atgaggccct gcgcggaggc ctgtcggttc tcggccactg
     2401 cggcggccac cagcatgggg gccgacggga aggtgaagcc ctccattacc gaggtggcca
     2461 tggtgatggc caccagggcg gccactccgg ggacgacgcc gtagaaggtg gtcagcaggg
     2521 tgatgctggc caggcctccg atggcccacc ggcgggcgcc gtaccgctgg gccagcgagc
     2581 cacccagtgg ggacagcagg gcgatgggga gagccgccag ggtgatcccg accgccagag
     2641 tggtctgggt ggcgccgcgg gtatccatct cgaggaccca cacggcctcg aaggcaccga
     2701 tgaacacgaa gtaggccgcc accacgaaga aggcgcccac caggcggcgg atgcgaagca
     2761 ggcccttgag gccgaggccc tcctcgtctc gtgccgccgt gtcgggttgg gcccggaagg
     2821 agacgggcag cagcatggcc aatgcgacgg ccatggccca gaacgtgaac cgaaagccac
     2881 cgataccggc cagcagggag gcgatcatcg gaccggccac gaagccgccg acgtcccacg
     2941 ctccaaggcg acccatgttg cgtcccaggt tcgtcggatc ggccacgatg accgtgcgtc
     3001 gggccgccgg gccggcagtg cccagggcga agccgaagac cgcccgcccg agcacgtagt
     3061 gccaaagatc ctggccgacg gccaagagca ccatgccgac gacgccgagg gcgaggccgc
     3121 cgcgaagcat ggccggggcc cggccccggt cggcttgggg ggccatgctg atgttggcca
     3181 cgaaggccgc cgcgaatccc gcagcgatgg ccaggccgat cccggtatcg gtgaacccga
     3241 gctcactgcg gatctcggca agcagcacga tgatcgaccc cagccccgct gacgccccga
     3301 acaggatcag gaagtaggga gcaaggctgg gcccggtctt ggagggctca ccgttactcg
     3361 tcagatcctc agccacggac gtcgacgccg gggagcacac agagcatctc gtagaggagg
     3421 ttggcggcca ccagactggt catgccggtg gtgtcgtaga tgggggccac ctcgacgagg
     3481 tcgcatccca cgaggtccag accacggcaa ccccggatca cctcgaggcc ctggggcatg
     3541 gtgaggccac cgacctcggg cgtgccggtg ccgggtgcgt acgcggggtc caggccgtcg
     3601 atgtcgaagc tcaggtagac ggggcctccg tccacctgtt cgcgcacctc ggccatgagc
     3661 ggttcgaggc tgcggtgcca gcattcctcg gcctgaacga cccggaagcc ctgctcccgc
     3721 gaccagtcga agtcatcggc cgcatagccg gtgccccgaa caccgatctg gacgacacgg
     3781 ttgctgtcca gcaggccttc ttcgacggcc ctccggaacg gggtgccgtg tgccaccttg
     3841 gagccgaaca tggtgtcgtt gatgtcggtg tgggcgtcca cgtggatcag cccgactggg
     3901 ccgtgcttac tggccatggc tcgcaggatg ggcagcacga tggtgtggtc gccgcccatt
     3961 gacgcggtga tcacgtcgtg ggccagcagg tcgacgtagt gggcctcgat ggcatccacg
     4021 gcggccccca ggtcgaaggg gctggctgcc acgtcgcccg tgtcatcgat gcggaggctg
     4081 tcgaacgggg cggcccgggt ggccatgttg taggggcgaa gcagcaccga ttcggagcgg
     4141 atgtcgcgag ggccgaagcg ggcgcccggc cggttggagg tgccgatgtc catggggacg
     4201 cccaccacgg cgacgtccag gtcagccggc tcggtggtgc cgggaaggcg catgaaggtg
     4261 gcaatgccgc cgaagcgggg catctcgttg ccgccgaggg gttgggggtt ccctgtcttg
     4321 aatcgctggg tcatcggggg agtattccac gggtggtcct ggtgagtcgc ctcgaatcgg
     4381 tggtggcggt cgggccatgg caggctccgc accatggtcc acgagagtta ccgacatgaa
     4441 cacgacaagg gcctgatggc tgagcttcga tggcttcgaa agatccgcac cttctggcag
     4501 accgacctga accgggccat cgtcgacctg gcagctcctc agcccggtga gcgtggtcta
     4561 gacgtgggag ccggcatggg tgcagccacg gttctggcag ccaggcgtgg tgcccacgtg
     4621 gtggccgtgg agccgggcgg caccatgcgc ctggtggccc gggggcgacg attattcaac
     4681 cggagtcggc ggaggatcac cgtcgaaccc ggggtggccg aggacctgcc ggtggccggg
     4741 ggatccactg aagtgctctg ggcgggtaac gccatgcacc actgggtcga ccatgaggcg
     4801 gcgttcgccg agtttgcgcg ggtgttggcg ccaggcggcc ggctggtact ggtcgacgag
     4861 gactatgacg acccgaccca tcccgaccat ggagagtttg ccggtcacga ggccgagttg
     4921 acgccggtcg acgtggaagc catcgccgtg gccatggtgg ctctggggct ggatgccgcc
     4981 ggtacctacg aggtggtggc cggcgtcccg gccaaggtcg ttcgggcgac caagccggtt
     5041 taacgcaggt caatcctgaa cgggatcaat gggagtgatg ggcgggtggg ctgcctcgac
     5101 gacggcggcc gccgcgaggg tgcggtcctc tcggtgacgg tcggccatga actgcacgcc
     5161 gaggggcaca ccgtcggcgt tgcatccgat tgggatctgg gtggcgggaa ggccgagcac
     5221 gttggccggg gtgatgggtg tgaagacgcc gtcgtagagg gcccggacga cggtcaggtc
     5281 atcggagagg tcgtcgtgat ggccgaacgg cggctggtac caggtgggca gcaccagcac
     5341 cggaaaatcg tctaggaaca aggcccactg gcgggccagg cggtggcgtt cgatatgaac
     5401 ttcctggggt gccacctcac cagccggcca gaacgccatc gaggagcgga tcaggtgggc
     5461 gccgtcgtcg gacatcacgg cggacagggc ctccatggtc atcgggaagt cttcgccgag
     5521 gagccgaccc cacacgtcgt agcaccgctc catctcgggt ggggtggcgt cgacgacgtc
     5581 ccagccggcg gcggccagag cttcgccggc ccggcgaacg gcctcgcggg catcagggtg
     5641 gattggctca ccgggcaggt cggtgggcac ggcggcccgt cggatgaagt tcctgccgtc
     5701 gtggggcaca tcgactgacc gggggtcgcg cgggtggcgc cccacggtga ctcgcaacat
     5761 cgcctcgagg tccgccaccg agcgggccat ggggccggcg acggccatga gttgccgtcc
     5821 cagcagagct tcggatgcgc ggggtgacgt gccgtgtacg ggcaggcgtc cgagggaggt
     5881 cttggtcgca gcgataccac acgcgtaggc cgggttgcgg actgacccgc cgaggtcact
     5941 gcccatgccc atgggggtca tgcccgaggc gatggccgaa gcgtcgccac cggacgatcc
     6001 gctggccgta cggtccgggt gccaggggtt gcgggtcagg ccgaacaagg ggttgtcggt
     6061 ggccaaccgc atggccatct cgggctggtt ggtcttggcg atggggatgg ccccagcgga
     6121 ccggagtcgg ccgatggtgg ggtcgtcgac cggggcgacg ttgtcggcga aggtcgggat
     6181 gccgtaggtg gttgggtggc ctgccaagtc cagcccgtcc ttgacggtga aggggacgcc
     6241 ggccagcggg cccagtgtct cgccggcggc ccgggcccgg tccgtggcgt cggcggcggc
     6301 ccgggcttca tcggccgtta ccagcacggc ggcgttcagc cagccgttca cctcgtctat
     6361 gcgttccaga tgggcctcaa tcacctcgcg agctgacacg tcgacactgg ccatcagaga
     6421 ggccagttcg gtgccggtcc gttgccagag tggatcagtc atcgtggcaa cctaaccacc
     6481 acccggagag cggaggacgg cgacatgccg caagcagagt ccaatgggct gacactggag
     6541 tacgaagagt tcggtgattc cgccgatccg ccgatcctgc tcatcatggg gctgagtgcc
     6601 caaatgacgg tgtggcccga ggacttctgt cggcagttgg cccaccgggg tcaccgagtg
     6661 atccgattcg acaaccggga cgtcggcctc agcacgtggt tcgaccagtg cccggtgggt
     6721 gatccggtcg aggccttcct cacgttcctg ggtggcgggt ccgtcgaatc gccctacgcc
     6781 atggccgatc tagccgatga tgctgccggc ctgctagacg ccctcggcct cgattcggtg
     6841 cacgtggtgg gcgcctcgtt cggagggatg atcgcccagc ggatcgccat cggacatccc
     6901 gaccgggtcc ggagtctgac ctcgatcatg tcgatgccca gggtcatccc catggatctg
     6961 gaggtggccc tgtcgctgca ggctcctgac gtggacccgt cggaccacga aacggtcgtg
     7021 gcatcgggag tcgcggctgc ccgcctatac gccggaacgg ggttcacctt cgacgaggag
     7081 ggagcccgcc ggcaatcact ggccaacctg aagcgggcct ggcaccctga tggtggcgta
     7141 cgtcaggcct tcgccgcact ggccgacgag gatcgtcgcc ccggcctggc agaggtgacg
     7201 gttcccgcgt tggtcatcca cggcaccgag gatccgctcg tcgtgcctca gggtgggcag
     7261 gagaccgccg atgcaatccc gggtgccgaa ctggtgtgga tagagggcat ggggcacgag
     7321 atgcccgagg cggcgtggcc tcagatcctt gatccgatca gtgcgctggt tgcccgggcc
     7381 gagaccctct gaccctttcg gttggtacct gtcggcctgc gggccgacag gcgatcaggg
     7441 ctggatgatg atgaggcggt cctcggtcat ctcgcgcacc gtgtaggcgg ggccttcacg
     7501 ggtgttgccc gagtcacgga tgccgccata cggcatgtgg tcggcccgcc acgacggcga
     7561 ctcgttgatg agcacaccgc cgtactcgag gacctcggtg gcccgcaggg ccttgccgat
     7621 gtcgttggtg aacacagcgg cctgtagccc gtaggtactg gcgttagccc tggtcagggc
     7681 gtcctcgtag tcggtatagg tggcaatgcc caccaccggt ccaaacacct caatgcaact
     7741 gaccttcatg tcatcggtga cgtcggccag aacggtgggg gccagaacgc cgtcggtcat
     7801 ggtgccgcca cagaccagcg tggccccggc tgccgtggct tcatcgaccc aggcggcgac
     7861 ccgttcggtc tcgccgccgt cgatgagcga cgacacatcg gtggccggat cggctggatc
     7921 gcccacggtg aggctgcggg cctggtcggc catggcctcg gtgaacgcag tggcgatatc
     7981 ttcgtgcacg tagatgcgct gggtggagat gcaggtctga ccggcgaagc cgaaggccgc
     8041 catcttcaac ttggcggctg cagcagccac gtcgacgtcg ggttcgatga cgatcggcga
     8101 gttgttgccg agttcgaggg aaaccttctt gcggggggcg gtagctcgga tgttccaacc
     8161 cacgggtggc gagccggtga aggtgatcat ggccacgtca tcgtgttcga ccagatgtgc
     8221 ggcagtacgg cccgggcagg tgaccacgtt caaccagccc ggcggcagac cacagtcctc
     8281 gaggaggacc tcggccagca ggagggcggt caacggggta gacgaggccg gcttgaggac
     8341 caccgggcag ccagcggcga tcgccggtgc aatcttgtga cacaccagat tcaacggaaa
     8401 gttgaacggc gagatggctc cgaccacgcc gatcgggacc tttttgatga agccggtctt
     8461 gccttcacca gccggactgg cgtccagcgt cagggcttcg ctggtcatgg tccgggccac
     8521 ggcggccgag aaccgggccg tgtcgacggc ccgggaggcc tcgacgcggg cagtgctgat
     8581 gggcttggcc gcctcagccg agatgctctg ggcgaactcc tcctgtcggg ccgtaagggc
     8641 ctcggccaga cggtccaaga tggcggcgcg ttcgtgggtg gggatcgctc cggcggccag
     8701 agtggccttt gccgtggcga tggccgcgtc gaggtgttcc gtcgtgccca ccgggacact
     8761 gcccaggaca cgaccgtcgt aaggcgaccg gacctcgtcg gccttgtcgg cgtcgacgcg
     8821 ctcggcgccg atgatcatca ggtgatgttc gctcacgggg aagacctccg gggacgcgcg
     8881 tgtgaccggg acaacctaca ctgatgcaga tacttcggac ccgaatgaat ctgatggtgt
     8941 gggtccgccg ggccctggga tgagggcgat gatgggcgac gacgctggag tgcggtcacg
     9001 ggtttccgtg gctggggtat cggtctccgt cgaccattac gtcggagggc gtcgcctgtc
     9061 gtcgcccacc accttcgaga atcgctcccc gttggactgg tcgacggtgc tggccgaggt
     9121 gtcggccggt gacgccgcca cagcggatgc tgccctggcc gcggccaccg aggccttcga
     9181 gggctgggct gccctgggta ccgccgggcg ggcaccccac ctccgccgtc tggccgacct
     9241 gatcgacgag cgggtggccg atatcgcggc ggttgagtgc gtcgacatgg ggatgcgcca
     9301 cgagagcctc cgcaaccggg tcatcggccg gggggctaga aacttccggg cctacgccga
     9361 actggccgaa cagcacgagg aacgggtctg gtcgtccaac ggcaccgcca accgtgtgca
     9421 gcgactccct gctggtccag cggtggtcat cacgccgtgg aacgccccgt tcatgctggc
     9481 cacctggaag ctggctcccg cgctggctgc cggcaacccg gtggtcctca agcctgccga
     9541 gtggtcgccc ctgtcggcca gcttgctggc cgacctagcc gacgaggccg gactgccgtc
     9601 cggcgtactc aacgtcgtgc agggcatcgg gtcccagatc ggtccaccac tgacatcgga
     9661 ccggcgggtg cggcgcctgt cgttcaccgg ttcgccggcc accgcccggg cgatcgggac
     9721 ggctgccgcg gccaacatcg tgccgttcac cgcggaactg ggcggaaagg gcgccctggt
     9781 ggtgtttgcc gacagcgacc tggatgcagc ggcccgcacg gcagccggcc agtacgacga
     9841 ctcgggccag gtctgcctgg ccgggacccg cctactcgtc gaggcttcgg cggccgacga
     9901 ctttctggcc cggttccacg cctacgccga cgagcacctc ctcggcgacg cccatgacga
     9961 tgccaccacg atcactccga tgatccaccc cacccacgtg acccgcgtcg aggggttcat
    10021 cgagcgggcg ctggcggccg gcgacaaggt gctccggggt gggcaccgtc atgtccccga
    10081 cggttggacc gggcggcccg aggacgccct gtgggttgag cccaccctta tcgcgccggc
    10141 gtccaatgac agcgagatcg tccaacacga ggtgttcggg cccgtcctga ccttccagac
    10201 gttcgtcgac gaggatgagg cgatccggct tgccaactca acggcctacg ggctgtcggc
    10261 cactttgttc accggatcgg ccgagcgggc cgagcgggtg ggtggcgctc ttcgggcggg
    10321 caccacctgg gtcaattgct ttctggttcg cgacctgacg gcgccgttcg gtggcttggg
    10381 catcagcgga ctggggcgcg agggtggtga tcacgccctg gagttccacg ccgacctcaa
    10441 gaccctccag atacgtgagg acaccaccac atgagcgacc tgataacccc ccgccggcga
    10501 gagctggtgg gccagatggc agcgctgggg ccgaccatcg cggcccgggc cgatcaggtc
    10561 gaccgggatg cggcctttcc ctacgagaac tacgccgatc tccgcgaggc gggcttcctt
    10621 gccctgtgca tccctgagga acacggcgga ctgggtgcgg acttctcgac ctacgccctg
    10681 gtatccgagg aattggccag gcactgcggt tcgaccgcgc tgaccttcaa catgcacaca
    10741 gccaccatgt tgctgatcgg ccagatagcc gacgacctct cgatgggtga cgaggagcga
    10801 gtggagcacg accggcgccg caccgccgtg tggcgtggcg tggtcgagga cggcacgatc
    10861 cacgctcagc cgttcagcga ggggcgggca cccggggaga ccgcgggctt cgccacgcag
    10921 gccgttcccg tcgacggggg cttccgggtg tcgggtcgca agatcttcgc ctcgttgtcc
    10981 gaagccgccg acagtcacaa cgtgacttgc atggtcgaag gcgacgatcg ggtccggttc
    11041 ctcggggtac cggctgacgc ggagggcatc accatccaag gcgactggga tccgctgggc
    11101 atgcggggca ccgtttccaa gaacttgctg ttcgacaacg tgttcgtacg tgccgaccag
    11161 gagttactgc cgcctggttg cttcgaccag gtggccaccc gctggccgta cttctacatg
    11221 acgctgtcgt tttcctacct ggggatccag cgggcggtgc tggactacac ggcagccgcc
    11281 ctgcgaggcg acggtgggtc gacggaacgc cgggaccacc cgcagaagca gaacgggtgg
    11341 gcggagatgc gcttggcgtg ggaacggtcc caggccctga cctaccgggt gcttggcgag
    11401 gtaggggtgg atccgaccga ggaccaactc catcgggcct ggtcggccac ggtgacggcc
    11461 atggagacgg cgcctgaggt ggcgtccacc gcggtccggg tgtgtggcgg ccgctcgctt
    11521 ctgcgaccca gcgctctaga gcggatgtat cgcgacgccc gctgcggtgc cacgatgctt
    11581 ccgtggagcg tcgaggtgac gcgcgatcga ctgggccggg ctggcctcta cgacgactga
    11641 accgatcagg aagggatggg gggactgaca tgagtgtgcc gtggcatcgg attgaggcgt
    11701 tctccgacca cttcgcccgt tgtgcagtgc acgccggcga gacggccgtg gtgctggccg
    11761 aggacgacag ccgtcctgaa ctggtcaagg cggccgtggt cgccctgcaa cgcctcggtg
    11821 ccgcggtgtc gaccgtggtg ctgcccacgc tccccaaccg gggccccgtc cctatccgct
    11881 ccaccggagc gtcggtggct ctcgcccaca acccggcggt gctggcagga ctggcagctg
    11941 ccgacttcat tgccgactgc actgtggagg gcctgctgca cgctgaggaa cgcccggcca
    12001 tcctttccga cggcgcccgg attctgatgt tgtccaacga gcacccggag gtgttcgacc
    12061 gcgttggcca cgatgaatct ttgagcgacc gggtggccca tggacgccaa ctgctggccg
    12121 gggcgtcgac catgcaggtc acctccgtgg ccggaaccga cctcacggtc cacctggctg
    12181 gagcggtggt cgctgggtcg gacggcacgg tcaccgagcc gggcggtatc gcccactggc
    12241 caggcgggct ggtgctctgc tttccggccg ccggctctac ctcgggaacc attgtcatgg
    12301 ccccgggtga cgccaacctg accttcaagg aatacgtgcg atcaccgatc acctgcacgc
    12361 tggtggacga tcacgtcgtg tccgttgacg gcgacgggtt ggacgccgaa ctcttctcgt
    12421 cgtacctggc tgcatgggac gaaccggagg cctacgcggt cagccacgtg ggctggggca
    12481 tgaaccacgc ctgccggtgg gatgtcctgc cgctgtacga caaggccgac ctgaacggca
    12541 cggagctacg ggccttcgcc gggaacttcc tgtggtcgac cggggccaac gaggtggccg
    12601 accgattctg ccggggccac ttcgacctgc cgatgcgaaa ctgtacggtg gccctcgacg
    12661 gtgtgtccgt agtggtcgac ggaaccctgg ttccagatct gacctgaatg actggccagg
    12721 ccaggccagg cctgggctga cggccgggac cgggtaggta cgcggctcgg aggactgcct
    12781 ctttgagctc aggcggtctg gatggtgagg tgcttggtgc cgctgatgcg gttggaacgc
    12841 aggcggtccg aggcgtgcac gatctcgatg tcggtggtgc gggcgagcag ttcctgcagg
    12901 gtgatgcgga tctccatgcg ggccaaccac gctcccagac agagatgcgg cccgttgcgc
    12961 ccgaaggcaa cgtggtcgtt ggggtcccgt cggatgtcga accggtaggg gtcgtcgaac
    13021 ttccgctcgt cgtagtcagc cgacgcccac cacagcacga ccttgtcgcc ctttcggatg
    13081 gtgcggccgt ggagccgctg gtcactggta gcggtgcgcc ggaagtgggt ggtgaccgtg
    13141 gtccaccgca ggatctcctc gactgccgtt cccatcagtg tctgctcatt tcgtagagcc
    13201 tgcatttgct tgggatggtc tacgagcgcc cgtagacctt cggtcaacga gtaccgggtg
    13261 gtgtcgttgc cagcggcgac cagcagagcg aagaagttgt tgaactccag atcactaagt
    13321 ggttcgccgt cggtggtcgt cgccaatagt cgggagatca catcgtcgtg ggggcagccc
    13381 cgccgttcag cagctgcctt ttgcgcgtag cggaagacct ccaggccggc tgggctgcgg
    13441 aaagggataa gtcggaattc gtcggtgtcg acctgatcga caacgtggtc ggtgtactcg
    13501 ggatcggagt tggacaggag ctgatcgccc cattccacga gttgctcggc atggtcgtcg
    13561 gggatcccca gaagccgacc cagcatccgc atcggaagca agcgggccac ctcggccacg
    13621 aagtcgaact cgccgagggt gagtgcttca tcgagaatct cgactgtgag ctcccggatc
    13681 ggctcctcgt aggactcgac tgtcatacgt gtgaagcccc ggttgacgag cc
//
LOCUS       DASCMR010000317         2516 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001547538, whole genome shotgun sequence.
ACCESSION   DASCMR010000317 DASCMR010000000
VERSION     DASCMR010000317.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2516)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2516)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2516
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001547538"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..613
                     /locus_tag="QGG16_07530"
     CDS             <1..613
                     /locus_tag="QGG16_07530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25162.1"
                     /translation="NPVHRWTDEIDVERVGDAFGLGALYEIEVIARDGFGDDGGRAVE
                     VELRARDGNRFVVSGDRFRREFGLRSNWFSVGYGPPDAGTAFPDPQVDEYRVTSTFTA
                     EDLARVTEAADHLEMTVPEFQRAGVWVVAFLLSLSSSERDPLEVPAQTGTERVTTAYM
                     AADGDQQALEKVAAEYSLDGSQAQQVATTVLVFLVGLSKAAGR"
     gene            660..1706
                     /locus_tag="QGG16_07535"
     CDS             660..1706
                     /locus_tag="QGG16_07535"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008879 - glucose-1-phosphate
                     thymidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase"
                     /protein_id="HJP25163.1"
                     /translation="MKGLILAGGSGRRLRPLTHTSAKQLVPIANVPILHYVVADLVGV
                     GITDIGIVVGDTAAEVMASIGDGSRWGAKVTYIAQDRPLGLAHAVVVAGPFLGDEPFA
                     MYLGDNMFEDSLDGVVDGFDGCSAARLLLARVDDPSAFGVADVAPDGTIVGLAEKPEE
                     PASDLALVGVYLFGPRIHEAVRAIEPSARGELEITDAIQWLLDAGEVVEHRVLEGWWI
                     DTGKKDPLLECNRLVLDRLGGDGVVVDGDAEVVDSTLVGPVVVAAGARISGSTVGPYV
                     AVGARCAIEGSTVEHSVLMDGAVVSDLDRLTGSVLGRSAEVTGSRGDRVDLSVLLGDH
                     SVVDARSSEGGTGG"
     gene            1699..2256
                     /locus_tag="QGG16_07540"
     CDS             1699..2256
                     /locus_tag="QGG16_07540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase family
                     protein"
                     /protein_id="HJP25164.1"
                     /translation="MAEVRAVTAIDGVLVVDPVVHVDDRGSFVETWRQEWLGDVAPMV
                     QGNRADRVAGSLVGLHYHRRQADYWVVVGGTARVVLHDLRVGSPTDGATVEMNLGGDG
                     PDRHRGLYIPPGVAHGFAALTDLTLTYLVDGTYDPDDELGVAWDDPAVGADWVVADPV
                     LSARDRANPNRDDLSDDRRPVYVER"
     gene            2258..>2516
                     /locus_tag="QGG16_07545"
     CDS             2258..>2516
                     /locus_tag="QGG16_07545"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HJP25165.1"
                     /translation="MRLLVTGGAGFIGANFVHRAVARGDEVTVYDALTYAGNPANLAG
                     LDGRSGYRFVHADVCDASTLSMVMPDHDAVVHFAAESHVDRS"
BASE COUNT          338 a          808 c          959 g          411 t
ORIGIN      
        1 caaccccgtg caccggtgga ccgacgagat cgacgtcgag cgggtgggcg acgccttcgg
       61 gttgggtgcg ttgtacgaga tcgaggtgat cgccagggac ggcttcggtg acgacggcgg
      121 tcgggccgtc gaggtggaac tccgggcccg ggacggcaac cgcttcgtgg tgtcgggcga
      181 ccgcttccgt cgggagttcg gccttcgttc caactggttc agcgtcggct acgggccgcc
      241 cgatgccggc accgccttcc ccgacccgca ggtggacgag taccgggtga cctcgacgtt
      301 caccgccgag gacctggccc gggtcaccga ggcggccgac catctcgaga tgaccgtgcc
      361 cgagttccag cgggccggcg tgtgggtggt ggcgttcctc ctcagcctgt cttccagcga
      421 gagggacccg ctcgaggtgc ccgcccagac ggggaccgag cgggtcacca cggcctacat
      481 ggctgccgac ggggaccagc aggccctcga gaaggtggct gccgaatact cgctggacgg
      541 ttcccaggcc caacaggtgg ccaccacggt cctcgttttc ctggtgggcc tgtccaaggc
      601 ggcgggacgc tgatcgaggc gcccggaggc cccgtgggcc tcccgatacc ctcgtcgcgg
      661 tgaagggact gatcctggcc ggggggagtg gacggcgtct gcgtccgctg acccacacca
      721 gcgccaagca actggtcccc attgccaatg ttccgatcct gcactacgtg gtggccgacc
      781 tggtgggggt ggggatcacc gacatcggga tcgtggtggg cgacaccgcc gccgaggtga
      841 tggccagcat cggtgacggc agcagatggg gagcgaaggt gacctacatc gcccaggatc
      901 ggccccttgg cctcgcccac gccgtggtcg tcgccggccc ttttctgggc gacgagccgt
      961 tcgccatgta cctgggtgac aacatgttcg aggactccct cgacggggtg gtcgacgggt
     1021 tcgacggctg ttcggctgct cggctgcttc tggcccgggt cgacgacccg tcggcgttcg
     1081 gggtggccga cgtggcgccc gacgggacga tcgtcgggtt ggccgagaag cccgaggagc
     1141 cggcgtccga cctggccctg gtcggcgtgt acctgttcgg tccccgaatt cacgaggcgg
     1201 tgcgggccat cgagccgtcg gcgcgggggg agttggagat caccgatgcc atccagtggc
     1261 tgctcgacgc cggcgaagtg gtggagcacc gggtgttaga gggctggtgg atcgacaccg
     1321 gcaagaagga ccccttgttg gagtgcaacc gcctggtgct ggaccggctg ggcggcgacg
     1381 gtgtggtggt cgacggcgac gccgaagtgg tggactccac tctggtgggt ccggtggtgg
     1441 tggctgccgg tgcccggatc agtggcagca cggtcggccc ctacgtggcc gtgggcgccc
     1501 gctgcgccat cgagggttcg accgtggagc actcggtgct catggacggg gccgtggtgt
     1561 cggacctcga ccggctgacc ggctcggtcc tgggccggtc agccgaggtg acggggtctc
     1621 gcggcgaccg ggtagacctg tcggtgctgc tcggcgacca ttcggtggtc gacgcccgga
     1681 gttcggaggg gggcaccggt ggctgaggtg agggctgtga cagccatcga cggggtgctg
     1741 gtcgtcgacc cggtggtcca cgtcgacgac cggggctcat ttgtcgaaac gtggcgtcag
     1801 gagtggctgg gtgacgtggc acccatggtg cagggcaacc gggccgaccg ggtggccggt
     1861 tccctcgtcg ggttgcacta ccaccgccgc caggcggact actgggtggt ggtcgggggg
     1921 acggcccgcg tcgtgcttca cgacctgcgg gtcggatcgc ccaccgacgg cgccaccgtc
     1981 gagatgaacc tcgggggcga cggtccggac cgccatcgtg gcctgtacat cccgcccggg
     2041 gtggctcacg ggttcgcggc gctcaccgac ctgaccctca cgtacctggt ggacggcacc
     2101 tacgacccgg acgacgagct gggggtggcg tgggacgacc cggccgtcgg tgccgactgg
     2161 gtggtggccg acccggtgtt gtcggcgcgc gaccgggcca acccgaaccg ggacgatctt
     2221 tccgacgacc ggcgacccgt ctacgtggag cgctgaggtg cgcctcctgg tgaccggggg
     2281 cgccggattc atcggtgcca acttcgtcca ccgggccgtg gcccggggcg acgaggtgac
     2341 ggtctacgac gccctcacct atgccggcaa cccggccaat ctggcgggcc tggacggtcg
     2401 gtccggctac cggttcgtcc acgctgacgt gtgtgacgcc tcgaccctgt cgatggtcat
     2461 gccggaccac gacgcggtag tccacttcgc ggcggaaagt cacgtggacc ggtcgc
//
LOCUS       DASCMR010000318        11089 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001555125, whole genome shotgun sequence.
ACCESSION   DASCMR010000318 DASCMR010000000
VERSION     DASCMR010000318.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 11089)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11089)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11089
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001555125"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..271)
                     /gene="rpsK"
                     /locus_tag="QGG16_07550"
     CDS             complement(<1..271)
                     /gene="rpsK"
                     /locus_tag="QGG16_07550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012397714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HJP25166.1"
                     /translation="MAKPSAGGRRPRKKERKNVPHGVAHIKSSFNNTIITITDQGGNT
                     LAWASAGNVGFKGSRKSTPFAAQMAAEECARRAMEHGVRKVDVVVR"
     gene            complement(271..648)
                     /gene="rpsM"
                     /locus_tag="QGG16_07555"
     CDS             complement(271..648)
                     /gene="rpsM"
                     /locus_tag="QGG16_07555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016637793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HJP25167.1"
                     /translation="MARISGVDVPREKRVVIALTYIHGIGRTSALNICEGTGVDPTTR
                     VRDLTDDEVTAIRAFVDQQFKVEGDLRREVSQNIKRKMDIGCYQGLRHRRGLPVRGQR
                     THTNARTRKGPRKTVANKKQVTK"
     gene            complement(661..774)
                     /gene="rpmJ"
                     /locus_tag="QGG16_07560"
     CDS             complement(661..774)
                     /gene="rpmJ"
                     /locus_tag="QGG16_07560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005487032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HJP25168.1"
                     /translation="MKVRASVKRICDKCRVIRRHGRVQVICSNPRHKQRQG"
     gene            complement(816..1040)
                     /gene="infA"
                     /locus_tag="QGG16_07565"
     CDS             complement(816..1040)
                     /gene="infA"
                     /locus_tag="QGG16_07565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015797890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HJP25169.1"
                     /translation="MSKPKEDAIVMEGTVLEPLPNAMFRVELENGHNVLAHISGKMRM
                     HYIRILPGDKVQVELTPYDLQRGRITYRYK"
     gene            complement(1235..1864)
                     /locus_tag="QGG16_07570"
     CDS             complement(1235..1864)
                     /locus_tag="QGG16_07570"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015797888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019205 - nucleobase-containing compound
                     kinase activity [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HJP25170.1"
                     /translation="MTSVRLVILGRQGSGKGTQAGRLVEAYGPVHISTGDMLRAAVAA
                     GTELGLQAKALMDAGDLVGDDLINSIVAERLVEGDVVERGFLLDGYPRTPDQATALEG
                     FLAEAGTPLDVAVNLDVPVDEVTARMVARGRADDTEEGIRRRLDLYESETAPLLAWFA
                     EHDLLDVVDGLADEETVFDRLTSVIDGRLRVGDARGTRSGMPVRCAPGA"
     gene            complement(1865..3187)
                     /gene="secY"
                     /locus_tag="QGG16_07575"
     CDS             complement(1865..3187)
                     /gene="secY"
                     /locus_tag="QGG16_07575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015797887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HJP25171.1"
                     /translation="MLSSMLNMFRVADLRKRIVFTLLMILLYRIGAFMPAPGIDVEQV
                     QLLRDRADQGGVLAFLQLFSGGSLTSFAVFALGVMPYITASIIMQVLGVVVPRIEQWQ
                     QQGAVGQRKITQWTRYLTVAIAVIQSTSFAFLFNDQGNSISGQSGANLLPDFHIGTVS
                     VVVLTLTAGTALLMWMGELITQKGIGNGMSLLIMISIVSGFPAQGSLIQAENGAIVSL
                     VVLAFLMLMVAAIVFVEQGQRRIPVQFAKRVVGRRMYGGQNTYIPLKVNQSGVIPIIF
                     ASSVLYLPVLVAAALPWDGFRGWIDNNLAQPDNVFYFTITGLLIVGFAYFYTAITFDP
                     VKQADTIRKQGGFVPGIRPGHQTERYLARILSRITLPGALFIAGVALVPSILINIFLD
                     TSAGVGSGGAAGFGFIGISILIAAGVSLETMKQVDSQLTMRNYEGFLK"
     gene            complement(3232..3717)
                     /gene="rplO"
                     /locus_tag="QGG16_07580"
     CDS             complement(3232..3717)
                     /gene="rplO"
                     /locus_tag="QGG16_07580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012229042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HJP25172.1"
                     /translation="MKVHDLQPAPGSTKRAKRVGRGIGGKGGKTAGRGSKGQRARNTV
                     RVGFEGGQMPLHQRIPKLKGFKNPFRVEYQAVNLDTIQECGLDEVSPEALHAQGLVGK
                     KSLVKVLGRGELTRAVTVKAHAFSASAEAAITAAGGTIEKLPLPFAVRPAASGNALMN
                     R"
     gene            complement(3719..3913)
                     /gene="rpmD"
                     /locus_tag="QGG16_07585"
     CDS             complement(3719..3913)
                     /gene="rpmD"
                     /locus_tag="QGG16_07585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012229043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HJP25173.1"
                     /translation="MTQLVVTQIRSAIGAKPKQRGTLRALGLGRIGRSNTLPDRGEIR
                     GMIARVPHLVRVEELAGEAE"
     gene            complement(3919..4494)
                     /gene="rpsE"
                     /locus_tag="QGG16_07590"
     CDS             complement(3919..4494)
                     /gene="rpsE"
                     /locus_tag="QGG16_07590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012229044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HJP25174.1"
                     /translation="MAQHNNDDASLRESRVIHINRVAKVVKGGRRFSFTALVVIGDGA
                     GRVGLGYGKAKEVPLAIQKGTEEAKRNLFKVALTGSTIIHPILGVMGAGRVMLKPAAP
                     GTGVIAGGAARAILEEAGIHDILCKSQGSSNHINVARATIAGLKGLRRPDEIARLRGL
                     DPEEFVPGALLEAYRRTEAGVGVGSDDTAGR"
     gene            complement(4494..4850)
                     /gene="rplR"
                     /locus_tag="QGG16_07595"
     CDS             complement(4494..4850)
                     /gene="rplR"
                     /locus_tag="QGG16_07595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015797883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HJP25175.1"
                     /translation="MSSLDRSKARQRRHRRVRKSVRGSESRPRLAVFRSARHISAQVI
                     DDRSGRTVAAASTVQDGVAEGVTGVAAATEVGRVVAERAREAGIASVVFDRGGYKYHG
                     RVAALADAAREAGLEF"
     gene            complement(4847..5386)
                     /gene="rplF"
                     /locus_tag="QGG16_07600"
     CDS             complement(4847..5386)
                     /gene="rplF"
                     /locus_tag="QGG16_07600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015797882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HJP25176.1"
                     /translation="MSRIGKAPITVPSGVEVQIQGRQLAVKGPKGELDIEVPGDITVR
                     QDGEVLLVERPDDERQNRALHGLTRSLVNNMVVGVTEGFSKELQIVGVGYRAAAKGTN
                     ALELQLGFSHPVNVEAPDGISFDVPEPTRIIVSGTDKQVVGQVAANIRSYRKPEPYKG
                     KGVRYLGEHVARKAGKAAK"
     gene            complement(5400..5804)
                     /gene="rpsH"
                     /locus_tag="QGG16_07605"
     CDS             complement(5400..5804)
                     /gene="rpsH"
                     /locus_tag="QGG16_07605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002857494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HJP25177.1"
                     /translation="MTMTDPVADMLTRIRNANVAMHEGVNMPSSKQKVALADILKSEG
                     YIRDYAVSEAKTGPGQVLNIEMKYSPERERVISGVKRVSKPGLRVYSASNRIPRVLGG
                     LGVAVISTSRGLMSDREARRRRIGGEVLCYVW"
     gene            complement(5817..6002)
                     /locus_tag="QGG16_07610"
     CDS             complement(5817..6002)
                     /locus_tag="QGG16_07610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003948630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HJP25178.1"
                     /translation="MAKKALVNKQQKTPKFKVRAYTRCRRCGRPRSVYRAFNLCRICL
                     RSMAHAGEIPGLTKSSW"
     gene            complement(6002..6541)
                     /gene="rplE"
                     /locus_tag="QGG16_07615"
     CDS             complement(6002..6541)
                     /gene="rplE"
                     /locus_tag="QGG16_07615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012229050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HJP25179.1"
                     /translation="MRVRYNDEIRSAVQTELGLANVMQVPRLSKIVVNMGVGDAAQQA
                     KLLDGALTDLEAITGQKPMVTRARKSISNFKLREGQPIGAKVTMRGDRMYEFLDRLIT
                     LAIPRIRDFRGLSPKSFDGSGNYTFGVTEQLIFPEIDYDKVDRTRGMDITIVTSASDD
                     AEGRALLAAFGFPFRKEGQ"
     gene            complement(6582..6896)
                     /gene="rplX"
                     /locus_tag="QGG16_07620"
     CDS             complement(6582..6896)
                     /gene="rplX"
                     /locus_tag="QGG16_07620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011921687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HJP25180.1"
                     /translation="MKIRKGDKVRVLAGKDEGKEGKVSRAIPADDKVIVDGINIAKRH
                     QKPTSATDQGGIIEKAMPLHVSNVAILSPSDGKPTRIGYRFTETGDKVRICKRTGVDI
                     DG"
     gene            complement(6898..7266)
                     /gene="rplN"
                     /locus_tag="QGG16_07625"
     CDS             complement(6898..7266)
                     /gene="rplN"
                     /locus_tag="QGG16_07625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002460061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HJP25181.1"
                     /translation="MIQQETRLRVADNSGAREVLCIKVLGGSKRRYASIGDIFTATVK
                     DANPGAAVKKGEVVKCVVVRTKKERRRPDGSYIRFDENAAVLINDQNQPRGTRIFGPV
                     GRELRDHKFMRIVSLAPEVL"
     gene            complement(7266..7544)
                     /gene="rpsQ"
                     /locus_tag="QGG16_07630"
     CDS             complement(7266..7544)
                     /gene="rpsQ"
                     /locus_tag="QGG16_07630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007628116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HJP25182.1"
                     /translation="MAETTETTERPNRRKVREGLVVSDVQDKTAIVETVDRVRHRRYA
                     KTVQRTKRLHVHDEDNQLSVGDRVRVQETRPLSKLKHWRLVEILERAK"
     gene            complement(7544..7780)
                     /gene="rpmC"
                     /locus_tag="QGG16_07635"
     CDS             complement(7544..7780)
                     /gene="rpmC"
                     /locus_tag="QGG16_07635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012229055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HJP25183.1"
                     /translation="MAKKETLNTLGDTDLLERLSDAKEELFNLRFQLVTGQLENYARV
                     GQVKKEVARMLTELRAREIDAAEAIVAGGEEVAD"
     gene            complement(7783..8199)
                     /gene="rplP"
                     /locus_tag="QGG16_07640"
     CDS             complement(7783..8199)
                     /gene="rplP"
                     /locus_tag="QGG16_07640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012229056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HJP25184.1"
                     /translation="MLMPKKVRHRKQHRGRLKGNSKGQTEMTFGEYGIQALEPGWITA
                     RQIEAARIAMTRHIKRGGKVWINVFPDKPITEKPAETRMGSGKGNPEKWVAVVKPGRI
                     LFELSYSDAVVAREALDRAIQKLPIKARFVEREEGF"
     gene            complement(8503..9132)
                     /gene="rpsC"
                     /locus_tag="QGG16_07645"
                     /pseudo
     CDS             complement(8503..9132)
                     /gene="rpsC"
                     /locus_tag="QGG16_07645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002633602.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
     gene            complement(9432..9782)
                     /gene="rplV"
                     /locus_tag="QGG16_07650"
                     /pseudo
     CDS             complement(9432..9782)
                     /gene="rplV"
                     /locus_tag="QGG16_07650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018371349.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
     gene            complement(9782..10060)
                     /gene="rpsS"
                     /locus_tag="QGG16_07655"
     CDS             complement(9782..10060)
                     /gene="rpsS"
                     /locus_tag="QGG16_07655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001829710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HJP25185.1"
                     /translation="MPRSLKKGPFVDDHLLKKVDVLNESGEKKVIRTWSRRSTIVPDM
                     VGHTMGVHDGRKHVPVYITESMVGHKLGEFAPTRTFRHHAGQEKGGRR"
     gene            complement(10067..10903)
                     /gene="rplB"
                     /locus_tag="QGG16_07660"
     CDS             complement(10067..10903)
                     /gene="rplB"
                     /locus_tag="QGG16_07660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012229060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HJP25186.1"
                     /translation="MPQRKRKPTSPGRRFQTVADFSEITKTIPERSLTEQENSTGGRN
                     NYGRKTARHRGGGHKQQYRVIDFRRNKDGVPAKVAAVEYDPNRSCRILLLHYFDGEKR
                     YILAPKGVEVGETLQSGQGSEIKPGNALPLRYIPVGTVVHNVELQPEGGGKMARSAGA
                     SVQLVAKEGDYATLRLPSTEMRRVRIDCRATVGEVGNQEHELIKIGKAGRNRWKGVRP
                     QSRGVAMNPVDHPLGGGEGKSSGGRHPVSPWGKPEGRTRKQGKQSDKLIVRRRRRRGS
                     RR"
     gene            complement(10908..>11089)
                     /locus_tag="QGG16_07665"
     CDS             complement(10908..>11089)
                     /locus_tag="QGG16_07665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012229061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_component: GO:1990904 - ribonucleoprotein complex
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HJP25187.1"
                     /translation="EIRDAVESIFDVKVLKVNTLNRAGKRKRNRRMPTFGKRPDVKRA
                     YITLAEGDSIELFEV"
BASE COUNT         1857 a         3645 c         3463 g         2124 t
ORIGIN      
        1 cacgcaccac cacgtcgacc ttgcggacac catgttccat ggcccgccgg gcgcactctt
       61 cggccgccat ctgagcagcg aacggcgtcg acttgcgcga acccttgaag ccaacgtttc
      121 cggcagaggc ccacgccaga gtgttcccgc cctggtcggt gatggtgatg atcgtgttgt
      181 tgaaggaact cttgatgtgc gcaacgccat gggggacgtt cttgcgttcc ttcttgcggg
      241 gacgtcggcc cccagcgctc ggcttcgcca ttacttcgtg acctgcttct tgttcgcgac
      301 tgtcttgcgg gggcccttac gggtccgggc gttggtgtgg gtgcgctgtc cgcggaccgg
      361 aaggccacga cgatgacgca ggccctgata gcaaccgatg tccatcttgc gcttgatgtt
      421 ctgggagacc tcacgccgga ggtcgccctc gaccttgaac tgctggtcaa cgaacgcccg
      481 gatcgccgtg acctcgtcat cggtgagatc acggactcgg gtggtggggt cgacgccggt
      541 gccctcgcag atgttcagtg cggaggtgcg gccgatgccg tggatgtaag tcaacgcgat
      601 caccacccgc ttctcgcggg ggacgtcgac gcctgagata cgtgccatga gatgcttcct
      661 ctaaccctga cgctgcttgt gacgggggtt gctgcagatg acctgcacac gtccatgacg
      721 ccggatcacc cggcacttgt cacagatgcg cttgacgctc gctcggacct tcatgcttgt
      781 tctcttctgc tcttcgtgac ggctacgggt agcggttact tgtagcggta ggtgatccga
      841 cctcgttgga ggtcgtacgg ggtgagctcc acctggacct tgtcgccagg aaggatgcgg
      901 atgtagtgca tcctcatctt tccggagatg tgggccagga cgttgtggcc gttctccagt
      961 tcgacgcgga acatggcgtt gggcagcggt tcgagaaccg ttccctccat cacgatcgca
     1021 tcttccttgg gcttcgacag tgtggtgctc ctggttgatt tcggacttgg tgggcggatg
     1081 ttgggtgagt tggtggatgg gaatccgccg gacccgatgt cgggggctgc tccaaagggc
     1141 gcacacccgg ctcaggccag tggacaacgc tatcgggggc cctccggggg gccaacccgc
     1201 gacccgttgg tatggcggac agaacgactg gtcatcaggc tcccggggcg catctgacag
     1261 gcatccccga ccgcgtccct ctggcgtctc cgacacggag gcgaccgtcg atgaccgagg
     1321 tgaggcggtc gaacacagtc tcctcgtcgg ccaggccatc gaccacgtca agcaggtcat
     1381 gctcggcgaa ccaggctagg agcggcgctg tctcggattc atagaggtcg aggcggcggc
     1441 ggatgccctc ctcggtgtca tcagcgcggc cacgggcaac catgcgtgcg gtgacctcat
     1501 cgaccgggac atcgaggttg accgcaacgt ccaacggcgt gccagcctcg gccaggaagc
     1561 cctccagcgc ggtggcctga tccggggtgc ggggatagcc gtcgagcagg aagccacgtt
     1621 cgaccacgtc gccctccacc aggcgttcgg ccacgatcga gttgatgagg tcgtcgccca
     1681 ccaggtcccc cgcgtccatc agcgccttgg cctggagacc caactcggtt ccggcggcca
     1741 ccgcagcacg aagcatgtct ccggtggaaa tgtggactgg tccgtaggcc tcgaccagac
     1801 gccccgcctg ggtccctttg ccggatccct ggcggccgag aatgacgagt cggacggagg
     1861 tcatctactt gaggaagccc tcgtagttgc gcatcgtgag ctgcgaatcg acctgcttca
     1921 tcgtctcgag cgacacgccc gccgcgatga gaatcgagat accgatgaag ccgaagccag
     1981 ccgcgccacc cgaaccaaca ccagcactgg tgtccaggaa gatgttgatc aagatcgacg
     2041 gcacaagggc cacaccggcg atgaacaggg ccccgggcag cgtgatgcgg gacagaatcc
     2101 tggccaggta ccgctcggtc tggtgaccgg gccggatgcc gggcacgaaa ccaccctgct
     2161 tgcggatggt gtcggcctgc ttcaccgggt cgaaggtgat cgccgtgtag aagtaggcaa
     2221 agccgacgat cagcagcccg gtgatggtga agtagaagac gttgtccggc tgggccaggt
     2281 tgttgtcgat ccagccccga aaaccgtccc acggaagggc cgcagccacc aggaccggca
     2341 ggtaaagaac cgacgaggcg aagatgatcg ggatcacgcc cgactggttg accttcaggg
     2401 ggatgtaggt gttctggccg ccatacatcc ggcgccccac cacgcgcttg gcgaactgca
     2461 cggggatgcg gcgctggccc tgctcgacga acacgatggc cgccaccatc agcatcagga
     2521 aggccaggac gaccaacgag acaatggccc cattctctgc ctggatcaac gaaccctgcg
     2581 ccgggaagcc acttacgatc gagatcatga tcagcagtga catgccgttg ccgatcccct
     2641 tctgggtgat caactcgccc atccacatca gcagtgccgt tccagcggtc aaggtcaata
     2701 cgacgacgct gaccgtgccg atgtgaaagt cgggcagcag attcgcacct gactggccgg
     2761 agatggagtt gccctggtcg ttgaacagga aggcaaagct cgtggactgg atgacggcga
     2821 tggccaccgt cagatagcgg gtccactggg tgatcttgcg ctggccgacc gctccctgct
     2881 gctgccactg ctcgatgcgg ggcacaacca cgccgagcac ctgcatgatg atcgaggcgg
     2941 tgatgtaggg catgacgccc agtgcaaaca cggcgaaact ggtcagtgac ccgccggaaa
     3001 agagttgcag gaaggcaagc acgccgccct ggtcagcacg atcgcgcagc aactgcacct
     3061 gctcgacgtc gatgcccgga gcgggcatga acgcgccgat ccggtagagc aggatcatga
     3121 gaagggtgaa gacgatccgc tttcgcagat cggcaacccg gaacatgttc agcatgctgg
     3181 acagcacgtg gactcctgtc gcctatcgga tcgagaccga gatggatcgg gttagcggtt
     3241 catcagcgcg ttaccgctgg ctgcgggacg tactgcgaag gggagcggaa gcttctcgat
     3301 ggtcccaccg gcagccgtga tagccgcctc ggccgacgcc gagaaggcgt gggccttcac
     3361 ggtgaccgca cgagtcaact cgccacgacc cagcaccttg accaacgact tcttgccgac
     3421 caagccctga gcgtgcagcg cctcgggcga tacctcgtcg aggccacact cctggatggt
     3481 gtctaggttg accgcctggt actccacgcg gaacgggttc ttgaagccct tgagcttcgg
     3541 aatccgctgg tggagaggca tctggccacc ctcgaaacca acgcggacgg tgttacgggc
     3601 ccgctggccc ttgctaccgc gaccggcggt cttgccaccc ttcccgccga tacctcgacc
     3661 aacacgcttg gcccgctttg tggagccggg agccggctgt agatcatgaa ccttcatgtc
     3721 actcagcctc cccggccagt tcctccaccc ggaccagatg cggaacccgg gcaatcatgc
     3781 cccggatctc accacggtcc ggcagagtgt tgcttcgtcc gatccggccc aagccgagag
     3841 ctcggagcgt gccccgctgc ttgggcttgg cgccgatggc gctgcggatc tgggtaacga
     3901 ccaactgggt catgtcactc accgtcccgc agtgtcgtct gagccgacgc cgacgccggc
     3961 ctcggtacga cggtacgcct caagcagggc acctggcacg aactcctccg ggtccaagcc
     4021 acgcaggcgg gcgatctcgt cgggccgtcg cagccccttg aggccggcga tggtggcccg
     4081 ggccacgttg atgtggttgg acgacccctg tgacttgcac aggatgtcgt ggatgccagc
     4141 ctcttcgaga atggcacgag cagcgccacc ggcgatgacc ccggtaccag gagcggcagg
     4201 cttcaacatc acccgcccgg cgcccatgac gccgaggatc gggtggatga tggtcgaacc
     4261 agtcagcgcc accttgaaca ggtttcgctt ggcctcctca gtccccttct ggatggccag
     4321 cggaacctcc ttggccttgc cgtagcccag gccgacccgg ccagcgccat caccgatcac
     4381 cacgagcgcg gtgaacgaga accgacggcc gcccttgacc accttggcca cgcggttgat
     4441 gtggatgacc cgcgactccc tgagggaggc atcgtcatta ttgtgctgtg ccactagaac
     4501 tccagtccgg cttcgcgggc agcatcggcc aacgccgcca ccctgccgtg gtacttgtat
     4561 ccgcctcggt cgaagaccac cgacgcgatt ccggcttcgc gtgctcgctc agcgaccacc
     4621 cgtccgacct cggtggcggc agccaccccg gtcacaccct cggccacacc gtcctgaacg
     4681 gtcgatgccg cggccacggt gcgacccgaa cggtcgtcga tgacctgggc tgagatatga
     4741 cgagccgaac ggaagaccgc aagacgggga cgggactccg agccccggac cgatttgcgg
     4801 acccgacggt gtcgacgctg acgcgccttg gaacgatcca ggctgctcac ttggctgcct
     4861 ttccggcctt gcgggccacg tgctcgccga ggtaccgcac gcccttgccc ttgtagggct
     4921 ccggcttgcg atacgaacgg atgttggcgg ccacctggcc gacaacctgc ttgtcagtgc
     4981 ctgacacgat gatgcgtgtc ggttccggca cgtcgaacga gatgccgtcc ggagcctcga
     5041 cgttcaccgg atgactgaat ccgagctgca gctccaaggc gtttgtgccc ttggccgctg
     5101 ctcggtagcc gacgccgacg atctggagtt ccttggagaa cccctcggtc acgccgacca
     5161 ccatgttgtt caccaacgac cgagtcagac cgtgcagggc acggttctga cgttcatcat
     5221 cggggcgctc cacgaggagc acctcgccgt cctgacggac ggtgatgtca ccgggaacct
     5281 cgatgtcgag ttcgcccttg ggacccttga cggccagctg gcgaccctgg atctggacct
     5341 cgacaccgga cggaacggtg ataggagcct tcccgattcg ggacatgtcg tctccttccc
     5401 taccagacgt agcagagcac ctcgccaccg atccttcggc ggcgggcctc gcggtcgctc
     5461 ataagtccgc ggctcgtgga gatcacggcg acgccgagac ctccgagcac gcggggaatc
     5521 cggttggagg cgctgtacac gcgaaggccg ggcttggaga cccgcttcac gccgctgatg
     5581 acgcgctccc gctcggggga gtacttcatc tctatgttca acacctggcc ggggccagtc
     5641 ttggcctccg acaccgcata gtcgcggata taaccctcgg acttgaggat gtcagcgagc
     5701 gccaccttct gcttcgacga cggcatattg acgccttcgt gcatcgccac gttggcgttg
     5761 cgaatgcgcg tcaacatgtc agcgacggga tcggtcatgg tcatgtcaga ccctcctcac
     5821 cagctcgact tcgtgagccc ggggatctct cccgcgtggg ccatgctccg caggcagatc
     5881 cggcagaggt tgaaggcgcg gtagaccgaa cgcggtcggc cgcaacggcg acaccgcgta
     5941 taggcccgaa ccttgaactt cggggtcttc tgctgcttgt tgaccagtgc tttcttagcc
     6001 actactgccc ttccttccgg aatgggaaac caaacgccgc gagcagggcc cgcccttcgg
     6061 cgtcatcgga cgcagacgtc acaatcgtga tgtccattcc ccgggtgcga tcgaccttgt
     6121 cgtagtcaat ctccgggaag atcaattgtt cggtcacgcc gaacgtgtag ttaccgctac
     6181 cgtcgaacga cttcggactg agcccgcgga agtcacggat acgggggatc gccagagtga
     6241 tcaggcggtc caggaactcg tacatgcggt cgccccgcat cgtgaccttg gccccgatgg
     6301 gctggccctc gcggagcttg aagttcgaga tggacttccg ggcccgagtc accatcggtt
     6361 tctggccggt gatggcctcc agatcggtca gtgcaccatc cagaagcttc gcctgctggg
     6421 cggcgtcacc gacacccatg ttgacgacga tcttggacag cctcggaacc tgcatcacgt
     6481 tggcgaggcc cagctcggtc tgtaccgcgc tccggatctc gtcgttgtaa cgcacacgca
     6541 tccgcaccgc tgcggtggta ccggagtcag aaatgagtgt ctcagccatc gatgtccacc
     6601 cccgtgcgtt tgcagatccg gaccttgtcg ccggtctcag tgaatcggta cccgatgcgg
     6661 gtcggcttgc cgtccgacgg gctcaggatg gccacgttgg acacgtgtag tggcatcgcc
     6721 ttttcgatga tgccgccctg gtccgtagcg ctcgtgggct tctggtggcg tttggcgatg
     6781 ttgatgccgt ccacgatgac tttgtcatca gcggggatgg ctcggctcac cttgccctcc
     6841 ttgccctcat ccttgccggc caggacccgc accttgtctc ctttgcgaat cttcatctca
     6901 gagcacctcc ggcgccagcg acacgattcg catgaacttg tggtcccgta gctctcgccc
     6961 gactgggccg aagatgcggg tgcctcgagg ctggttctgg tcgttgataa gcaccgccgc
     7021 gttctcgtcg aaccggatgt agctcccgtc cggacgacga cgttccttct tggtccggac
     7081 gacgacgcac ttgacgacct cacccttctt gacggccgca ccgggattgg cgtccttcac
     7141 cgtcgcggtg aaaatgtcgc cgatcgaggc gtaacgacgc ttggagccgc ccagcacctt
     7201 gatgcagagc acctcgcggg cgccagagtt gtccgcgacc cggagtcggg tctcctgctg
     7261 aatcattact tcgccctctc gaggatctcg accaaacgcc agtgcttcaa cttggacagc
     7321 ggtcgggtct cctggacccg cacgcggtcg cccacgctga gctggttgtc ttcgtcgtgg
     7381 acgtggagtc gcttggtccg ctggaccgtc ttggcatacc ggcgatgccg gacgcggtcg
     7441 acagtctcga cgatcgccgt cttgtcctga acatcagaga ccactagacc ctcacgcacc
     7501 ttgcggcggt tcggacgttc ggtcgtttcg gtcgtctcgg ccatcagtcg gccacctcct
     7561 cgccgccggc cacaatggcc tcggcagcgt cgatttcacg ggctcgcagc tcagtcagca
     7621 tgcgggccac ctcttttttg acctgcccga ccctcgcgta gttctcgagc tggccggtta
     7681 ccaactggaa gcgcaagttg aacaactctt ccttggcgtc ggacagacgc tctaggaggt
     7741 cagtgtcacc gagggtgttc agggtctctt tcttcgccat ggctagaagc cctcctcacg
     7801 ctcgacgaag cgtgccttga tgggcagctt ctgaatggcg cggtcgaggg cctcgcgggc
     7861 cacgaccgcg tcgctgtacg acagttcgaa caggatccgt ccgggcttga ccaccgcgac
     7921 ccacttctcc gggttgccct tgccggaacc catgcgggtc tcagccggct tctcggtgat
     7981 gggcttgtcc gggaagacgt tgatccacac cttgccgcca cgcttgatgt gacgggtcat
     8041 ggcgatacgg gcagcctcga tctggcgggc ggtgatccaa cccggctcaa gagcctggat
     8101 tccgtactca ccgaacgtca tctcggtctg gcccttggaa ttgcccttga ggcgaccgcg
     8161 gtgctgcttg cggtgtcgaa ccttcttcgg catcaacacg gctcagtcac catccccacc
     8221 gcggaagtgc ggcgtctcgt ggttctcctt ggtggatgcc tcaatggcct cctcctcagc
     8281 gagcagcttt tcgaactcgg cgtcaccctc cttgactagc ggcgccggat cagcctcggt
     8341 gacctccggc gcagggggct cggtggccgc cacctcagca gcctcggggc gccggggggc
     8401 ggcagccgag gacaccacgg tgcgaggctt ggtctggccg gaggtctcac cgacggccat
     8461 ggccgcctcc ttggtgatct tgtcctcaag cacgctcttg tagggcagga tctcgccctt
     8521 gtagatccac accttcacgc cgatgcgacc gtatgtggtg cgggcctcac gaaagccgta
     8581 gtcaatgtca gccctcagcg tgtgcagcgg gacccgacct tcgcggtacc actcggtccg
     8641 ggacatctcg gcgccaccga ggcgacccga gcactgcacc cggatgccga gagcgccagc
     8701 cttctgggcg ttctggacag cccgcttcat ggcgcgacgg aaagcgacac ggccagccaa
     8761 ctggtcggca acgccctggg cgatcaacgc agcctcgagc tcgggctcct tgatctcctg
     8821 gatgttgagc tggacctgat ggttgccact gatcttggtc agcccggaac ggaggcggtc
     8881 agcctccgaa cccttacgcc cgatgacgat gcccgggcgg gccgtgtgga catcgatccg
     8941 caacttgttg ctggtccgct cgacctcgat ccggctgatc gccgcgtgcg ccagatcctc
     9001 catgatgtac tcgcggatct tccagtcctc aaggacgttg tcggcgtact cctttcggct
     9061 ggcaaaccac cgcgacttcc agtcggtggt gacccccaga cggaagccgt acggattgac
     9121 cttctggccc atcagttgga ctcctcttcg tcctgctgct cttcggcctg ctcggcaacc
     9181 tgctcttcgg cctgctcggc aacctgctct tcggcctgct cggcgacggt gacctctgcc
     9241 tcaacggttt ccacggcctc gacctcatcg gcgtggtcgt ggtcgtggtc gtggtcgcta
     9301 gcttcctcag cggccgcacg gctgcgctcc acacgctgac gacgggcctc cgcggcatgg
     9361 gcgctcgacc ctgcctggcc cttggcctcc tcgcgctcgc gccggtcggc gagcgtggca
     9421 tcgtcgtagc gactcacgat catcgtgatg tggctggtgc gcttgaggat ctgcgtggcg
     9481 cgcccacgtg cacgagggcg ccagcgcttc agcgtcgggc cctcgtcggc gtagcacgcc
     9541 gacacgaaga gttcttcggc cggaatgttg tcgttgttct cggcgttggc cactgccgaa
     9601 tccaggcact tgccgatcac ctcagacacc gatcgctcgg agaaggcgag gatctcggac
     9661 gcacgaccgt aggactcgcc ccgcacgagg tccagcacgg cacgggcttt actcggtgac
     9721 acacggacgt acttcacgac cgcacgcgtc cctggacgct cgttggtctt caggccggtc
     9781 attagcgacg accacccttc tcctggccgg catggtgccg gaaggtccgc gttggagcga
     9841 actcgcccag cttgtggcca accatcgact cggtgatgta caccggcacg tgcttgcggc
     9901 cgtcgtgtac acccatcgtg tgtccgacca tgtcgggcac gatggtggac cgacgggacc
     9961 acgttcgaat gaccttcttt tcgccggact cgttaagtac gtccaccttc ttgagcaggt
    10021 ggtcgtccac gaacggaccc ttcttgagac tcctcggcat cgccgattac ctccgcgatc
    10081 cacgccgacg acgacggcgc acgatcaact tgtcggactg cttgccctgc ttacgggtac
    10141 ggccttcagg cttgccccag ggtgacaccg ggtggcgacc acccgaagac ttaccttcgc
    10201 caccgcccag agggtggtcg accgggttca tggcaacacc acgggactgc gggcggacac
    10261 ccttccagcg gttgcgaccg gccttgccga tcttgattag ttcgtgctcc tgattgccca
    10321 cctcaccaac cgtggcccgg cagtcaatgc ggacacgccg catctcggtg ctgggaagtc
    10381 gcagggtggc gtagtcaccc tccttggcca ctagttggac gctggcaccg gcactgcggg
    10441 ccatcttgcc gccgccctcg ggctgcagtt caacgttgtg cacgaccgta ccgacgggga
    10501 tgtagcgcaa cggcagggcg ttgccgggct tgatctcgct gccctggccg gactgcaggg
    10561 tctcgccgac ctcgacgccc ttgggggcga ggatgtagcg cttctcgccg tcgaagtaat
    10621 ggagcaggag gatgcggcaa ctccgattcg ggtcgtactc gacggccgcc accttggccg
    10681 gcacgccatc cttgttgcgg cgaaagtcga tgacccggta ctgctgctta tggccgccgc
    10741 cgcggtgacg ggcggtcttg cggccatagt tgttgcggcc accggtgctg ttctcttgtt
    10801 cggtcagcga ccgctccggg atcgtcttgg tgatctcaga gaagtcggcg acggtctgga
    10861 accgccggcc gggactggtg ggcttgcgct tgcgctgcgg catgttccta gacctcgaac
    10921 aactcgatcg aatcaccctc ggcgagggtg atgtatgccc gcttgacgtc cgggcgctta
    10981 ccgaacgtcg gcatgcgccg gttccgcttg cgcttgccgg cccgattcag ggtgttcacc
    11041 ttgaggacct tcacatcgaa gatcgactcg acggcatcac ggatctcag
//
LOCUS       DASCMR010000319         1536 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001556948, whole genome shotgun sequence.
ACCESSION   DASCMR010000319 DASCMR010000000
VERSION     DASCMR010000319.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1536)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1536)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1536
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001556948"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..>1536
                     /locus_tag="QGG16_07670"
     CDS             <1..>1536
                     /locus_tag="QGG16_07670"
                     /inference="COORDINATES: protein motif:HMM:NF015168.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF255 domain-containing protein"
                     /protein_id="HJP25188.1"
                     /translation="GWPMTVFCHPDGRPFHGGTYWPDQPRGGMPSFPQVLDAVTTAWT
                     TRRDDLDGLGDRLTASMARHGDLPAAEAPPPPDVMTTAVGHLSDQHDDEWGGFGGAPK
                     FPQAMSLEALLRHLSARHAAGKADRRAVEVATTTLDAMASGGMYDQLAGGFARYSVDP
                     WWLVPHFEKMLYDNALLARTYLHGWRVLGHQRWLQVATETIDYVLADLRHPDGGFFSA
                     EDADSEGAEGTFYVWSEDEIREVCENLGQGVAKSAIEWYGVTGNGNFEGANILHRPVR
                     GDLIRPEPVERARRALLDRREQRIRPGLDDKVLTEWNGLMLATLSEAAMTVGQEDWLD
                     AARSNADFLCRTLRRDDGRWLRSWQANAGAHTLGYAADHAAMVDGLTRLGEASGEARW
                     TETAVSTADVLLDRFLDVDHGGFHSTGHDAEALVRRPKDLMDNAQPSANSLAAVALLR
                     LGALVGDARYTEAAEGVLRLLGEQTGAHPTAFGHLLGAADLFHAGITEIVVTGDRPDL
                     VVAA"
BASE COUNT          256 a          510 c          509 g          261 t
ORIGIN      
        1 ggctggccta tgacggtgtt ctgccatcct gacggccgcc cgttccacgg tggcacctac
       61 tggccggacc agccccgggg cggcatgccg tccttccccc aagttctgga tgctgtgact
      121 acggcatgga cgacccggcg cgacgatctg gacggtctag gtgaccggct caccgcctcg
      181 atggcccgtc acggcgatct tcccgcagct gaggctcccc ccccacccga cgtcatgacc
      241 accgctgtcg gccacctgag cgaccagcac gacgatgaat ggggagggtt cgggggcgct
      301 cctaagttcc cgcaggccat gagcctcgaa gccctgcttc gacacttgtc ggcccgtcat
      361 gccgccggga aggcggatcg acgggccgtc gaggtggcca ccaccacgct ggatgccatg
      421 gcctcaggcg gcatgtatga ccagttggcc ggcggttttg cccgctactc ggttgacccg
      481 tggtggctcg ttccccactt cgagaagatg ctgtacgaca acgccctact ggcccggacc
      541 tacctccacg ggtggcgggt tctgggtcac caacggtggc tgcaggtagc caccgagacc
      601 atcgactacg tgttggctga tctgcgccat ccggacggtg ggttcttctc agctgaggat
      661 gccgattcag agggcgccga agggaccttc tacgtctggt ctgaggacga gatacgagag
      721 gtttgcgaga acctggggca aggtgtggcc aagtcggcca tcgagtggta cggcgtcacc
      781 gggaatggaa actttgaggg ggcgaacatt ctccaccgtc ccgtcagggg tgacctgatt
      841 cgacccgaac ctgtcgaacg agcccgccgg gcactgctgg accgccggga gcagcggatc
      901 cgtcccgggc tggacgacaa ggtcctcacc gaatggaacg gtctgatgct ggccacgctc
      961 tcagaggcgg ccatgactgt gggccaagag gactggctcg atgccgcacg gtccaatgcc
     1021 gacttcctgt gtcggacgct acgtcgtgac gacggacgct ggctgcgatc gtggcaagcg
     1081 aacgctggcg ctcacacgct cggttacgcg gcggaccacg ctgccatggt cgacggcctg
     1141 acccgtctcg gcgaggcctc gggagaagcg cgctggaccg aaacagccgt gtcaactgca
     1201 gacgtgctgt tggaccgttt tctggacgtc gaccacggtg ggttccactc caccggacac
     1261 gacgccgagg ctctggttcg gcgtcccaag gacctgatgg ataacgccca accatcagcc
     1321 aacagcctcg ccgctgtggc cctcctgcgc ctcggggccc tggtgggcga cgcccgctac
     1381 accgaggctg ctgaaggcgt actgagactg ctgggcgagc aaacgggcgc gcaccccacg
     1441 gcgttcggcc acctcctggg agccgccgac ctgttccacg ccgggatcac cgagatcgtg
     1501 gtgaccggtg accgacccga cctggtggtc gcggcg
//
LOCUS       DASCMR010000320         1639 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001557055, whole genome shotgun sequence.
ACCESSION   DASCMR010000320 DASCMR010000000
VERSION     DASCMR010000320.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1639)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1639)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1639
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001557055"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..379
                     /locus_tag="QGG16_07675"
     CDS             <1..379
                     /locus_tag="QGG16_07675"
                     /inference="COORDINATES: protein motif:HMM:NF015146.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="uracil-DNA glycosylase family protein"
                     /protein_id="HJP25189.1"
                     /translation="TDVFITAPVKCAPPANKPTPDEKAACRSFFEREVTALAAVKVVV
                     VLGQIGYVAAASEFGLRPRPTFGHGVESPLDGGRTILCSYHVSQQNTFTGRLTEPMFD
                     AVLVRAIELAGAGGPGSSTGDRR"
     gene            390..749
                     /locus_tag="QGG16_07680"
     CDS             390..749
                     /locus_tag="QGG16_07680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25190.1"
                     /translation="MKSSSRIRRLLPLVAVVLVATACVASGEPVSWEDQADASGDGLV
                     EREFVAACVEANDDLGSVKAKAFCGCVLDGIQSEVSFEKFRELDAFIDDQRDTVTRDM
                     LVEHYGWFVDISDDCGA"
     gene            complement(808..>1639)
                     /locus_tag="QGG16_07685"
     CDS             complement(808..>1639)
                     /locus_tag="QGG16_07685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Coenzyme F420 hydrogenase/dehydrogenase, beta
                     subunit C-terminal domain"
                     /protein_id="HJP25191.1"
                     /translation="LLTRASDAGVHQMGQDGGLVSAILIWCLDNGIIDGALTSHLEPE
                     GPDGSSSWKAVPAVATDRASVLAGAGSRYTYSANTLAMPEALDRGLSSLALVGMSCQT
                     SIGPVMWHRKVGKAGKPIKLNIGLLCSKSFDDAIFEELFWAKYRLRKEDMVKMNIKGV
                     FQIWMRNGDYHEINLKECHAWTREGCTHCPDFAAEHADISTGGIGENNDWTLTIVRTE
                     LGRQVIMGMLADGVIEGRPGDSDPGAIALMHKLAAKSRDRWPDWANPTARVGLPVRAV
                     "
BASE COUNT          237 a          527 c          569 g          306 t
ORIGIN      
        1 gaccgacgtg ttcatcacgg cgccggtgaa gtgcgcgccg ccggccaaca agcccactcc
       61 cgacgagaag gcggcgtgtc ggtcgttctt cgagcgtgag gtgaccgcct tggcggcggt
      121 gaaggtcgtg gtggtcctcg gtcagattgg gtacgtggcc gcggcgtccg agtttggcct
      181 acgaccccgg ccgacattcg ggcacggggt ggagtcaccg cttgacggtg ggcgcacgat
      241 cttgtgctcg taccacgtga gccaacagaa cacgttcacc ggtcggctca ccgagcccat
      301 gttcgacgct gtgctggtcc gggcgatcga gttggccggc gccggtggac cggggtcgtc
      361 aaccggcgac cgccggtagc ctctgggccg tgaagagctc ctctcgaatc cgtcgcctcc
      421 tgcccctggt ggccgtcgtc ctggtggcca cggcgtgcgt ggcctccggt gagccggtgt
      481 cctgggagga tcaggccgac gcttccggcg acggtctagt ggagcgtgag ttcgtggccg
      541 cctgcgtgga ggccaacgac gacctgggtt cggtcaaggc caaggcgttc tgtggctgcg
      601 tgctggacgg catccagtcc gaggtgtcct tcgagaagtt ccgtgagttg gatgccttca
      661 tcgacgacca gcgggacacc gtgacccggg acatgctggt tgagcactac ggctggttcg
      721 tcgacatctc cgacgactgc ggcgcctgac ccgacccccg cgggcccgtc gatccgtcgg
      781 gccccgctca ggcttagccg gttcgtttca gactgcccgg acgggtagtc cgacccgggc
      841 cgttggattg gcccaatccg gccaccggtc tcggctcttg gccgccaact tgtgcatgag
      901 ggcgatggcc ccggggtcgc tgtcgcccgg ccggccctcg atgacgccgt cggccagcat
      961 ccccatgatg acctgacggc ccagttcggt ccgcacgatg gtcagcgtcc agtcgttgtt
     1021 ctcgccgatc ccgccggtgg agatgtcggc gtgttcggcg gcgaagtccg gacaatgggt
     1081 gcagccctca cgggtccagg cgtggcactc cttgaggttg atctcgtggt agtcgccgtt
     1141 ccgcatccag atctggaaga cacccttgat gttcatcttg accatgtcct ccttccggag
     1201 gcggtacttg gcccagaaga gctcctcgaa gatggcgtcg tcgaacgact tggagcacag
     1261 cagaccgata ttgagcttga tcggcttgcc ggccttgccc accttgcggt gccacatcac
     1321 cggcccgatg gatgtctggc agctcatgcc gaccagggcg agcgaggaga ggccacgatc
     1381 cagggcttcg ggcatggcca aggtgttggc cgagtaggtg tagcggctgc ccgccccggc
     1441 cagcaccgag gcacggtcgg tggccaccgc ggggacggcc ttccaactgc tagatccgtc
     1501 aggaccctcg ggttcaaggt ggctggtcag cgcgccgtcg atgatgccgt tgtctaggca
     1561 ccagatgagg atggctgaca ccaggccgcc gtcctggccc atctggtgga cgccggcgtc
     1621 actcgcccgg gtgagcagg
//
LOCUS       DASCMR010000321         1522 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001559746, whole genome shotgun sequence.
ACCESSION   DASCMR010000321 DASCMR010000000
VERSION     DASCMR010000321.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1522)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1522)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1522
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001559746"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            62..>1522
                     /locus_tag="QGG16_07690"
     CDS             62..>1522
                     /locus_tag="QGG16_07690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25192.1"
                     /translation="MSLIPPTSADALQAELATRSGRIRPAAYVMRPDVLGAARLSRYS
                     FSRTMLRRAVADGWTAGRVHQDLDAEGRGETIYFVDAGTKRFSFVVFTTTIDESAHTD
                     RVIADRWEVAGALVEGDVDDDLLARLRIEVPEQESGRMDPRVLSLTRGNRSVRFFGYL
                     VDELAAGRQPDPDRVGDAGYILRSTAFYANGKFGMRSFAGYPGDHPFRVPYRAQFVAA
                     WMFRELGYDMVEHCARAKGGDTAVGFDGQWRRYFGLGNATGLGLVPYAFKHPRVLDAW
                     VGVREIALADVRERVAAPTDGAVLRGWIAKAREHFASGSNDDCTPFLNSQALVPLLDD
                     VAEAWGRVAAGADPYDALYRWAEDQGPEMSEMVVSLLLELHDGDDDLFDLLFLVDEHS
                     SADPTATVAEVRAKLDERFGWLGELNLDESPADAFWWVVSDNTEEPRRARRDRLAPEG
                     RDVAVDVALRLWRFGKTLEDRHADEPVAVVLADHPEH"
BASE COUNT          239 a          455 c          537 g          291 t
ORIGIN      
        1 gtgttccgcg tggcaggccc gattcgagac cttgcccctt gagaggacat acgctgccgc
       61 cgtgtcgttg attcctccga cgagtgcaga tgcgttgcag gccgagttgg cgacccgctc
      121 cgggcgtatt cggccagcgg cctacgtgat gcgacccgat gtgctgggtg ccgcacgtct
      181 cagccgctac agcttcagcc ggaccatgct ccgccgggcg gtggctgatg gttggacggc
      241 aggtcgggtt catcaggacc ttgatgctga gggtcgtggg gaaacgattt acttcgtgga
      301 tgccggtacg aagcggttca gtttcgtggt gttcacgaca acgatcgacg agtccgccca
      361 caccgatcgg gtgattgccg atcggtggga ggtggctggg gccctcgtgg agggggacgt
      421 cgacgacgat ctgctggccc gacttcgcat cgaggttccc gaacaggaat ccggtcgcat
      481 ggacccgcgg gtcctgagtc tgactagggg caatcgcagt gtccggttct tcggctacct
      541 ggtcgacgag ctggccgccg gccgtcagcc cgaccccgac cgggtgggtg atgccggcta
      601 catcctccga agcacagcgt tctacgccaa cggcaaattc ggaatgcgct cgttcgctgg
      661 ctacccgggc gaccacccgt tccgggtccc gtatcgggcc cagttcgtgg ccgcctggat
      721 gtttcgggaa ctcggctacg acatggtgga gcactgcgcc cgcgctaagg gtggtgacac
      781 agcggtcggg ttcgatggcc aatggcgccg ctactttggg ctcggaaatg ccacgggtct
      841 cggtctcgtg ccgtatgcct tcaagcaccc gcgggtgctc gatgcctggg tcggggtgcg
      901 ggagatagcg ttggctgacg tgcgtgagcg ggtggccgca ccgacagacg gggcggtgct
      961 ccggggatgg atcgccaagg cccgggaaca cttcgcgtcg ggatccaatg acgactgcac
     1021 gccgttcctg aactcgcagg ctctggtccc gcttctggat gacgtcgccg aggcgtgggg
     1081 ccgtgtggcc gctggagcgg acccctatga cgccctctac cgatgggctg aggaccaggg
     1141 cccggaaatg tcggagatgg tggtatcgct tcttttggaa cttcatgacg gtgacgacga
     1201 cctgttcgac ctgctcttcc tcgtcgacga gcactcctcg gctgacccga cggccacggt
     1261 ggcagaggtc cgggcgaagc tcgatgaacg gtttggatgg ttgggtgaac tcaacctcga
     1321 cgagtcgccg gctgacgcct tctggtgggt ggtcagcgac aacaccgagg agcctcgacg
     1381 agcccgacgt gaccgactgg cccctgaggg gcgggacgta gccgtcgacg tggcgctacg
     1441 tctctggagg tttgggaaaa cgttggagga ccgacatgcc gacgagccgg tggccgttgt
     1501 tctggccgac cacccggaac ac
//
LOCUS       DASCMR010000322         2062 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001565251, whole genome shotgun sequence.
ACCESSION   DASCMR010000322 DASCMR010000000
VERSION     DASCMR010000322.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2062)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2062)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2062
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001565251"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(112..1119)
                     /locus_tag="QGG16_07695"
     CDS             complement(112..1119)
                     /locus_tag="QGG16_07695"
                     /inference="COORDINATES: protein motif:HMM:NF014653.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ldh family oxidoreductase"
                     /protein_id="HJP25193.1"
                     /translation="MSDTTPATLEVTLDEVEETTRRSLIRHGAGHDVSALVARAVRVA
                     EGNGNRICGLYYLESYCLQLESGRIDGVAEPVVTNDRPGAVRVDGRLGFAQAAFATGF
                     PTAVDAARSNGICGMSVEHTHTCTSLGYFTEQFAREGLLAIGATNASPRVSPPGGSVP
                     VLGTNPIAMAVPDGGGGIALQFDFSTSAVALGKITMAAAAGEEIPLGWAVDAEGIPTS
                     DPEAALAGSLVSAGGYKGYGISLMVELLAGAMTGCRLSADVPPLKTTDGQPHDLGQFY
                     IVIDPTSYSGRGFHDRLKALGESIASQPGARLPGAGRVPSDPVTVEGPVWARALELAG
                     D"
     gene            1167..>2062
                     /locus_tag="QGG16_07700"
     CDS             1167..>2062
                     /locus_tag="QGG16_07700"
                     /inference="COORDINATES: protein motif:HMM:NF013044.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HJP25194.1"
                     /translation="MGSGVRLSGDLAEVLSRCTGTSATGHSLPAACYVDPDVAALEAE
                     VIFRQGWVGVGRSDRWPGTGDYAAIDLGGVPVVVVRDDEGVLRAYANTCRHRSTQVMD
                     GEGHCTRMRCPFHFWTYGLDGRLLGAPSMQKAEDFDRDEHGLHEFAVTERHGFAFVSL
                     EASPPSIDYWLGDFGVIHARWDLASLVTTRRREFTVDCNWKEFAEVFNEYYHLPYVHP
                     GSINDTYDDPDEPEDVVGAWSTHSGTTQGTDGLLETDQAKALPRIGALTDREADGVRY
                     SWLHPTLVIATGAEGMWMYEVYP"
BASE COUNT          344 a          642 c          714 g          362 t
ORIGIN      
        1 cgcgacggtc tagccgtgga ccgggtcgcc ttcgatgcgt taatcgcggc agctagaccg
       61 ttcctggtgg ccgagtcgat cctggacgag atcgaggact gacgggtcgg gtcagtcacc
      121 ggcgagctcg agggcccgcg cccagacagg cccttcgacc gtcacgggat cggagggcac
      181 ccgaccggcg ccgggaagac gtgcaccggg ctgggacgcg atgctctcgc ccagcgcttt
      241 cagacggtcg tggaaccccc ggccgctgta cgaggtcgga tcgatcacga tgtagaactg
      301 gcccaggtcg tggggttggc catcggtggt cttgagcggg ggcacgtcgg cgctcagacg
      361 gcagccggtc attgccccgg ccagcagttc gaccatgagg ctgatgccgt agcccttgta
      421 gccgccggcc gagaccagcg acccggcgag cgcggcctcc gggtcgctag ttgggattcc
      481 ctcggcgtcc accgcccagc ccagcggaat ctcctcaccg gccgccgctg ccatggtgat
      541 cttgccgagg gccaccgcac tggtggagaa gtcaaactgt aaggcgatgc cgccgccacc
      601 gtcgggaacg gccatggcaa tgggattggt gcccaggacc ggtaccgacc cgccgggcgg
      661 cgaaactcgg ggggaggcgt tggtggctcc gatagccagc aggccctccc gtgcgaactg
      721 ctcggtgaag tacccgagcg acgtacaggt gtgggtgtgt tccacggaca tgccgcagat
      781 cccgttggat ctggcggcgt ctacggcggt tgggaatccg gttgcgaacg ctgcttgggc
      841 aaaaccgagc cgtccgtcca cgcggacggc accgggccga tcgttggtca ccaccggttc
      901 agcgacaccg tcaattcgcc ccgactcgag ctgcaggcag tagctctcca ggtagtaaag
      961 gccgcagatc cggttgccgt tgccttcggc cacacggacg gcccgtgcga cgagagcaga
     1021 tacgtcgtgt ccggctccgt ggcgtatcag gctccgccgg gtggtttcct cgacttcatc
     1081 cagagtgact tcgagagtgg caggcgtggt gtcagacatc cccgaaccgt aggtgaccgg
     1141 gggtccgctg ctcctacaat ccgcgtatgg gttcgggggt gcgactttcc ggcgatctgg
     1201 ccgaggtgct gagccgctgt accggaacgt cggcgaccgg ccattctctg ccggccgctt
     1261 gctacgtgga tccagatgtt gccgcccttg aggcagaagt gatcttccga cagggctggg
     1321 tgggggtcgg tcggagcgac cggtggcccg gcaccggtga ctatgcggca atcgaccttg
     1381 gtggagtccc ggtggtggtg gtccgagatg acgaaggggt cctcagggcc tacgcaaaca
     1441 cgtgccgcca ccgatcgact caggtgatgg acggggaggg gcactgcacc cggatgcgtt
     1501 gcccgttcca tttttggacc tacgggctcg acggtcgcct cctcggcgca ccgagtatgc
     1561 aaaaggccga agacttcgac cgggacgaac acggacttca cgagtttgcg gtgaccgagc
     1621 gtcacgggtt cgccttcgtg agtctcgagg cgtcaccgcc atcgatcgac tactggttgg
     1681 gcgacttcgg cgtaattcac gcccgttggg atctggcttc cctggtgacg acccgtcgac
     1741 gcgagttcac tgtggactgc aactggaagg aattcgccga ggtcttcaac gagtactacc
     1801 acctgccgta cgtgcatccg ggcagcatca acgacaccta cgacgaccct gacgagcccg
     1861 aggatgtggt cggggcgtgg tccacgcact ctggcaccac gcagggcacc gatggtctcc
     1921 tggagacgga tcaggccaag gccctgccga ggatcggtgc actgaccgac cgtgaggctg
     1981 acggcgtccg atactcgtgg ttgcatccga cgctggttat cgccacggga gccgagggga
     2041 tgtggatgta cgaggtgtac cc
//
LOCUS       DASCMR010000323         3659 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001570426, whole genome shotgun sequence.
ACCESSION   DASCMR010000323 DASCMR010000000
VERSION     DASCMR010000323.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3659)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3659)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3659
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001570426"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..350
                     /locus_tag="QGG16_07705"
     CDS             <1..350
                     /locus_tag="QGG16_07705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25195.1"
                     /translation="VATPDHIANVLDRAGFDPTYGDAATDPSWDAELRAETAEAVGRT
                     GDQVGTPIITFGPPDGPSIFGPVISSVPDSDEECLALYDATVTLCRFDTFSELKRSAR
                     PRLDLPVMTGRPG"
     gene            complement(398..1162)
                     /locus_tag="QGG16_07710"
     CDS             complement(398..1162)
                     /locus_tag="QGG16_07710"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025217.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HJP25196.1"
                     /translation="MDGYDSETYGETIAEVYDEWYGVDGGIAITQIGSPSEVADRVNT
                     LAGPAGTVLELGVGTGRLALPLADRGLTVTGLDASPSMLDRLRAKPGADRLTLVAGDM
                     ADPTIAGTGFDVVLVGFNTFFNLTTEATQQACMHGVAETLAPEGRFVLEAFVPAPDTH
                     DGVSVRDVSIDRVMLDVVATNRAAQTITGQRIVMTAAGNRFFPYLLRYATPDQLDAMA
                     DVAGLERVDRTEDWRGTPFSDDSSQHVSTWRRADTT"
     gene            1238..2452
                     /locus_tag="QGG16_07715"
     CDS             1238..2452
                     /locus_tag="QGG16_07715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase family protein"
                     /protein_id="HJP25197.1"
                     /translation="MGVELTNEIPQKRVYLDHAASTPARPEVVAAMLPWLTDHPGNPS
                     GSHAAAREARRAVDDARDHVAVLVGCLPGEVVFTSGGTEADNLAVDGVVRATGGLPVC
                     SAAEHPAVLEPVRDAGGLVVPTDAGGCIDLEALSEVLASVDASPAADAPEMGIALVSA
                     MVANNETGAVTDIDAVAAVVAEHAPDTVVHTDAVQATAWLDLPATVHRAGLVSITGHK
                     FGGPKGAGALVVRAGVPLAPVLRGGGQERERRSGTQNVPAIVGLGEAARLMVVERDAV
                     CQRVGALRNRLEDGLVEAVSGARRTVPDGTPRTPGVAHLCFDGIESEELLFLLERDGI
                     AASAASSCASGAQEPSPVLAAMGIDRVTAAGSLRLSLGWASTGADVDHALAVVPAAVE
                     RLRAHTRSLQSR"
     gene            2449..3561
                     /gene="mnmA"
                     /locus_tag="QGG16_07720"
     CDS             2449..3561
                     /gene="mnmA"
                     /locus_tag="QGG16_07720"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: protein motif:HMM:NF001138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HJP25198.1"
                     /translation="MTDQSHAVSHPLGTQDGGPIGPVMVAMSGGVDSSVAAALLRDAG
                     HEVVGVTLRLWGGESDSGCCAVSDVDDARRVADALGIEHHVFNLGDDFERDVVAPYVA
                     AHAEGRTPNPCVECNRHLKFNRLRHRASALGFDRIATGHHARIVQRRDGTRRIARAVD
                     SAKDQSYVLHMLDQPQLAGLLLPIGDLSKDEVRRRAAAIGLRTADKPDSQDVCFITRA
                     HGREDFLGRRIPLTPGRVVDGSGAEVGAVNAMELVTIGQRRGMALAGGGAPRYAVAVD
                     LPTATVTVGSAADLLVDETPVESLVWTGDHVDTDGLAAQTSAHGTAEPVTVHASLERS
                     PDRWQLRWVRPHRRVAPGQSVVFYEGDEVVGGATAA"
BASE COUNT          557 a         1181 c         1325 g          596 t
ORIGIN      
        1 atgtggccac accggaccac atcgccaatg tgttggaccg ggcgggtttc gatccgacct
       61 acggcgacgc ggcgaccgac ccctcgtggg acgccgaact gcgggccgag accgccgaag
      121 cggtgggtcg cacgggtgat caggtgggga cgccgatcat caccttcggg cctcccgacg
      181 gtccgtcgat cttcgggccg gtcatctcgt cggtgcctga ctctgacgag gagtgcctgg
      241 cgctgtacga cgccacggtc accctgtgca ggttcgacac gttctccgaa ctcaagcgca
      301 gtgcccggcc acggttggac ctaccggtca tgaccgggcg tcccggttaa ctccgaacct
      361 cttccacttc gaccgggtac cggcttggct actggtgtta cgtggtgtca gctcgacgcc
      421 acgtgctcac gtgttgcgac gagtcgtcgg aaaatggggt gccccgccag tcctcggttc
      481 ggtcgacccg ctccagcccg gcgacgtccg ccatggcgtc gagttggtcc ggggtggcgt
      541 agcgcaacag gtaaggaaag aaccggtttc cggccgccgt catcacgatc cgctgcccgg
      601 tgatggtctg ggcagccctg ttcgtggcca ccacgtccag catcacccgg tcgatggata
      661 cgtcgcggac cgatacgccg tcgtgggtgt cgggggctgg cacgaacgcc tcaagcacga
      721 accggccttc gggggccaac gtctcggcca cgccgtgcat gcacgcctgt tgggtcgcct
      781 cggtggtcag gttgaagaac gtgttgaaac ccacaagtac cacgtcgaat cctgtgccag
      841 cgatggtcgg atcggccatg tcgccggcga ccagagtgag tcggtcagct cccggcttgg
      901 ctcggaggcg gtccagcatc gacggtgagg catccagccc ggtgacggtc aggccccggt
      961 cggccagcgg gagagcgagt cggcccgtgc cgacgcccag ctccagcacg gtgcctgccg
     1021 gcccggcgag ggtgttgacc cgatcggcta cctcgctggg agatccgatc tgggtgatgg
     1081 cgatcccgcc gtcgacgccg taccactcgt cgtagacctc ggcgatggtc tcgccgtagg
     1141 tctcgctgtc gtacccgtcc ataatccaga gtctggagga gggatcggca aactccaata
     1201 gggacccgtg gaccgggtcg gccgtagcct tgacgtcgtg ggagtggagc tgacgaacga
     1261 gattccccag aaacgggtct acctggatca tgcggcaagc acgccggccc ggcccgaggt
     1321 ggtggccgcc atgttgccgt ggctgactga ccaccccggc aacccgtcgg gttcccatgc
     1381 cgcggcccgg gaggcccggc gggcggtcga cgacgctcgc gaccatgtgg ccgtcctagt
     1441 cgggtgccta ccgggtgagg tggtcttcac ctctgggggg accgaggccg acaacctcgc
     1501 tgtggacggc gtggtccggg ccaccggtgg tctgccggtg tgtagcgcgg ccgaacatcc
     1561 ggcggttctg gagccggtac gtgacgccgg cgggctggtg gtgccgaccg acgccggtgg
     1621 ctgtatcgac ctcgaggcgc tgtccgaggt gctggcctcg gtcgacgcct ctccggcggc
     1681 cgatgccccg gagatgggga tcgccctggt gtcggccatg gtggccaaca acgagactgg
     1741 agcggtgacc gacatcgacg cggtggccgc ggtggtggcc gagcatgcgc ccgacaccgt
     1801 tgtgcacacc gacgccgtgc aggccactgc atggctggac ctgcccgcga cggtccatcg
     1861 agccgggttg gtcagcatca ctggccacaa gttcggcggc cccaagggcg ccggcgcact
     1921 ggtggtgcgg gctggggtgc cgttggcgcc cgtcctacgg ggtggtggac aggaacgaga
     1981 acggcgcagc ggaacccaga acgtgccggc catcgtgggc cttggcgaag cagcccgtct
     2041 gatggtcgtc gagcgtgacg ccgtttgcca gcgggtcgga gccctccgga accggctgga
     2101 agacgggctg gtggaggccg tcagcggagc ccgccggacg gtgcccgacg gaacgccccg
     2161 gaccccgggg gtggcccatc tgtgtttcga tggcatcgag agcgaagagt tgttgttcct
     2221 gctggaaagg gacggaatcg cggccagcgc cgcgtcgtcg tgtgccagcg gggctcagga
     2281 accctcaccg gtcctggccg ccatgggcat cgaccgggtg acggcagcgg gatcgctacg
     2341 actgtccttg gggtgggcca gtaccggcgc tgacgtagac catgccctcg ccgtcgtccc
     2401 ggcggccgta gagcgacttc gggcccacac ccgttcgttg cagtccagat gaccgaccag
     2461 agccacgccg tgtctcaccc gttgggaacg caggacggcg gcccgatcgg gccggtgatg
     2521 gtggccatgt ctgggggcgt cgactcgtcg gtggcagcgg ctctacttcg cgacgccggc
     2581 catgaggtgg tgggggtgac ccttcgactg tgggggggcg agtccgactc ggggtgctgc
     2641 gcggtgtccg acgtcgacga tgcccgtcgg gtggcagacg ccctggggat cgaacaccac
     2701 gtgttcaatc tgggcgatga cttcgagcgt gacgtggtgg cgccctacgt ggccgcccac
     2761 gcggagggtc gcactccgaa cccatgcgtg gagtgcaacc gacacctcaa gttcaaccga
     2821 ctccggcacc gggcctccgc tctgggcttc gatcggatag ctaccgggca ccacgcccgg
     2881 atcgtccaac ggcgcgacgg cacccgccgc attgcccggg ccgtcgactc ggccaaggac
     2941 cagtcctacg tgctgcacat gctcgaccag ccacagttgg ccggactgct gctgcccata
     3001 ggcgacctga gtaaggacga ggtccggcgt cgtgcggcgg ccataggact ccggacggcc
     3061 gacaagcccg acagtcagga cgtgtgcttc atcacgcggg cccacggtcg ggaggacttc
     3121 ttgggccgac gtatcccgct gacgcccggc cgggtggtgg acggatccgg cgccgaggtc
     3181 ggtgcggtta acgcgatgga gttggtgacc attggccaac gtcgggggat ggctctggct
     3241 ggtggtggtg caccccgtta cgcggtggcc gtggaccttc cgacagccac cgtgaccgtg
     3301 gggtcagccg ccgatctact ggtcgacgag accccggttg agagtctggt ctggaccggc
     3361 gatcacgtgg atacggacgg actggcagca cagacgagtg cccacgggac ggccgaaccg
     3421 gtgacggtgc acgccagtct ggagaggtct ccggaccgat ggcaactgcg atgggtccga
     3481 cctcaccgtc gggtggcgcc aggccagagc gtggtgttct acgagggcga cgaggtggtc
     3541 ggcggagcga cggccgcctg acctgtttca ggccactgac aggtggcctg tttcagccca
     3601 ctggcaggcg acgtcgggcc gcttcggcaa ggaccacgtc gggacggacc ggggaacac
//
LOCUS       DASCMR010000324         1859 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001573512, whole genome shotgun sequence.
ACCESSION   DASCMR010000324 DASCMR010000000
VERSION     DASCMR010000324.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1859)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1859)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1859
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001573512"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..577)
                     /gene="pdxH"
                     /locus_tag="QGG16_07725"
     CDS             complement(<1..577)
                     /gene="pdxH"
                     /locus_tag="QGG16_07725"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HJP25199.1"
                     /translation="MDLSGVREAYESAGFDLADLAGDPFIQFQRWFGEVEAAGYWEPN
                     AMVLSTVTADGWPSARNVLLKRIDAEGFVLFTNYTSDKAAEMDRSGRAALTFSWTELR
                     RQVRVMGTAERLNDEESDGYWISRPRGSQLGAWASDQSVVVPDRATLERAFVEAEQRW
                     ADQPVERPDHWGGYRVRPHSIEFWQGRPDRLH"
     gene            652..1074
                     /locus_tag="QGG16_07730"
     CDS             652..1074
                     /locus_tag="QGG16_07730"
                     /inference="COORDINATES: protein motif:HMM:NF014584.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CrcB family protein"
                     /protein_id="HJP25200.1"
                     /translation="MSSPSYPAVGPSVRELALVAVGGVTGAATRWGLLEATVGADGGP
                     AGPVLLANLVGCGLLGLLLGRGVTSSTRLLAGVGFCGGLTTFSTFAVEVAEALRASDA
                     SGAFGYAVLSVGGGLATFLLGRMTGRAILRGRPTESSC"
     gene            1068..1409
                     /locus_tag="QGG16_07735"
     CDS             1068..1409
                     /locus_tag="QGG16_07735"
                     /inference="COORDINATES: protein motif:HMM:NF014584.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CrcB family protein"
                     /protein_id="HJP25201.1"
                     /translation="MLIGLGFVAAAAVGGGLRLIATRRWPGGHLGTMAVNVSGAFALG
                     LLAGADAGTLTVVGTGGLGAFTTFSTFAADVVALGETRIGTRRGRSVGHILNTLVLGV
                     GAAALGLMISV"
     gene            complement(1420..>1859)
                     /locus_tag="QGG16_07740"
     CDS             complement(1420..>1859)
                     /locus_tag="QGG16_07740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HJP25202.1"
                     /translation="EFDKVELLSYATRDQAPEVHADILARAEAAITDLGLSYRVLDLC
                     AGDLGGSSARTFDLEVYAPGADQWLEVSSVSWFSDYQARRANVRYRPTDEKGTRIVDT
                     LNGSGLAVPRVWAGVVETHRQPDGTIAIPEVLQPYMRGATTIG"
BASE COUNT          257 a          634 c          644 g          324 t
ORIGIN      
        1 catggagccg gtctggtcgg ccctgccaga actcgataga gtggggcctg actcggtagc
       61 caccccagtg gtcgggccgt tcgacgggct ggtcggccca gcgctgctcg gcctcgacga
      121 aggcgcgttc gagtgtggct cggtcgggca ccacgacgct ctggtccgac gcccacgccc
      181 cgagctgact ccctcgtggt cgggagatcc agtagccgtc ggactcctcg tcgttgaggc
      241 gctcggcggt gcccattacc cggacctgac ggcgcaactc agtccaactg aaggtgaggg
      301 cggcccgacc tgacctgtcc atctcggcgg ccttgtcgct ggtgtaattg gtgaacaata
      361 cgaagccctc agcgtcgatt cgcttgagga gcacgttgcg ggccgatggc cacccatcgg
      421 cggtcaccgt ggagagcacc atggcgttgg gctcccagta gccggctgcc tcgacttcgc
      481 cgaaccatcg ttggaactgg atgaaaggat cgcctgccag gtcggccagg tcgaagcccg
      541 ccgactcgta ggcctcccgt accccactca agtccatccc gccagtcaac cagccgacgc
      601 ctcgtaccgg cacacccgct gcaccccgaa ctgcctccta gtgtcagcct gatgtccagc
      661 ccctcctacc ccgccgtcgg gccgtccgtg cgggaactcg ccctggtggc tgtcggtgga
      721 gtgaccgggg cggcaacccg gtgggggctg ctggaggcaa ctgtcggtgc ggacggcggc
      781 ccggccggac cggtgctgct ggccaacctg gtggggtgcg gcctgctggg ccttctcctg
      841 ggacgcggtg tcacttcctc gactcgcctg ctggccggcg tcggattctg tgggggcctg
      901 accaccttct cgacctttgc cgtcgaagtg gccgaggccc ttcgggccag cgacgcgtcg
      961 ggagcgttcg gctacgcggt gctctcggtt ggcggcgggc tggccacctt cctgctgggt
     1021 cggatgaccg gccgagccat ccttcgaggt cgacccacgg agtcgtcgtg ctgatcgggc
     1081 tgggattcgt ggccgccgcc gcagttggag ggggacttcg actgatagcg acccgacgtt
     1141 ggccgggcgg tcacctgggc acgatggccg tgaacgtgtc cggtgcgttc gccctcggac
     1201 tcctggccgg cgccgatgcc ggcacgctga cggtcgtcgg cacgggtggc ctgggagcgt
     1261 tcaccacgtt ctcaaccttc gccgccgacg tcgtggcgct cggtgagacc cggatcggca
     1321 cccgtcgggg tcgctcggtg ggccacattc tcaacaccct cgtgttggga gtcggggccg
     1381 cagcactcgg cctgatgatc agcgtctgac ggctggcagt cagccgatgg tggtggcgcc
     1441 cctcatgtag ggctgaagca cctccgggat ggcgatcgtg ccgtcgggct ggcgatgcgt
     1501 ctcgaccacg ccggcccaga cacgcggtac ggcaaggccg gacccgttca gggtgtcgac
     1561 gatccgtgtg cccttctcgt cggtcggccg gtaccggacg ttggcccggc gggcctggta
     1621 gtcgctgaac cacgacactg acgagacctc caaccactgg tcggcccccg gcgcgtacac
     1681 ctcgaggtcg aaggtgcggg ccgacgagcc acctagatca ccagcgcaca gatccagcac
     1741 ccggtaggac aacccgaggt cggtgatggc cgcctcggcc ctggccagga tgtcggcgtg
     1801 cacctcgggg gcctggtcgc gtgtggcgta cgagagcagc tccaccttgt cgaactcat
//
LOCUS       DASCMR010000325         2183 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001574313, whole genome shotgun sequence.
ACCESSION   DASCMR010000325 DASCMR010000000
VERSION     DASCMR010000325.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2183)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2183)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001574313"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..890
                     /locus_tag="QGG16_07745"
     CDS             <1..890
                     /locus_tag="QGG16_07745"
                     /inference="COORDINATES: protein motif:HMM:NF036799.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25203.1"
                     /translation="IRDAMVGLGLDEVMPVPFLAPGDLERAGLPADGITVTNPLVAEE
                     SVMRASLRPGILKTLAYNASHRLHGLGLFEIGHVYRTPAPVGGEVSRLPDEREHLAVA
                     LGGRDAGEAVAVWSALADALDARHYQLVADGPAGLHPTRTARIEVDDPSSGTVVVGHV
                     GEVDPGALAAYDIADRVGWLEVDLETLLDLPHGQRPYRRVSRYPSSDIDLAFEVDEGT
                     PASAVGSCLTAAAGDLLADLSLFDVFRGAPVADGRRSLAFTLRFQADDRTLTDAEVAA
                     VRTACIDAVQSNLSATLRG"
     gene            925..1902
                     /locus_tag="QGG16_07750"
     CDS             925..1902
                     /locus_tag="QGG16_07750"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024989.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003960 - NADPH:quinone reductase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0070402 - NADPH binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone oxidoreductase family protein"
                     /protein_id="HJP25204.1"
                     /translation="MRAWQVHELGDPIDRMVLDEVDLPVPGPGRLVVNTEAVGLAFPD
                     VLQVRGEYQVKPPLPFVPGSETAGTVASVGEGVSSDLIGRRVVALGGGLAEQIELPAS
                     QSFEVPEGLSSAKAAAIPMNYCTTWFALHDRAHLAAGETLLVTGASGGVGSAAIQLGL
                     AAGARVIAVAGGPDKVAACESLGADAVIDHREVDDLVERVRELTDGKGVDVAYDPVGG
                     ETFQQVRRCMAWNGRLLVVGFVAGIPKLATNHVLLKNYSVVGVHWGASLARDPESLPS
                     QVASVMALVDEGAVDPLLHPPYAFEDAARALQDIYDRQVVGKVVADLTA"
BASE COUNT          311 a          657 c          795 g          420 t
ORIGIN      
        1 ggatccgtga cgccatggtg ggcctggggc ttgacgaggt catgccggtg cccttcctgg
       61 cccccggcga cctggagcgg gccggcctgc ccgctgacgg gatcacggtg accaacccgc
      121 tggtggctga ggaatcggtc atgcgggcct cgttgcggcc cggcatcctc aagacgttgg
      181 cctacaacgc ctcccatcgc ctgcacggac tgggtctgtt cgagatcggc cacgtgtaca
      241 ggacgccggc accggtgggt ggcgaggtgt cacgcctgcc tgacgaacgg gaacacctgg
      301 ccgtggcctt gggtgggcgc gacgccggtg aggcagtggc tgtctggtcg gccttggccg
      361 acgcccttga cgcccgtcac taccagctgg tggctgacgg tccggctggc ctgcacccga
      421 cccgtacggc ccgcatcgag gtggacgacc cgtcgtcggg aaccgtggtg gtcggccatg
      481 tgggtgaggt tgaccccggg gcgctggctg cgtacgacat tgccgaccgg gtgggctggt
      541 tggaagtcga tctcgagacc cttctggatc tgccccacgg gcagaggccg tatcgccggg
      601 tgagtcgcta tccgtcgtcg gacatcgacc tggcgttcga ggtagacgag ggcacgccgg
      661 cgtcagccgt gggctcgtgc ctgaccgcgg cggccggtga tctgctggca gatctgtcgc
      721 tgttcgacgt gttccgcgga gcaccggtgg ccgacggccg gcgaagtctg gctttcacgc
      781 tgcgttttca ggccgacgac cggacgctca ccgatgccga ggtggctgcg gtgcgtacgg
      841 cgtgcatcga tgctgtccag tcgaacctgt cggccaccct gcgcggctag gagcaaatcc
      901 cgccccggcg gtacggtcgc tgccatgcgc gcatggcagg tacacgaact gggtgatccg
      961 atcgaccgca tggtcctgga cgaggtcgac cttcctgttc cggggcccgg tcgactggtg
     1021 gtgaacaccg aggcggtggg gttggccttc cctgacgtcc tgcaggtgag gggtgaatac
     1081 caggtgaaac cacctcttcc gttcgtgcca ggcagcgaga cggcgggcac ggtggcttca
     1141 gtgggtgagg gggtgtccag cgacctgatc ggccgccggg tggtggccct gggtggtgga
     1201 ttggccgagc agatcgagct tccggcttcg cagtccttcg aggtgcccga ggggctttcg
     1261 tcggccaagg cggcggctat tccgatgaac tactgcacta cgtggttcgc cctgcacgat
     1321 cgggctcacc tggcggccgg tgagacgctg ctagtcacgg gggcgtcggg tggtgtgggg
     1381 tcggcggcaa tccaactggg gctggctgct ggtgcccgag tgatcgcggt ggccggcgga
     1441 cccgacaagg tggcggcatg tgagtccctc ggagccgacg cggtcatcga ccaccgcgag
     1501 gtcgacgacc tggtggagcg tgtacgtgag ctcaccgacg ggaagggcgt ggacgtggcc
     1561 tacgacccgg tgggcggcga aacgttccag caggtccggc ggtgcatggc ctggaatggt
     1621 cgcctcctgg tggtcggctt tgtggctggc atcccgaagc tggccaccaa ccacgtgttg
     1681 ctcaagaact actcggtggt cggcgtccac tggggcgcgt cgttggctcg tgatcccgag
     1741 tcgctgccca gccaggtcgc atcggtgatg gctttggtcg acgagggcgc cgtggatccg
     1801 ctactccacc cgccctatgc cttcgaggat gccgctcggg ccctccagga catctacgac
     1861 cggcaggtgg tgggcaaggt agtggcagac ctgacggcct gaattgccgg ttcgggctgt
     1921 tcgccgactc cggtcgttgg acagaagttg tccggatttt tggacagggg ttgctctgcg
     1981 ttcttgaatt agttagatca ggccccagaa ctcgcccaca gagcccccag aaccccttga
     2041 ttacaacggt ttttgggctt cagaggttgt tcacggcggg ggatagaggt gcgttgtgtg
     2101 gcttagtccg tctaaaaatg ccggttcttt cgttgccagg ggtgccaaaa gagcctctct
     2161 aaccctctgg gtcggccgac tgg
//
LOCUS       DASCMR010000326         1502 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001582163, whole genome shotgun sequence.
ACCESSION   DASCMR010000326 DASCMR010000000
VERSION     DASCMR010000326.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1502)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1502)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1502
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001582163"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..823
                     /locus_tag="QGG16_07755"
     CDS             <1..823
                     /locus_tag="QGG16_07755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25205.1"
                     /translation="LALVGVLGLVLTDEVAIYGLAVGGAPFLGVAAALAGRRSDGASR
                     PDPATEAGPVPVADGTVDRRGGLAALAPAMGALLVASVSTAVVLNVSPLAVELLAGPS
                     EGHEAGRFLNALLVARVPLFFFQAVQASLLPRLSALAADRRFDEFRHVLGRLLALVGF
                     LGLAAVVACGLVGHRVVELAFGAEFAVDRRDMVLLASSSAVLMVVLCLAQALIALRWQ
                     GRMALAWLAGLLAFPMVLAVGSDLFLRVEVALLATVSTSMVAMSVLLGRRFRLLQ"
     gene            885..>1502
                     /locus_tag="QGG16_07760"
     CDS             885..>1502
                     /locus_tag="QGG16_07760"
                     /inference="COORDINATES: protein motif:HMM:NF013630.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HJP25206.1"
                     /translation="MDPQPTDQQPPARRPVFFWAASFRSIVVVSALVGTLLATASPAP
                     ADVVVTVEAGDSLSEIAAEHGTTVSALMSANGIVDADRLFMGQRLVIPGPGATPTTLP
                     TMVVVVQRGDSLSGIAAEYGVTLSALIQANNIVDPDTVHVGQELLVPGATRPVTPTGP
                     VVVTVQPGDSLSAIASVHGVSVSALMNANDLTDPDRLSVGQQLTIP"
BASE COUNT          173 a          525 c          520 g          284 t
ORIGIN      
        1 cctggccctg gtgggcgtgc tcggtctggt gctgaccgac gaggtggcga tctacggcct
       61 ggctgtcggc ggtgcgccgt tcctgggggt ggccgccgcg ttggcaggtc gacggtcgga
      121 cggcgcttcg cgcccggacc cggctaccga ggccgggccg gtcccggtag ccgacgggac
      181 cgtcgaccgt cggggtggcc tggcggccct ggcccccgcc atgggtgcct tgctggtggc
      241 ctccgtgtcc acggccgtcg tgctcaacgt cagccccctg gccgtcgaat tgctggccgg
      301 accgtccgaa ggccacgagg caggtcggtt cctcaacgcc cttctggtgg cccgggtgcc
      361 tctgttcttc ttccaggctg tgcaggcttc cctactgccc aggctctcgg cgttggccgc
      421 cgatcggagg ttcgacgagt tccgccacgt gctgggtcga cttctggctc tcgtcggatt
      481 cctcggtctg gccgccgtgg tggcctgtgg cctggtcggc caccgggtcg tagagctggc
      541 tttcggagcc gagttcgccg tcgaccgtcg ggacatggtc ctgctggcca gttccagcgc
      601 cgtgctgatg gtggtgctgt gcctggccca ggcactgatc gccctccgtt ggcagggccg
      661 gatggccctg gcctggttgg ccggcctgct ggcctttccg atggtgctgg ctgtcgggag
      721 cgacctgttc ctccgggtgg aggtggcatt gcttgccacc gtgtccacct cgatggtcgc
      781 catgtcggtg ctcctcggac gacggttccg actcctacaa tgaccgcctg accgggcgga
      841 acggggcgtt cccacacgtc caacgacccg tgtacggaag caacgtggat cctcagccga
      901 ccgaccagca gcctccagcc cgccgacctg tgttcttctg ggcggcgagc ttccggtcga
      961 tcgtcgtggt ctcggcgttg gtggggaccc tgctggccac agcgtcgccc gcacctgctg
     1021 acgtggtggt caccgtggag gccggtgaca gcctctcgga gatcgccgcc gagcacggca
     1081 ccaccgtgtc ggcgctcatg tcggccaacg gcattgttga cgccgaccgg ctcttcatgg
     1141 gccaacgact ggtcatcccc ggcccgggcg ccaccccgac gaccctcccc accatggtgg
     1201 tggtggtgca gcgcggcgac agtctgtcgg gcatcgctgc ggagtacggc gtgaccctct
     1261 cggcgttgat ccaggccaac aacatcgtcg atcccgacac ggtgcacgtc ggccaggagc
     1321 tactggtgcc aggtgccacc cggccggtga cccccaccgg gccggtcgtg gtgaccgtcc
     1381 aacccgggga cagcctgtcg gccattgcct cggtgcacgg ggtttcggtc tcggccctca
     1441 tgaacgccaa cgacctgacc gacccggatc ggctttcggt gggccagcaa ctgaccatcc
     1501 cg
//
LOCUS       DASCMR010000327         1591 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001590658, whole genome shotgun sequence.
ACCESSION   DASCMR010000327 DASCMR010000000
VERSION     DASCMR010000327.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1591)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1591)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1591
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001590658"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..793
                     /gene="hisF"
                     /locus_tag="QGG16_07765"
     CDS             <1..793
                     /gene="hisF"
                     /locus_tag="QGG16_07765"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: protein motif:HMM:TIGR00735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HJP25207.1"
                     /translation="LIVETVRIVPCLDVDNGRVVKGVNFVGLRDAGDPVELAARYDSE
                     GADELVFLDITASSDAREITLDMVRHVAEEVFIPFTVGGGIRTVEDARGILRAGADKV
                     SVNTAAVDRPELIGELAAEFGSQCVVVAVDARRSEADVGPPSSGFEVFTHGGRMPTGR
                     DLVAWIDEVVERGAGEILLTSMDRDGTRDGFDVEMLRTVGDVASVPLIASGGVGNLDH
                     LVAGAVDGGADAVLAASIFHFGEYTVAEAKAHLAAAGVTVRPVTR"
     gene            816..1217
                     /locus_tag="QGG16_07770"
     CDS             816..1217
                     /locus_tag="QGG16_07770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HJP25208.1"
                     /translation="MNTQKSSSGQSLESGSLDGNGVMPGPSDHEGLPIKMLNDRILVR
                     TDSEEGERRSTGGILIPATAQVGKRLAWAQVVAAGPNVRAMEVGDQVLFNPEDRYEVE
                     VRGHDYIILRERDVHAVAAQRLEEGSTGLYL"
     gene            1309..>1591
                     /locus_tag="QGG16_07775"
     CDS             1309..>1591
                     /locus_tag="QGG16_07775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HJP25209.1"
                     /translation="MSPAPSTIESTPIAATAEQLEGVTFNEDGLVPAIIQEEHTGRIL
                     MMAWMNADSLRETMATGRTWFWSRSRREYWCKGETSGDRQYVREAYYDCD"
BASE COUNT          276 a          483 c          555 g          277 t
ORIGIN      
        1 cctaatcgtg gagaccgtgc ggatcgtccc ctgtctggac gtcgacaacg gccgggtggt
       61 caagggcgtg aacttcgtgg gtctccgcga tgccggcgac ccagtagagc tggctgcccg
      121 ctacgacagc gaaggtgccg acgaactcgt gttcctagac atcacagcgt cgtccgatgc
      181 ccgggagatc accttggaca tggttcgcca cgtggccgag gaggtgttta tcccgttcac
      241 cgtcggtggg ggtatccgga cggtcgagga cgcccggggg atcctgcggg ccggcgctga
      301 caaggtctcg gtcaacacgg ctgctgtgga ccgccctgag ctcatcggcg agttggccgc
      361 ggagttcgga agccagtgcg tggtggtggc ggtggatgcc cgacgctccg aagcggacgt
      421 tggacctccg tccagcggct tcgaggtctt tacccatggc ggtcggatgc cgaccggacg
      481 ggacctcgtg gcctggattg acgaggtcgt cgagcgggga gccggcgaga tcctgctgac
      541 gtccatggac cgtgacggca cccgtgacgg cttcgatgtc gaaatgctcc gaaccgtggg
      601 cgacgtggcc agcgtgccac tgatcgctag cggtggcgtc ggaaacctcg atcatctggt
      661 ggccggagcg gtggacggtg gcgccgatgc tgtgctggcc gcctcgatct tccacttcgg
      721 ggaatacacg gtggccgagg caaaggccca cctggcagcg gccggtgtga ccgttcggcc
      781 cgtgacccgc tgaccgcgcc gttaccgtgc accttgtgaa cacgcagaag agctcgtcag
      841 gccagtctct ggagagcggc tccttagacg gcaacggtgt aatgcccggc ccatcggatc
      901 acgagggcct tcctatcaag atgctcaacg accggatcct cgtgcgaacc gactctgagg
      961 aaggtgagcg tcgctccacc ggcggcatcc tcatcccggc cactgcccag gtgggaaagc
     1021 gtttagcctg ggcccaggtg gtggccgccg gtcccaacgt gcgcgcgatg gaagtcggcg
     1081 accaggtgct gtttaacccg gaagaccgtt acgaagttga ggtccgggga cacgactaca
     1141 tcattctccg ggagcgcgat gtccacgcgg tggcagccca gcgcctcgaa gagggaagca
     1201 cgggtctgta tctgtagtgg ggatgggcaa ccgggtccgg cggttggccc cggctgcgaa
     1261 tcgaaacact gaccgtcagc gcaagggggt gaccgtaggc tgacctccat gtctcccgcc
     1321 ccctccacca tcgagtccac ccccatcgcc gcgacggctg agcagttgga aggcgtgacc
     1381 ttcaacgagg acggcctggt gccggccatt attcaggagg agcacactgg gcggatcctg
     1441 atgatggcgt ggatgaacgc cgactcccta cgcgagacca tggctactgg gaggacctgg
     1501 ttctggagcc gtagccgccg ggaatactgg tgcaagggcg agacctcagg cgatcgccag
     1561 tacgtgcgtg aggcgtatta cgactgcgat g
//
LOCUS       DASCMR010000328         6595 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001591474, whole genome shotgun sequence.
ACCESSION   DASCMR010000328 DASCMR010000000
VERSION     DASCMR010000328.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 6595)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6595)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6595
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001591474"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..305
                     /locus_tag="QGG16_07780"
     CDS             <1..305
                     /locus_tag="QGG16_07780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="steroid 3-ketoacyl-CoA thiolase"
                     /protein_id="HJP25210.1"
                     /translation="IAATTHALEKTGMSIDDFDLFECNEAFAPVPLAWMLEHSVPHEK
                     VNVNGGAIALGHPLGCSGAKLMTTLLYELERTGGRYGFQTMCEGGGQANVTILERL"
     gene            complement(337..1323)
                     /locus_tag="QGG16_07785"
     CDS             complement(337..1323)
                     /locus_tag="QGG16_07785"
                     /inference="COORDINATES: protein motif:HMM:NF012596.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HJP25211.1"
                     /translation="MTGSGSVRVWSAAEATDLLSAPTVDLDLGALRDAPVLVIDDADR
                     LTAGTTAVLDGLPLVSVGIAPVGTAPALDVLVADPDAAAAVVDGVMANPMAAVTCCQV
                     LRHGGGMSTDGGLLLESTAFGTLQGGPEFARWLDGRGRRARPGESDPPVLVDASGDVV
                     RLTLNRPRLRNAWSAAMRDALVEALRPLAVSGDDRPVHLTGAGSAFCCGGDPAEFGTV
                     DNSATAHLIRSSGNAASWLDRLAPRLTVTVQGPAVGSGVELAAFADRIEATAAATFRL
                     PEVSMGLIPGAGGTVSVPRRIGRQRTAWLCLTGTTIDVATALDWGLVDTFLD"
     gene            complement(1334..2863)
                     /locus_tag="QGG16_07790"
     CDS             complement(1334..2863)
                     /locus_tag="QGG16_07790"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HJP25212.1"
                     /translation="MMLLEMAAAGFGDRIAVGSLDGGLTFQQLFDRAGVAADRFRAAG
                     VDAVAMADVSSAALPISLFGAAWADLPFVPLNYRLTDDELATLAGRIAPAIAVVGPEA
                     TGRLSGVDGVSVVDRDALLADLVDALAPSPEWDMEGEGTAILLFTSGTTGDPKAAVLR
                     HRHLVSYVLGSVEFMGAGEEEAALVSVPPYHVAGMAAILSNVYAGRRIVQLPAFDAAA
                     WVDLVRTEGVTSAMVVPTMLTRIVEYLDAEVADDATPDGACLPSLRSLSYGGGKMPRP
                     TIERALQLLPDTAFVNAYGLTETSSTVALLGPQEHREALASDDESIRARLGSAGRPLP
                     SIEVSIRDEDGTEVATGEPGEIWVRGEQVSGEYRGLAPRLTSEGWFPTHDGGWMGDDG
                     FLHVSGRIDDVIVKGGQNISPSEIEAVLVDHPGVSDAAAIGLPDAQWGERIVAAVVRS
                     TGSTVGADELQEAVRAELRSNRTPDHVAFVDALPYNDTGKLLRRVLRADLADLGDGST
                     Q"
     gene            complement(2921..3226)
                     /locus_tag="QGG16_07795"
     CDS             complement(2921..3226)
                     /locus_tag="QGG16_07795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25213.1"
                     /translation="MPNLKPGSRFTSDVCTTEVIVVKGAGEADLRCGGVPMASAGSAS
                     GTGTPVSGADGGTLMGKRYVDAEETVEVLCTKPGDGSLGLGDTLLDLKEAKPLPASD"
     gene            3337..4482
                     /locus_tag="QGG16_07800"
     CDS             3337..4482
                     /locus_tag="QGG16_07800"
                     /inference="COORDINATES: protein motif:HMM:NF014564.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HJP25214.1"
                     /translation="MSRSDSTPMLDEVFRRTGEPPRVDDSGSATRRWEASRAAVLSGP
                     ANGPPRRVPNGVANGLAVLTSMLEALSGLVVEGPVLVAERAVAAGLGRRGATSVGGEA
                     HLVEAADGLVCLNLARPDDVASIPALLGSTMDPADWPAVRRAVSLLAGAELAKRADLL
                     GMPLGVPGTAPDRPLVVTIGADRAEVKRQPLVVEFGSLWAAPLCGALLARAGCRVVKV
                     ESVQRPDGARRGPATFFESLNGTKEEISVDPSTADGLELVHMLVDAADVVLEASRPRA
                     LAHWGISAAEEVQRGTVWASITGYGRTGPRSGGVAFGDDAAVSGGLMLHDPPGFVADA
                     VPDPVTGLLAAVAVQAALADGVGALLDLSLAGVACWLADPQVDQSAD"
     gene            4556..5224
                     /locus_tag="QGG16_07805"
     CDS             4556..5224
                     /locus_tag="QGG16_07805"
                     /inference="COORDINATES: protein motif:HMM:NF039921.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HJP25215.1"
                     /translation="MSEQMTDDDDAQDLDDDAQNLRASDGRVPGRRGLATRQKMLDAT
                     GVLLDTVAYRDLKVVDIAREAGTSPATFYQYFPDVEAAVLAMASDLGDAWHEDLSKLV
                     TNRDWEGDPDGSAHRVADGMLEFWTLHKPVLRVLDMASMEGDLRFREIRANLLAGATE
                     ALMDLAAERHIPGDPMASAGVVVGMLAHVANHQHGLERWGVSHDVLVDTVAGIIRRTI
                     LGVV"
     gene            5278..>6595
                     /locus_tag="QGG16_07810"
     CDS             5278..>6595
                     /locus_tag="QGG16_07810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase family protein"
                     /protein_id="HJP25216.1"
                     /translation="MTPRVRFAPSPTGYLHVGSARTALFNWLHARSTGGTFVLRIEDT
                     DAERNRTDLTDSLLAELEWLGLDWDEGPYFQSERCDRHREVVEDLLGRGLAYLCDADN
                     QEVAGSTLVEGLAVRFRMPVGATMAFADVVRGEVSFATDDLEDFVIWRSNGSPMFLLA
                     NAVDDADMGITHAIRGEDLLSGVPKVLLLLDAIGVSRPTYAHLPLLVNEQRKKLSKRR
                     DDVSIGDYRSRGYLPEAMVNYLALLGWGPPDDVEVRPLSEIVELFRIQDVNKAAAFFD
                     LKKLEHVNASHLRGLSKPDFMERVAPWVGTDAPWPADRFDTGQFSTMVDLVQEKLRTL
                     SDMPRFVDFLFLEDPVDDPDSWEKVMVKGPSAAAMLDGAAVALSDCAWDTDSVLAAVA
                     AVGESLDLRLGKAQAPVRVAVTGRTVGPPLFETMAVCMERDEVLRRI"
BASE COUNT         1086 a         2157 c         2265 g         1087 t
ORIGIN      
        1 cgattgcagc gaccacccac gcgctagaga agacgggcat gtcgatcgac gacttcgacc
       61 tcttcgagtg caacgaggcg ttcgccccgg tgccgctggc gtggatgctc gaacacagcg
      121 tgccgcacga gaaggtcaac gtgaacggtg gagcgatcgc gctggggcat ccgctgggat
      181 gcagcggcgc aaagctcatg acgacgctcc tgtacgagtt ggagcgcacc ggtggccgct
      241 atggcttcca gaccatgtgt gagggcggcg gccaggccaa cgtaaccatc ctcgagcggc
      301 tctgatctgg tggtccgcac ggcctgcccc aggagttcag tcaagaaacg tatcgaccag
      361 gccccagtcg agtgccgtgg cgacgtcgat ggtggtgccg gtcaggcaca accacgcggt
      421 gcgttggcga ccaatccgcc ggggcacgct gaccgtcccg ccagcacccg ggatcagtcc
      481 catggagacc tctggcagcc ggaacgtcgc tgcagcagtg gcctcgatcc gatcggcaaa
      541 agcggccaac tccacgcccg acccgaccgc cggtccctgg acggtcaccg tcaggcgtgg
      601 ggccagccga tccagccacg aagcggcgtt gcccgacgac cggatcaggt gggccgtcgc
      661 cgagttgtcg actgttccga actcggccgg gtctccgccg cagcagaagg ctgacccggc
      721 gccggtcagg tgaacgggcc gatcatcgcc cgagacagcg agcgggcgaa gtgcttcgac
      781 gagggcgtca cgcatggccg ccgaccaggc gttgcggagc cggggtcgat tcagcgtcag
      841 ccggacgaca tcgccggagg catccaccaa gaccggcggg tcggattccc cggggcgggc
      901 ccgacgtcca cggccgtcca accagcgggc gaactccggt ccgccctgca aggtgccaaa
      961 ggccgtgctc tcgaggagca gcccaccatc ggttgacatg ccaccaccgt gacggagcac
     1021 ctggcagcag gtcacggcgg ccatcgggtt ggccatcacc ccgtcgacca ccgcggccgc
     1081 cgcatcggga tcggcgacca ggacgtccag ggcaggtgcc gtgcccacag gagcgatgcc
     1141 taccgagacg agtggaagcc catccagcac ggctgtggtc cccgcagtca gacggtcggc
     1201 gtcgtcgatc accagcaccg gtgcatccct tagggcgcca aggtccaggt cgacggtcgg
     1261 tgcgctcagc agatcggtgg cctcagcagc ggaccagacc cggacggagc ccgaaccagt
     1321 cacgaggttg gtttcattgg gtcgaaccgt cgccgaggtc ggccaggtcg gcccgcagga
     1381 cccgccggag gagtttcccg gtgtcgttgt aggggagggc gtccacgaac gccacgtggt
     1441 ccggcgtgcg gttggaacgc agctcggccc gtacggcttc ctgcaactcg tcggcaccca
     1501 ccgtcgagcc ggtggagcgg accacggcgg ccacgatccg ttcgccccac tgcgcatcag
     1561 gcaggccaat ggctgccgca tcggacaccc cggggtggtc gacgagcacg gcctcaattt
     1621 cgctggggga gatgttctgg ccgcccttga cgatgacgtc gtcgatccgg cccgacacgt
     1681 ggaggaagcc gtcgtctccc atccagccgc cgtcgtgggt ggggaaccag ccctcagagg
     1741 tcaggcgggg cgccaggccc cggtactcgc cggacacctg ttcgccccgc acccagatct
     1801 cccccggctc gccggtggcc acttcggttc cgtcctcgtc gcggatcgac acctcgatgc
     1861 tgggcagcgg acgccctgcc gaaccgaggc gggcccggat ggattcgtcg tcgctggcca
     1921 gggcctcgcg gtgctcctgt ggacccaaaa gggccaccgt ggagctcgtc tcggtcaacc
     1981 cgtaggcgtt gacgaaggcc gtgtcgggaa gaagttggag ggcccgttcg atggttgggc
     2041 ggggcatctt ccccccgccg taggacagcg acctgaggct gggcaggcaa gccccgtctg
     2101 gagtcgcatc gtccgcgacc tccgcgtcga ggtattcgac gatccgggtc agcatggtgg
     2161 gtaccaccat ggcgctggtg acgccttcag tgcgcaccag atcgacccag gcggcagcgt
     2221 cgaaggcggg taactgcacg atgcgccgac cggcatagac gttagacagg atggctgcca
     2281 tgcccgccac gtggtaaggc ggcacgctga ccagagccgc ctcctcctcg cctgccccca
     2341 tgaactcgac tgagccgagc acgtaggaca cgagatgccg gtggcgaagt acggcggcct
     2401 tgggatcgcc ggtcgtgcca ctggtgaaca agaggatggc cgttccctca ccctccatgt
     2461 cccattcggg agaaggcgcc aaggcgtcga caaggtcggc cagcagggcg tccctgtcca
     2521 cgactgacac gccgtccacc ccggagaggc gaccggtggc ctcaggaccc accacggcga
     2581 tcgccggggc gatccgtccg gcgagcgtgg ccagctcatc gtcggtgagg cggtagttca
     2641 gtggcacgaa cggaaggtcg gcccacgccg cgccgaacag ggagatgggc agggcggccg
     2701 acgacacatc ggccatagcc accgcgtcga ccccggcggc ccgaaaacga tcagctgcca
     2761 ctccggcccg gtcgaacaac tgctggaagg tcaggccgcc atcgagggac ccgacggcga
     2821 ttcggtcgcc gaatccggca gccgccatct ccagcagcat catcaggttc acggttgggt
     2881 cggcttcctg gtcggctatc tggcggacgt ctggttcgcc tcagtctgag gcggggaggg
     2941 gcttagcctc cttgaggtcc agcaatgtgt cgcccagacc gagcgagccg tcaccaggct
     3001 tggtgcagag cacctcgacg gtctcctcgg catcgacgta ccgcttgccc atcagggttc
     3061 cgccgtcggc gcccgaaacg ggggtgccgg taccagaggc ggaaccggcg gacgccatgg
     3121 gtactccgcc acaacgcagg tcggcctcac cggcgccctt cacgacgatc acctcggtgg
     3181 tgcagacgtc gctggtgaac cggcttccgg gcttgaggtt gggcatgggg actccagggc
     3241 atgagtggtg gtcggaggcc aagagcatcg cctattgacg gccgtcgggc cactccggcc
     3301 cggagccgat ccacagcaat gagtagcgtc gattcgatgt cccggtccga cagcacgccg
     3361 atgctcgacg aggtgtttcg ccggaccggc gagcctcctc gtgtagacga ttcagggtcg
     3421 gcaacccgga gatgggaggc gtcacgggcc gcagtgctga gtggcccggc caatggtccg
     3481 ccccgaaggg tgcccaacgg ggtggccaac ggactcgccg tattgacatc gatgctcgag
     3541 gcgctaagcg gcctggtcgt ggaggggccg gtgctggttg ccgaacgggc ggtggcggcc
     3601 ggtctcggcc gtcgaggggc gacgtcggtt gggggtgagg cccacctcgt cgaggccgcc
     3661 gacgggctcg tctgtctgaa tctggcccgg cccgacgacg tggcttccat tccggctctc
     3721 ctgggatcca ccatggatcc ggctgactgg ccggcagtgc gtcgggctgt ctcccttctt
     3781 gcaggtgcag aactggccaa gagggccgac ctgctcggca tgcccctcgg cgtaccgggt
     3841 actgcaccgg atcgaccgct agtggtgacc atcggtgctg accgggccga ggtgaagagg
     3901 cagccgctgg tcgtcgaatt cggttcgctc tgggcggccc cgctctgcgg cgcgcttctg
     3961 gcccgggccg gatgccgggt cgtgaaggtg gagagcgtgc aacgaccgga cggtgcacgg
     4021 cgcggcccag cgacgttctt cgaatcgcta aacggaacta aggaagaaat cagcgtggac
     4081 ccatcgacgg ctgacggcct cgaactggtt cacatgctgg ttgatgcggc cgacgtggtg
     4141 ctcgaggcca gtcgacccag ggcattggct cactggggga tctccgctgc cgaagaggtg
     4201 caacgcggca cggtgtgggc ctcgatcacc ggctacgggc gaaccggtcc gaggtcgggt
     4261 ggggtggcct tcggggacga tgctgcagtt tccggaggac tgatgctgca cgacccgccg
     4321 ggcttcgtgg ctgatgctgt tcccgatccg gttaccggtt tgttagccgc cgtggcagtc
     4381 caggccgccc tggcggacgg ggttggtgcc ctcctggacc tctcgttggc cggtgtcgcc
     4441 tgttggctcg ccgatccgca agtagaccag agtgcggatt gaagcactcc aaagcgatga
     4501 agttctcgta ttcctgacgg agcatcagat accccttccg gcctaccatc agcccgtgag
     4561 cgaacagatg accgacgacg atgatgctca ggacctggac gatgatgccc agaacctgcg
     4621 agcgtccgat ggtcgggtgc ccgggcgccg aggtctggcc acccgccaga agatgcttga
     4681 tgccaccggc gtccttcttg acacggtggc ctaccgagac ctcaaagttg tcgacatcgc
     4741 ccgcgaggcc ggcacgtcgc cggccacctt ctaccagtac ttccctgacg tcgaagcggc
     4801 tgtgctggcc atggcgtccg acctcggcga cgcctggcac gaagatctct ccaagctcgt
     4861 caccaaccgg gactgggagg gcgaccccga cgggtcggcc caccgggtgg ctgacggcat
     4921 gctcgagttc tggaccctcc acaagccggt cctgcgggta ctggacatgg cttcgatgga
     4981 gggtgatctc cggttccggg agatccgggc caacctgctg gccggggcca ccgaggcgct
     5041 gatggacctg gcggctgaac ggcacattcc tggcgatccg atggcgtccg ccggtgtggt
     5101 cgtcgggatg ctggcccatg tggccaacca ccagcacggc cttgagcgtt ggggtgtctc
     5161 ccacgatgta ctggtggaca cggtggccgg gatcatccgc cgaaccatcc tcggggtggt
     5221 ctgatccctg agacctgacc cggagccacc tgacgggtca ccggtagtct ccatcgggtg
     5281 accccccgag ttcgcttcgc cccttctccc accggctacc tgcacgtagg tagtgcccgc
     5341 accgcactgt tcaactggct acacgcccgc tcgactggcg gcaccttcgt gttgcgtatc
     5401 gaggacaccg acgccgagcg gaaccgcacc gacctgaccg acagcctgct ggccgagctg
     5461 gaatggttgg gtctcgactg ggatgagggc ccgtacttcc agtccgaacg ctgcgaccgg
     5521 caccgagagg tcgtcgagga cctcctcggc cggggtctgg cctacctgtg tgacgcggac
     5581 aaccaggaag tggcgggatc gacactggtc gagggtctgg ccgtgcggtt ccggatgccg
     5641 gtcggagcga ccatggcctt cgccgacgtg gttcggggcg aggtctcgtt cgccaccgac
     5701 gacctcgagg acttcgtcat ctggcgctcg aacgggtcgc ccatgttcct gctggccaat
     5761 gcggtggacg acgcagacat gggcatcacc catgccattc gtggtgagga cctcttgtcg
     5821 ggggtgccca aggtcctcct cctattggat gccatcgggg tgtcccggcc cacctacgcc
     5881 cacctgcccc tactcgtcaa cgagcagcgc aagaagctct ccaagagacg agatgacgtg
     5941 tcgatcggcg actacaggtc ccgtggctat ctcccggagg ccatggtcaa ctacttggcc
     6001 ctattggggt ggggcccgcc tgatgacgtc gaggtcaggc cgctttccga aatcgtggaa
     6061 ctgttccgga tccaagacgt gaacaaggcg gctgccttct tcgacctcaa aaagcttgag
     6121 catgtgaacg ccagccatct aagagggttg tccaagccgg acttcatgga gcgggtggcc
     6181 ccctgggtcg gcaccgatgc gccatggccg gctgaccggt tcgacaccgg ccagttctcg
     6241 accatggtcg acctcgtcca ggagaagctt cggacgttga gcgacatgcc ccgattcgtg
     6301 gacttcctct tcctggagga tccggtcgat gatcccgact cctgggagaa ggtgatggtg
     6361 aagggtccat ctgctgccgc catgctcgat ggagcggcgg tggcgctgtc ggattgtgcc
     6421 tgggacaccg attcggtctt ggcagcagtc gctgctgtgg gggagtcgtt ggacctcagg
     6481 ctcgggaagg ctcaggcccc ggttcgggta gcggtgaccg gtcgcaccgt cggacctccg
     6541 ctgttcgaga cgatggccgt gtgcatggag cgcgacgagg tgcttcggcg gatcg
//
LOCUS       DASCMR010000329         3848 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001596825, whole genome shotgun sequence.
ACCESSION   DASCMR010000329 DASCMR010000000
VERSION     DASCMR010000329.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3848)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3848)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3848
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001596825"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1126
                     /gene="proS"
                     /locus_tag="QGG16_07815"
     CDS             <1..1126
                     /gene="proS"
                     /locus_tag="QGG16_07815"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR00409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004827 - proline-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006433 - prolyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HJP25217.1"
                     /translation="SGAMGGSASIEFMVESDAGEDDVAICDGCGYAANVERATAALEP
                     VENRSSGDAPQSFPTPGVRTIAALAELDHPAVHQIKTLVYKVDGVLTLVLLRGDHPFL
                     QQKFTDATGATEVVPADADEIKAALGASPGSLGAVGVTELPIYADEALRGRSGMTTGA
                     NVDDQHLEGVDVERDIAVDHWLDIRCILDGEACTTCGNALRVVRCIEAGHIFKLGRKY
                     ADAMGVTVLDVEGVNRVPTMGSYGIGVGRAMATVAETHHDEHGLIWPMSIAPYEVVLT
                     VVKVDHEESMAVAERLYGELQAAGVDVLLDDRDGRPGVKFADAELVGIPLRITIGPRG
                     LDNGQLEYTSRADGEKVDVPIDEVVARVVDAVVTGRSAGR"
     gene            1180..1560
                     /locus_tag="QGG16_07820"
     CDS             1180..1560
                     /locus_tag="QGG16_07820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25218.1"
                     /translation="MAKTIDRTLPIKRYKKVIATVDLPGVPEGTAGKVRVANGVTWYR
                     YWVDFDNGVRLGQVGHQQVCLATDWDAYRIDRAEAERRAAEAPEESADDGEGDSGSGA
                     AGNQFGVPEHLLERSKAARERLGA"
     gene            1658..2134
                     /locus_tag="QGG16_07825"
     CDS             1658..2134
                     /locus_tag="QGG16_07825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CarD family transcriptional regulator"
                     /protein_id="HJP25219.1"
                     /translation="MFKPGDKVVYPHHGAAVIVKKEKKKAFGENTEYLVLEMAHGELT
                     LSVPVDKAEDVGMRWPIDKDDVEDLFEVLQKRDIREPANWSRRFKNHQEKLKSGDVYQ
                     VAEVVRNLALRDQAKGLSAGEKTLYTKALSVLVSELAFALNTPEEKAIAKVEEALS"
     gene            2230..2694
                     /locus_tag="QGG16_07830"
     CDS             2230..2694
                     /locus_tag="QGG16_07830"
                     /inference="COORDINATES: protein motif:HMM:NF012791.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HJP25220.1"
                     /translation="MGDGSDRRIVVGIEGSGYAREALIWAIEEAHHRGAMVEVVTCFS
                     PTYVPAAPDLGYVPLDSFDLATEVDKMQGEVIESALEASKYGDEVEVRRTLKKGRPAD
                     TLMASAEGASMLVVGNRGRGGFAGLRLGSVSQAIAHHSPCPLVIVRSGLDTD"
     gene            2970..3512
                     /locus_tag="QGG16_07835"
     CDS             2970..3512
                     /locus_tag="QGG16_07835"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: protein motif:HMM:NF013222.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HJP25221.1"
                     /translation="MIGTEEDFDEQPVDKIAKVAGPVGGLWIAWNDHGISGASFANTT
                     TFARFREEHHDRTGRGAARAETMPDDLFDAIEYSFTTGDRSDLTFDLRGATPFQMSVW
                     EACLAIPAGTTHTYADLARAIHRPRAVRAVGTALGANPIPVLIPCHRVLRTDGSLGGY
                     AFGLPIKERLLEREAVRAAA"
     gene            3576..>3848
                     /locus_tag="QGG16_07840"
     CDS             3576..>3848
                     /locus_tag="QGG16_07840"
                     /inference="COORDINATES: protein motif:HMM:NF012596.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HJP25222.1"
                     /translation="MTELDPAEGGVTTEVRGRILLIGLDRPAKMNGYTPQMARQLVDA
                     FERLDTDDDLLCGVLFGHGAHFTAGLDLPKFHGGMKEGRRSTSGRID"
BASE COUNT          747 a         1284 c         1216 g          601 t
ORIGIN      
        1 gtcgggcgct atgggcggca gcgcctcgat cgaattcatg gtcgagtccg acgccggcga
       61 ggacgacgtg gcgatctgtg atggatgtgg atacgccgcc aacgtggagc gggccactgc
      121 ggcgctcgaa cctgtggaga accgctcgtc cggcgacgca ccgcagagct ttccgacgcc
      181 tggagtgcgg accatcgcag cactcgccga actcgaccat ccggcggtcc atcagatcaa
      241 gacgctcgtc tacaaggtcg atggagtgct cacgttggtc ctgctgcggg gcgaccatcc
      301 gttcctgcag cagaaattca ccgatgccac cggagccacc gaagtggtgc ctgccgacgc
      361 agacgagatc aaggcagccc tcggcgcgtc accgggcagc ctcggcgcgg tcggcgtgac
      421 cgaactgccc atctatgccg acgaggcact tcgtggccgg tccggtatga ccaccggggc
      481 caacgtcgac gaccagcacc tcgaaggtgt cgacgtcgaa cgcgacatcg ccgttgacca
      541 ctggctagac attcgctgca tcctcgacgg cgaagcttgc accacctgcg gcaatgccct
      601 gcgggttgtc cggtgcatcg aggccggcca catcttcaag ctgggtcgca aatacgcgga
      661 tgcgatgggg gtcaccgtcc tggacgtcga aggcgtcaac cgagtgccga ccatggggtc
      721 ctacggcatt ggcgtgggcc gggccatggc caccgtcgcc gagacccacc atgacgaaca
      781 cggcctgata tggcccatgt cgatcgcccc gtacgaggtg gtcctgaccg tggtaaaggt
      841 cgaccacgag gaatcgatgg ccgtcgccga acgcctctac ggagaactcc aggccgccgg
      901 cgtcgacgtt ctactcgacg accgagacgg tcgtccgggc gtgaagttcg ccgatgccga
      961 actggtcggc atcccactgc ggatcaccat cgggccccgc ggcctggaca acggacaact
     1021 ggaatacacc agccgggccg acggcgagaa ggtcgacgtg cccatcgacg aagtggtggc
     1081 ccgagtggtc gacgctgtcg tcaccgggcg gtcggcgggc cgctagcgtt gccgccacct
     1141 gcccactgaa accagccacc tgagactccc gggaatccca tggccaaaac cattgatcgc
     1201 acgctgccca taaagcgcta caagaaagtc atcgcaaccg tcgaccttcc cggcgtcccc
     1261 gagggcacag ccggcaaggt ccgggtggcc aatggcgtga cctggtatcg ctactgggtc
     1321 gactttgata acggcgttcg gctcggacag gtcggccacc aacaggtctg cctggccacc
     1381 gactgggacg cataccggat cgaccgggcc gaagcagaac gacgtgccgc cgaggctcca
     1441 gaggaatccg ccgacgacgg cgagggcgac agtggcagcg gagcggccgg caaccagttc
     1501 ggtgtgcccg agcacctgct cgaacgaagc aaggcggccc gcgagcgtct cggagcctga
     1561 tcggtccgac ccctcgagcc aactcattcc cagctcgtcc accgtctcac ggcggtatcc
     1621 tgaatgctcc cccccagcag ccccggaggc cccctcgatg ttcaagcccg gcgacaaggt
     1681 cgtctatccg caccacggtg ctgcggtcat cgtcaagaag gaaaagaaga aggccttcgg
     1741 cgagaacacc gagtacctgg tgctcgagat ggctcacggc gaactgacgc tgtcggttcc
     1801 ggtcgacaag gccgaagacg tcggcatgcg ctggccgatc gacaaggacg acgtggagga
     1861 cctgttcgag gtgctccaga agcgggacat ccgcgagccg gccaactggt cgcgacggtt
     1921 taagaaccat caggaaaagc tcaagagcgg tgacgtctac caggtcgccg aagtggtccg
     1981 aaacctcgcc ttgcgcgacc aggccaaggg cctgtcggcc ggtgaaaaga ccctctacac
     2041 caaggccctc agtgtgctgg tgtccgaact ggccttcgcg ttgaacacgc cggaagaaaa
     2101 ggccatagcc aaggtcgaag aagccctctc ctgagctagc acccggccca ccaatgcccg
     2161 ggaccccgac cgttttcctg tcctacactt gcggataggt agtcggggac caagacggag
     2221 gcatacctga tgggtgacgg gtccgaccgg cgcatcgtcg tcggcatcga aggttcgggg
     2281 tacgcccgcg aggcgttgat ctgggctatt gaagaagccc accatcgagg cgccatggta
     2341 gaagtggtga cgtgcttctc ccccacctac gtacccgccg cccccgatct ggggtacgtc
     2401 ccgctggatt cgttcgacct ggcgaccgaa gtcgacaaga tgcagggcga ggtcatcgaa
     2461 tccgcccttg aggcctcgaa atacggggat gaggttgagg ttcggcgcac cctgaagaag
     2521 ggccggcctg ccgacaccct catggcctcg gccgaaggtg cgtccatgct ggtggtcggc
     2581 aaccggggac gaggcggatt cgccggactc cgcctgggct cggtcagcca agccatcgcc
     2641 caccacagtc cgtgtccgct agtcatcgtc cgatcaggcc ttgacaccga ctgaccgggt
     2701 tgcccactca gtcgggtgac tcaaccggcc actcaaccag ttagcgcggc aagcattcgc
     2761 ggcgcccggg cctcagcgaa cacctgcacc aggtcgacag gtggggcacc cgaatagcgt
     2821 cgcttctcca tctcctctga taccagccga atcaccatgc cgccagacgc gctggtcccg
     2881 tcgcttttca gccagtagcg agatgcacgc aacagggttg tacgcgagag tgggtagttc
     2941 acacccacga ccctcgaagg gggacttgca tgatcggcac cgaggaggac ttcgacgagc
     3001 aacccgtcga caagatcgcg aaggttgccg gaccagtcgg aggcctctgg atcgcatgga
     3061 acgaccacgg catctcgggg gcgagtttcg cgaacaccac caccttcgcc cggttccgtg
     3121 aggagcacca tgaccgcacc ggccgtggag ctgcacgcgc tgagaccatg ccggacgact
     3181 tgttcgacgc catcgaatac tccttcacta ccggcgaccg cagcgacctg accttcgacc
     3241 ttcgtggtgc cacgcccttc cagatgtcgg tctgggaggc ctgcttggca atcccggcgg
     3301 gaaccaccca cacctatgcg gatctggccc gggcgatcca tcgccctagg gcagtccgag
     3361 ccgtgggaac agcactgggc gccaacccca tcccggttct gatcccgtgc caccgagtgc
     3421 ttcgcaccga cggcagcctc ggcggctacg cgttcggcct gcccatcaag gaacgcctgc
     3481 tggagcgcga ggcggtgcgg gccgccgcct gatccgtcgg ggaccctccc ggtcgtccag
     3541 acttcgggtc aaacgcacga cacggaggac ccaccatgac cgaactcgat cccgccgaag
     3601 gcggagtcac caccgaggta cgtggtcgga tcctgctcat cgggctggac cgaccagcca
     3661 agatgaacgg ctatacgcca cagatggccc gtcagttggt cgacgccttc gagcgtctcg
     3721 acactgacga cgacctgttg tgcggggtgc tgttcggcca cggcgcccac ttcacggcag
     3781 ggctggacct cccgaagttc cacggcggca tgaaggaagg gcgacgatcg actagtggcc
     3841 gcattgac
//
LOCUS       DASCMR010000330         1843 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001597328, whole genome shotgun sequence.
ACCESSION   DASCMR010000330 DASCMR010000000
VERSION     DASCMR010000330.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1843)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1843)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1843
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001597328"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            42..1253
                     /locus_tag="QGG16_07845"
     CDS             42..1253
                     /locus_tag="QGG16_07845"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HJP25223.1"
                     /translation="MEFGIFSNGYTPGPAAHDSESEHTELMREAEYAILADKHNWKYI
                     WFGEHHGLVEYSHMSAPAPMMGWVAAQTDYIHIGSAITSLPTKKEHPVRIAERAAMLD
                     HVTNNRFEFGTGRGAGSHELRTFNVMDPSETKAQWDEVIHEIPRMWEQKDYDFDGEFF
                     TVPTPHNILPKPYGPGHPPIWVACGNPPTFAKAGSMGIGAIAFNFEPIHNLKGRVDAY
                     KEAIQDPIDQIGQYKNDNVMMTNACICLEDRDEARAVAMAKGRGYLVTMVNMYHDTMP
                     KSPDAIVWPNAPMDPGWTEELLDMAIDGGYMLCGNPEEVCEQLNRYRDVGCDQVVFGL
                     PTEGLTHDQTLEMIELFGDQVIPEHDGDRVHSTDRYRATAERQFPDFGYPVPEGIDVS
                     IIPTTALLSLG"
     gene            1298..>1843
                     /locus_tag="QGG16_07850"
     CDS             1298..>1843
                     /locus_tag="QGG16_07850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25224.1"
                     /translation="MARDGTETRTRLLMEAERLFAEVGVWQAATGDIVRSAGQRNASA
                     LTYHFGSREGALDAILAEHGNPVDQRRGELLSNLEGGPTTDTPAVRDLVSTLVRPMTA
                     VLDDPRGRRYVRIIAQLSDRFPAWRDAPSGVDQTHLERALDLLEGVAAGDGPAAREAR
                     LLAMIQLMTVSLAARAGEMEHR"
BASE COUNT          371 a          668 c          546 g          258 t
ORIGIN      
        1 atactaatga catccattag atcaccacgg cgagcaactt catggaattc ggcatcttca
       61 gcaacggcta caccccgggc cccgctgctc acgactcgga aagcgagcac accgaactga
      121 tgcgggaggc tgagtacgcc atcctcgccg acaagcacaa ctggaagtac atctggttcg
      181 gcgagcacca cgggctagtc gagtacagcc acatgtcggc ccccgccccg atgatgggct
      241 gggtagccgc ccagaccgac tacatccaca tcgggtcggc catcaccagt ctcccgacca
      301 agaaggagca cccggtccga atcgccgagc gggccgccat gctcgaccac gtcacgaaca
      361 accggttcga gttcggcact ggtcgggggg ccggaagcca cgagctccgg accttcaacg
      421 tgatggaccc gagcgagacc aaggcccagt gggacgaggt catccacgag atcccgcgga
      481 tgtgggaaca gaaggactac gacttcgacg gcgagttctt caccgtgccc accccacaca
      541 acatcctccc caagccctac ggccccggcc atccacccat ctgggtggcc tgcggcaacc
      601 cgccgacctt cgccaaggcc ggctccatgg gcatcggcgc catcgccttc aacttcgaac
      661 ccatccacaa cctcaaaggc cgggtcgacg cctacaagga ggccatccag gacccgatcg
      721 accagatcgg ccagtacaag aacgacaacg tcatgatgac caacgcctgc atctgcctgg
      781 aggaccgcga cgaagctcgg gccgtggcca tggccaaggg ccgcggctac ctggtgacca
      841 tggtcaacat gtaccacgac accatgccca agtcgcccga cgccatcgtc tggcccaacg
      901 cacccatgga tccaggctgg accgaggaac tcctcgacat ggccatcgac ggtggctaca
      961 tgctctgcgg caaccccgag gaggtctgcg agcagctcaa ccgctaccgg gacgtgggct
     1021 gcgaccaggt ggtcttcggc ctgcccaccg agggcctcac ccacgaccag accctcgaga
     1081 tgatcgagct gttcggcgac caggtcatcc ccgagcacga cggcgaccgg gtccactcca
     1141 ctgaccgcta tcgggccacc gccgagcgcc agttccccga ctttggttac ccggtgcccg
     1201 aaggcattga cgtgtcgatc atcccgacca ccgccctgct ctccctgggc tgacgtccga
     1261 acccgaccgg aaccgccgaa ccggaaacag gcgcgccatg gcccgcgacg gaaccgaaac
     1321 tcggacccga cttctaatgg aagccgagcg tctcttcgcc gaggtcggag tctggcaggc
     1381 cgccactggc gacatcgtcc gctccgccgg ccaacgcaac gcctcggcgc tgacatatca
     1441 cttcgggtca cgtgaggggg cgctcgacgc catcctcgct gagcacggca acccggtcga
     1501 ccagcggcgg ggcgaactgc tgagcaacct tgagggagga cccaccactg acaccccggc
     1561 tgtgcgggac ctggtgtcga ccctggtgcg acccatgacc gccgtgctgg acgacccacg
     1621 gggacgccgc tacgtgcgga tcatcgccca actctcggac cgcttcccgg cctggcggga
     1681 cgccccgtcg ggcgttgacc agacccatct ggaaagggcc ttggacctct tggagggggt
     1741 ggccgccggc gacggaccgg cggcacgcga ggcccgcctg ctggccatga tccaactcat
     1801 gacagtgtca ctggccgccc gggccggtga gatggaacac cgg
//
LOCUS       DASCMR010000331         4832 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001605897, whole genome shotgun sequence.
ACCESSION   DASCMR010000331 DASCMR010000000
VERSION     DASCMR010000331.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4832)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4832)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4832
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001605897"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            70..1347
                     /locus_tag="QGG16_07855"
     CDS             70..1347
                     /locus_tag="QGG16_07855"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013670.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HJP25225.1"
                     /translation="MPGQPPLSVTVLVAITAVALLAGAVPAGAVGNGSGGSTEARIVK
                     GPDDMLLPVVGQFAGSTVVSSTCGREVVYEDGVPVDAASPIDVVLDAGHGGPESGSVG
                     ANGLVERDLNLIVAFHTKLALEEMGHTVALTRRRDLHMPIRQRTAIARALDPRAFVSI
                     HHNGGAVKRSEMPGTEVFHQIDVPESQRLAGLLFEEVQAVFTGYWVPWVSTYHQGVSA
                     RLREPRTDTYGVLRMTRGIPSAIVEGLYLSNPPEAQLLALPEIQQAEGKAIATAIDRF
                     LTTEDPGSGFKAEFYDPHTTGTGTARGCEDITYTEPVEITTGFTAAEHADLLATARSM
                     GRPVDWLIRFGVYTLKFLGDLPGAATIVPLAEEDRPDAYGPVTESVTWDQAEQVVLVR
                     MAEAYGLTRTEVQKLATSLMVFLANLPSTQDPA"
     gene            complement(1364..1780)
                     /locus_tag="QGG16_07860"
     CDS             complement(1364..1780)
                     /locus_tag="QGG16_07860"
                     /inference="COORDINATES: protein motif:HMM:NF012684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor-like protein"
                     /protein_id="HJP25226.1"
                     /translation="MGDGDRTLWGGPGCRVSAEEVRWRFGPSGGPGGQHANRANTRVE
                     AELDLTLARGIDDQTRARLVRQLGATVRVVVDRHRSQVRNRERALDEIERRLQEALVE
                     QAVRRPTRPRRGAVERRLEAKRQRGARKAERRGDWS"
     gene            1866..3326
                     /locus_tag="QGG16_07865"
     CDS             1866..3326
                     /locus_tag="QGG16_07865"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF025114.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HJP25227.1"
                     /translation="MTNGRRPLRFVVIGAGMAGILAVIRLRDRGFNDIAVYEKADRLG
                     GTWRENNYPGVACDVPSILYSYSFAPNPEWTHRFSPGAEIQSYLEDVARRFDVERSIT
                     YGQEVVHAEHDGDRWHLRTASGRTDVADVVIAATGVLHHPFVPGLEGLDDFAGDVVHT
                     ARWDASVLLDGRKVGIIGTGSSAVQTVGAVVDGVGELALFQRTAQWVLPQDNPAYTEE
                     EKAGFRADPDSQRQLHDEISELFADGFANAVVDADSPVLAHIAELCRDHLDTVVDVDL
                     RTRLTPDHRAACKRLVISGDFYEAIQRPHVRLVDANIDQIEAGGIRTTDGVLHELDVL
                     VLATGFRVDRFMRPMEVVGPIGDRLSEAWAERPTAYLSIGVPGLPNLFMLNGPNGPVG
                     NFSLIEVAELQMDYALQLVDRIADGTCRLISPSTDATEAHEAARTAAAGKTVWATGCN
                     SWYLDDRGVPMAWPWSFREFRAQMAAPDMDSYVLTD"
     gene            3353..4435
                     /locus_tag="QGG16_07870"
     CDS             3353..4435
                     /locus_tag="QGG16_07870"
                     /inference="COORDINATES: protein motif:HMM:NF012517.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HJP25228.1"
                     /translation="MSVRLAMGLPGVRLSAVEANHFLSSYYPDTSYGGKRLFNDMVEQ
                     AVTAERLGYRGVTLPEHHLINVLLMPAPLQMAVKLACETEHLELVTSVAVLPLHDMRI
                     FAGEVVQADILTDGRLVLGVGRGAFAYEMARLGTPIVESKAKFDESLDVLIALLTEEE
                     VSWDGEYYRFEPMTVMPRPMTQPMPKLMVAVMNPTGIAACTKRGFDIQTTPLAGRPEL
                     FEAQIAAHKEAKAEMGDAGRHLRIMMSRVVYCTGSEAETRRMVQMAHDYYGRFDNVFT
                     GPGIVNHGDVAQLPRDQSIEELEENLVICQTDEMIDRLALYAAAGIDELILSSNLGQR
                     QGEHLEAMERFASDVLPHLQRIAAAA"
     gene            4490..4675
                     /locus_tag="QGG16_07875"
     CDS             4490..4675
                     /locus_tag="QGG16_07875"
                     /EC_number="5.3.2.6"
                     /inference="COORDINATES: protein motif:HMM:NF002571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016862 - intramolecular oxidoreductase
                     activity, interconverting keto- and enol-groups [Evidence
                     IEA];
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxymuconate tautomerase"
                     /protein_id="HJP25229.1"
                     /translation="MPIIRVEMFPGRTIDQKRDLARELTDGFVRACGGAGEKLHVVIT
                     EVERENWGVGGELMSDK"
BASE COUNT          884 a         1651 c         1484 g          813 t
ORIGIN      
        1 cgcgcggtac ggccccggct ctggtcgggg tcgtaccgcg tccggagccc gaccccctag
       61 cgtcacacca tgcccggtca gccccctctc agcgtcaccg ttctggtggc catcaccgcc
      121 gtggctctcc tggcaggtgc ggtgccagcg ggtgccgtcg gaaatgggag cggcggctca
      181 actgaggcga ggatcgtgaa gggccccgac gacatgctgc tacccgtagt gggccagttc
      241 gctggctcga cggtggtgag tagcacgtgt ggccgtgagg ttgtctacga ggacggtgtt
      301 cccgttgacg cagcatcacc gatagacgtg gtgcttgatg ccggtcacgg cggcccagag
      361 tccggttcgg tgggagccaa cggcctggtc gagcgtgacc tgaacctcat agtggcgttc
      421 cacacgaagc tggccctcga ggagatgggc cacacggtgg ccctgacgcg gcgacgagac
      481 ctccatatgc ccatccgtca acggacggcc atcgcccgag cgctcgaccc ccgggcgttt
      541 gtctccattc accacaatgg aggtgcggtc aaacgatccg agatgcccgg gacagaggtg
      601 ttccaccaga tcgacgtccc ggagtcgcaa cgcctggcgg gcctgctatt cgaggaagtc
      661 caggccgtct tcaccggcta ctgggtgccg tgggtcagca cctaccacca aggcgtatcg
      721 gcccgtctac gcgagccgcg caccgacacc tacggggtgc tgaggatgac ccgcggcatt
      781 ccgtcagcca tcgtcgaagg cctctacctg tccaacccgc cggaagccca attgctggca
      841 ctgccggaga tccaacaagc tgaggggaag gccatagcca cggctatcga ccggttcctg
      901 accaccgagg accccggctc gggtttcaag gctgagttct acgatccaca caccacggga
      961 accggcacgg cgcggggttg tgaggacatc acctacaccg agccggtcga gatcaccaca
     1021 gggttcaccg ctgccgagca cgctgacctc ctggccaccg cccgctccat gggccgacca
     1081 gtcgactggt taattcgctt cggggtatac acgttgaagt tcctaggcga tctgcccggg
     1141 gcggcgacaa tcgttccgtt ggccgaggaa gaccggcctg atgcctacgg tccggtcacc
     1201 gaatcggtca catgggacca agccgagcaa gtcgtcctgg tgcgcatggc cgaggcctac
     1261 gggctaaccc gcaccgaggt tcagaagctg gccacttccc tcatggtctt cctggccaat
     1321 ctcccttcga cccaggaccc cgcctaaatc cggcccagac tgatcaagac cagtcgccgc
     1381 ggcgttcggc cttgcgggcg ccacgctgac gtttggcttc taggcgccgc tccaccgcac
     1441 cgcgccgcgg tcgagtcggt cggcgcactg cctgttccac cagcgcctcc tgcaggcgcc
     1501 gctcgatttc gtcgagtgcc cgctcacggt tccgaacctg agagcgatgc cggtcgacta
     1561 ccacccgcac cgtggccccc agttgacgca caaggcgggc acgggtctgg tcgtcgatcc
     1621 cccgggccaa cgtcaggtcc agctcggcct ccacacgggt gttggcccgg ttggcgtgtt
     1681 gtccgccggg gccgcctgat ggtccgaaac gccaacgcac ctcctcggca gacacccgac
     1741 aacccggacc cccccacagc gttcggtctc catcgcccac gttccgacgc tacggcccgg
     1801 agtgccatcg gctggcggat cctgccgact ggcccttgcc cgtccgaccc tgctggactc
     1861 cggcgatgac caacggccga cgaccactgc gtttcgtggt catcggcgcc gggatggctg
     1921 ggatactggc ggtcatccgt ctgcgggatc gaggcttcaa cgacattgcc gtctacgaaa
     1981 aggccgaccg tctcggcggc acttggaggg agaacaacta ccccggcgtg gcgtgcgacg
     2041 tgccgtccat cctttacagc tactcgttcg cccccaaccc tgagtggaca caccgcttct
     2101 caccaggggc cgagatccag tcctatctag aggacgtggc cagacgcttt gacgtcgaac
     2161 ggtccatcac ctacggccag gaggttgtcc acgcggagca cgacggcgac cgctggcacc
     2221 tccgaaccgc ctcagggcga accgacgtgg ccgacgtggt catcgcggca accggcgtac
     2281 tccaccatcc attcgttccc ggcctcgaag gcctggacga cttcgccggc gacgtggtcc
     2341 acaccgcccg atgggatgca tcggttctgc tggacggccg gaaggttggc atcatcggca
     2401 ccgggtcttc agcggtccag acggtcggcg cggtggtcga cggggtgggt gaactggcgc
     2461 tcttccagag gacggcccaa tgggtgctcc cgcaggacaa tccggcctac accgaggagg
     2521 agaaggcagg tttccgggcc gaccctgact cacagcgcca actccacgac gagatctccg
     2581 aactattcgc tgacgggttc gccaacgctg tggttgacgc cgactccccg gttctcgccc
     2641 atatcgccga actctgccgt gaccacctcg acacggtggt cgatgtcgac ctgcggaccc
     2701 ggctgacccc ggaccatcgg gcggcctgca agcgactcgt catctctgga gacttctacg
     2761 aagccatcca gcgaccccac gtccgtctcg ttgacgccaa catcgaccag atcgaggcgg
     2821 gaggcattcg caccactgac ggcgtgctcc acgaactaga cgtgctggtg ctggccaccg
     2881 gctttcgagt ggaccgcttc atgcgaccca tggaggtggt gggacccatc ggcgaccgcc
     2941 tatctgaagc atgggccgaa cggcccacgg cctacctttc aatcggcgtg ccgggactgc
     3001 caaacctgtt catgttgaat ggtcccaacg gtcccgtcgg aaatttctca ctcatcgagg
     3061 tggctgaact gcagatggat tacgcactcc aactcgtcga ccggattgcc gacggcacat
     3121 gccgcctgat ctcaccgtca actgacgcca ccgaggccca cgaggcggcc cggacggcgg
     3181 cagccggaaa gacggtgtgg gccaccgggt gcaacagctg gtacctggac gaccgggggg
     3241 tgcccatggc ctggccgtgg tcgttccgtg agttccgggc tcagatggct gcccccgaca
     3301 tggattccta cgtcctgacc gactgaacca cggggaacga tcgaccttcg ggatgagcgt
     3361 gcgattggca atggggctgc ccggcgtcag actctccgct gtggaagcca accactttct
     3421 ctccagctac tacccggata cctcctacgg gggtaagcgt ctgttcaacg acatggttga
     3481 gcaggccgta actgccgagc gcctcggcta ccggggagtc acgctgcccg agcaccacct
     3541 catcaacgtg ctactcatgc cggcgccgtt gcagatggcg gtcaagcttg catgcgaaac
     3601 cgaacacctc gaactggtca cctcggtagc cgtcctcccg ctacacgaca tgcgaatatt
     3661 cgccggcgaa gtcgtccagg ccgacatcct caccgacggc cgactggtac tcggcgtagg
     3721 tcgtggtgcc ttcgcctacg agatggcccg cctcggtacc ccaatcgtcg aatccaaggc
     3781 caagttcgac gaaagcctcg atgtcctcat cgccctactc accgaggagg aggtctcatg
     3841 ggacggcgag tactaccggt tcgaaccgat gaccgtgatg ccccgtccca tgactcaacc
     3901 catgccgaag ctgatggtgg cggtgatgaa tccaacaggg atcgccgcct gcacgaaacg
     3961 agggttcgac atccagacca ccccactggc aggccggccc gagttgttcg aggcccagat
     4021 cgccgcccac aaggaggcca aggcagagat gggcgacgct ggacgccacc tccggatcat
     4081 gatgtcaagg gtcgtgtact gcaccgggtc cgaggctgag acccgacgga tggtccagat
     4141 ggcccacgac tactacggcc ggttcgacaa cgtgttcacc gggccgggca tcgttaatca
     4201 cggtgacgtg gcacagcttc cccgcgacca gagcatcgag gagctcgagg agaacctggt
     4261 catctgccaa accgacgaga tgatcgaccg actggccctg tacgccgcgg cgggcatcga
     4321 cgaattgatc ctgagttcca acctcggcca acgccagggc gagcacctcg aggccatgga
     4381 acgcttcgcc agcgacgtcc tcccccacct gcaacggatc gccgctgctg cctgaggcag
     4441 aatctgtcag atccagccac cagatcacgc ccccttcagg aggaagccca tgcccatcat
     4501 ccgagtcgaa atgttccccg gtcgcaccat cgaccagaaa cgtgacttgg cccgcgagct
     4561 cactgacggt ttcgtccggg cgtgcggcgg agctggcgag aagctccacg ttgtcatcac
     4621 cgaggtggag cgcgagaact ggggcgtcgg cggcgagctg atgtctgaca agtaagtcgg
     4681 ccaaccggca aggagagcta caccatgggc gccatcgagg tctcctacac cgtctccggt
     4741 aacgggccgc cgctctacat ggtccacggg atcggcagcc gtcgagaaac gtgggatggc
     4801 ctgctccccg agctcgaaga gcacttcacc tg
//
LOCUS       DASCMR010000332         1818 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001626203, whole genome shotgun sequence.
ACCESSION   DASCMR010000332 DASCMR010000000
VERSION     DASCMR010000332.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1818)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1818)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1818
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001626203"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..294
                     /locus_tag="QGG16_07880"
     CDS             <1..294
                     /locus_tag="QGG16_07880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015799287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043039 - tRNA aminoacylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid--tRNA ligase-related protein"
                     /protein_id="HJP25230.1"
                     /translation="GWVERFEGIVAGRELCNAFSELVDPDEQRARFVAQEAEKAAGDA
                     EAMAVDEDYLRALEYGLPPTGGLGIGMDRLVMFLTGTTTVRDVILFPTLRPEQ"
     gene            complement(317..1333)
                     /locus_tag="QGG16_07885"
     CDS             complement(317..1333)
                     /locus_tag="QGG16_07885"
                     /inference="COORDINATES: protein motif:HMM:NF012568.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HJP25231.1"
                     /translation="MASVSPAITGVSVNRLLDLPGMADALARTEAELRTVVESGDPFL
                     TEVARHLIDAGGKRVRPALTVTAAQVLDADPGVASHDVIRGGVAVELVHQGSLYHDDV
                     MDGAETRRTVQSVNARWGNPEAILAGDYLLARASEIAADLGTEVAGLLASTIASLCEG
                     QVRELRHAFDVDRTEEAYLASITGKTASLLSTAARVGAIVAGHHREVIEALTDFGHHY
                     GMAFQVVDDLLDVVATDDQLGKPAGNDLVEGTYTLPVIRALAGPSGSELRDLLGGPID
                     AATRDRVRDVIRTDEAIGATRDTAIEFLGSARGALDGLPANPSVGTMQATCDLLLDRL
                     DGSF"
     gene            1509..>1818
                     /locus_tag="QGG16_07890"
     CDS             1509..>1818
                     /locus_tag="QGG16_07890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003419511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease N-terminal domain-containing
                     protein"
                     /protein_id="HJP25232.1"
                     /translation="MFERFTDRARRVVVLAQEEARLLNHNYIGTEHILLGLIHEGEGV
                     AAKGLESLGISLEAVRSQVEELIGHGASSPSGHIPFTPRAKKVLELSLREALQLGHNY
                     I"
BASE COUNT          312 a          574 c          640 g          292 t
ORIGIN      
        1 ggctgggtag aacgcttcga ggggatcgtc gctggtcgtg agctctgcaa cgccttcagt
       61 gaactggtgg accccgacga gcagcgggct cgcttcgtgg cccaggaggc cgagaaggcc
      121 gcgggtgatg ccgaggccat ggccgtcgac gaggactatc tgcgggcact ggagtatggg
      181 ctgccaccca ccggtgggtt ggggatcggt atggatcgtc tggtcatgtt cttgactggc
      241 acgaccacag tccgcgacgt gatcctcttc ccgacactca gaccggagca ataggacctg
      301 agtaacaggt cctgagttag aacgacccgt cgaggcggtc caacagcagg tcgcaggtgg
      361 cctgcatggt gccgaccgac gggttggccg gcagcccgtc gagcgcccct cgggccgagc
      421 ccagaaattc gatagcggtg tcgcgggtgg ccccgatggc ctcatcggtc cggatcacgt
      481 cacgcacccg gtcccgggtg gcggcgtcga tcggtccgcc cagcaggtcc cgtagctcgc
      541 tacccgatgg tccagccaga gcccggatca cgggcagcgt gtaggtgccc tccactaggt
      601 cgttgccggc tggcttgccc agctgatcgt cggtggcaac cacgtcgagg aggtcgtcaa
      661 ccacctgaaa ggccatgccg tagtggtggc cgaagtcggt cagcgcctcg atcacctcac
      721 ggtgatggcc ggccacgatg gctccgaccc gggccgcggt ggacagcaat gaggcggtct
      781 tgccggtgat cgaagccagg taggcctctt cggttcggtc cacgtcaaag gcatggcgaa
      841 gctcgcgaac ctgaccctcg cagagtgagg cgatggtcga ggccagcagt ccggccacct
      901 cggtacctag gtccgcggcg atctccgagg cgcgggccag caggtagtcg ccggccagga
      961 tggcctcggg gttgccccag cgggcgttca cgctctggac ggtgcgtcgg gtctcggcgc
     1021 cgtccatcac gtcgtcgtgg tacagcgatc cctggtgcac cagctcgacg gccactccgc
     1081 cccggatgac gtcgtgggag gccacgccag gatcggcatc cagtacctgg gcggcagtga
     1141 cggtcagtgc gggacggact cgtttgccgc cggcgtcaat gagatggcgg gccacctcgg
     1201 ttaggaaggg gtcgccagat tccacgacgg ttcggagttc agcttcggtg cgggccaacg
     1261 cgtcggccat cccgggaagg tctagaagtc ggttcaccga cacgccggtg atcgctgggg
     1321 agacggaagc cacccggtga ggatacggcg ccgcccgttc cgggcgaaac ggacccgccc
     1381 cggaggggaa tcccggggtg ggaaacgcgc caatggggcg tcacgggcca ccggtacact
     1441 ttgaaatgac gggggagacg tcaccagagc tggcagagcc agttcactga gcgcaggagg
     1501 catcggcgtt gttcgagcgt ttcaccgata gggcccgcag ggtcgtggta ctcgcccagg
     1561 aagaggcgcg gctgctcaac cacaactaca tcggcaccga gcacatcctg cttgggctaa
     1621 tccacgaggg tgagggcgtg gctgccaagg gcctcgaatc gctgggcatc tcgctggagg
     1681 ccgtccgcag ccaggtcgag gagctcatcg gtcacggtgc cagctcgccc agcggccaca
     1741 tcccgttcac tccccgggcc aagaaggtcc tggaactctc gctgcgcgag gcgctccaac
     1801 tggggcacaa ctacatcg
//
LOCUS       DASCMR010000333         5295 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001632968, whole genome shotgun sequence.
ACCESSION   DASCMR010000333 DASCMR010000000
VERSION     DASCMR010000333.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5295)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5295)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5295
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001632968"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..503
                     /locus_tag="QGG16_07895"
     CDS             <1..503
                     /locus_tag="QGG16_07895"
                     /inference="COORDINATES: protein motif:HMM:NF039482.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NAD(+)/NADH kinase"
                     /protein_id="HJP25233.1"
                     /translation="LLRVVLYLAGASATAPEVIDHALNEVVVERGAGGQTIRVGVSLD
                     GESFTSYAADGLIAATPTGSTAYAFSARGPIVDPLHRAIQLTPVSPHMLFDRTLVLEP
                     STEVGMEVLGRRAATCTVDGRSVADLAGGDRVMCTAADRVVRLVTFGPRDLRGLLVNR
                     FGLADR"
     gene            647..2236
                     /gene="recN"
                     /locus_tag="QGG16_07900"
     CDS             647..2236
                     /gene="recN"
                     /locus_tag="QGG16_07900"
                     /inference="COORDINATES: protein motif:HMM:TIGR00634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HJP25234.1"
                     /translation="MLAELRITGLGVIDEVEVVFGPGLTALTGETGAGKTMVMGAVEL
                     LLGGRADPSIVRPGATEAVVEGRFILGDGAGDREHVLRRVVPVEGRSRAYVDGHLETA
                     ASLAEVAGRLVDLHGQHAHQRLLGAAAQREALDRFGAIDLTPLADTRRRLAEIDAELA
                     SFGGDDRARAREIDLLRFQVAELDAAGLADPTEDDRLAAEELLLGDAVAHREAAAAAL
                     ELLDGDGPASDAVGRALAALDGRSPFAPAMGRLAGLAAELGDVASDLRGIAEGLEEDP
                     ARLEVVGERRRLLAELRRKYGDDLGSVMAYQSDVSDRLKALEDHEARAATLDAERLAV
                     EAACAEAAATVRSARRRAAPGLADRVCEHLRALAMPTATVEVGVDGEAGEEVEFRLAP
                     NSGSSMLPLVRVASGGELARTMLAVGMVLTASPPVQLFDEVDAGVGGEAAHRIGEALA
                     ALATDRQVLVVTHLAQVAAYADHQMLVAKFDDGHSTAASVRPLDADERVVELSRMLSG
                     SPDSETARGHATELLHAARGL"
     gene            2328..3995
                     /locus_tag="QGG16_07905"
     CDS             2328..3995
                     /locus_tag="QGG16_07905"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HJP25235.1"
                     /translation="MTKHIFVTGGVASSLGKGLTAASLGRLLKQRGLRVVIQKLDPYI
                     NVDPGTMNPFEHGEVFVTDDGGETDLDLGHYERFIDENLTRDSNATTGSIYSSVIAAE
                     RHGEYLGRTVQVIPHITDEIQRRIRRLAGDDVDVLITEVGGTVGDIEILPFLEAIRQF
                     RLDVGPTNVCYVHVTLVPFIGPSGEHKTKPTQHSVTELRSAGIQPDAIVCRSDEPISD
                     DLERKISRLSNVPFSGVVNCPDAGSLYEIPLVVHDEGLDQFVCDALHLITDPPDLTEW
                     RALNERVGRATKPVRVGLIGKYVSLVDAYLSVVESLKHAGIHHGADVEIDWIQAEDVE
                     GLLGENRLRDLDGIVIPGGFGERGVEGKIAAAGFARENDVPCLGLCLGLQCMTIEYAR
                     NVLGLERAHSSEFDPASPHPVIDLMESQRDVADMGGTMRLGAYVAQLQPGSRVAEIYG
                     TDVVSERHRHRYEFNPRYRARFEGSGFVCSGESPDGRLVEFIELESHPFWIATQAHPE
                     FKSRPDRPAPLFREFIAASLERAHGRNPQLLDLSDGSDDNAGADVVG"
     gene            3964..4572
                     /locus_tag="QGG16_07910"
     CDS             3964..4572
                     /locus_tag="QGG16_07910"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012514.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HJP25236.1"
                     /translation="MTMQEQTSSAEVPASASVPTIVSGHGFTRTGEEVLHVGHVITLA
                     RATFEGPAGEVMERDVVHHPGAVAVVALDGDEVVLVRQYRPVLEREMLELPAGKLDVP
                     GEDRPTAARRELVEEAGLDAVDLIELGSFHNSIGFSDEATTIYLATELVPATPLAASI
                     EEEYLTVERVGLDEVEGLIGDGTITDAKTILGLLWTLRRLGR"
     gene            4569..5063
                     /locus_tag="QGG16_07915"
     CDS             4569..5063
                     /locus_tag="QGG16_07915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25237.1"
                     /translation="MSRSTHLLRRFLASLWPGGPSGSSETWARGHLLMGEAALWDQMS
                     GADRRHAVAVARRVDNALDHPERAVLAAALLHDVGKVDSGIGTPARVVATIVAMVGGQ
                     RARSGTGRIGRYLRHPAIGSDLLLGAGSEPVTVAWAAEHHLPERQWTVDPVIARVLHA
                     ADDD"
     gene            complement(5101..>5295)
                     /locus_tag="QGG16_07920"
     CDS             complement(5101..>5295)
                     /locus_tag="QGG16_07920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HJP25238.1"
                     /translation="YGDLKAATADAVITLLRPVQDHYRELVADPAETSRLLALGADKA
                     RSVASATLDRVRTNLGLLAR"
BASE COUNT          846 a         1704 c         1848 g          897 t
ORIGIN      
        1 tgttgctcag ggttgtgttg tatcttgccg gcgcttcggc gactgccccc gaggtgatcg
       61 accatgccct caacgaagtc gtggtcgagc ggggtgccgg cggccagacc atccgggtgg
      121 gagtatctct cgacggcgag tcgttcacct cttacgctgc tgacggattg atcgccgcca
      181 cgcccaccgg gtcgacggcc tacgccttct cggcacgtgg accaatcgtg gatccgctgc
      241 atcgggctat ccaactgaca cccgtgtcgc cccacatgct cttcgaccgg accctggttc
      301 tggaaccatc caccgaagtg ggcatggagg tgctgggcag acgggccgcc acctgcacgg
      361 tggacggccg gtcggtggcc gaccttgctg ggggagatcg tgtcatgtgt acggctgccg
      421 acagggtggt ccgtctggtg accttcggcc cccgagacct ccgcggcctg ctggtgaacc
      481 gtttcgggct cgccgaccgt tgagggcgag acccgctgtc acacccgttg gccaggatgc
      541 ctcccgggtg attcgcctcg ccgctggagc ggccttcggg tgccggcctg accgggcccc
      601 gcaactcaaa ggaacgaccg ccgagggcgg gaaacgggac tgagcgatgc ttgccgaact
      661 acggatcacc ggactgggag tgatcgacga ggtcgaggtg gtgttcggtc ctggcctcac
      721 cgcgcttacc ggtgagaccg gtgctggcaa gaccatggtc atgggcgctg tcgagctact
      781 gctgggcgga cgggccgatc cgtcgatcgt gcggcccgga gcgacagagg ccgtcgtaga
      841 gggccggttc atacttggtg acggcgccgg cgaccgggag cacgtactcc ggcgggtagt
      901 gcccgtcgaa ggtcgaagcc gcgcctacgt ggacgggcac ctggagacgg cagcaagcct
      961 cgccgaggtg gccggccgcc tcgtcgacct ccacggacaa cacgcccatc aacgtctgct
     1021 gggtgccgca gcgcagcggg aagcgctgga ccggttcggt gcgatcgacc tgacgccgct
     1081 ggccgacacc cgtcgacggc tggctgagat cgacgccgag ttggcctcct ttggcgggga
     1141 cgatcgggcc cgagcccgtg agatcgacct tctccgcttc caggtggccg agctggacgc
     1201 cgccgggctg gccgacccga cagaggacga ccgtctggcc gctgaggaac tcctgttggg
     1261 agacgccgtg gcccaccgtg aggccgccgc agcagcgctc gaactattgg acggcgacgg
     1321 cccggcgtcc gatgcggtgg gtcgtgcgtt agccgcgttg gatgggcgat cgccgtttgc
     1381 cccagcgatg ggtcgcctgg ccggcttggc cgcggagctg ggggacgtgg cttcggacct
     1441 ccgggggatc gccgagggtc tcgaggaaga tccggcccgt ctggaggtgg tgggggagcg
     1501 acggcgtctg ctggccgagc tgagacgcaa gtatggcgat gatcttgggt cggtgatggc
     1561 ctaccagagc gacgtgtccg atcgcctgaa ggctctagag gaccacgagg cccgagccgc
     1621 gacgctcgat gcggaacgtc tggctgtcga ggctgcctgc gcggaggcag ccgccacggt
     1681 tcggagcgcc cgtcgtcggg ccgctccagg tctggccgac cgggtctgcg agcatctccg
     1741 ggcgctggcc atgccgacgg ccaccgtcga ggtcggagtc gatggcgagg caggcgagga
     1801 ggtcgagttt cgtctcgccc ccaactcggg gtcgtcgatg ctgccgttag tacgggtggc
     1861 ttcgggcggc gagttggccc gcaccatgct ggccgtaggc atggtcctga cagcgtcacc
     1921 accggttcag ctgttcgatg aggtggatgc cggcgtgggg ggcgaggcgg cgcaccggat
     1981 cggggaggcg ctggccgcgc tggccactga tcgacaggtc ctcgtggtga cccacctggc
     2041 tcaggttgcg gcctacgccg accatcagat gctggtggcc aagttcgacg atggtcacag
     2101 cacagcggcc tcggtcaggc cgctggatgc cgacgaacgg gtagtggagc tttcccggat
     2161 gctctcgggt tctccggaca gcgagaccgc ccggggccac gccaccgagc tccttcatgc
     2221 cgcacgcggt ctgtgacggg tctaggggga acaggcgtga cgggagaccc cggaccccac
     2281 ggcgcgctcc gcgcgctcgc ggctggtcgg ggataggttg aactcccgtg acgaaacaca
     2341 tcttcgtgac gggaggggtg gcgagttcgc tcggtaaggg cctgactgcc gcctccctcg
     2401 gacgccttct caagcaacgc ggtcttcggg ttgtcatcca gaagctcgat ccatacatca
     2461 acgtggatcc gggaacgatg aacccctttg aacatgggga ggtcttcgtc accgatgacg
     2521 gtggtgagac cgacctggac ctcggtcact acgaacggtt catcgacgag aacctgaccc
     2581 gggactccaa cgcgaccacc gggtcgatct attcctcggt tatcgcagcc gaacgccacg
     2641 gcgagtacct gggccggacc gtccaggtca tcccccacat caccgatgag atccagcgtc
     2701 ggatccgacg gctggccggc gacgacgtcg acgtcctcat tactgaggtc ggcggcacgg
     2761 ttggcgacat cgagatcctt cccttcctcg aggccatccg acagttccgt ctcgatgtgg
     2821 gccctaccaa cgtctgctac gtccacgtga ccctggtgcc gttcattggc ccgtcgggcg
     2881 aacacaagac gaagcccacg cagcactcag tgaccgaact ccgcagcgcc ggcatccaac
     2941 ccgacgccat cgtgtgtcgg agcgacgagc cgatcagcga cgatctggaa cgcaagattt
     3001 ccagactctc caacgtgccg ttcagtggtg tcgtcaactg cccggacgct ggcagcctct
     3061 acgagatccc gttggttgtc cacgacgagg gtctcgacca gtttgtgtgc gacgccctgc
     3121 atctgatcac cgacccgccc gacctgaccg agtggcgagc gcttaacgag cgagtgggcc
     3181 gggccaccaa gccggttcgg gtcggcctca tcggcaagta cgtgagcctg gtcgatgcct
     3241 atctgtcggt tgtcgagtca ctgaagcacg ccggcattca ccacggtgcc gacgtcgaga
     3301 tcgactggat ccaggccgag gacgtcgaag ggctcctcgg cgagaatcgc ctgcgggacc
     3361 ttgacgggat cgtcatcccc ggcggattcg gtgagcgcgg cgtggagggc aagattgccg
     3421 cagccggctt tgcccgggag aacgacgtgc cctgcctcgg gctgtgcctc gggttgcagt
     3481 gcatgacgat cgagtacgcc cgaaacgtgc tcggtctgga gcgagcacat tccagcgagt
     3541 tcgacccggc atcgccccac ccggtcattg acctgatgga gtcccagcgc gacgtggccg
     3601 acatgggtgg gaccatgcgt ctgggcgcct acgtggccca actccaacca ggttcacggg
     3661 tggccgagat ctacggcacc gacgtggtgt ccgagcgcca ccgtcaccgc tacgagttca
     3721 acccgagata tcgggctcga ttcgagggat cgggcttcgt atgttccgga gaatcccctg
     3781 atgggcgtct ggtcgagttc atcgaactcg agagccaccc cttctggatc gctacccagg
     3841 cgcatcccga gttcaagagt cgccccgatc ggccggcgcc gctgtttcgc gagttcatag
     3901 ctgcctcgct cgagcgggcc catggccgga acccccaact gctcgacctc agcgatggca
     3961 gcgatgacaa tgcaggagca gacgtcgtcg gctgaggttc cggcctccgc ctccgttccg
     4021 accatcgtgt ccggtcatgg cttcacccgc accggcgagg aggtcctcca cgtcgggcac
     4081 gtcatcacgc tggcccgcgc cacattcgaa gggccggcgg gcgaggtcat ggagcgtgac
     4141 gtagtccacc accccggtgc ggtcgccgtg gtggcgctcg atggtgatga agtggtactg
     4201 gttcgccagt accggccggt gctggagcgc gagatgttgg aactgcccgc cggcaagctg
     4261 gacgttcccg gagaggaccg cccgacggcg gcccgtcgcg aactggtcga agaggccggg
     4321 ctggacgctg tggacctgat cgaactgggg tcgtttcaca actccatcgg gttcagcgac
     4381 gaggcgacga cgatctatct ggccaccgaa ctggtgccgg ccacgccgct ggccgccagc
     4441 atcgaggagg agtacctcac cgtcgaacgg gtcggacttg acgaggtaga gggcctcatc
     4501 ggggatggca ccatcacaga cgccaagacg atcctcggtc tgctgtggac actgcgtcgt
     4561 ctgggccgtt gagccggtcg acgcacctcc ttcgccgttt tctcgcctcc ctgtggccgg
     4621 gcggcccgtc agggtcgtcg gagacatggg cccggggtca tctcctgatg ggcgaggcgg
     4681 ctctctggga tcagatgtcg ggcgccgacc ggaggcacgc cgtggcggtg gcccgacggg
     4741 tggataatgc gctcgaccat ccggaacggg cggtcctggc ggccgccctg ctgcacgacg
     4801 taggcaaagt cgacagtgga ataggcacgc cagcccgggt ggtggccacc atcgtggcca
     4861 tggtcggcgg ccaacgtgct cgttcgggaa ccggacggat cgggcgctat ctccgacacc
     4921 ccgccatcgg gtcggacttg ctactgggag cagggagcga gccggtcacc gtggcgtggg
     4981 ccgccgagca ccacctgccg gagcggcaat ggacagtgga tccggtgatc gcccgggtat
     5041 tgcacgcagc cgacgacgac tgatcaatgg agcgcctcaa gggcggcccc ggtagttgga
     5101 tcagcgtgcc agcaggccga ggttggttcg cacccggtcc aaagtggccg aggctacgga
     5161 ccgggccttg tccgcaccca gagcgagcag ccggctggtc tcggctgggt cggcgaccag
     5221 ttcccggtag tgatcctgca cgggtcgcag aagggtgatc accgcgtcgg cggtggccgc
     5281 cttcaggtcg ccgta
//
LOCUS       DASCMR010000334         4338 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001634009, whole genome shotgun sequence.
ACCESSION   DASCMR010000334 DASCMR010000000
VERSION     DASCMR010000334.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4338)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4338)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4338
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001634009"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            97..894
                     /locus_tag="QGG16_07925"
     CDS             97..894
                     /locus_tag="QGG16_07925"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: protein motif:HMM:NF024744.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004721 - phosphoprotein phosphatase
                     activity [Evidence IEA];
                     GO_function: GO:0004725 - protein tyrosine phosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein phosphatase"
                     /protein_id="HJP25239.1"
                     /translation="MQEPESRPGMEAIANFRGIGGLATIDGRTTVGGLVWRSGHLGRA
                     TDADVARLEALAIHTVVDLRTPDDIAHDGADLVPAGATEHLVPIPDDAGAGAAIRAMI
                     MRGDEDEMRHVWSDGRAAEIAVRGAAMMVTEPSRVAVFAEVFDVVAEPSNWPLVWHCS
                     AGKDRAGWVSTALLMILGVERDTVVAHYLESNRGADARVAALVSSGFVTPEALELMRP
                     FIEVMEAAVVAQMAAVDEHWGGAEAMFRNGFGFTDDRIADLRGRLLD"
     gene            complement(978..2138)
                     /locus_tag="QGG16_07930"
     CDS             complement(978..2138)
                     /locus_tag="QGG16_07930"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP25240.1"
                     /translation="MDFSLGERTEAFRAEVRAFLDEHLTVDVIERMHASGTFNDKDFN
                     SALAEAGLLAGAVPGYGDRDPIELYVLFNELEKAGAPYDGLAVTMLVAGVIHAVGTDF
                     HHTEVLERLLTGEFNCCLGYSEPDHGSDVAAITTKAVRDGDEWVIDGQKMWTTMAHEA
                     DWVILLTRTNPDVPKHKGLTMFLVPMGLPGIEVQPVPTMASERTNATFYSGVRVGDEW
                     RLGEVNGGWAVMGVALAFERGVMGGTNPAVPLLNHVRNWAAEAPSPDGGTMLDDPLLQ
                     ERLARTAMANQVSQLLTLRAAWIAATGGLPGLEGSMAKLYATERYQQAVGWFQQMAGA
                     EGLLSFGVDGAAADGWIDYDGRHSPVVTIYGGTTEINRNNVAERHLGLPRAR"
     gene            complement(2138..3259)
                     /locus_tag="QGG16_07935"
     CDS             complement(2138..3259)
                     /locus_tag="QGG16_07935"
                     /inference="COORDINATES: protein motif:HMM:NF012656.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HJP25241.1"
                     /translation="MDLNLTEDQESIREVFAAFFDGETGPARARSAEPFGFDAAAWER
                     LLETGAPGMGVAEAVGGGGASLADLAVVATEAGSRIAPLPLVDHIVSTRLLARLTDPS
                     ACNDDVLAGSAIVGLALRPATKGVARTVPNGAVAHRVVALDGDRLVIDQHTDLLLGAH
                     LANHGCLPLAHRDLADAETLVEGPEAVAAHARAVDEWRTLTAATLVGIAREALVLGVS
                     YVKEREQFGRPVGSFQAVQHLLADLPGLIDGAHLLTAKAAWAGDRATAGITGTLDVDA
                     NDVTDFPVLAAMSLVAAGEAAVLATDRSLHVHGGYGFSEEYDIQLYYRRARALTWLLD
                     DPARECRRLAGMFLAAADGRLAASTHHDSPQANPETGRS"
     gene            3364..4194
                     /locus_tag="QGG16_07940"
     CDS             3364..4194
                     /locus_tag="QGG16_07940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HJP25242.1"
                     /translation="MAEQQERIESQEHTGAEGLDVERAGGVVTVTLNRPEVMNAMTGT
                     MFAEFGRIFRDLHADETVRCIVLTGAGGNFCSGADVGGQSKRAAGAVSTNPLRNLRQI
                     KASAMALHDCQHPVVAKVHGVAAGAGLNMALGCDLVYAADTARFSEIFARRGLTIDFG
                     GSWVLPRRVGLHRAKELALLAEVIDAAEADRIGLVNRILSEADLDAHVDDVVARIAAG
                     PPLALSMSKALLNQGSQTSMSQALEAEAATQATNFGTEDTREAARAWMEKRSPDFQGR
                     "
BASE COUNT          692 a         1401 c         1532 g          713 t
ORIGIN      
        1 cgaccagaag gtcggacatg tcgccgatgt taggggcacc ggtggtggag attactcgat
       61 tgtcggacag ccacggagcg gtggcacgat gtcccgatgc aggaacctga gtcccgtcca
      121 ggcatggagg ccatcgccaa cttccggggg atcggcgggc tggcaaccat cgacggtcgc
      181 accacggtgg gcggactggt atggcggtcc ggacatctag ggcgggccac cgacgccgac
      241 gtggcccgcc tagaggcgtt ggctatccac actgtggtcg acctacggac tccggacgac
      301 atcgctcacg acggggccga cctcgtgccg gccggtgcga cggaacatct tgtgcccatc
      361 ccggatgacg ccggagcggg tgcggccatc agggccatga tcatgcgagg cgacgaggac
      421 gagatgcgac acgtgtggtc cgacggccgg gcggcggaaa tcgccgtgcg tggggcggcc
      481 atgatggtca ccgaacctag tcgggtggcg gtgttcgccg aagtgttcga cgtcgtggca
      541 gaaccgtcga actggccgtt ggtgtggcac tgctcggcgg gcaaggaccg ggcaggctgg
      601 gtcagcaccg cgctgctgat gatcctcggg gtggaacgcg acacggtggt tgcccactat
      661 ctggagagca accgtggcgc cgatgcccgg gtggccgcct tggtcagcag tggattcgtg
      721 accccggaag ccctcgagtt gatgcgaccg ttcatagagg tcatggaggc tgccgttgtc
      781 gcccagatgg ctgccgtgga cgagcactgg ggtggcgccg aggcgatgtt ccgtaacggc
      841 ttcggcttca ccgacgaccg gatcgccgac ctacggggcc gactcctgga ctgaggtggt
      901 ttaccagcgg acggcgacgg gtcgttaacc gagccggacc cggcccgggt ggttcgttgg
      961 gcgggccgga acgggcttca gcgggcccgg ggaagcccca ggtgtcgttc ggccacgttg
     1021 ttgcggttga tctcggtggt cccgccgtag atggtcacta caggcgagtg tcgaccgtcg
     1081 tagtcgatcc agccatcggc cgccgcgccg tctacgccga atgagaggag gccctcggcg
     1141 ccggccatct gctggaacca acccacggcc tgttggtagc gttccgtggc gtacagcttg
     1201 gccatcgaac cctcaaggcc cggtagacca ccggtcgcgg cgatccaggc ggcccgcagg
     1261 gtcagcagtt gggagacttg gttggccatg gcggtgcgtg ccagacgttc ctggagcaac
     1321 ggatcgtcga gcatggtgcc tccatcgggt gagggcgcct cggcggccca gttccggacg
     1381 tggttcagca ggggcacggc cgggttggtc ccgcccatga cgccccgttc gaaggccagg
     1441 gccacgccca tgaccgccca tccgccgttc acctctccga ggcgccactc gtcgcccacc
     1501 cgcacaccgc tgtagaaggt ggcgttcgtc cgctcgctgg ccatggtcgg cacgggctgg
     1561 acctcgatgc ccggaagacc catgggcacc aggaacatgg tcagaccctt gtgcttgggg
     1621 acatcggggt tggtgcgggt caggaggatc acccagtcgg cctcatgggc catggtggtc
     1681 cacattttct gaccgtcgat cacccactcg tcgccatcgc ggacggcttt cgtggtgatg
     1741 gccgccacat ccgaaccatg gtcgggctcg ctgtagccga ggcagcagtt gaactcaccc
     1801 gtcaggagcc gttcgagtac ctccgtgtgg tggaaatcgg ttcccacggc gtggatgacg
     1861 ccggccacca acatggtgac ggccagcccg tcgtagggcg ctcccgcctt ctcgagttcg
     1921 ttgaacaaca cgtacagctc gatcgggtcg cggtcgccat agcctggcac cgcaccggcc
     1981 aacagcccgg cctcggctag ggcactgttg aagtccttgt cgttgaacgt gccgctggcg
     2041 tgcatccgct cgatcacgtc gaccgtcagg tgctcgtcga ggaaggcccg cacctcggcc
     2101 cggaaggcct cggtccgctc gcccagggag aagtccatca ggacctgcct gtttccggat
     2161 tcgcctgcgg cgaatcgtgg tgggtcgacg ctgctagccg gccgtcagca gcggcgagga
     2221 acatcccggc gagccgtcga cattcgcggg ccggatcgtc cagcagccag gtcagggccc
     2281 tggcccggcg gtagtacagc tggatgtcgt actcctcact gaatccgtag ccgccatgca
     2341 cgtggaggct gcggtcggtg gccagcacag cagcctcgcc ggcagccacc agcgacatag
     2401 cggccagtac cgggaagtcg gttacatcgt tggcgtctac gtccagggtc ccggtgatgc
     2461 cggccgtcgc ccggtcgccg gcccacgccg ctttggcggt caaaaggtgg gcgccgtcga
     2521 tcaggcccgg gaggtcagcc agcaggtgct ggacagcctg gaagctgccc accggccgac
     2581 cgaactgttc gcgctccttg acgtagctga cgccgaggac gagcgcctct cgggcgatgc
     2641 cgaccagcgt ggccgcagtg agggtgcgcc actcgtcgac ggcccgtgcg tgggcggcaa
     2701 cggcctcggg gccctcgacc agggtctcgg cgtcggccag gtcacggtgg gccagcggga
     2761 ggcagccgtg gttcgccaga tgggcaccga ggagcaggtc ggtgtgctgg tcgatcacca
     2821 atcggtcacc gtcgagggcc accacccgat gggctacggc gccgttagga acggttcggg
     2881 ctacaccttt ggtcgccggt cgtaaggcca acccgacgat ggcggatccg gccagcacat
     2941 cgtcgttgca ggccgatgga tcagtcaacc tggccaggag gcgggtgctc actatgtgat
     3001 cgaccagggg gaggggggcg atgcggctcc cggcctcggt agccaccacg gctaggtcgg
     3061 ccagcgatgc cccaccgcca ccgacggcct ccgcgacgcc catgcccggg gcgccggtct
     3121 cgagcaggcg ttcccaggcg gcggcgtcga agccgaacgg ttcggcagag cgggcgcgtg
     3181 ctggcccggt ctcaccgtcg aagaacgccg cgaacacctc gcgaatcgat tcctgatcct
     3241 ccgtcagatt caggtccacg ggctgaccct accgagggag caccgggccg cccgctccgg
     3301 cctttcgtga cgtcggactc gccggacggg tcgccatggc gggttccggt ctagcgtcga
     3361 cccatggccg aacagcagga acgtatcgag tcgcaggaac acacgggtgc cgaggggctg
     3421 gatgtcgagc gggccggagg cgtggtcacc gtcacgttga accgccccga ggtcatgaac
     3481 gccatgaccg ggacgatgtt tgccgagttc gggcggatct tccgcgacct ccacgccgat
     3541 gagaccgtgc gttgcatcgt gctcaccggg gccggcggga acttctgctc gggcgccgac
     3601 gtaggcggcc agtccaagcg ggcagccgga gcagtgtcca ccaacccgct gcgaaacctc
     3661 cgccagatca aggcctcagc tatggccctg cacgactgcc agcatccggt agtggccaag
     3721 gtccacgggg tggcagccgg agccggtttg aacatggccc tagggtgtga tctcgtctat
     3781 gccgctgaca ccgcccgatt ctcggagatc ttcgctcgcc ggggcctgac catcgatttc
     3841 ggtggctcgt gggtgcttcc ccggcgggtc ggcctccacc gggccaagga gttggctctg
     3901 ctggccgagg tgatcgatgc cgcggaggct gaccgcatcg ggttggtgaa ccggatcctg
     3961 tccgaagccg atctggacgc ccacgtggat gacgtggtgg ctcgcatcgc cgccgggccg
     4021 ccactggccc tgtcgatgag caaggcgtta ctcaatcagg ggtcccagac gtcgatgtcc
     4081 caggcattag aggccgaggc ggccacccag gccaccaact tcggtaccga ggacacccgt
     4141 gaggcggctc gggcttggat ggagaagcgg tcgcctgact tccagggtcg atgactgcgc
     4201 cggtctggac cgcgaacctc tgaagacacc accggcgaaa caggtcacgg accggagggg
     4261 agcacgatct gggtctgggt ggtgatggcc gctgtcttcc cgtcgtcgcg gatcacctcg
     4321 gtctggacca cgatggtg
//
LOCUS       DASCMR010000335         2885 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001640960, whole genome shotgun sequence.
ACCESSION   DASCMR010000335 DASCMR010000000
VERSION     DASCMR010000335.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2885)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2885)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2885
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001640960"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..644
                     /locus_tag="QGG16_07945"
     CDS             <1..644
                     /locus_tag="QGG16_07945"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HJP25243.1"
                     /translation="VSDDAAAMARDSLGGDYEVLFNGVEVRRSREVAPWPTEGPTVFF
                     IGRHEPRKGLAVLLDAMAGLGADVRLWVAGDGPDTDELRARVAGDARVQWLGRISDEE
                     RTARIRGAAVCCAPSLRGASFGVVLLEGMACETPVVASDIPGYAKVARGGDDALLVPA
                     GDAEALGAAIAKVLAEPALATRLVVSGRERAEEFSMHRLADKYLEAYSSVAGA"
     gene            748..1485
                     /locus_tag="QGG16_07950"
     CDS             748..1485
                     /locus_tag="QGG16_07950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25244.1"
                     /translation="MSLLRHPILVPALLVSLCLMVVVALIGLPLPVAAVIGVLVGTGI
                     TVMVTRRAEGMLRRTIGARTAHAGEFPRLHNTVDGLCLTHGIDRPDVFVLDSPAGNAL
                     AMAGREGASIVLTTGAADRLTLVELEALVAHLLARCAADELRGETTTVALGRFSFVGR
                     GMGGFGRSTADGPDRMVQTDFDGADLTRFPPGMQEALRGLSDLGAAVDAPASTARLWL
                     LQPDGRTDVATADHPAVDVRIAALAER"
     gene            1485..2711
                     /locus_tag="QGG16_07955"
     CDS             1485..2711
                     /locus_tag="QGG16_07955"
                     /inference="COORDINATES: protein motif:HMM:NF022702.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3048 domain-containing protein"
                     /protein_id="HJP25245.1"
                     /translation="MLLRGVATPRPGVVTMRLGSPLLRVGLLLGLLGAAGCGFGGEAN
                     APAPTLGTIGSTAVAPDDTSATAPDTATDGAAAEEESGGDAMPTTTTGMPTTTIITGW
                     TGATHPLTGLPAVDGVADRPALAVKIGNNDTKSLPQIGIQSADVVYETHIENGVTRFL
                     AIFQSEVPLTVGLVRSARSSDIDLIGNLNRPVFAYWGSNQGVGDEVAEAERQGTFVPV
                     STNGEGQAFFFRDEARGEAPYNGFLDAAALVASAPGGAPDALFDFGPLPSSAVTTKGI
                     GWRTPRREIDWVWDHATARWLRFHRGVPLLDETGVQLAADNVLVLYVDYRTSDADLES
                     PQSITTGSGDGWLLRDGTITGVTWSRPFIADRWSLADDDTGDRVNLRTGRTWVALARL
                     GEGILLDPERIAELVG"
     gene            2771..>2885
                     /locus_tag="QGG16_07960"
     CDS             2771..>2885
                     /locus_tag="QGG16_07960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase lyase subunit
                     PdxS"
                     /protein_id="HJP25246.1"
                     /translation="MSDVTRSTGTQLVKRGLAEMLKGGVIMDVVDPAQAKIA"
BASE COUNT          436 a          993 c          976 g          480 t
ORIGIN      
        1 ccgtgtctga tgatgcggcc gccatggctc gggactcact gggcggggat tacgaggtcc
       61 tgttcaacgg ggtggaggtc cgtcggagcc gggaggtcgc tccgtggccc accgaaggcc
      121 ctaccgtctt cttcatcgga cgtcacgagc cccgcaaggg cttggcggta ctgctggacg
      181 ccatggccgg tctaggcgcc gacgttcgcc tctgggtggc cggcgacggt cccgataccg
      241 acgagctccg agcccgggtg gccggcgacg cccgggtcca gtggctgggc cgaatctccg
      301 acgaagagcg aacggcgagg atccgcggcg cggccgtctg ctgcgcgccg tcgctgcgtg
      361 gcgcatcgtt cggcgtggtg ctgctcgagg ggatggcatg tgagaccccg gtggtagcca
      421 gcgacatccc gggctacgcc aaggtggcgc gtggtggtga cgatgcgctg ctagtccccg
      481 caggcgatgc cgaggcgctc ggcgcggcca tcgccaaggt cctcgcggaa ccggccctcg
      541 ccacccggtt ggtggtcagc gggcgggagc gagcagagga attctcgatg catcggctgg
      601 ccgacaagta cctagaggcc tattcctcgg tggccggcgc gtaacatgcg ggtcggccat
      661 ctggtccgtg ttgaccttcg ctagtccggc catcagttcc tgaacaacat gtcccgcccc
      721 cgaaccaatc gaagccaccg ttcgcccatg tcgctgctac gccacccgat cctcgtgccc
      781 gccctgctcg tcagcctctg cctgatggtc gtggtcgccc tgatcggcct cccgctgccc
      841 gtcgccgccg tgatcggcgt cctcgttggg acaggcatca cggtgatggt gactcgacgg
      901 gccgagggca tgctccgacg caccatcggt gcccggacgg cccatgccgg tgagttcccc
      961 cgactgcaca acaccgttga cggtctctgt ctgacccacg ggatcgaccg cccggacgtc
     1021 ttcgtcctgg attcgccggc aggaaatgca ctggccatgg ccgggaggga aggtgcatcg
     1081 atcgtcctga ccaccggtgc agccgatcgc ctcaccctcg tcgaactcga agccctggtc
     1141 gcccacctgc tggcgcggtg tgccgctgac gaacttcgtg gtgagaccac gacagtcgca
     1201 ctcggccggt tctccttcgt gggccggggt atgggcgggt tcggacgctc gacggccgac
     1261 ggccccgacc gcatggtcca aacggacttc gatggcgccg acctgacccg tttcccgccg
     1321 ggcatgcaag aggcgctccg agggctgtcc gacctcggtg cggcggtcga tgcgccggcg
     1381 tcgacggccc ggttgtggct gctgcaaccc gacggccgga ccgacgtggc caccgcggac
     1441 catccggcgg tcgacgtgcg aatcgccgcg ttggctgagc ggtgatgctc ctacgaggcg
     1501 tcgccacgcc gcgacccggc gtggtcacga tgcggttggg atcgcctctc ctccgggtcg
     1561 gcctgctact tggactgctg ggcgccgccg gttgcggatt cgggggtgaa gcgaacgccc
     1621 cggcgcccac gctgggcacc atcgggtcca ctgctgtcgc ccccgatgac acgtccgcta
     1681 ccgcccccga tacggccacc gatggtgccg ctgccgagga ggagtcgggt ggcgatgcca
     1741 tgccgaccac cacgaccgga atgccgacca ccacgatcat cacgggttgg accggtgcga
     1801 cccatccgct caccggcctg ccagccgtcg acggggtggc cgaccgcccg gcgttggccg
     1861 tcaagatcgg caacaacgac accaagtcgt tgccgcagat aggcatccag tccgccgacg
     1921 tggtctacga aacgcacatc gagaacgggg tgacgcgctt cctggccatc ttccagagcg
     1981 aggtcccgct caccgtggga ctggtccggt cggcccgatc tagcgacatc gacctgatcg
     2041 gcaacctgaa ccgcccagtc ttcgcctact ggggcagcaa ccagggcgta ggcgacgagg
     2101 tcgccgaggc ggaacgtcag ggcacgttcg ttcccgtgag caccaacggt gagggtcagg
     2161 cgtttttctt ccgtgacgag gcccggggcg aagcccccta caacgggttc ctagacgctg
     2221 cggcgctggt ggcttcggcc cctggtggcg cacccgacgc cctgttcgat ttcggccctt
     2281 tgccgtcctc cgcggtgacc accaagggca tcggatggcg aacgccccga cgtgagatcg
     2341 actgggtctg ggatcacgcc accgcccgct ggctgcgatt ccaccgcgga gtgccactgc
     2401 tcgacgagac tggcgtgcag ttggccgccg acaacgtgct cgtcctctac gtggactacc
     2461 ggacgtcaga tgccgatctg gagtcgccgc agtccattac gaccggatcc ggcgacggct
     2521 ggttgctgcg ggacggcacc atcaccggcg tgacgtggag tcgaccgttt atcgccgacc
     2581 ggtggtccct ggccgacgat gacaccggcg accgggtgaa tctgcgaaca ggtcgcacct
     2641 gggtggcgct ggcccgactg ggcgagggca tcctgctgga tccggagcgc attgccgaac
     2701 ttgtcggctg accgctccga aaacgattcc gatacccgct cgtcgaccca cccttcctag
     2761 actccgcgtc atgagtgacg tgacccggtc gaccggaacc cagttggtaa agcgcggact
     2821 agccgagatg ctcaagggcg gcgtgatcat ggacgtggtc gaccccgccc aggccaagat
     2881 cgccg
//
LOCUS       DASCMR010000336         6945 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001641966, whole genome shotgun sequence.
ACCESSION   DASCMR010000336 DASCMR010000000
VERSION     DASCMR010000336.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 6945)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6945)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6945
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001641966"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..664)
                     /locus_tag="QGG16_07965"
     CDS             complement(<1..664)
                     /locus_tag="QGG16_07965"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase"
                     /protein_id="HJP25247.1"
                     /translation="MSTSQSTWTSRTWRDRTALQQPQWPDGDAHEAVLEQLSSLPPLV
                     FAGETRELTSRLADVAAGRAFLLQAGDCAESFDTSADSIRDRLRVILQMAVVLTYYTG
                     VPVVKVGRIAGQFAKPRSSDTETIDGIELPSFRGHIVNDVGFTAEERAADPERLLTAY
                     HRAAATLNLLRAFTKGGFADLSRVHQWNREFVAASPAGQRYAAIAEEIERAVQFMSAC
                     GIN"
     gene            complement(779..1609)
                     /locus_tag="QGG16_07970"
     CDS             complement(779..1609)
                     /locus_tag="QGG16_07970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HJP25248.1"
                     /translation="MSDSVGQYLNEIGMVPLLNAQEERELSQIIEAGAAARARKEAGE
                     TGREIERPIRAAARAKDRFIRSNLRLVVSVARRYPLPPGMELLDLIQEGNLGLEHAVD
                     KFDWRKGFKFSTYATFWIRQAIGRALDQKASLVRLPGDRSASLRAALRAVSGNGDELD
                     EEHARLHRLTTPTSLDRTIGDDDSNELVDLLPDSTPGPELQVMAMAENDMATSLLDVL
                     DNRARYAVEQRFGLTDGRKRSYREVGEDLGVTAEAARRLVKRAVTTVRDRASEYSDVA
                     "
     gene            1908..2522
                     /gene="nadD"
                     /locus_tag="QGG16_07975"
     CDS             1908..2522
                     /gene="nadD"
                     /locus_tag="QGG16_07975"
                     /inference="COORDINATES: protein motif:HMM:TIGR00482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000309 - nicotinamide-nucleotide
                     adenylyltransferase activity [Evidence IEA];
                     GO_function: GO:0004515 - nicotinate-nucleotide
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate (nicotinamide) nucleotide
                     adenylyltransferase"
                     /protein_id="HJP25249.1"
                     /translation="MNGAQLPPGPRRIGLFGGTFDPPHLGHLEAAQTAMVDLGLDVVV
                     LVVANDPWQKTACGQDVTPAGIRLAMVRAAAEGLEGVEVDDLEIRRGGPSYTADTVDA
                     YAETGSKDQLFVLVGSDIAPGLDRWARPDEVRRRATIVVMDRPGHIGHRPPAGWDHVV
                     LAGTFPDLAGTDVRALLQDGASAVGAVPEAVLELISEHGLYGAH"
     gene            2591..3724
                     /locus_tag="QGG16_07980"
     CDS             2591..3724
                     /locus_tag="QGG16_07980"
                     /inference="COORDINATES: protein motif:HMM:NF024791.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LytR C-terminal domain-containing protein"
                     /protein_id="HJP25250.1"
                     /translation="MAAALAIWGAVLLMGGLTTVLDSRRGETREAVTDPSAAGFEAFV
                     EQTWSMLVATEDGSGDLVQVAVVAAADRSGGGGSVLLLPVETRLPGDGTASECEAACR
                     LLDQHRDGGLEAVRIAMASILDVQVTGATLLTPARWESLAGAVAPVAVTLAEDLVATA
                     ADGTSVVRFPAGTVSVAATDVVDLFGFPGAGDDSSTQRDVAERATRQQDWWRGWMDAL
                     HGGDPRDRLPKLDLDVIDLLATVARGRVRIVSAPWVDDGAAVVVDGSQLTDVVVEMFP
                     FPIPRVPGLRPSVRLLNGTGDPSVDGPAREAVLRAGVELAVVGNYRNDGAIQTRVIYR
                     DPALEAAAEALAAAIGGGVLFDQYLSPVTDLTVVIGADFLLRG"
     gene            3737..4138
                     /gene="rsfS"
                     /locus_tag="QGG16_07985"
     CDS             3737..4138
                     /gene="rsfS"
                     /locus_tag="QGG16_07985"
                     /inference="COORDINATES: protein motif:HMM:TIGR00090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HJP25251.1"
                     /translation="MSGQSTTTPEAFPIPSVNEWIDWARAAARAADDKLGGETIIIEV
                     GDVISVTDYFVVTSGGNSRQVRAIADEVEEQLTMLDGPKPVGVEGRDDYRWVLMDFGG
                     FVVHVLDEESRSFYDLERLWNDCPKVGWDPS"
     gene            complement(4174..4980)
                     /locus_tag="QGG16_07990"
     CDS             complement(4174..4980)
                     /locus_tag="QGG16_07990"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJP25252.1"
                     /translation="MTSPTGPGAPLDIRWSDVSVDLGGRQVVDNLDLLVEGGSWTTII
                     GPNGAGKTTLLRALAGTVPHRGTITIGPDDGVGLGRRERARRLAVVPQHPVIPPGLDV
                     FDYALLGRSPHQGVRFATSEDDRRRTSAVLERLGLNDFAHRFVDSLSGGERQRVVVAR
                     ALVQDAPVLVLDEPTSFLDLGHQMGVLELIAELRAERSLTVVCALHDLTVVGQFADRI
                     AVLDDGHLAEHGTPGEVLTPSVISRYWGVDVRTEIHDDASVSVSVRRRGR"
     gene            complement(4977..6044)
                     /locus_tag="QGG16_07995"
     CDS             complement(4977..6044)
                     /locus_tag="QGG16_07995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HJP25253.1"
                     /translation="MTKSMSASQIPKRSDSRLGAAWLLAGVGAVLVAGVVGVATGPVS
                     IPLGKVVRELLDRLPLIAVDSSLSATEQAIVWDIRAPRVVLGLLVGALLAGSGAAYQG
                     VFRNPLADPYLLGIAAGAGLGATIAIVTELRDVFGFIDPVPFAAFAGALVAVTAAGTL
                     SVRRGRIGSPATLILAGVAVANFFTAIQTFVQQQNSATLQQVFAWILGRLSTAGWGEV
                     RLLLPYAVLCSMGMLLSVGALDILAVGDEEASTLGLNPRATRRVVLVVASLAAAAAVA
                     VSGLIGFVGLVVPHVVRMVAGASHRRVLPLSLLFGGAFLALADVAARTVQAPAELPIG
                     VITAFIGAPFFLLILRRQLTS"
     gene            complement(6052..>6945)
                     /locus_tag="QGG16_08000"
     CDS             complement(6052..>6945)
                     /locus_tag="QGG16_08000"
                     /inference="COORDINATES: protein motif:HMM:NF013648.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJP25254.1"
                     /translation="LRLPVAALVAMLMASACGGVGSSIAMSGSPGVDHDSAEHDGPKR
                     IVSISTVATEMLFAIGAGHRVVAVDSMSNFPSDAPVTDLSGFEPNVEAILGFAPDLVV
                     LSYDPGDVVAGLDAVGVATLLLGAAQTIADTYSQIEALAAATGDEDAAATLVAEMKAE
                     MAALTDSVQSLEQPLSYYHELDNTLYTVTSTTFIGEVYALAGLVNVADPADPDGSAWG
                     YPQVSAEYLLNADPDIIFLADTKCCAQDVAAVAARPGWANLTAVSRGRVVELDDDVAS
                     RWGPRIVEFLRSIVEAVNAID"
BASE COUNT         1168 a         2138 c         2468 g         1171 t
ORIGIN      
        1 tgttgatccc gcaagctgac atgaactgca cggccctttc gatctcctcg gcgatggcgg
       61 cgtagcgctg cccggccggg cttgcggcca cgaactcacg gttccactgg tggacccgtg
      121 acaggtcggc gaaccccccc ttggtgaagg cccgcaggag gttcagggtg gcggccgctc
      181 ggtggtaggc ggtgagtagg cgctcgggat cagctgcgcg ttcctcggcg gtgaacccga
      241 catcgttgac gatgtgccca cgaaacgacg gcagttctat gccgtcgatg gtctcggtgt
      301 cactcgatcg gggcttggcg aactggccgg cgatccgacc gaccttcacc accggaacgc
      361 cggtgtaata cgtgagcacg acggccatct ggaggatgac ccgaagccgg tcccggatgg
      421 agtcggcgga ggtgtcgaag gactcggcgc agtcgccggc ttggagcagg aaggcccgcc
      481 cggcagccac gtcagccagt cggctggtca gttcccgggt ctcgccggcg aacaccagtg
      541 gcggaagtga cgagagctgt tcgaggaccg cttcatgggc gtcgccgtct ggccactggg
      601 gctgctggag ggcggtacgg tcccgccacg tgcgggaggt ccaggtggac tgggaggtgc
      661 tcacggtgga tcagcctagg ggtgacggtt cgcggcaccg cagaggtttg cgtgggttcg
      721 cctatcgacg accgtctgag gaaccgttca gcgatcggat cggtccgacc gccggggttc
      781 aggcgacgtc gctgtactcg ctggcccggt cgcgcaccgt ggtcacggca cgcttcacca
      841 gacggcgggc ggcttcggcg gtaacgccca gatcttcacc gacctcgcgg tagctccgct
      901 tacggccatc ggtgaggccg aagcgctgct cgacggcgta gcgggcccgg ttgtctagaa
      961 cgtccaggag gctggtggcc atgtcgttct cggccatagc catcacctgg agctcgggac
     1021 ccggggtgga gtcagggagc aggtcaacca gctcgttgct gtcatcgtca ccaatggtgc
     1081 ggtccagcga ggtgggggtg gtcagacggt gcaggcgtgc gtgctcctcg tcgagctcat
     1141 cgccattacc cgatacggcc cgcagggcgg cccgcaggct ggccgagcgg tcgccgggaa
     1201 gacgcaccag gctggccttc tggtccagcg cccggccgat ggcctgacgg atccagaagg
     1261 tggcgtaggt ggagaacttg aagccctttc gccagtcgaa cttgtcgacg gcgtgctcca
     1321 ggccgaggtt gccctcctgg atgaggtcga gcaactccat gccgggaggc aaggggtagc
     1381 ggcgggccac actcaccacg aggcggaggt tggatcggat aaaccgatcc ttagcgcggg
     1441 cggcggcccg gatggggcgc tcgatctcgc gaccggtctc accggcctcc ttgcgggcac
     1501 gggctgcagc accggcctcg atgatctggg acagctcccg ctcttcctgg gcgttcagga
     1561 gcgggaccat gccgatctcg ttcaggtact gaccaacgga gtcactcata tgcttctcac
     1621 tcgcttgtct tggcctcgga cagtcgcatg acgcgcgcca aggaggggat gatttcaggg
     1681 gggagacggg tttccggggc gattggtgga tgtttccggt gatctcgtct gtagatattc
     1741 aaccacatcg ggcgggtgct gtatagccct gtcatggtga cctccgtcat acgaagattg
     1801 cataatccgc cccggggtcc gaaaatcctg cgtcttcgca ggtcaggggc gatgtacgga
     1861 gctgtcgtca cagcggcgag ccgctggcct accggtagca tcgggccgtg aacggcgccc
     1921 aacttccgcc tggaccgcgc cggatcggac tctttggcgg gacgttcgac cctccccatt
     1981 taggccacct agaggctgct cagaccgcga tggtcgatct ggggctcgac gtagtggttt
     2041 tggtcgtcgc caacgacccg tggcagaaga cggcctgcgg tcaggacgtg accccggcgg
     2101 ggatccgcct ggccatggtc cgcgctgcgg cagaggggct cgaaggggtg gaggtggacg
     2161 acttggagat ccggcggggc ggcccgtcct acacggccga cactgtggac gcctacgccg
     2221 agacaggctc caaggaccag ttgttcgtac tcgtgggaag tgacatcgcc ccggggcttg
     2281 accggtgggc gcgacctgat gaggtgcgtc ggcgtgcgac gattgttgtg atggatcgac
     2341 ccggacacat cgggcaccgt ccgcccgctg gctgggatca cgtggtgctc gcgggcacgt
     2401 tcccggatct ggccgggacg gacgttcggg ccctgcttca agacggcgcg agcgcggttg
     2461 gggcggtccc tgaggcggtc ctcgagttga tttctgaaca cggcttgtac ggggcgcatt
     2521 agtgagcagc gatggtctac gaaacccgaa cccgccgctc cctaacggtt ggaggtgggg
     2581 ctttcccgcg ttggctgccg ctttagccat ctggggggcg gtcctcctga tgggcggatt
     2641 gaccaccgtt ctggacagcc gacggggtga gacccgtgag gccgttaccg atccgtcggc
     2701 cgccgggttc gaggcattcg tggaacagac ctggtcgatg ctggtggcta ccgaggacgg
     2761 gtcgggcgac ttggtacagg tcgccgtggt ggccgccgcc gaccggtcgg gtggcggggg
     2821 ttcggtacta ctgctcccgg tggagacccg gctacccggc gacgggaccg cgtccgaatg
     2881 cgaggcggcc tgtcggctgc tggatcagca ccgtgacggc ggactggagg cggtccggat
     2941 agccatggcg tcgatcctcg acgttcaggt gaccggagcg accctgttga ccccggcccg
     3001 gtgggagagt ctggccggag ccgtagctcc cgtggcggtg accctggcgg aggacctggt
     3061 ggccacggcg gccgatggga catcggtggt ccgatttccg gccgggacgg tttcggtggc
     3121 ggccaccgat gtggtggacc ttttcggttt tcccggtgcc ggggatgact cgtcaacgca
     3181 aagggacgtg gccgagcggg cgactcgcca gcaggactgg tggcggggct ggatggatgc
     3241 cctgcacgga ggagaccccc gtgaccgcct gccgaaactc gacctcgacg tgatcgacct
     3301 gttggccacc gtggcccgtg gccgggtacg catcgtgtcc gcaccgtggg tggatgacgg
     3361 cgctgcggtc gtggtcgatg ggagccagct gaccgatgtg gtagtcgaga tgttcccctt
     3421 cccgattcca agggtgcccg gactccgtcc gtcggtccga ctactgaacg gcactggcga
     3481 tccgtcggtc gatggtccgg cccgcgaggc ggtgctgcga gccggcgtcg aactggccgt
     3541 ggtgggcaac taccgcaatg acggggcgat ccagacccgg gtcatctacc gtgacccggc
     3601 actggaggcg gccgccgagg cgttggccgc tgcgataggt ggcggcgtgc tgttcgacca
     3661 gtacctcagt ccggtgactg acctaacggt ggtcatcggc gccgatttcc ttctccgggg
     3721 ttagcgttca gccgctatga gcggtcagag caccaccact cctgaagcgt tcccgatccc
     3781 ctcggtcaac gagtggattg actgggcccg cgctgcggca cgtgccgcgg atgacaaatt
     3841 gggtggtgag acaatcatca tcgaggtggg cgacgtcatc tcggtgaccg actacttcgt
     3901 ggttaccagc ggcggcaact cccgtcaggt ccgtgccatc gccgatgagg tcgaggaaca
     3961 actgaccatg cttgacggac cgaagcctgt tggggtcgag ggccgagatg actaccgctg
     4021 ggtcctcatg gacttcggcg gctttgttgt ccatgtgttg gacgaggagt cacggtcctt
     4081 ctatgacctc gagcgcctct ggaacgactg cccaaaggtt ggctgggatc cgtcctgacc
     4141 taaattcgtc gtacctgaag cacagtgccc cggctatcgc ccgcgccggc ggacggagac
     4201 gctgactgag gcgtcgtcgt ggatctcggt ccgtacgtcg actccccagt agcgcgatat
     4261 caccgagggc gtcagcacct ctcctggggt gccgtgctcg gcgaggtggc cgtcgtcgag
     4321 cacggcgatg cgatcagcga actgccccac caccgtgagg tcgtggaggg cgcacaccac
     4381 ggtgagggac cgctcggcgc ggagttcggc gatcaactcg aggacaccca tctggtgtcc
     4441 gaggtctaga aatgacgtgg gctcatctag aaccagcacc ggagcgtcct gtacgagtgc
     4501 ccgggccact accacccgct gacgttcgcc accggagagc gaatccacaa accggtgagc
     4561 gaagtcgttc aggcccaggc gttccagtac cgctgaggtt cgccgtcgat catcttccga
     4621 tgtggcgaaa cgcacgccct gatggggaga gcgtcccagc agggcgtagt cgaatacgtc
     4681 gagccccggg ggaatgaccg ggtgttgcgg cacgacggct agtcgtcgcg cccgctcccg
     4741 ccttccaagg ccgacgccgt cgtcgggacc gatggtgatg gtgcctcggt gggggaccgt
     4801 tccagcgagt gcccggagga gggtggtctt cccggcgccg ttcggcccga tgatcgtcgt
     4861 ccacgacccg ccttcgacca ggaggtccag attgtccacg acctggcgtc caccgaggtc
     4921 gaccgagacg tcggaccagc ggatgtcgag tggtgcccca gggccggttg gcgaggtcac
     4981 gacgtcaact gccttcggag gatgaggaga aagaacggcg caccgatgaa ggccgtaatc
     5041 acccctatgg gcaactcggc cggcgcctgg acagttcggg cggccacgtc agccagcgcc
     5101 aggaaagccc caccaaacag cagggagaga ggtagcacgc gtcggtggct ggccccggcc
     5161 accatgcgaa caacatgggg aacgacgagg ccgacgaatc cgatgagacc gctgacggcg
     5221 acagccgctg cggcggccag cgacgccacg actaggacga cacgtcgtgt ggctctcggg
     5281 ttgagcccga gggtggaagc ctcctcgtcg ccaacggcca ggatgtccag ggctccgacc
     5341 gacagcagca tccccattga acaaagcacc gcgtagggga gaagtaggcg tacctccccc
     5401 cacccggccg tcgagagtcg tccgagtatc caggcgaaca cctgctggag agtcgcggag
     5461 ttctgctgct ggacgaaggt ttggatcgcg gtgaagaagt tggccaccgc caccccggcg
     5521 aggatgaggg tggccggcga accgatccga ccccgccgca cactgagcgt cccggctgct
     5581 gtcacagcca ccagggcgcc ggcgaacgcg gcgaacggca ccgggtcgat gaagccgaac
     5641 acgtcccgga gttcggtgac gatcgcgatg gtggctccca gaccggcacc agcggcgatc
     5701 ccgagcaggt aggggtcggc cagcggattt cggaacactc cctgataggc ggcgcccgaa
     5761 ccggccaaaa gggcgccgac gagaagcccg agcaccaccc gaggggcccg gatatcccag
     5821 acgatggcct gttcggtcgc cgacaacgac gagtccactg caatgagtgg caggcggtcg
     5881 aggagttccc tgaccacctt cccgagggga atggagaccg gcccggtggc tacccccacc
     5941 acgccggcca ccaggacggc acctaccccg gcaaggagcc atgcggctcc caggcgggag
     6001 tccgaacgtt tgggtatctg gctagcgctc atcgacttgg tcacgtagca atcagtcgat
     6061 ggcgttgacg gcctcgacga tggagcgcag gaactccacg atccggggcc cccatcgaga
     6121 cgccacgtcg tcgtcgagtt ccacgacccg cccacgggac acggcggtga ggttggccca
     6181 gccggggcgg gcggcgaccg ctgcgacatc ctgtgcgcag cacttcgtgt cggccaggaa
     6241 gatgatgtcc ggatcggcgt tgaggaggta ttcggcagag acttgcgggt agccccaagc
     6301 ggagccgtca ggatcagccg gatcggcgac gtttaccagt ccggcgaggg cgtacacctc
     6361 gccaatgaag gtcgtcgaag tgacggtgta gagggtgttg tccagctcgt ggtagtagct
     6421 cagcggttgc tcgagggact ggacggaatc ggtgagtgcc gccatctcag ctttcatctc
     6481 ggcgaccagg gtggctgcgg catcctcatc gccggttgct gctgcaagtg cctcgatctg
     6541 ggaataggtg tcggcaatgg tctgggctgc ccccaggaga agggtcgcta cgccgacggc
     6601 gtcgaggccg gctacgacgt cgcccgggtc gtaggagagg accactaggt cgggcgcaaa
     6661 gccgagaatg gcctcgacgt tcggctcgaa gccgctgaga tcggtgaccg gtgcgtcgct
     6721 ggggaagttg gacatggagt cgacggccac gacacggtgg ccggcaccga tggcgaacaa
     6781 catttcggta gccaccgtcg aaattgacac gatgcgtttg ggcccgtcgt gctccgctga
     6841 gtcatgatcg acgccgggcg acccggacat ggcgatcgag gagccgacgc caccgcaggc
     6901 ggatgccatc agcatggcca caagtgcggc taccggcagg cgaag
//
LOCUS       DASCMR010000337         4871 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001645797, whole genome shotgun sequence.
ACCESSION   DASCMR010000337 DASCMR010000000
VERSION     DASCMR010000337.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4871)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4871)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4871
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001645797"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..314)
                     /locus_tag="QGG16_08005"
     CDS             complement(<1..314)
                     /locus_tag="QGG16_08005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HJP25255.1"
                     /translation="MATMTRVLPWRRRPREVVGETSALLTEYRAHHPGADSSMIEQAY
                     QVALAAHAGQTRKSGEPYIHHPLSVATIVARQGLDDVTVAAALLHDAVEDTSISLDDL
                     ER"
     gene            complement(510..1628)
                     /gene="secF"
                     /locus_tag="QGG16_08010"
     CDS             complement(510..1628)
                     /gene="secF"
                     /locus_tag="QGG16_08010"
                     /inference="COORDINATES: protein motif:HMM:TIGR00966.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HJP25256.1"
                     /translation="MKTLRALYRGESPVDFPLLWRPAVTTSVVAVVLGLLSFAVFGLN
                     LGLDFEGGTSYEVRAPDVSVADARELMADLGAPEARIQLVDDDLVLVRSDVQDPARAA
                     EIRDGLAAGLGPVVAFEQVGPTWGDEVTGKAVKALIVFFIVVAMYIAVRLEWKMAVGA
                     LVAVAHDIVLSVGVYSVFRFEITPATVIAFLTIMGYSLYDTIVVYDKVREVVGRLGAT
                     ERYTYSELMNLALNRVAMRSINTSITSAIPVLSMLVVGSFILGAGTLREFAVALLVGI
                     AVGSYSSLFLASSLVSVLKEREERWSQIALKVRNRTGDDVDGSMKGTRTIERSDAVGV
                     DTRAAPRRAPGGGPAKRRPTMTAPTGGGVPPRPRKKKR"
     gene            complement(1625..3130)
                     /gene="secD"
                     /locus_tag="QGG16_08015"
     CDS             complement(1625..3130)
                     /gene="secD"
                     /locus_tag="QGG16_08015"
                     /inference="COORDINATES: protein motif:HMM:TIGR01129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HJP25257.1"
                     /translation="MPRRQLVYLLGIVILSVLASTMTVVWGNKPLLGLDLQGGVSVRL
                     VATEPATEEMLDQTVSIIRDRVDGLGVAEPEISRTETGVLVSLPGVDDQDRALSLVGT
                     TAELRFRPVCSVTSTVRPETPASGSWSTAHAMCSEVNTGAVVPAIGADGYTAPEDDLA
                     ENFVVLGLRGDTAGQRYLLGPSVLTGEAIADANPLFIDYQWQVGLDLHQGQVGIDGFN
                     EVAARCYTGDPSCPLAVGSTNGRLAIVLDGQVVTAPSIRAPQFQHDAILISGGFEKAE
                     ADDVSLSLRYGALPVELEPDNTRVVSATIGEDSLRAGVVAGLVGLLLVALFIVTYYRI
                     LGLVALLSLGISGVLLWAIIAHLGTQSGLALTLAGITGMIVAVGVSVDSNIVYFEHLK
                     EDVRDGRTARSSVDRAFPIAFSTIVKADLASLIGAGLLWALTVGAVRGFALYLGLATI
                     LDLVATYFFMGPMVRLLATTRWFADHPERFGLPASGAVSARRGAVPSEVGA"
     gene            complement(3167..3523)
                     /gene="yajC"
                     /locus_tag="QGG16_08020"
     CDS             complement(3167..3523)
                     /gene="yajC"
                     /locus_tag="QGG16_08020"
                     /inference="COORDINATES: protein motif:HMM:TIGR00739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HJP25258.1"
                     /translation="MAGFIPLILIFGLMYVLMIRPQQRKVKEQQALVSSISAGDEVVL
                     SSGIFGVVKEVDGDDEHVLWIEVYSGIELKVLRSAVDRRFNEPTTVDEELVAEEPVTA
                     EPGEETGSEETGSDEA"
     gene            complement(3686..>4871)
                     /gene="tgt"
                     /locus_tag="QGG16_08025"
     CDS             complement(3686..>4871)
                     /gene="tgt"
                     /locus_tag="QGG16_08025"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HJP25259.1"
                     /translation="VPLPLVRGRHAGGPHRDGSTGGDRPVRAEFTESAIDGGARSGTV
                     RVPGGTFRTPCFMPVGTRGAVRHLSSVDLAELGAEVVLGNTYHLMLRPGAEVIRAHGG
                     LGAFAGWEGLTLTDSGGYQIFSLKPKVDDQGATFRSTYDGSTHVLTPEGAAEVQADLG
                     ADIQMVLDVCPALPATEKVLRAAVVRTATWAGRGRRAFLEHPDAAGRQSQFGIVQGGT
                     DTGLRIESAERTLEVGFDGYAVGGLSVGETRDQMLEPLAAVTSLLPADQPRYFMGLGD
                     PAGLVEVVAAGIDMFDCVLPTRHARHGTVLTTAGRLNLRNARFATDDSPLDPAFPASP
                     AGRWSRAYLRHLLMTDEPTGGRLLSMHNLAWLLDFVDRLRASIEAGTFEAFRSDTLTV
                     WG"
BASE COUNT          902 a         1629 c         1596 g          744 t
ORIGIN      
        1 tcccgctcga ggtcatcaag ggagatggag gtgtcctcca ccgcgtcgtg tagcagggcg
       61 gcggccaccg tcacgtcatc cagaccctgc cgggccacga tggtggccac cgacagcgga
      121 tggtgaatgt agggctctcc ggacttgcgg gtctggcctg cgtgggcggc caacgccacc
      181 tggtaggcct gctcgatcat cgacgaatcc gctccgggat gatgggcccg atattcggtc
      241 agcagtgccg acgtctcgcc gaccacctca cgggggcggc gtcgccacgg gagcacccgg
      301 gtcatcgtgg ccatctcagc ggcacccgct ttcgggacac aggtttctga gacgaaggct
      361 tccgctatac gggctcctgg aaaggcccgg ttccctggaa cgacctgaga tcaccagcgt
      421 tcccatgcct ccacggtagt cgtggggggc caccggccag tgggccccga agccggaccc
      481 ttcggtcagg tctcgctgga cgacgtgcgt cagcgcttct tcttgcgtgg gcggggcggc
      541 acgccaccgc ctgtcggcgc cgtcatggtc ggacgacgct tcgccgggcc accaccgggc
      601 gcccgccgcg gtgcggcccg ggtgtcgaca cccaccgcat cgctccgctc gatggtccgt
      661 gtccccttca tggacccgtc gacatcgtcg cccgttcgat tccggacctt gagggcgatc
      721 tgactccacc gctcctcgcg ctccttgagc acggaaacca acgacgaggc caggaacagc
      781 gacgagtagg aacccacggc gatgcccacc aggagagcca ccgcgaattc gcgcagggtg
      841 cccgccccca ggatgaacga acccaccacc agcatcgaca agaccgggat ggccgaggtg
      901 atgctggtgt tgatggaccg catggccacc cggttcaagg ccaggttcat gagttccgaa
      961 taggtgtacc gctcggtcgc acctagacgg ccgacgacct ctcgcacctt gtcgtagacc
     1021 acgatggtgt cgtagagcga gtaacccatg atggtcagga aggcgatgac cgtagctggg
     1081 gtgatctcga accggaagac cgaatagacg ccgacgctca gcacgatgtc gtgggccacg
     1141 gcgaccaatg caccgaccgc catcttccat tccagacgga cggcgatgta catcgccacc
     1201 acgatgaaga agacgatcag tgccttgacc gccttgccgg tgacttcgtc gccccatgtg
     1261 ggtccgacct gctcgaaggc caccacgggg cctagaccag cggccagacc atcacggatc
     1321 tccgcggcgc gggccggatc ctgaacgtcg gagcgcacca ggaccagatc gtcgtcaacc
     1381 agttggatgc gggcctcggg cgccccgagg tcggccatca actcacgggc gtcagctacc
     1441 gacacgtcag gtgcccggac ctcataagag gttccaccct cgaagtcgag gcccaggttc
     1501 aggccaaaga cggcaaacga aagcaggccc aggacgacgg ccaccaccga cgtggtgacg
     1561 gccgggcgcc acagcaaggg aaagtcgacc ggcgattcgc cgcgatagag ggctcgtagg
     1621 gtcttcatgc tccgacctcc gatgggactg cgccccttcg agccgacacg gcacccgagg
     1681 cgggcaggcc gaagcgttca gggtgatcgg caaaccagcg tgtggtggcc agcaggcgca
     1741 ccatcggacc catgaagaag taggtggcca ccaggtccag gatggttgcc aggccgaggt
     1801 agagggcgaa gccccgaaca gcaccgacgg tgagcgccca caacaggccg gcgccgatca
     1861 gcgaagccag atcggctttg acgatggtcg aaaaggcgat cggaaaggcc cggtcgaccg
     1921 aggaccgggc agttctaccg tcgcggacgt cttccttgag gtgttcgaag tagacgatgt
     1981 tggagtccac cgagacgccg acggccacga tcatgccggt gataccggcc agcgtgaggg
     2041 ccaaccccga ctgggttccg aggtgggcga tgatggccca caggagcaca ccggagatcc
     2101 cgagactcaa cagagccacc agaccgagga tgcggtagta ggtcacgatg aacagggcaa
     2161 ccagtagcag gccgaccagg ccggctacca cgccggccct cagggagtcc tcgccaatgg
     2221 tcgccgacac caccctggtg ttatcgggtt cgagttccac gggcagcgcg ccgtagcgca
     2281 gcgagagcga cacgtcgtcg gcctcggcct tctcgaaccc accggagatc aggatggcgt
     2341 cgtgctggaa ctggggcgcc cggatggatg gtgcggtgac cacttggcca tcaagcacga
     2401 tggctagacg gccgttggtc gaaccgacag ccagggggca cgaggggtca cccgtgtagc
     2461 accgggccgc cacctcgttg aaaccgtcga tgccgacctg tccctgatgg aggtccagtc
     2521 cgacctgcca ctggtagtcg atgaacagcg ggttggcgtc agcgatcgct tcaccggtca
     2581 ggaccgatgg tcccagcagg tagcgctggc cggcggtgtc gccacgaagc cccagcacca
     2641 cgaagttctc ggcaagatcg tcctccgggg cggtgtaccc gtcggcaccg atggccggca
     2701 ccaccgctcc ggtattgacc tccgaacaca tggcatgggc agtcgaccac gagcctgacg
     2761 ccggtgtctc gggacggact gtcgaggtga cgctacagac cggccggaag cgaagttcgg
     2821 ccgtggtgcc cacgagcgac agggcccggt cctggtcgtc cacccccgga agcgagacca
     2881 gcacaccggt ctcggtccgg gagatctcgg gttcggccac gccgagtcca tcgacccggt
     2941 cacgaatgat cgacaccgtc tggtcgagca tctcctcggt ggccggctcg gtggctacca
     3001 gccgaaccga cacgccaccc tgcaggtcga gcccgagcag gggcttgttg ccccagacca
     3061 cggtcatggt cgaggcgagg acgctcagga tgacgatccc gagcaggtag acaagttgac
     3121 ggcggggcat ttcggcgacg cagggttccg gtgacggtgg agccgctcag gcctcgtctg
     3181 aaccggtctc ttcggaaccg gtctcttcgc ccggttccgc ggtgaccggt tcctcagcaa
     3241 ccagttcctc gtcaacggtg gtgggctcgt tgaagcgacg atccacggca cttcgcagaa
     3301 ccttcagctc gatgcccgag tacacctcaa tccacagcac gtgctcgtcg tcgccgtcga
     3361 cctccttcac gaccccgaag atgcccgagc tgaggaccac ctcatcaccc gccgagatcg
     3421 acgatacgag tgcctgctgc tccttcacct tgcgctgctg cggtcggatc atgagcacgt
     3481 acatgagccc gaagatgagg atcaggggga tgaagccggc cacgggaacg ctcctagaga
     3541 ggggatttga gaggggattt gagacaatga tccggacgac ctgatggccg ccagtggacc
     3601 ccgtgagcct acgccgagcc gcgagtacct cgacaggtaa cccgggagat agcgggcagg
     3661 caacccgtcg ggcacccgtc ggtgcctaac cccagacggt cagggtgtcg ctccggaacg
     3721 cctcgaacgt tccggcctcg atggatgccc ggagacgatc cacgaagtcc agcaaccagg
     3781 ccaggttgtg catcgagagg agccgaccac cggtgggttc gtcggtcatc aggaggtgtc
     3841 gcaggtaagc cctggaccac cgcccagccg ggctggccgg gaaagcggga tccaggggcg
     3901 aatcgtcggt ggcaaaccgg gcgtttcgca ggttgagacg tccagcagtg gtcagcactg
     3961 tcccgtgccg cgcgtgccgg gtgggcagga cgcagtcgaa catgtcgatc ccggccgcca
     4021 ccacctcgac gaggcccgcc gggtccccga gacccatgaa gtagcgcggt tggtcggccg
     4081 gaagcaaact cgtcaccgca gccaggggct ccagcatctg gtcacgggtc tctcccacgc
     4141 tgagaccacc caccgcgtag ccgtcgaaac ccacctcgag ggtccgctcg gcgctctcta
     4201 tccgcagacc ggtgtcggtg cctccctgca cgatgccgaa ctggctctgc cggccagcgg
     4261 catccgggtg ttccaggaag gcccgacggc cccggccggc ccatgtcgcg gtgcggacta
     4321 ccgcggcccg gaggaccttc tccgttgccg gcagggcagg acacacgtcc aggaccatct
     4381 ggatgtcagc tcccaggtcg gcttggactt cggctgcccc ctccggggtg agcacgtggg
     4441 tggacccgtc ataggtcgat cgaaaggtgg cgccctggtc atcgaccttc ggcttcagcg
     4501 agaagatctg gtagccacct gagtcggtga gggtgagccc ctcccaaccg gcgaaggcgc
     4561 ccagtccccc gtgtgcccgg atcacctcgg cacccggtcg cagcatcagg tggtacgtgt
     4621 ttccgaggac cacctcggct cccagttcgg ccagatcgac cgatgagagg tgccgtaccg
     4681 ctcccctcgt tccgaccggc atgaagcatg gggtccggaa cgttcccccg ggcacccgaa
     4741 ccgtgccgga acgtgcgcct ccgtcgatcg ccgactcggt gaactcggct ctcaccggtc
     4801 tgtctccccc ggtagatccg tcgcggtgcg ggccaccagc atggcgtccc cgaacgagag
     4861 gaagcggtac c
//
LOCUS       DASCMR010000338         5034 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001649677, whole genome shotgun sequence.
ACCESSION   DASCMR010000338 DASCMR010000000
VERSION     DASCMR010000338.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5034)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5034)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5034
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001649677"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..991
                     /locus_tag="QGG16_08030"
     CDS             <1..991
                     /locus_tag="QGG16_08030"
                     /inference="COORDINATES: protein motif:HMM:NF019474.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJP25260.1"
                     /translation="NFADSQSRRNPMPVASDLQPLLDVIANRRDPDGPIDVEELREGY
                     RALCTSGQHLAAEVSEVTERMIPGPDGDLPIRVYRAEGLGDRAPVVLHLHGGGWTIGD
                     LEGYDEQFRAVASTAGAVVVALEYRLAPEHPFPAAVDDSWAALCWVSEHAAELGIDPE
                     RLVVAGDSAGGNLSAILSLLARDRGGPTIAHQFLIYPATDFDYDSGRWPSLEENATGY
                     FLELRTMRWFAENVAGDQDLTAEPLAAPIRAENHVGLPPATLMVGGFDPLRDECLGYA
                     EVLRSAGVPVDVIYHEEQIHGYWIVAPLVPSSEAARDTDLAALRAAVGALPVG"
     gene            complement(1040..2299)
                     /locus_tag="QGG16_08035"
     CDS             complement(1040..2299)
                     /locus_tag="QGG16_08035"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HJP25261.1"
                     /translation="MTETGVGRDTVPNEGVATGPMRGVKVVELGVWVAGPAAGGILAD
                     WGADVVKIEPPSGDPCRMFQWMLGGDMPTNPIFEMDNRSKKGIAVDLGTDDGMAIAME
                     LLADADVFVTNLRVGALERLGLDHASVSERLPRLVYCQITGYGSEGPDADRAAFDIGA
                     FWARSGVAGLLTPPGGDPPFQRGGMGDHSTGLAAAAAVSAALFDRERTGQGQLVETSL
                     IRQGAYTISFDLNLLLMWGVTLEIGERTSMGNPAMNNYTAGCGRRFWIVGLEGERHWP
                     PLARAVGHPEWLDDERFARPRERAANASELVSMLDGIFATQTLDEWTEVFATEPDFFW
                     APINSPDDLLADPAFHGSGALVDVPDDVSSTTMVATPVDFRGTPWAARSTAPTIGQHT
                     REVLMAMGRTGAEIDALVAAGTVAEPN"
     gene            2425..2982
                     /locus_tag="QGG16_08040"
     CDS             2425..2982
                     /locus_tag="QGG16_08040"
                     /inference="COORDINATES: protein motif:HMM:NF013607.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25262.1"
                     /translation="MILFVCTGNTCRSAMAEAVLRARLNERGGDVSALFPTVASAGTE
                     VRGGADGAGAHPLAVEVLAERGIDLGGHVSRSLTFELVAGADLVVAMTRLHQAAVSAL
                     DPPVRARNFLAGEVVRLGGLVGPREDRPLDEWIRVLDGARGGHFTTGRVADEVADPWG
                     EPINEYRRCADRLDGIATALARLLA"
     gene            3047..4258
                     /locus_tag="QGG16_08045"
     CDS             3047..4258
                     /locus_tag="QGG16_08045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP25263.1"
                     /translation="MDFTRTPTEEAFADEVRTWLAEHLVGEFADLRGRGGVGQEDVAP
                     ELLLEWERELASGGWLGIDYPVHLGGRDATLTEQVIFHQTYVEARAPGRFPNIGLNLL
                     GPTVVAYGTEAQQERFVRPILAGIEHWCQGYSEPDAGSDLANVATRARLDGDRWLVTG
                     QKIWTSLAQFAQWAFVVCRTDPTTERHAGLSYLLVPMDQAGIEMRPIVQITGGTEFNE
                     VFFDDAETDADLVVGEVGGGWAVAMGTLGFERGASTLGQQTGYRQELDALMDLARNNG
                     SIEDPSLRQDLMRAWSELEILRYNQLRMLTALVADGVPGPEMSIGKLYWASWHRRLGE
                     LGIRIRGASGMIGVDATSPLEDPLGANYRLDRLQRTFLYSRSHTIYGGSNQVQRNVIG
                     ERVLGLPREPR"
     gene            4339..>5034
                     /locus_tag="QGG16_08050"
     CDS             4339..>5034
                     /locus_tag="QGG16_08050"
                     /inference="COORDINATES: protein motif:HMM:NF012336.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="steroid 3-ketoacyl-CoA thiolase"
                     /protein_id="HJP25264.1"
                     /translation="MSEAYIVDAIRTPTGKKGGGLSQVHPADLGAHVISGVLERNDVD
                     PMAVDDVVMGCVDNLGPQAGDIARTAWLAAGLPEAVPGTTVDRQCGSGQQAVSFAAMG
                     VMAGVQDLVVAGGMQNMSMIPIGLALEAAKPFGHEDPFSGSTGWVDRYGTQEVSQFRG
                     AEMIAEKWDFSRETMEAFAFESHQRAIRAIDEGRFDSEVSPLADVEADEGPRRGGSLE
                     KMAQLAPLVEGGRI"
BASE COUNT          842 a         1637 c         1707 g          848 t
ORIGIN      
        1 caactttgct gactcccagt cccggaggaa tcccatgcct gtcgcttccg acctgcaacc
       61 actgttggat gtcatcgcca atcggcggga tcccgatggc cccatcgatg tcgaggaact
      121 ccgggagggt taccgggccc tctgcaccag tgggcagcac ctcgccgccg aggtgtctga
      181 ggtaaccgaa cggatgattc ccgggcccga tggcgacctc ccaatacgcg tctaccgggc
      241 ggaggggctg ggcgaccggg cccccgtggt acttcacctg catggtggcg ggtggacgat
      301 tggcgacctg gagggctacg acgagcagtt tcgggccgtg gcgtcaaccg ctggagcggt
      361 ggtggtggcc ctcgagtacc ggcttgcccc cgagcatccc tttccagcgg ccgtagacga
      421 ctcctgggcg gccctctgct gggtgtcgga gcacgcagcc gaactcggga tcgatcctga
      481 gcgactggtg gtggccggtg acagtgccgg cggcaacctg agtgcgattc tgtctctgct
      541 ggccagggat cgtggtggtc cgaccatcgc ccaccagttc ctgatctatc cggccaccga
      601 tttcgactac gactcaggac gctggccgtc gttggaggaa aacgccacgg ggtacttcct
      661 ggagttgagg accatgcggt ggttcgccga aaacgttgcc ggagatcagg atctgaccgc
      721 agagccccta gccgcgccga tacgcgccga gaaccatgtg ggccttccgc cggccacctt
      781 gatggtgggc ggtttcgatc cgctacgaga tgagtgcctg ggctatgccg aggtgctccg
      841 atcggctggc gtgccggtcg atgtgatcta tcacgaggag cagatccacg ggtactggat
      901 cgtcgctccg ctggtgccgt catcggaagc ggcacgagat accgacctgg cggccctacg
      961 agcggccgtc ggggcgctgc ctgtcggtta gccccgtcgg ttaggcccag tcggaaggcc
     1021 cgtcgaccag gcccgcaggt cagttcggtt cggccaccgt tccagcagcc accagggcat
     1081 cgatctcggc accggtacga cccatggcca tcagtacctc gcgggtgtgc tggccgatgg
     1141 taggcgccgt cgaccgggcc gcccacggtg tcccacggaa gtccaccggc gtggccacca
     1201 tggtggtcga cgacacgtcg tcgggaacgt cgaccagagc gcccgaaccg tggaaggcag
     1261 ggtcggccaa taggtcgtcg ggtgagttga tgggcgccca gaagaagtcg ggttccgtgg
     1321 cgaacacctc ggtccactcg tccagcgtct gggtggcgaa gatcccgtcc agcatgctga
     1381 cgagttcaga tgcattggcc gcccgctccc ggggtcgggc gaaccgctcg tcgtccaacc
     1441 actcggggtg gccgactgcc cgggccaacg gcggccaatg gcgctcgccc tccagcccga
     1501 cgatccagaa ccgtcgaccg cagcccgccg tgtagttgtt catggccgga ttacccatag
     1561 acgtgcgttc gccgatctcc agggtgacgc cccacatcag tagcaggttc aggtcgaaac
     1621 tgatggtgta ggcgccctgg cgaatgagcg acgtttcgac gagttggccc tgaccggtcc
     1681 gttcccggtc aaacagggcg gctgacactg cggcggcagc ggcgaggccg gtcgagtggt
     1741 cgcccatccc accacgttgg aagggaggat cgccgcccgg tggcgttagc aggccggcca
     1801 ccccggaccg agcccagaag gcgccaatgt cgaaggccgc ccggtcggca tcgggaccct
     1861 cggagccgta accggtgatc tggcagtaca cgaggcgagg tagtcgctcg ctgaccgacg
     1921 cgtgatcgag gcccaggcgt tcgagcgcac cgacccgaag gttggtcacg aacacatcgg
     1981 catcggccag gagttccatg gcgatagcca taccgtcgtc ggttccgagg tcgacggcga
     2041 tgcccttttt ggatcggttg tccatctcga atatcgggtt ggtgggcatg tcgccgccca
     2101 gcatccactg gaacatgcgg cacgggtcgc ccgacggggg ttcgatcttg accacgtcgg
     2161 ccccccagtc ggcgaggatc ccgccggcgg cggggccggc gacccacaca ccgagttcca
     2221 cgaccttcac gcctcgcatg gggccggtcg ccactccctc gttcggaacc gtgtcccgac
     2281 caactcctgt ttcagtcatg tccgccactt cctcctgagg ctgcgacaga caggatggtg
     2341 ataatcaacg ggaaaacgtt ctccatgatt gagtgtccca tgggaccgac ggtccgacaa
     2401 gaacacgccg ggtaccgtcg gacggtgatc ttgttcgtgt gtaccggcaa cacctgccgg
     2461 tcggccatgg ctgaggcggt gctgcgggcc cgcctgaacg agcgcggcgg ggacgtttcg
     2521 gcattgttcc cgacggtggc atcagctggg accgaggtcc gtgggggcgc ggacggagcc
     2581 ggggcgcacc cattggctgt tgaggtgctc gccgagcgag gcatcgacct cggtgggcat
     2641 gtcagcaggt cgttgacctt tgaactggtg gccggcgccg acctggtggt ggccatgacc
     2701 cgcctccatc aggcagccgt ttctgcgctc gatcccccgg tccgtgcccg gaacttcctg
     2761 gccggcgagg tggtacggct tggagggctg gtcggtccac gggaggatcg accgttggac
     2821 gagtggatcc gggtactgga cggggcccgg ggcggccact tcaccaccgg acgggtggcc
     2881 gacgaggtgg ccgatccatg gggcgaaccg atcaacgagt accgacgatg cgccgatcga
     2941 ctagatggca ttgccacagc tcttgcccgg ctgctcgcct agtcgaagga aataggttga
     3001 tctgacggac cgtcagatca atggagggcc ggagtaccgt ttggccgtgg acttcacccg
     3061 taccccgacc gaagaggcct tcgccgacga ggtacgcacc tggctagcgg aacacctggt
     3121 gggcgagttc gctgacctac ggggtcgtgg cggggtaggc caggaagacg tggcccccga
     3181 actcctcctg gagtgggagc gcgaactggc ctccggcggg tggctcggca tcgactaccc
     3241 ggtccacctc ggaggacgtg acgccaccct gaccgagcag gtgatcttcc accagacgta
     3301 cgtggaggcc cgggcccctg gacgctttcc caacatcgga ctgaacctgc tcggaccgac
     3361 cgtggtggcc tacgggaccg aggcccagca ggaacggttc gtccgcccga tcctcgccgg
     3421 tatcgaacac tggtgtcagg ggtattccga gcccgacgcc ggctcggacc tggccaacgt
     3481 ggccacccgg gcccgcctgg acggcgaccg gtggttggtc accggccaga agatctggac
     3541 gtcgctggcc cagttcgccc agtgggcctt cgtggtctgc cggaccgacc cgaccaccga
     3601 acgccacgcc ggactctcct acctcctggt gcccatggac caggctggca tcgagatgcg
     3661 acccatcgtg cagatcaccg gtggcaccga gttcaacgag gtgttcttcg acgacgccga
     3721 gaccgacgcc gatctagtgg tcggcgaggt gggcggcggc tgggcggtgg ccatgggaac
     3781 cctcggattc gagcggggag cctcgaccct cggccagcag accgggtacc gacaagaact
     3841 tgatgccctc atggacctgg cccggaacaa cgggtcgatc gaggacccgt cgcttcgcca
     3901 ggacctcatg cgggcatgga gcgaactgga aattctccgt tacaaccaac tccggatgct
     3961 caccgcgctg gtggctgacg gcgtgcccgg cccggagatg tccatcggga agctctactg
     4021 ggcctcgtgg caccgtcgcc tcggtgaact gggaatccgg attcgtggag ccagcggcat
     4081 gattggggtc gacgccacct caccgctcga ggatcccctc ggggccaact accggttaga
     4141 ccgcctacag cgcacctttc tttacagccg gtcccacacc atctacggcg ggtcaaacca
     4201 ggtgcaacgc aacgtgatcg gcgaacgagt cctcggcctg ccacgggagc cccgttaggc
     4261 cgatcggggc caccgactcg ccgtcccgta cgcttttcgc actgatccct ttcctctccg
     4321 caacccagga gcagtcccat gtccgaggcc tacatcgtcg acgccattcg aacgcccacg
     4381 ggcaagaagg gcggcgggtt gtcccaggtg catcccgccg acctgggagc gcacgtgatc
     4441 agcggcgtct tggaacgcaa cgacgtcgac ccgatggccg tcgacgacgt ggtcatgggc
     4501 tgtgtggaca acctcggccc ccaggccgga gatattgccc gtacggcctg gttggctgcc
     4561 ggtctgcccg aggccgtccc cggcaccacc gtggatcgcc agtgcggttc gggccagcag
     4621 gccgtgagct tcgcggcgat gggcgtcatg gccggagtac aggatctggt ggtggctggc
     4681 ggcatgcaga acatgagcat gattcccatc ggcctagccc tcgaggccgc caagccgttc
     4741 ggccatgaag accccttcag cggctcgacc gggtgggtgg atcgctacgg cactcaggaa
     4801 gtgtcccagt tccggggcgc cgagatgatc gccgagaagt gggacttttc tcgcgagacc
     4861 atggaggcct tcgccttcga gagccaccag cgggccatca gggccatcga cgagggccgg
     4921 ttcgattccg aggtcagccc gttagccgac gtcgaggccg acgagggccc tcgtcgaggc
     4981 ggcagcctgg agaagatggc gcaactggcg ccactggtcg agggtggacg gatc
//
LOCUS       DASCMR010000339         3142 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001652007, whole genome shotgun sequence.
ACCESSION   DASCMR010000339 DASCMR010000000
VERSION     DASCMR010000339.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3142)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3142)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3142
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001652007"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(241..969)
                     /locus_tag="QGG16_08055"
     CDS             complement(241..969)
                     /locus_tag="QGG16_08055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005384 - manganese ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0030026 - intracellular manganese ion
                     homeostasis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="VIT1/CCC1 transporter family protein"
                     /protein_id="HJP25265.1"
                     /translation="MSGEHGFLTSRGRVHRHRDVQGGAARAAVFGVSDGLVSNVALIL
                     GIAGASTDAAFVRVAGVSGLLAGAVSMAAGEYVSLRAQAELVERELEIERISIAENPE
                     AETAELAAIYIERGLNPEQARLVATELMSDPEVALDVHAREELGVDPNQLGNPLTAAA
                     ASFWAFSIGAFVPLVPWLVGSGTGAVWASAGLGVSASAAVGGLLARLTERSVVRTVVR
                     QLVVASGACLATYLIGGLLGASVA"
     gene            1020..2132
                     /locus_tag="QGG16_08060"
     CDS             1020..2132
                     /locus_tag="QGG16_08060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25266.1"
                     /translation="MPPSTDRSTALVIGGTGPTGPAIVQGLEARDHRVTIFHTGHHEL
                     DLVSHVEHIHGDPFSADGVVAALGDRTFDVVVACYGRLRVIAEVLAGRCGRFVSVGGT
                     PAYRGYFDPTRFDPIGLPVPTGEDAPRSGEDDDGKSYRVARTEDRLFEHQPDAIHLRY
                     PFVYGPRQIAPLDWCIVRRVLDGRSAIIVPDAGLMAETRAYSENAAHVVLCAVDTPAA
                     GGRCFNVGDEESLTTAQRIALISAELGHDMEVVGMPTHLALPARPLMMQVEPGHRILD
                     LSATRDVLGYRDLVSAREAVGISARWLADNPLESGGTQEAVLEDPFDYAREDRLLDWW
                     RSVTADPPDLDYPNEPGYGLYYSGPGTSRRRADTRI"
     gene            complement(2148..3080)
                     /locus_tag="QGG16_08065"
     CDS             complement(2148..3080)
                     /locus_tag="QGG16_08065"
                     /inference="COORDINATES: protein motif:HMM:NF013088.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HJP25267.1"
                     /translation="MIRREQTDGEAAAEGAQLGAIDWLLLLTAAGIWGSSFLFMDVAL
                     RVEHPGLVAWLRPALGLCFLAVVPGAWRPVDRSDLPTIGLLGFLWMAIPLTMFPLAQT
                     WIDSSIAGMMNSGMPIMTLLAGAAFFGVRTHRLQVAGVMAGMVGILMVGLPTAIGDGS
                     GGSGTGVLGVLLVVVAISCYGIAANIAGPLQRRYGSPAVLVRVLMVATAATLPWGIVG
                     LADSDFAWSAAGSNLAVGIGGTGVAYVAAATLIGRVGPVRMASVTYLVPIVAAVLGVV
                     VLDEILGIWEVAGLATLMVGAWMTTRAVTPAAMD"
BASE COUNT          567 a         1167 c          959 g          449 t
ORIGIN      
        1 ccgcactttc ccgggtagcc gtcgaacgcg acgtcgagtt cgtcgaccac acggaacggt
       61 tcgccgggcc ggacggccga ctggaccccg cgctacacga cgacggcatc catccaaacg
      121 gaaacgggca cctcctcctc gtcgaggccc ttcgcgccct gctggaccct ccctgacgca
      181 gggacccctc ccttcctgcc cgacaatggg acgatcggac tggggggaga cggacgaagt
      241 tcaggccacc gacgctccga gcaaaccacc aatgaggtag gtggccaggc aggccccgga
      301 ggccaccacc agttggcgaa ccaccgttcg cacgacagac cgctcagtca gccgggccaa
      361 cagcccgccc accgccgcgg aggcactcac acccagaccg gccgacgccc agaccgcccc
      421 ggtgccagat ccgacgagcc acggcaccaa tgggacgaac gctccgatgg agaacgccca
      481 gaaactggcc gcagcggccg tcagaggatt tcccaactgg ttcggatcca cgcccagttc
      541 ctcgcgagcg tggacgtcga gggctacctc cggatcggac atgagttcag tggccaccag
      601 ccgggcctgc tcgggattca gccccctttc gatgtagatg gcggccagct cggccgtctc
      661 ggcctccgga ttctcggcaa tggagatccg ttcgatctcc aactcacgtt ccaccaactc
      721 ggcctgtgcc ctaagcgata cgtactcgcc agctgccatc gagactgctc cggccaacag
      781 gcccgacacg ccggccaccc gcacgaacgc cgcatcggtg ctggccccgg cgatgcccag
      841 gatcagggcc acattggaca ccaggccatc gctcacgccg aacaccgctg ccctcgccgc
      901 cccgccctgt acatcacgat gccggtggac tcggccacgc gacgtcagga atccatgttc
      961 tccgctcacc agaccgaccg tagttcccgc cgacggaacg tctcgtagta tccggggcca
     1021 tgcccccgtc gaccgatcga tccaccgcgc tcgtcatcgg tggtaccgga ccgacggggc
     1081 cggccatcgt gcagggcctc gaggcccgtg accaccgcgt gaccatcttc cataccggac
     1141 accacgaact cgacttggtg tcccacgtcg aacacatcca cggcgacccg ttctccgccg
     1201 acggcgtggt ggccgccttg ggcgaccgga cattcgacgt ggtggtggcc tgctacggac
     1261 gcctccgggt catcgccgag gtcctggccg gtcgatgcgg ccggttcgtc tcggtgggag
     1321 gcaccccggc ctaccggggc tacttcgacc ccacccgttt tgatccgatt ggcctgcccg
     1381 taccgaccgg cgaggacgca ccacgctccg gcgaggacga cgacggcaag agttaccggg
     1441 tggcacgtac cgaagaccga ctgttcgagc accagccgga cgccatccac ctccgctacc
     1501 cgttcgtgta cggcccacgc cagatcgctc cgctggactg gtgcatcgtg cgacgggtct
     1561 tggacggacg gtcagccatc atcgtcccgg acgccggact gatggccgag acccgcgcct
     1621 acagcgagaa cgccgcacac gtggtgctgt gcgcggtgga tacgccagcg gccggcggac
     1681 ggtgcttcaa cgtgggtgac gaggagtcac tcaccaccgc ccaacgaatc gccctcatct
     1741 ctgccgaact gggtcatgac atggaggtcg tcgggatgcc cacccacctc gccctgcctg
     1801 cccgaccgct gatgatgcag gtcgagccag gacaccggat cctggatctc tcggccaccc
     1861 gagatgtgtt gggctaccgg gacctcgttt cggcccgtga agccgtcggg atctccgctc
     1921 gttggctggc cgacaatccg ttggagtccg gcggcaccca ggaggccgtc ctggaggatc
     1981 cgttcgacta cgcccgcgag gaccggcttc tggactggtg gcgctcggta accgccgatc
     2041 cacccgacct ggactatccc aacgagccgg gctatggcct ctactacagc ggccccggca
     2101 ccagtcgccg tcgagccgac acccgtatct gatcagcctg cgggcggtca gtccatggca
     2161 gcgggtgtga cggcgcgcgt cgtcatccac gccccaacca tgagggtggc cagcccggct
     2221 acctcccaga tgcccaggat ctcatcgagc accacgaccc cgaggacggc ggccactatg
     2281 ggcactaggt aggtcaccga tgccatgcgg acgggcccca cccggccaat cagcgtcgcc
     2341 gcggcgacat aggccacccc ggtcccgccg atcccgacgg ccaggttcga tccggcggcc
     2401 gaccaggcga aatctgagtc ggcaagcccg acgatgcccc acggcagggt ggccgcggtg
     2461 gcgaccatca acaccctgac cagcacggcc ggcgatccgt atcggcgctg caggggcccg
     2521 gcgatgttgg cggcgattcc gtaacaggag atggccacca ccacgaggag cacgcccagt
     2581 actccggtgc cggaaccacc actcccgtcc ccgatcgccg tggggagtcc gaccatgagg
     2641 atgcccacca tgccggccat caccccggcc acctggagtc ggtgggttcg gaccccgaag
     2701 aacgccgccc cggccaacaa cgtcatgatc ggcatgccgc tgttcatcat ccctgcgatc
     2761 gaggagtcga tccatgtctg agccagcgga aacatcgtga gcgggatggc catccacagg
     2821 aaccccagaa ggccgatcgt cgggaggtcg ctccgatcca ccgggcgcca cgcgccgggg
     2881 acaaccgcca gaaagcaaag acccagcgca ggccgcaacc aggccaccag gccgggatgc
     2941 tcgacacgca gggctacatc catgaagagg aacgacgaac cccagattcc ggccgctgtc
     3001 aaaaggagga gccagtcaat ggcccccagt tgggcgccct cagccgccgc ctctccgtcg
     3061 gtctgttccc gcctgatcat cgccgcacgc taccggcggc ccgcattgtg gacggttccg
     3121 attccgcttc cggcccagac gg
//
LOCUS       DASCMR010000340         1581 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001655203, whole genome shotgun sequence.
ACCESSION   DASCMR010000340 DASCMR010000000
VERSION     DASCMR010000340.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1581)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1581)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1581
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001655203"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1556)
                     /gene="pheT"
                     /locus_tag="QGG16_08070"
     CDS             complement(<1..1556)
                     /gene="pheT"
                     /locus_tag="QGG16_08070"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: protein motif:HMM:TIGR00472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HJP25268.1"
                     /translation="MTIIGGGLDGVVVARVLDLRPHPDADRIQLVDVDAGDGEALQIC
                     CGAFNMSVGDLVPLATLGTTMANGMEIARRKMRGEWSNGMLCAAEEIGLGDDQDGIMV
                     LEGSSADDGPTPGTPLAEALELVPDVLYDLEVNPNRPDAMSIAGVARDLAARQGVAFA
                     LPVPDATETGEDAVGRIGVEVLDPDLCGRFVARVVDGIRVGPSPRWLANRLTALGMRP
                     INNVVDASNYVMLELGQPNHTYDLAALGDGGGAVALRVRRASEGEALETLDGEVRTLT
                     ASDGVIADGTDTAIGIAGIMGGASTEVSDNTTSILLEMAWWDPMTITTSSRRLGLRSE
                     ASARFERGSDPEVAERAMRRFVELLADAGATLAPGIVDVRGNLPDRSPVRVRTSRVNA
                     LLGTDLTRDEMADLLTSIEFTNTPVGDDLDVTVPSFRPDSATEIDVVEEVARLHGYER
                     IARTLPRSTITGALTPYQHDRRRIRDAMVGLGLDEVMPVPFLAPGDLERAGLPADGIT
                     VTNPLVAEESV"
BASE COUNT          250 a          559 c          520 g          252 t
ORIGIN      
        1 accgattcct cagccaccag cgggttggtc accgtgatcc cgtcagcggg caggccggcc
       61 cgctccaggt cgccgggggc caggaagggc accggcatga cctcgtcaag ccccaggccc
      121 accatggcgt cacggatccg gcggcggtca tgctggtatg gggtcagagc tccagtgatc
      181 gtggagcggg gcaacgtccg ggcgatgcgc tcgtatccat ggaggcgggc cacctcctcg
      241 accacgtcga tctccgtggc gctgtctgga cgaaagctcg gcaccgtcac gtccaggtcg
      301 tcgccgaccg gcgtgtttgt gaactcgatg gaggtcagga ggtccgccat ctcgtcacgg
      361 gtcagatcag ttcccaggag ggcgttcacc ctgctggtcc gaacccggac cggcgaccgg
      421 tcgggcaggt ttccgcggac gtccacgatc ccgggggcca acgtggcgcc ggcgtcggcc
      481 agtagttcga cgaatcgtcg catcgcccgc tcggccacct cggggtcgct tccccgttcg
      541 aagcgggccg aggcctcact ccggaggccg agtcgtcgcg acgacgtggt gatggtcatt
      601 gggtcccacc aggccatctc caggaggatc gacgtcgtgt tgtcggagac ctccgtcgag
      661 gcgccgccca ttattccggc gatgccgatc gccgtgtccg tcccatcggc gatcacgcca
      721 tcggaggccg tgagcgtccg gacctcgccg tccagggtct ccagcgcctc tccctcgctc
      781 gcacgacgga cccggagcgc gaccgctccg ccaccgtcgc caagggcagc cagatcgtag
      841 gtgtggttcg gctgacccaa ctccaacatc acgtagttcg aggcgtcgac cacgttgttg
      901 atggggcgca tgcccagggc ggtgagacgg ttggccaacc atcgaggcga cggcccgacc
      961 cggatgccgt cgaccacccg ggccacgaat cggccgcaca ggtcggggtc gaggacctcc
     1021 acgccgattc gcccgacggc gtcctcgcct gtttcggtgg cgtccggcac gggcagggcg
     1081 aacgccacac cctgacgggc ggccaggtcc cgggccacgc cggcgatcga catggcgtcg
     1141 ggccgattgg ggttgacctc caggtcgtac aggacatcgg ggaccaactc gagggcctcg
     1201 gcaagcgggg ttccgggcgt gggaccgtca tccgctgaag agccctccag caccatgatc
     1261 ccgtcctggt cgtcacccaa cccgatttcc tctgcggcac acagcatccc gttggaccac
     1321 tcaccacgca tcttccggcg ggcgatctcc atgccgttgg ccatggtcgt acccagggtt
     1381 gccagcggga ccaggtcccc caccgacatg ttgaacgcac cacagcagat ctgcagggcc
     1441 tcaccgtcac cggcgtccac gtctacgagt tggatccgat cggcgtcggg atggggccgt
     1501 aggtcgagca cgcgggcaac gacgactccg tcgagtcccc cgccgatgat cgtcatctca
     1561 tccacagcga gtcccagacc g
//
LOCUS       DASCMR010000341        10990 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001657784, whole genome shotgun sequence.
ACCESSION   DASCMR010000341 DASCMR010000000
VERSION     DASCMR010000341.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 10990)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10990)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10990
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001657784"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..292
                     /locus_tag="QGG16_08075"
     CDS             <1..292
                     /locus_tag="QGG16_08075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HJP25269.1"
                     /translation="FASAGLASTLPRVGSLLGLYFGDGPVAPPTDFDEAKVLADNGRY
                     SKVFHALLERGVALAPGAYEALFPSLSHDDAVVDETIEIAADAASAAVASLV"
     gene            complement(317..1900)
                     /gene="pgi"
                     /locus_tag="QGG16_08080"
     CDS             complement(317..1900)
                     /gene="pgi"
                     /locus_tag="QGG16_08080"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: protein motif:HMM:NF001211.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004347 - glucose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HJP25270.1"
                     /translation="MNAAPKESPTTFPCWRALADLRDAGRPTLRDLFASDPDRGDRLG
                     TVCADLWIDRSRQHLDEAVLDALGHLADQRDVVGFLRRTADGEVVNGSEKRPASHQTL
                     RLGRDAAPADVVATRDRMATLATAIRAGEETGATGSTITALVQLGIGGSHLGPALAVD
                     ALAPFAHPDIEIRFSSSVDADDLAEALDGLDPASTLVIACSKSFTTIETLTTLDGALA
                     WLAGGLGDAAINHVLAVTAAPERAKALGVDVNRIYEIPVAVGGRFSLGSAVGLPVMVA
                     IGPEAFDEMLDGMRVVDNLSATEPPDENAAIQLALIDVWNRCHLGRSSLAVVPYAHRL
                     RLFAPWLQQLSMESLGKGTCENESDPETPTGPTVWGATGTDAQHAFFQLLHQGTDVIP
                     VDLIGVIQPTVDDARSSKGAEVLMTNLAAQADALAFGRTADEVRADGVDEALVAHRTF
                     PGNRPSTAILLSELTPSTLGQLIALYENRTVAMAAVLGINPFDQWGVELGKKMALDLA
                     NGSAPESALLRRARALRDS"
     gene            complement(2004..3293)
                     /locus_tag="QGG16_08085"
     CDS             complement(2004..3293)
                     /locus_tag="QGG16_08085"
                     /inference="COORDINATES: protein motif:HMM:NF013646.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045550 - geranylgeranyl reductase
                     activity [Evidence IEA];
                     GO_process: GO:0015995 - chlorophyll biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0030494 - bacteriochlorophyll biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="geranylgeranyl reductase family protein"
                     /protein_id="HJP25271.1"
                     /translation="MTDHFPDAPVDLLVIGGGPAGAATAYWAASHGLDVAVVERKTFP
                     RDKTCGDGLTPRAVHQLEEMGLGPILERHHRFDGLRAIAHGRTIEMPWPDHTVYPTYG
                     YVVRRCDLDAFVAEHAVTAGATLLQGHEAVRPIDPPDGSTPGAIGGAIVLDKTTDTER
                     AIRARHVVVADGANSRFGRALGTVRDRTYPMGMAIRGYFESPLHDDPWIESSLDVRDR
                     EGSAMPGYGWIFPVGNGTINVGIGLLSTFRDYKQVNTSHLFEEFACTLPEHWQIDPTR
                     PIAPPTGGRLPMAGSVGPKAGPNWLVVGDAAGSVNPFNGEGIDYAYETGRMAAGLIAE
                     AAARGDDAILARYPDLLDEEYGLYFKVSRLFARVIGNPTLIRELTRVGMRSQPLMEWA
                     LRIMANLMRDEDRGAAEAAYSAIAGVVRLVPDRLVDA"
     gene            complement(3343..4104)
                     /locus_tag="QGG16_08090"
     CDS             complement(3343..4104)
                     /locus_tag="QGG16_08090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HJP25272.1"
                     /translation="MTDIPEHLLKRAQAAKAKATGSEAPAADTPAEAAAAAPATKAPA
                     AAPAAPAVETPLAPVAPYVAAANARKKIPWWATSGLLLLPIWAISYVGTLERPPQEAT
                     GVLAEGSHVYEVRCASCHGATGAGGSGYALDNGEVLATCPTAAAHIEWVAKGSDGFGL
                     GNTYGDATRGRIVEGGMPGWADVLTTEELIGVVLHERARMSGSADDAALAEAIDHAVD
                     NGDLDLHGHLDPSTVTSDEIQAIMDSVAHEDDGGH"
     gene            4481..4924
                     /locus_tag="QGG16_08095"
     CDS             4481..4924
                     /locus_tag="QGG16_08095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25273.1"
                     /translation="MTSIVVLLVLLGGVDWYRKRTPADKDFTWGEAMLFATYVFFILW
                     WVYGVVPHQWLTWADSELNWRPDRYLIGPELPWTGNKGIVEWGLPFTMTYQVIRDLVA
                     VVIYGIALGGNVVMWRQWQERGKADDAPKPTSEYGRPLIREGAGT"
     gene            4921..5337
                     /locus_tag="QGG16_08100"
     CDS             4921..5337
                     /locus_tag="QGG16_08100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
                     /protein_id="HJP25274.1"
                     /translation="MSVTDANPPHPKFVDDYVLREVDADWMTTNNRVKQFIHIDQAEC
                     IMCEGCVDICPWQCIHMVSPEAVAESVGTEQPGVDPSDHVIFTIDDDVCTRCALCVDR
                     CPTGVIIMGKCSDAPADGDTHQRTNTHGYGYGMRLG"
     gene            5384..6166
                     /gene="extP"
                     /locus_tag="QGG16_08105"
     CDS             5384..6166
                     /gene="extP"
                     /locus_tag="QGG16_08105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenite/tellurite reduction operon b-type
                     cytochrome ExtP"
                     /protein_id="HJP25275.1"
                     /translation="MADDKKPAGQALQEQLGQLTDQVQGSQAWSSIFRPGSIFRKGYN
                     DSPRNRSYVIMNSVLYHLHPVKVKRHAVKVSYTLCLGGLSFFLFILLTVTGIFLMFFY
                     RPTAAQAWDDIQTLQTAVGFGLLVRNMHRWTAHLMVLTVFLHMARVFYHGAYKPPREF
                     NWVIGVMLLQFTLLLSFTGYLLPWDQLALWAVTVGTNMMGFTPVFGEQVRFVLLGGVE
                     IGTDTLLRWYTLHVLMLPFVVVIFMAIHFWRVRKDGGISGPL"
     gene            6195..6914
                     /locus_tag="QGG16_08110"
     CDS             6195..6914
                     /locus_tag="QGG16_08110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinol-cytochrome c reductase cytochrome b
                     subunit"
                     /protein_id="HJP25276.1"
                     /translation="MTEIPEHLRKRAEAAKAKAQGTTDAPSGEAAPGGGAPAADEKIP
                     SHLLDRGTAAADQPGTVAGGPAAPAGSSGPDGHNQRLLTVVKSGSIQDTKATPQDKVH
                     VWPHLLLAEFLAALAITLFSLLFSIFVNAPLLELADFNKTPNPSKAPWYFLGLQELLT
                     MFHPMVAGVTIPGIGLFVLVMAPYIDKNPSKRPEDRKFAISLMTVHLMFWSVLVMIGS
                     FFRGPGFNFVFPWNSGLFFEL"
     gene            6971..7846
                     /locus_tag="QGG16_08115"
     CDS             6971..7846
                     /locus_tag="QGG16_08115"
                     /inference="COORDINATES: protein motif:HMM:NF012575.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HJP25277.1"
                     /translation="MGVAVAVILLLVLAVAVLAGASRRRDRSAVGLSRETRRRDVTNP
                     LLGGSEAEAAPSGREVEAAAVAARSGSGVVAVESAPAEPFVAPDPVAVGVSRRQFFNR
                     SLVGMMGFGLSGFGGASIAFLWPQGVSGFGSKIKVGNVVELLADITANNGFLYKPEGR
                     MWITAYPNGAVEKARANYSAPELAGMTAGVDGGFDAGVIALYQKCPHLGCRVPNCVSS
                     QWFECPCHGSQYNQVGEKRGGPAPRGMDRFAMSVTDGVLTVDTGTIVQGPPIGTNTTG
                     QEAEGPNCIGQAGGH"
     gene            7880..9076
                     /locus_tag="QGG16_08120"
     CDS             7880..9076
                     /locus_tag="QGG16_08120"
                     /inference="COORDINATES: protein motif:HMM:NF012264.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HJP25278.1"
                     /translation="MSTLLLASTQRTIGWVLASVVLVGMFVYLLFSFRIGKREVGSEI
                     DLAPNRVRHADDDELETRFLDRNLAWSLVLLTVVSLILPIYWLMEPARQDNAAYGWVK
                     RFEGRGARTFEEACVSCHGPGGVGGVAQFTIADADGGFVAQVEWKAPALTTVLSRFDE
                     SEVKRILDYGRPGTPMPAWGLPGGGPLTSQQVHQLVVYLRSIQLTPEEAAAEVTSGLQ
                     VGARGIVTARDPGLTNADDTDAAIEAWLAQAADPSSSDYAAYGELLFNNPAAQGANSC
                     ARCHTPGFSYGASSEEATAELMAEWPRLAEAGVLTGYRPGAGHVGPALVGIETHFPTT
                     GGHEDFVRTGSEVGAGYGNARPGTGAMPGFGGRTDDLDVIGTVVRSRILTPEQIAAIV
                     AYERSL"
     gene            9076..10086
                     /locus_tag="QGG16_08125"
     CDS             9076..10086
                     /locus_tag="QGG16_08125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25279.1"
                     /translation="MDSLVTLAGLAWDPEIRGILVVATGFVVLMGSVWLVIATNSGVR
                     LATLMAAAALMGWMVILGSAWWMYGSGWKGDAPSWKTVDINVGDLRASGLSYARELPN
                     PDEIPSAYELVVASGDAVAIAEFDTLPNATDNPDLEAEALNALRADRQLRNETITRSE
                     LAAVARNVTDAAGLRAVGPWRLLATTEAGDAQAQAAADVLAHPDLGFASSADYKLLDA
                     YTMGGKPSLTDDPNRWDRISHWITNSARLTHPTRYTVVQLQGVLFQEVPAGVAPPRPV
                     VDPGEPVVSVVMIRDLGWVRLRPALVTIGSLLVFLALCYWLHVRDKELMERRREFETS
                     SA"
     gene            10113..10598
                     /gene="ndhC"
                     /locus_tag="QGG16_08130"
     CDS             10113..10598
                     /gene="ndhC"
                     /locus_tag="QGG16_08130"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HJP25280.1"
                     /translation="MELGTSDVLGQYLPIIVLLILAFLFAALSFVASRLLAPRSPNDR
                     KAAPYECGIIPGRETPERFPVRFFLVAMIFIVFDIEIIFFYPWAIAHDGLGLFGLVAV
                     LIFSAAVFESFVYLIGNGALEWGPVRRVRHAVSPHRTSSSTVRRAGVREVGLEGRDRD
                     A"
     gene            10598..>10990
                     /gene="nuoB"
                     /locus_tag="QGG16_08135"
     CDS             10598..>10990
                     /gene="nuoB"
                     /locus_tag="QGG16_08135"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoB"
                     /protein_id="HJP25281.1"
                     /translation="MVHLPGLGETSDVMSHGLEGLEHNFVTAKVEDLVKWSRARSCWP
                     ATFGLACCAIEMMATGAAHYDLARYGMEVFRASPRQADLMIVAGRVSQKMAPILRQIY
                     DQMMEPKWVISMGVCASSGGMFNNYAIVQ"
BASE COUNT         1742 a         3614 c         3639 g         1995 t
ORIGIN      
        1 gttcgcctcg gctggtctgg cctcgaccct gccccgggtg gggtccctcc tcggcctgta
       61 tttcggtgac ggcccggtcg ccccaccgac cgacttcgat gaggcgaagg tgctggccga
      121 caacggccgg tactcgaagg tattccacgc cctgctggag cggggcgtag ccctggctcc
      181 cggggcatac gaggcgttgt ttccgagcct ctcccatgac gacgcggtgg ttgatgagac
      241 catcgagatc gcggctgatg ccgcgtccgc tgccgtcgcc tcccttgtct gaggcgagtt
      301 tccgaccggc gcccggttag gagtcgcgaa gcgcccgggc tcgtcgcagc agggccgatt
      361 cgggggctga tccattagcc aggtcgagcg ccatcttctt gcccagctcg acaccccact
      421 ggtcaaaggg gttgatgccc agcacggcgg ccatggccac cgtgcggttc tcgtagagag
      481 cgatcaactg gccgagcgtc gaaggcgtga gctcggagag gaggatggct gtcgatggtc
      541 ggttgccggg gaacgtccgg tgggccacca gcgcctcgtc gaccccgtcg gcccgcacct
      601 cgtcagccgt ccgtccgaag gccagagcat cggcctgggc cgccaggttg gtcatcagaa
      661 cctcagcacc cttgctggac cgggcatcgt cgacggtcgg ttggatcaca ccgatgaggt
      721 ccaccgggat gacgtcggtc ccctggtgga gcagctggaa gaaggcgtgc tgggcatcgg
      781 taccggttgc accccacacc gtcgggccgg ttggcgtctc cggatcgctc tcgttttcgc
      841 acgtgccctt gccgaggctc tccatggaga gttgctggag ccagggggcg aacaggcgga
      901 gccggtgtgc gtacgggacg acggccagcg aacttctacc gaggtgacac cggttccaca
      961 cgtcgatgag ggccagttgg atcgccgcgt tttcatcggg cggttcggtg gccgacagat
     1021 tgtccaccac ccgcatgccg tccaacatct cgtcgaaggc ttcggggccg atggccacca
     1081 tcaccggcag gccgaccgcc gaacccagtg agaatcggcc acccaccgcc accggtattt
     1141 catagatccg gttgacgtcc actccgaggg ccttcgcccg ctcgggtgca gcggtcaccg
     1201 cgagcacatg gttgatggcc gcgtcgccga gcccgccggc cagccaggcc agggcgccgt
     1261 ccaatgtggt caacgtctca atggtcgtga acgacttcga gcaggcgatc accagggtcg
     1321 atgccggatc gaggccgtcg agggcctcgg cgaggtcgtc ggcatcgaca ctcgacgaga
     1381 agcggatctc gatgtcggga tgggcgaacg gtgcgagggc gtcaacggcc agtgctggcc
     1441 ccaggtgact gccgccgatc ccgagttgga ccagggcggt gatcgtggat ccggtggccc
     1501 ccgtctcctc accggcccgg atcgctgtgg ccaacgtggc catccggtcg cgggtggcca
     1561 cgacgtcagc cggagccgcg tcccgaccta ggcggagggt ttgatggctg gccggacgct
     1621 tttcggaacc gttgaccacc tcgccgtcgg ccgttcggcg caggaagcca acgacgtcgc
     1681 gttggtcggc cagatggccc agggcgtcga ggacggcttc gtcaaggtgt tggcgcgacc
     1741 ggtcgatcca gagatcagcg cacaccgttc ccagccggtc gccacggtcc gggtcactgg
     1801 cgaatagatc ccggagtgtc ggccgaccgg cgtctcggag gtcggcgagt gcacgccagc
     1861 aggggaacgt ggtcggggat tccttcggag ctgcgttcac gtcgaccatt ctcgcccggt
     1921 ctgacgtcgg accgcggtca tggccgctag gcgggtccca acccggattc gaatccgctt
     1981 agggaccggc atccagcgag gggtcaggcg tcgaccagac ggtcggggac cagacggacg
     2041 acgccggcga tagccgagta ggcggcttca gcggcccccc ggtcctcgtc gcgcatcagg
     2101 ttggccatga tccgcaacgc ccactccatg agcggctgtg atcgcatccc aacccgggtc
     2161 agctctcgga tgagcgtcgg gttgccgatc accctggcga acagccggga caccttgaag
     2221 tacaggccat actcctcgtc gagtaggtcg ggatagcggg ccaagatggc atcgtcgccc
     2281 cgagcggcgg cttcggcgat caggccagcg gccatccgcc cggtctcgta ggcgtagtcg
     2341 atgccctcac cgttgaacgg gttgactgag ccggcagcgt ccccgaccac tagccagttg
     2401 ggccccgcct tgggaccgac tgaaccggcc atcggaaggc ggccgccggt gggtggggcg
     2461 atgggtcgcg tcggatcgat ctgccagtgc tcggggagcg tgcaggcgaa ctcctcgaac
     2521 aggtggctgg tgttgacctg cttgtaatcc cggaaggtcg acagtaggcc gatgcctacg
     2581 ttgatggtgc cgttgcccac tgggaagatc cagccgtacc cgggcatggc gctaccttcg
     2641 cggtcacgga cgtccagaga ggattcgatc cacgggtcgt cgtgaagcgg gctctcgaag
     2701 tagccgcgga tggccattcc cattgggtag gtccgatcgc gcacggtgcc cagtgcccgg
     2761 ccgaagcgcg agttggcacc atcggccacc acgacgtggc gggcccggat ggcccgttcc
     2821 gtgtcagtgg tcttatccag gacgatcgcg ccaccgatgg cgcccggcgt cgaaccgtca
     2881 ggtgggtcga tagggcggac ggcctcgtgg ccctggagga gggtcgcccc ggctgtcacc
     2941 gcgtgctcgg ccacaaaggc gtccagatca cagcgtcgaa cgacatagcc gtaggtcggg
     3001 tagacggtgt ggtcgggcca cggcatttcg atggtccggc catgggcgat ggcccggagg
     3061 ccgtcgaacc gatggtgccg ctcgaggata ggcccaaggc ccatctcctc gagttggtgg
     3121 acggctctcg gtgtgagacc gtcaccacag gtcttatccc tgggaaacgt cttgcgttcg
     3181 acgaccgcca cgtcgagacc gtgggatgca gcccagtagg cggtggcagc cccagcgggt
     3241 ccaccaccga tgaccaacag gtcaaccggg gcgtcaggaa agtggtcggt cacaacgttc
     3301 tcgacggttg gtgggtttgg gcccggggcc cggtccgggg ggctagtgcc cgccgtcgtc
     3361 ctcgtgggcg acggagtcca tgatggcctg gatttcatcg ctagtcaccg tcgacggatc
     3421 aaggtggccg tgtaggtcca gatcaccgtt gtcgacggcg tggtcgatgg cctcggccag
     3481 cgccgcgtca tcagccgaac ccgacatgcg ggccctctcg tggagcacca caccgatcag
     3541 ttcctcggtg gtgagcacgt cggcccagcc gggcatgccg ccctcgacga tccgtccacg
     3601 ggtggcgtcg ccatacgtgt tgccgagtcc gaagccgtcc gaacccttgg ccacccattc
     3661 gatgtgggcc gccgcggtcg ggcaggtcgc cagcacctcg ccgttgtcca gggcataacc
     3721 gcttccgccg gcgccggtcg caccgtggca actggcgcag cggacctcgt agacatgtga
     3781 accctcggct agaactccgg tggcctcctg agggggtcgc tcgagggtgc ccacatacga
     3841 gatggcccag atcgggagca gcagtagtcc gctggtggcc caccagggaa tcttcttgcg
     3901 ggcgttggcc gcggccacgt acggagcgac gggggccagt ggcgtctcga ccgccggtgc
     3961 ggccggtgcg gcagcgggtg ccttggtggc cggtgcggcc gcagcggcct cagccggggt
     4021 gtcggctgcc ggagcctcgg agccggtggc cttggctttg gcggcctggg cccgcttcag
     4081 aagatgttcg gggatatcgg tcaacgtggg ctccggagga gtctgacggt acggcggttc
     4141 tcggtgttcc ggatagcggt gaagccgacc cggatcggct tgccggtctg gaacaggggc
     4201 aggttagcgg gcggccgttg ggggcgggcg ctccgggcca cgggcacttc atatgtcgtg
     4261 cggaggtggc tggttcaggt ggtcgcgtga tagaaacacc caccggatca ccgccacgtt
     4321 tcgactgctg cccggaccgg ttcgaccact ggtcaaccct tcggacttcg gtcgtcgtgg
     4381 ccggcgtcta accgttagca tggtgcgcac accgcttgtg cattatttca cgaagtccgc
     4441 ttgagccacc gagggagggc ctggatcgat ggtcgcgttc gtgacatcca tcgtcgtgct
     4501 gctcgtcctt ctgggtggcg tcgactggta tcggaaacgc accccggccg acaaggactt
     4561 cacgtggggc gaggcgatgc ttttcgccac ctacgtcttc ttcattctct ggtgggtcta
     4621 cggcgtggta cctcaccagt ggctgacctg ggcggacagc gagctgaact ggcgccccga
     4681 ccgttatttg atcggccctg aactcccgtg gacgggcaac aagggcatcg tcgagtgggg
     4741 cctcccgttc accatgacct accaagtcat ccgtgacctg gtagccgtcg tcatctacgg
     4801 catcgccctc ggaggcaacg tcgtgatgtg gcgccagtgg caggagcgag gcaaagccga
     4861 cgatgcaccg aagcccacgt cggaatacgg ccgtccgctg atccgggagg gggccggcac
     4921 atgagtgtca ccgacgccaa ccctccgcac ccgaaattcg tcgacgacta cgttctccgc
     4981 gaggttgacg cggactggat gacgaccaac aaccgggtca agcagttcat ccatatcgac
     5041 caagccgagt gcatcatgtg cgagggctgt gtcgacatct gcccatggca gtgcatccac
     5101 atggtctcgc ctgaggcggt ggccgagtcg gtagggaccg aacagccggg agttgacccc
     5161 agcgatcatg tgatcttcac catcgacgac gacgtgtgca ctcgctgtgc cctctgcgtc
     5221 gatcggtgtc cgaccggcgt gatcatcatg ggcaagtgca gcgatgcacc ggctgacggt
     5281 gacacccacc agcggaccaa cacccacggg tacggctacg gaatgcggct gggctgagtg
     5341 gaaatgaacg cacgtatgaa ggtttcacag gagagcggac accgtggctg acgataagaa
     5401 gccggctggt caggcgctgc aggagcagct cggccaactg accgaccagg tccagggttc
     5461 acaggcttgg agttcgatct tccgaccggg ctcgatcttc cgtaagggct acaacgacag
     5521 cccccggaac cggtcttacg tgatcatgaa cagtgtgctg taccacctcc acccggtgaa
     5581 ggtgaagcgt cacgcagtga aggtcagcta caccctttgt cttggtgggc tgtcgttctt
     5641 tctgttcatt ctgttgacgg tcaccggcat cttcctgatg ttcttctatc gaccgaccgc
     5701 cgctcaggcg tgggacgaca tccagaccct gcagaccgct gtgggcttcg gtctgctggt
     5761 acgaaacatg caccggtgga cggcccacct catggtgctg accgtgttcc tgcacatggc
     5821 ccgtgtcttc taccacggtg cctacaagcc accccgggag ttcaactggg ttatcggcgt
     5881 gatgctcttg cagttcaccc tgctgctctc gttcaccggc tacctcctcc catgggacca
     5941 gttagccctc tgggcagtga cggtgggaac gaacatgatg ggcttcacac ccgtcttcgg
     6001 tgaacaggtc cgatttgtgc tgctcggcgg cgtcgagatc ggaaccgaca ccctgctccg
     6061 ctggtacacc ctgcacgtcc tgatgctccc gttcgtggtg gtcatattca tggccatcca
     6121 cttctggcga gtccgcaagg acggcggcat ctcgggtccg ctgtaggtca ggcccgtagg
     6181 cgacaggacg acagatgacc gagatccccg aacatctcag aaagcgggcg gaggccgcca
     6241 aggccaaggc ccagggaacg actgacgctc catctggcga agccgcgccc gggggcggcg
     6301 cgcctgctgc cgacgagaag attcccagcc acctgctgga ccgtggtacc gctgccgccg
     6361 accagcccgg aaccgtcgcc ggtggacccg ccgcccctgc cgggagcagc ggcccagacg
     6421 gtcacaacca gcgactactg accgtcgtca agtcgggttc catccaggac accaaggcga
     6481 ccccgcagga caaggtgcac gtctggccgc acctcctgct cgccgagttc ctcgcggcgc
     6541 tggccatcac cttgttctcg ttgctgttct cgatcttcgt aaacgcaccg cttctcgagt
     6601 tggctgactt caacaagacg ccgaacccct ccaaggcgcc ctggtacttc ttgggcctgc
     6661 aggagctgct caccatgttc cacccgatgg tggccggtgt gaccattccc ggtatcggcc
     6721 tcttcgtgct ggtcatggcg ccctacatcg ataagaaccc gtccaaacgt cccgaggatc
     6781 gcaagttcgc catctcgttg atgaccgtgc acctcatgtt ctggtcggtg ctggtgatga
     6841 tcgggtcctt cttccggggc cccggcttca acttcgtctt cccgtggaac tccggcctct
     6901 tcttcgaact gtgatcgcca tggaaccctt catcccgtcc accattctga tgaagcacag
     6961 gagttgaccc gtgggcgtcg ccgttgcagt catccttctc ctcgtccttg ccgtggccgt
     7021 tctggccggg gcctcccggc gacgcgaccg cagcgcggtc ggcctatccc gtgagacacg
     7081 ccggcgagac gtgaccaacc ccctgttggg tgggtccgaa gctgaggcgg ccccgtccgg
     7141 tcgcgaggtc gaggccgccg cggtcgcagc ccgatccggg tccggcgtgg tggccgtgga
     7201 gtcggcgccc gccgagccgt tcgtggcccc cgacccggta gccgttggcg tgagccgccg
     7261 acagttcttc aaccggagcc tcgtcggcat gatgggcttc ggcctctcgg gcttcggtgg
     7321 cgccagcatc gccttcttgt ggccccaggg cgtgagtggt tttggttcca agatcaaggt
     7381 gggcaacgtc gtggagttgc tagccgacat caccgccaac aacggctttc tgtacaagcc
     7441 ggagggccgg atgtggatca ccgcctaccc gaacggcgca gtcgagaagg cccgtgccaa
     7501 ttattcggcg ccggaactgg ccggcatgac ggctggcgtg gacggcggct ttgacgccgg
     7561 cgtcatcgcc ctctaccaga agtgccccca tctgggctgc cgggtgccga actgtgtgtc
     7621 ctcgcagtgg ttcgagtgcc cgtgccacgg ttcgcagtac aaccaggtag gcgagaagcg
     7681 aggcggtccg gctccccggg gcatggaccg ttttgccatg tcggtgactg acggtgttct
     7741 caccgtagac accggcacca ttgtccaggg ccccccgatt ggtacgaaca ccaccggcca
     7801 ggaggccgag ggtccgaact gcatcggcca ggccggcggc cactagtccg tcgagacgca
     7861 cgagatcgca gagacaccga tgagcacact tctcctcgca agcacacaaa ggaccatcgg
     7921 ctgggtcctc gcgtctgtcg tcttggtggg catgttcgtc tacctgttgt tcagttttcg
     7981 catcggcaag cgggaggtcg ggtccgagat cgacttggct cccaaccggg tgcgccacgc
     8041 cgacgacgat gagctcgaga cccggttcct ggaccgcaat ctggcctggt cgctggtcct
     8101 gctcaccgtg gtctccctga tcctccccat ctactggctc atggagccgg cccgccagga
     8161 caacgcggcc tacggctggg tcaagcggtt cgagggacgt ggagcacgga ccttcgaaga
     8221 ggcgtgcgtg agttgccacg gccccggagg cgtgggtggc gtggcccagt tcaccattgc
     8281 cgacgccgac ggtggcttcg tggcccaggt cgagtggaag gccccggcgc tcaccacggt
     8341 cctgagtcgc ttcgacgaat ccgaggtcaa gcgcatcctc gactacggcc gacccgggac
     8401 gccgatgccc gcatggggcc tacccggcgg cggtccgctg acctcccagc aggtccatca
     8461 actcgtcgtc tacctgcgct ctatccagct gacgcccgag gaggcggccg ccgaggtgac
     8521 aagcggtctg caggtcggcg caaggggcat cgttactgct cgtgacccgg gtctgaccaa
     8581 tgccgacgac accgacgcgg cgatcgaggc ctggctcgcc caggccgccg atccgtccag
     8641 cagcgactac gccgcctacg gcgagttgct cttcaacaac ccggcagccc agggcgccaa
     8701 cagttgcgcc cgctgccaca cgcccggttt ctcctacgga gcctcgagcg aggaggccac
     8761 cgctgagctc atggccgagt ggccccgtct ggccgaggcc ggcgtgctca ccggctaccg
     8821 accgggagca ggccacgttg ggccggctct cgtgggcatc gaaacccact tcccgacgac
     8881 cggtgggcac gaggactttg tccgcaccgg ttcggaagtt ggcgccggct acggaaacgc
     8941 ccgtcccggc accggcgcca tgcccggctt cggtggccgc accgacgacc tcgacgtgat
     9001 cggcacggtc gtgcggtccc gcatcctcac cccggagcag atcgccgcca tcgtggcgta
     9061 tgagaggagc ctctgatgga cagcctcgtc acgctggccg gcctggcatg ggaccccgag
     9121 atccgaggca tcctggtcgt cgccaccggc ttcgttgtcc tcatgggatc ggtctggctg
     9181 gtcatcgcca ccaattcggg tgtccggctg gccaccctga tggccgccgc cgcactcatg
     9241 ggctggatgg tcatcctggg cagcgcctgg tggatgtacg gctctggctg gaagggtgac
     9301 gccccgagct ggaagaccgt ggacatcaac gtcggggacc ttcgggccag tggcctgtcg
     9361 tacgcccgtg agttgcccaa tccggacgag atcccgtcgg cctacgaact ggtcgtggcc
     9421 tctggcgacg ccgtggcgat tgcggagttc gacacgctcc ccaacgcgac cgacaacccg
     9481 gacctggagg ccgaggcact caatgccctt cgagccgacc gccagttgcg aaacgagacc
     9541 atcactcggt cggagcttgc tgccgtggcc cgcaacgtga ccgatgccgc gggtctccgc
     9601 gccgttggtc catggcgcct cttggccacc accgaggccg gcgacgcgca ggctcaggcg
     9661 gccgctgacg tgctcgccca tcccgatctc gggtttgcta gttcggccga ctacaagttg
     9721 ctcgatgcct acaccatggg tggcaagccc tcgttgaccg atgatccaaa ccgttgggac
     9781 cggatcagcc attggatcac caactcggcc cgactcaccc acccgacccg ctacacggtg
     9841 gtgcagttac agggggtgct attccaagag gtccctgccg gcgtggcccc gccccgtccg
     9901 gttgtcgacc ccggtgagcc cgtcgtgtcg gtggtgatga tccgtgatct cggatgggtt
     9961 cgcctgcgac ctgcactggt caccatcggt tcgttgctgg tcttcctggc cctctgctac
    10021 tggctccacg tgcgtgacaa ggagctcatg gagcggcgca gggagttcga gaccagcagc
    10081 gcctgacctc gtgatcaatc ccgtggtcgt gggtggaact ggggacgagt gacgtgctcg
    10141 gccagtacct ccccatcatc gtcctcctga tcctggcgtt cctgttcgcc gccctcagct
    10201 tcgtcgcctc gcgcctgctc gccccccgaa gcccgaatga ccgcaaggcc gcgccctacg
    10261 agtgcgggat catcccggga cgtgagacgc ccgagcggtt ccccgtccgg ttcttcctcg
    10321 tggcgatgat cttcatcgtc tttgatatcg agatcatctt cttctacccg tgggccattg
    10381 cccatgacgg tctcggcctg ttcggtctgg tggccgtcct catcttctcg gcggcggtat
    10441 tcgagtcgtt cgtgtacctg atcggcaacg gggcccttga gtggggtccg gtacgtcggg
    10501 tccggcacgc cgtgtcaccg caccgcacct cgtcgtccac cgttcggcgg gccggggttc
    10561 gcgaagtggg gctcgaggga cgggatcggg acgcctgatg gtgcaccttc ccggactcgg
    10621 cgagacctca gacgtgatgt cccacggcct cgagggcctc gagcacaact tcgtcacggc
    10681 caaggtcgag gatctcgtga agtggtcgcg ggcccgaagt tgctggccgg cgacgttcgg
    10741 cctggcgtgc tgcgccattg agatgatggc caccggtgcc gctcactacg acctggcccg
    10801 ctacggcatg gaggtcttcc gggcctcgcc acgtcaggcc gacctgatga tcgtggccgg
    10861 ccgggtgtcc cagaagatgg ctcccatcct gcgccagatc tacgaccaga tgatggagcc
    10921 caagtgggtc atttccatgg gcgtgtgcgc gtcgagcggc ggaatgttca acaactacgc
    10981 cattgtccag
//
LOCUS       DASCMR010000342         1875 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001664061, whole genome shotgun sequence.
ACCESSION   DASCMR010000342 DASCMR010000000
VERSION     DASCMR010000342.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1875)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1875)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1875
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001664061"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..875)
                     /locus_tag="QGG16_08140"
     CDS             complement(<1..875)
                     /locus_tag="QGG16_08140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25282.1"
                     /translation="MDRGRASSLGGTVDAAPSPVSGQPSPAAGNTPTPRASSARVLAV
                     MVVADEAPALEATLTGLASQDHPRTDMLVVDVRRDGDGSGPSLVERVGLIAPSSLVVQ
                     APGVRGGGPAVSAGLRAWATAHPTASDPRFLLFVPGPVVLGDTAVRRLVERAVEANAA
                     VVGPKVIGPDGVLEEMGWWFDALGSPVPVVPDPEFDQGQHDDYLQPEAVAGAAWMVRA
                     DLFAELGGFDPEGVDGTAHLGFCQRAGSAGASVLVVPSAVARRVGAPEAVRHPPELVR
                     SRFRLRQALAAPLGRL"
     gene            964..>1875
                     /locus_tag="QGG16_08145"
     CDS             964..>1875
                     /locus_tag="QGG16_08145"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF027681.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HJP25283.1"
                     /translation="MKALVTGAAGFVGRHLVAHLEAEGDDVTTTDRAAGGADLLATED
                     LHSEIADASPEVVYHLAGQADVGGSWDDAAGTLRSNAEGTLNLLASARRHGVRRVVTV
                     SSADLYGIVAPDDLPLAEDAPLRPVSPYGASKAAADLIALQAFLGHQQDVVRARSFNH
                     LGPGQSDRFVCSALAARVVANELAGHDVVTVGNLEARRDFTDVRDVVRAYRRLAVDGE
                     PGAAYNVCTGRSVAVSDIAHRLLAMSDRSMRLEEDPALHRPTDVPELVGDPSRIHHDT
                     GWTPEITLDATLADLLDDWRRRLREPAP"
BASE COUNT          295 a          715 c          627 g          238 t
ORIGIN      
        1 agtcgaccga gaggtgcggc caaagcctgt cggagccgga acctcgaccg gacgagttcc
       61 ggagggtgcc gtaccgcttc gggggcgccg acccgtcggg cgaccgccga cgggaccacc
      121 agcaccgacg ctccggcaga accggcccgt tggcagaacc ccaggtgggc cgtgccgtct
      181 accccctcgg gatcgaagcc acccagctcg gcgaacaggt cggcacgcac catccacgct
      241 gcaccggcca ccgcttcggg ctggaggtag tcgtcgtgct gaccctggtc gaattcggga
      301 tcggggacca cgggcaccgg cgagccgagg gcgtcaaacc accaacccat ctcctcgagc
      361 accccgtccg gaccgatgac cttgggcccg accaccgcgg cattggcctc cacggctcgc
      421 tccaccaggc gacgcaccgc ggtatccccg agaacgaccg gtcccggaac gaagaggagg
      481 aagcgcggat cggacgccgt cgggtgggcc gtcgcccacg cccggagacc ggccgacacc
      541 gccgggccac cgccgcgcac cccgggcgcc tgaacgacca gagacgacgg tgcgatcaac
      601 cccacccgtt ccacgagcga tgggcccgaa ccgtctccgt cgcgacggac gtcgacaacc
      661 agcatgtcgg tccggggatg gtcctgagag gccagaccag tcagcgtcgc ctcgagcgcc
      721 ggtgcctcgt cggccacgac catcacggcc agtacccggg ccgacgaagc acggggggtc
      781 ggagtattac ctgcggcggg gctgggctga ccgctgacgg gggaaggtgc ggcatccacg
      841 gtgccgccga gactactggc gcgaccccga tccacccgat cgactcaccg ccctgacggg
      901 cgcctgctcc tacgatgctc cgatggacgc tccccgacag gcccgttccc ggatggccga
      961 ctgatgaagg cactggtcac cggtgccgca ggcttcgtgg gccgccatct ggtcgcccac
     1021 ctggaggccg agggtgatga cgtgaccacc accgatcggg cggcgggcgg cgccgacctc
     1081 ctggctaccg aggacctcca cagtgagatc gccgacgcgt cacctgaggt cgtgtaccac
     1141 ctggccggcc aggccgacgt gggtgggtcg tgggatgacg cggcgggcac cctccgatcc
     1201 aacgccgagg gcacgctgaa cctcctggcg tccgcccgcc gccacggcgt ccgccgtgtg
     1261 gtcacggtga gcagcgccga cctgtacggc attgtcgccc ccgatgacct cccgttggcc
     1321 gaggacgccc cgctccggcc ggtgtccccc tacggcgcca gcaaggcggc cgccgacctg
     1381 atcgccctcc aggccttcct cggccaccag caggacgtgg tccgggcacg gtcgttcaac
     1441 cacctcgggc cgggccagag cgaccggttc gtctgttcgg cactggccgc ccgggtcgtc
     1501 gccaacgagt tggccggcca cgacgtggtc accgtcggga acctggaggc ccgccgggat
     1561 ttcaccgatg tccgcgacgt ggtccgggcc taccggcgac tggccgtgga cggcgaaccg
     1621 ggcgccgcct acaacgtctg caccgggcga tcagtagccg tcagcgacat tgcccaccgc
     1681 ctcttggcca tgtccgaccg gtccatgcgt ctcgaggagg acccggccct ccaccgaccg
     1741 accgacgtcc ccgagctcgt gggcgatccg tcccgcatcc accacgacac cggctggaca
     1801 cccgagatca ccctcgatgc gacgctggcc gacctgctcg acgactggcg acggcgcctt
     1861 cgtgagccgg ccccg
//
LOCUS       DASCMR010000343         4578 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001694188, whole genome shotgun sequence.
ACCESSION   DASCMR010000343 DASCMR010000000
VERSION     DASCMR010000343.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4578)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4578)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4578
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001694188"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..659)
                     /locus_tag="QGG16_08150"
     CDS             complement(<1..659)
                     /locus_tag="QGG16_08150"
                     /inference="COORDINATES: protein motif:HMM:NF012792.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HJP25284.1"
                     /translation="MKTPPGTGRPARGPSAPEITYAPIDARWAEELAAIERAAFPTAG
                     IEDLLEVPDILALCETFPDGGFVALDGDTPVGMGVGILIDFDFDDPHHSLDDLIGANS
                     CGNHSDDSDWYYGVTIAVDPGYRRLGIGQELYVLRKDVVRRLGKKGIVAGGVIPGYKD
                     QIDKMSADQYVDRVRAGELYDPTLSFQIENGFEAICAIPDYMDDPAVGGNAVLIVWRN
                     P"
     gene            complement(656..1747)
                     /locus_tag="QGG16_08155"
     CDS             complement(656..1747)
                     /locus_tag="QGG16_08155"
                     /inference="COORDINATES: protein motif:HMM:NF040521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C45 family peptidase"
                     /protein_id="HJP25285.1"
                     /translation="MRRPPLRILDLAGSHEAMGHAHGMAHADEIRAYADERVRLAGSS
                     FWAGGEIDRTEVLDIARSCLPAHEAHSVDLYSELCGLADGAGITPEEAVVAGGFTDFV
                     DTVRSVVGGRHPLEVQEDDCTAFIVPDARCDGQGFYGQTWDMHDTATPYVVLLRIRPD
                     NSPAALVFTTTGCLGQLGMNEAGVCVGINNLVATDGCRGVMWTSVVRDALTCDSAAAA
                     RDAILDADLAGAHSFLTFDASGDGHMIEAFPTARPTEALADNAQVHTNHAIWDEALAR
                     QAPKQDGLMASSTRRRDRAVELLDRDGIGVEDLMAVTRDDEAICQVSVEPTHIESSGA
                     AIMRPATLDFWAVWGLPSQNEYVHVPFPA"
     gene            complement(1834..>4578)
                     /locus_tag="QGG16_08160"
     CDS             complement(1834..>4578)
                     /locus_tag="QGG16_08160"
                     /inference="COORDINATES: protein motif:HMM:NF012398.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional proline dehydrogenase/L-glutamate
                     gamma-semialdehyde dehydrogenase"
                     /protein_id="HJP25286.1"
                     /translation="ARIEERLRVLYQRAAVAPTPSGRPTFVNLDMEEHRDLELTIRAF
                     TELLDEPELRHLDAGIVLQAYLPDAFGALKRISSWASARHDTRGGEVKVRLVKGANLA
                     MERVDAAVHGWVQTPYETKAEVDANYKRCVDWALRPVHARAVRIGLASHNLFDVAWAH
                     LLAESRGVADRVEFEMLQGMAPAQARTVRDEVGGLLLYTPIVGRDDFDVAVAYLFRRL
                     EENAADDNFLRHLFTLRPGTPEFAEQADGFRRGVADRWEVGDLPRREASRREIPTRTG
                     RATNDGAFRNQPDTDPTLPSVRRRIDAVTGQTFQPTATPMTVTVDGPDGIDAVLVAAR
                     AAQSEWAALGGVGRRAVLQRVADELLVRHDELLVAMAHEASKTFDESAPEIAEAVDFA
                     RWYAERAPELERIDGARFSPLGVVAVIPPWNFPVAIPAGGTLAALAAGNAVVFKPAPE
                     TPRCAEIVAEACWAAGVPTDVLRFVRTPDDEVGRHLVTTADGVILTGGYETADLFRCW
                     DPNLRLFAETSGKNALVVTPQADLDLAAADLVASAFGHQGQKCSAASLGILVGSVAGD
                     ERFLRQVVDAARSLRPGPAHDPATVLAPLVGAPTGKLLDALTVLAPGEEWLLEPRCLD
                     PLPGGEWGRHWTPGIKVGVRPDSSFHRTEVFGPVLGLIAVADLDEALEVQNAVDYGLT
                     GGIHSLDPAEIDCWLDAVEVGNAYVNRGITGAIVQRQPFGGWKRSSVGTGAKAGGPDY
                     LLQLGTWESTGGLDEVDAAGVEASDGEWWETHYGTDQDQAGLFCEANVHRYRPHPDLI
                     IRIGPGGTPAEVDRVLAAAARCGVVPRVSRACDEDDASFVRSMSAHRFGRIRAVGFVS
                     ETVRRAAVTAEVDVVDETVTSSGRLELRHHLREQSVSRTLHRFGNLVASSHTTETVAE
                     "
BASE COUNT          770 a         1601 c         1478 g          729 t
ORIGIN      
        1 tcgggatttc gccagacgat gagaacggcg ttgccgccca ccgctggatc gtccatgtag
       61 tcggggatgg cacagatggc ctcgaacccg ttctcgatct ggaaactgag cgtcgggtca
      121 tagagttcac cggcccgcac ccggtccacg tactggtcgg ccgacatttt gtcgatctgg
      181 tccttgtagc cggggatgac ccctccggcc acgatgccct tcttgccgag gcgccggacg
      241 acatccttgc ggaggacgta caactcctgg ccgatcccaa gacggcgata accgggatcc
      301 acggcgatgg tcacgccgta gtaccagtcc gagtcgtcgg agtggttgcc acacgagttg
      361 gcgccgatca ggtcatccag cgagtgatgc gggtcgtcga agtcgaagtc gatgaggatc
      421 ccgacaccca tgccgaccgg cgtgtcaccg tcgagggcca cgaatccgcc atcggggaat
      481 gtctcgcaca gggccaggat gtccggcacc tcgaggaggt cctcgatgcc ggccgtagga
      541 aaggctgcgc gttcaatggc cgccagttcc tctgcccaac gggcatcaat gggtgcgtag
      601 gtgatctccg gcgcggaagg tcctctggcc gggcggcccg tcccaggcgg cgtcttcatg
      661 caggaaaagg cacgtggacg tactcgttct gactgggcaa gccccagacg gcccagaagt
      721 ccagcgtggc gggacgcatg atcgccgcac cgctggactc gatgtgggtc ggttcgaccg
      781 agacctgaca gatggcctcg tcgtcgcggg tcacggccat cagatcctcg acgccgatgc
      841 cgtcgcggtc caacagttcg acggcccgat cgcgccgacg agtcgagctg gccatcaggc
      901 catcctgctt gggtgcctgc cgggccagcg cctcgtccca gatggcgtgg ttggtatgga
      961 cctgggcgtt gtcggccaac gcctcggtag gccgggccgt ggggaaggcc tcgatcatgt
     1021 ggccgtcgcc gctggcgtcg aacgtcagga agctgtgggc accggcgagg tcagcgtcga
     1081 ggatggcgtc gcgggcagcc gccgccgagt cgcaggtgag ggcatcacgc accaccgacg
     1141 tccacatgac gccccggcag ccgtcggtgg ccaccaggtt gttaataccc acgcacacgc
     1201 cggcctcgtt catgcctagt tggcccaggc atcccgtggt ggtgaacacc agagcggccg
     1261 ggctgttatc gggccggatc cgcagcagga ccacgtaggg ggtggccgtg tcgtgcatat
     1321 cccacgtctg gccgtagaac ccttgcccgt cacaccgtgc atcggggacg atgaacgcgg
     1381 tgcagtcatc ctcctggacc tccaggggat gcctccctcc gaccaccgat cgcacggtgt
     1441 cgacgaagtc ggtgaatccg ccagccacca cagcctcctc gggcgtgatg ccggcgccgt
     1501 cggccagacc acacagttcg gaatacagat ccaccgagtg cgcctcgtgg gccggcaggc
     1561 acgatcgggc gatgtcgagc acctcggtcc ggtcgatctc gccgcccgcc cagaaactcg
     1621 atccagcgag gcggacccgt tcatcggcgt aggcccggat ctcatctgcg tgggccattc
     1681 cgtgggcgtg gcccatggcc tcgtggcttc cggccagatc caggatccgc aggggaggtc
     1741 gtctcatttc gtcagtctgg ctcaacccct tgctggatgc aagggattcc gtcgccatca
     1801 ttcccataga cgacgaattt cgttgttaac aatttattct gccactgttt ccgtcgtgtg
     1861 actggaggcc actaggttgc cgaaccggtg cagggtccgg cttaccgact gctcccgtag
     1921 gtggtgtcga agctccagac gaccgctgga cgtgaccgtc tcatcaacca cgtcgacctc
     1981 ggcggtcacc gcggcccgac gcaccgtctc ggacacgaag cccactgctc ggattcggcc
     2041 gaaccgatga gccgacatgg acctgacgaa cgacgcgtcg tcctcatcgc aagcccgact
     2101 cacccgggga accactccac aacgagccgc ggctgccagc acccggtcga cctcggcagg
     2161 cgtccctccg gggccgatgc ggataatcag gtcgggatgg ggccgatacc ggtgaacgtt
     2221 cgcctcacag aacaatccag cctgatcctg atccgtgccg tagtgggtct cccaccattc
     2281 gccgtcggat gcctcaacgc cggcggcgtc cacctcgtcg agaccgcccg tcgactccca
     2341 ggtgcccaac tgcagcaggt agtcgggccc accggccttc gcgccggttc cgaccgacga
     2401 ccgcttccag cccccgaacg gctgacgctg cacaatggca ccggtgatcc cccggttgac
     2461 gtaggcgtta cccacctcga cggcgtccaa ccagcagtcg atctcggcgg ggtccagaga
     2521 gtgaatcccg ccggtcaacc catagtccac cgcgttctga acctcgaggg cctcgtccag
     2581 gtcggccacc gcaatcaggc cgagaactgg cccgaagacc tccgtccggt ggaacgacga
     2641 gtccgggcgc acaccaacct tgatgcccgg cgtccagtgc cgaccccact cacctccagg
     2701 caacgggtcc agacaacggg gctccagcag ccactcctcg ccgggggcca gcacagtcag
     2761 cgcgtccagc aacttgccgg tcggagctcc gacgagcgga gccagcacag tggccggatc
     2821 atgcgccggc ccgggtcgca gcgagcgagc cgcgtccacc acctggcgaa ggaagcgttc
     2881 gtcgccggct accgacccga ccaggattcc caagctggcc gccgagcact tctgtccttg
     2941 gtgaccgaac gccgaggcca ccaggtcggc ggccgccagg tccagatcgg cctgcggggt
     3001 gaccaccagg gcgttcttgc cgctggtctc ggcgaacagc cggaggttcg ggtcccagca
     3061 gcggaacagg tcggccgtct cgtagccgcc ggtcaggatc accccgtcgg cggtggtaac
     3121 caggtgacgg cccacctcgt cgtccggcgt ccggacaaac cgcagaacgt cggtcggcac
     3181 accggccgcc cagcacgcct cggccacgat ctccgcacac cggggcgttt ccggcgctgg
     3241 cttgaatacc acggcgttgc cggcggccag cgcggccagc gtcccgcccg ccggaatggc
     3301 caccgggaag ttccacggtg ggatgacggc caccacgccc aacgggctaa accgagcgcc
     3361 gtcgatccgc tctagttcgg gcgcccgctc ggcgtaccaa cgggcgaaat caaccgcctc
     3421 ggcgatctcc ggtgcggact cgtcgaaggt cttggacgcc tcatgggcca tggccaccag
     3481 cagctcgtcg tgacgaacga ggagctcgtc ggccacccgc tgcaacacgg cacgtcggcc
     3541 gacgccgccc agggccgccc actcggactg cgcggcccgg gcggcgacca gcacagcgtc
     3601 gatgccgtca ggtccgtcga ccgtcacggt catcggagtc gccgtcggct ggaaggtctg
     3661 cccggtcacc gcgtcgatgc gtcttcgcac cgagggcagc gtcggatcag tgtccggttg
     3721 attcctgaag gcaccgtcgt tggtcgcccg ccccgtacgg gtgggtattt cacggcgaga
     3781 ggcctcccgg cgaggaaggt cgccaacttc ccaccgatcg gctacccccc ggcggaaccc
     3841 gtcagcctgt tcggcgaact cgggggtccc cggtcgaagg gtgaataggt gacgcaggaa
     3901 gttgtcgtcc gccgcgttct cctccaagcg acggaacagg tacgccaccg ccacgtcgaa
     3961 gtcgtcgcgc ccgacaatgg gcgtgtacag cagcagccca ccgacctcgt cgcggaccgt
     4021 cctggcctgg gcgggggcca tcccctgaag catctcgaac tccacccgat cggcgacgcc
     4081 ccggctctcg gcgagcaggt gggcccacgc cacgtcgaac aggttgtggc tggcgagccc
     4141 gattcgcacc gcccgggcat ggacgggtcg aagcgcccag tcgacacatc gcttgtagtt
     4201 ggcatcgacc tcggccttgg tctcgtacgg cgtctggacc cagccgtgca cggcggcatc
     4261 aactcgctcc atggccaggt tggcaccctt gacgagccgc accttcacct cgccacccct
     4321 agtgtcgtgg cgggccgagg cccaggagct gatccgcttg agcgcaccga aggcgtcggg
     4381 caggtaggcc tgcagcacga tccccgcatc gaggtgccga agttcgggct cgtcgagcag
     4441 ctcggtgaac gcccggatgg tcagctcgag gtcacggtgc tcctccatat cgaggttcac
     4501 gaaggtaggc ctccccgacg gcgtgggggc caccgctgca cgctggtaca gcacccggag
     4561 gcgttcctca attcgggc
//
LOCUS       DASCMR010000344         2310 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001696399, whole genome shotgun sequence.
ACCESSION   DASCMR010000344 DASCMR010000000
VERSION     DASCMR010000344.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2310)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2310)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2310
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001696399"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..896
                     /locus_tag="QGG16_08165"
     CDS             <1..896
                     /locus_tag="QGG16_08165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="NADH-ubiquinone oxidoreductase-F iron-sulfur
                     binding region domain-containing protein"
                     /protein_id="HJP25287.1"
                     /translation="THAIAEAYAAGLLGADVAGSGIRFDLHLRNGAGAYICGEETALF
                     NSIEGFRGEPRNKPPFPTTHGLFGEPTAINNVETLVNVLPVVLMGGEAYAADGTERSP
                     GTKLFCLSGRVVRPGTYEVEFGATLRDLIELAGGLPDGRVLRTVMLGGAAGSFVGPES
                     LDMPLTLEDTRAAGASLGSGVIMVFDERDDMVDTVRRVAEFFRDESCGQCVPCRVGTV
                     RQEEVLVRLGRGSAIDDERDLLDDLATVMKDASICGLGQTASGAVRSAIDLGLLSGLG
                     TGAGADGSDGDKSGLDEGGIR"
     gene            893..1753
                     /locus_tag="QGG16_08170"
     CDS             893..1753
                     /locus_tag="QGG16_08170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HJP25288.1"
                     /translation="MNEVPVTVSTTVEFTLDGDAVRVPEGSTILDACRREGIDTPTLC
                     WAENLTPVNVCRVCVVEVEGSRVLVPSCSRPVEEGMVVSTDSDRVRTSRRMVYELLAS
                     SVEMDRADPEVHAWMVHYGARPERMGDRSEIATVAQPIKIQDDLYVRDYERCILCYKC
                     VEACGDDAQHTFAIATAGRGFDAHISTEHDVTLPDSACVYCGNCIGVCPTGALAFKTE
                     HDMREADTWDESAQQVTTTVCPFCGVGCNLELHTQDDRIVKVTSPADHSVTHGHLCIK
                     GRFGWQHAHA"
     gene            complement(1774..>2310)
                     /locus_tag="QGG16_08175"
     CDS             complement(1774..>2310)
                     /locus_tag="QGG16_08175"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013382.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HJP25289.1"
                     /translation="CAIALSSVMSPMTDWTDSDSTTGDPPLACRVLDVGCGTGLSGLA
                     LCDAGFTELDGCDFSSPMLRRAADTGVYRRLFEADLNEGLDVDDGTYDAAAAVGVFSF
                     GHIRPSALRDVLRVVRSGGAVVVGLNDHFWDEGDFPAELDAIEADGIATVAFREHGEH
                     LPGAGIDGWVVVLVKPKG"
BASE COUNT          386 a          721 c          807 g          396 t
ORIGIN      
        1 tcacccacgc catcgccgag gcttacgcgg ctgggttgct gggtgccgac gtggccggat
       61 cgggcatccg tttcgatctc cacctccgga acggggccgg tgcctacatc tgtggcgagg
      121 agacggccct gttcaactcc atcgaggggt tccggggcga gccccgtaat aagccgccat
      181 ttccgacgac ccacgggttg ttcggcgagc cgacggccat caacaacgtg gagacgctcg
      241 tcaatgtgtt gcccgtggtg ctcatgggcg gtgaggccta cgcagccgac ggcaccgagc
      301 gctccccggg caccaagttg ttctgcctca gcgggcgggt ggtccggcct ggcacctacg
      361 aggtggagtt cggtgccacg ttgcgtgacc tgatcgaact ggccggaggg ctacccgacg
      421 gccgtgtgtt acggaccgtc atgctgggag gggcggcggg cagtttcgtc ggccctgaat
      481 cgctcgacat gcctctgacg ctcgaggaca cgcgagcggc cggcgcttcg ttgggatccg
      541 gtgtgatcat ggtgttcgac gaaagggacg acatggtcga caccgtgcga cgcgttgccg
      601 agttcttccg cgacgagtcc tgtggccagt gcgtgccgtg ccgggtgggg acggttcgcc
      661 aagaggaagt gctggtgcgc ctcggtcgcg gatccgctat cgacgacgag cgcgatctgt
      721 tggacgacct ggcgaccgtg atgaaggacg cctcgatctg tggtctcgga cagacggcgt
      781 ccggggcggt tcgtagcgcc attgatctgg gcctgctgtc cggtctaggt actggcgcgg
      841 gggcggacgg ttcagacggc gacaagtcag gactcgacga ggggggcatc aggtgaacga
      901 ggttccggtg acggtgtcga cgacggtcga attcaccctt gacggtgacg cagtaagggt
      961 gcccgaaggc tccacgattc tcgacgcttg taggcgcgag ggcattgaca cgcccacgtt
     1021 gtgctgggcc gagaacctga cgccggtgaa cgtgtgccgg gtctgcgtgg tggaggtcga
     1081 gggctcgcga gtgctggtgc cgtcgtgttc gaggcccgtc gaggagggca tggtcgtgtc
     1141 caccgactcc gaccgggtcc gcaccagtcg ccgcatggtc tacgagctct tggcctcgtc
     1201 ggtcgagatg gaccgggccg atcccgaggt gcacgcgtgg atggtgcact acggcgctcg
     1261 cccggaacgc atgggggacc ggtccgagat cgccacagtg gcccagccca tcaagatcca
     1321 ggacgacctg tacgtgcggg actacgagcg gtgcatcctc tgttacaagt gcgtggaggc
     1381 gtgcggcgat gatgcccagc acaccttcgc aatcgccacg gccggtcggg gattcgacgc
     1441 ccacatctcg accgagcatg acgtgacgct gcccgactcg gcgtgcgtct attgcggcaa
     1501 ctgcatcggg gtgtgcccga ccggagcgct ggcattcaaa actgaacacg acatgcgcga
     1561 ggccgacacg tgggacgaat cggcccaaca ggtcacgacc accgtgtgcc cgttctgcgg
     1621 agtgggttgc aacctcgagt tgcacaccca agatgaccgc atcgtgaagg tcacctcgcc
     1681 ggccgaccat tcggtcaccc atggacacct gtgcatcaaa ggccggttcg gctggcagca
     1741 cgcccacgcc tgaacggggc ctgagtcctg ggctcagccc tttggcttga cgagcacgac
     1801 cacccagccg tcgatgccgg cgcccggcag gtgttcgccg tgctctcgga aggccaccgt
     1861 ggcgatcccg tcggcctcga tggcgtccag ttcggctggg aagtcgccct cgtcccagaa
     1921 gtggtcgtta aggccgacga ctactgcgcc acccgatcgg acgaccctca gcacgtcgcg
     1981 tagggccgat ggtcggatgt gaccgaagga gaacacgcct acggccgctg ctgcgtcgta
     2041 ggtcccgtcg tccacgtcga ggccttcgtt caggtcggcc tcgaacaacc gccggtagac
     2101 gccggtatcc gccgcccggc ggagcatggg tgaagagaag tcgcagccgt ccagctcggt
     2161 gaagccggca tcgcacaatg ccaggcccga cagtccggtg ccgcaaccca catccaggac
     2221 tcggcatgcc aagggcgggt cgcccgtggt ggagtcggag tcggtccagt cggtcatcgg
     2281 tgacatcacc gaagagagag cgatggcaca
//
LOCUS       DASCMR010000345         5083 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001711229, whole genome shotgun sequence.
ACCESSION   DASCMR010000345 DASCMR010000000
VERSION     DASCMR010000345.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5083)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5083)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5083
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001711229"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..541
                     /locus_tag="QGG16_08180"
     CDS             <1..541
                     /locus_tag="QGG16_08180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25290.1"
                     /translation="LHHFPFLTDDLRLETSNRLWVEGLYKGVVWEANTSLFYLGMQDQ
                     YYTFNMFDAQAWYARDVMMGRIDLPSAEEMAADGAAWLAREEALETAYEEIDFQGDYT
                     QVLVDETDYPDFNIPAVNQMFKDWKGHKKADIMGYRNLGFPSTLTGTVAPPHHTPWLD
                     ALDDSMATYLLDEAPDGGG"
     gene            complement(812..2152)
                     /locus_tag="QGG16_08185"
     CDS             complement(812..2152)
                     /locus_tag="QGG16_08185"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HJP25291.1"
                     /translation="MSTTGKLPESVRYCIIGAGIHGLSTAWHLARELKARGAGSGDDI
                     LIIEKSAAGAGPSGIACGVVRNNYFQPAMRELMAHSVEVWDANAEAFEYHPVGYLQIS
                     YDEMSEDVATIHEQQKAIGYESEFIDGVDATRDHMLGIFDDWRATGVSSVLHEKKGGY
                     AHNMATVNGLLAKVEAEGVNVVSDTVVTELAVNGGAVTHVVTSRGMVAVDHVVAAAGP
                     WVPKLWEMLDLPDTTDIVSGDSTHTVPTWKFWALQEGTLDVDPGYLMNNAGTMPPVVH
                     VDADAPLHDEDGNLLVDGKWGVYYKPDFNFGGVQGGYMPYPVDKPWRDVAIDPYGPAS
                     PDFVVGEDFRAVWAAALSHCQSRFEGKAHLMSQVPSGGIGAFTPDSFPVLDTFCENVY
                     VIADSNHGFKMIGLGALVAKELCGATQALLEPFRYSRYALGNLHPESNSPYPWS"
     gene            complement(2287..2709)
                     /locus_tag="QGG16_08190"
     CDS             complement(2287..2709)
                     /locus_tag="QGG16_08190"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25292.1"
                     /translation="MGVKHTVAIDAETLAGKRFDYQEDVSLVEDLDLMELTPGKDLNW
                     LEDIHLLEEDGTPAVFDRNSNAFLKIYFDIPEGRGDELARKVLMRHLISGNSYGIQLK
                     EKHCKFHQVELGPWVADSKSVGDNYKAPVLEGWEPPAH"
     gene            complement(2712..4148)
                     /locus_tag="QGG16_08195"
     CDS             complement(2712..4148)
                     /locus_tag="QGG16_08195"
                     /EC_number="1.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013784.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding glutamate synthase family protein"
                     /protein_id="HJP25293.1"
                     /translation="MPEANDIKGVDTPVVDTNAATDVIGKSKIFTPEVINDIHVKAEL
                     GRYRMRGFSLFKKIPHWDELVFLPGTLTRFVIEGYREKCETKTVIGGRFAAKPLELDI
                     PVYITGMSFGALSIEAKSALAKGASMAGTATCSGEGGMIPPERDLSTKWFYQVIQSRY
                     GFNPHHLMLADAIEFFIGQGCKVGLGGHLMGQKVTEQVAEMRSLPAGIDQRSPARHPD
                     WIGPDDLSLKIQEIREATNYQVPIQLKLGSSRVYDDVRMAAKCGPDSIYLDGAEGGTG
                     AGPHLATEETGIPLMAAIPEARRALEDVGLADEVDLVVAGGIRNGGDVAKCLALGAKA
                     VALGTAALMALNCNKHIEGVTDYEGTIGVPAGECYHCHTGRCPVGVATQDVELRARLD
                     VDEAALRVYNYLHTLTMEVQLLARACGKTDIHSLEPEDLAALTHEASAMAKVPLAGTT
                     YIPGVSEERALQEMKDMMAKQLAESGRN"
     gene            complement(4161..4943)
                     /locus_tag="QGG16_08200"
     CDS             complement(4161..4943)
                     /locus_tag="QGG16_08200"
                     /inference="COORDINATES: protein motif:HMM:NF013645.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25294.1"
                     /translation="MNTKSGVIYDARGLVEPDPEPPMTAEIDGDSAVIDATDLTTRKI
                     NLELKRIVYDEGVNTVTIVNPGSKHSLGVGILKRCNITFEGSPGWYACGLIDGPEVQI
                     NGRVGWSLGENMMSGSVVVEGPAGSLTGAALRGGDLVVKGNVGARTGIDQKGGTIIAL
                     GSAGINTGFMMQRGRQIICGNVNDGLGDSMYDGIIYVGGNVASLGVDCVPGEMNDDDV
                     EFINRKFEIYDLGTPPDLKKFECGKVLHNYDALEPSERKLVL"
BASE COUNT          909 a         1685 c         1515 g          974 t
ORIGIN      
        1 cctgcaccac ttcccgttcc tgaccgacga cctgcggctc gaaacgtcca accggctctg
       61 ggtcgagggc ctctacaagg gagtcgtctg ggaggcgaac accagcctct tctacctcgg
      121 gatgcaggac cagtactaca cattcaacat gttcgatgcg caggcctggt acgcccgcga
      181 cgtcatgatg ggacgcatcg atctgccgtc tgccgaggag atggctgccg acggtgctgc
      241 ctggctggcc cgcgaagagg cactcgagac ggcctacgaa gaaattgact tccagggcga
      301 ctacacccag gttctggtcg acgaaaccga ctacccggac ttcaatatcc cggcagtgaa
      361 ccagatgttt aaggactgga agggccacaa gaaggccgac atcatgggct accggaacct
      421 cggattcccg tcgacactga ccgggaccgt ggcgccgccc caccacacgc cgtggctgga
      481 tgcgctagac gactcgatgg ccacctacct gctagacgag gccccggacg gcggcggctg
      541 agaggccgac acccttcgag atcggttcac cgctcagccc ccatcaggct tagaggccgc
      601 ccttccctgc cttcttgtct ttctttgcct gtcgcttttc tttagcgctc ttggaggcgg
      661 gagtcttgct gctccggcca cccttgtctt tactagccat agcggactct ccaactttct
      721 gttgacctct tgacccagac cgaccttagg ctcccggctc gctgcaaaac tcaaaacgac
      781 caccgcccca gagagaatga agcgactggc cctaactcca gggatacggc gagttgctct
      841 ccggatgcag attgcccaag gcgtaccggc tgtaccggaa cggctccaac agggcctgcg
      901 tggcgccgca gagttccttg gccaccagtg cgcccaaccc gatcatcttg aagccgtggt
      961 tcgagtcagc gatcacgtag acgttctcac agaaggtgtc cagcactgga aagctatccg
     1021 gggtgaacgc cccgatcccg ccggatggca cctgactcat caggtgggcc ttgccctcga
     1081 accgtgactg gcagtgcgac aacgcagcgg cccacacagc ccggaagtct tcgccgacca
     1141 cgaagtccgg actggctggg ccgtaaggat cgatggccac gtcacgccat ggcttgtcga
     1201 ccgggtaggg catatagccg ccctgcaccc caccgaagtt gaagtcgggc ttgtagtaca
     1261 cgccccactt gccatctacc aacaggttcc catcctcgtc atgcaggggt gcgtcggcat
     1321 ccacatggac gaccggcggc atagtcccgg cgttgttcat caggtaaccg ggatcgacgt
     1381 ccagcgtccc ctcttggagg gcccagaact tccaggtcgg cacggtgtgg gtggaatcgc
     1441 cggacacgat gtcggtggtg tcaggcaggt ccagcatttc ccacaacttc ggtacccacg
     1501 gccccgcggc ggcgaccaca tggtcgacgg cgaccatgcc ccggctggtc accacgtgcg
     1561 tcacggcacc accgttgacg gctagttcgg tgaccacggt gtcggacacg acattgacgc
     1621 cttcggcctc caccttggcc agcagtccgt tgacggtggc catgttgtgg gcgtagccgc
     1681 ccttcttctc gtgcaacacg ctgctaacac cggtggcacg ccagtcgtcg aagatgccca
     1741 gcatgtggtc gcgggtggca tcaacaccgt cgatgaactc cgactcgtat ccaatggcct
     1801 tctgctgctc gtggattgtc gccacgtcct cgctcatctc gtcatacgaa atctggaggt
     1861 agccgaccgg gtgatactcg aaggcctcag cattggcgtc ccacacctcg accgaatgag
     1921 ccatcagctc gcgcatggcg ggctggaaat aattgtttcg aaccacgccg caggcgatgc
     1981 ccgacggacc ggcacccgcc gcggacttct caatgatgag gatgtcgtca ccactgccgg
     2041 cgccacgggc cttcaactcg cgggccaggt gccaagcagt ggacaggccg tggataccgg
     2101 caccgataat gcagtaccgg accgactcgg gaagcttgcc ggtggtgctc atggggtact
     2161 cctgttgctt gggtgccacc gagtcagcgg caccgatcca tcacgggtcg gacatgaccg
     2221 gacccgccga caggtgtcga cgggtccgaa tcagagattt tcttcggtga tcgtcccgcc
     2281 ggcgagctag tgggccggcg gctcccagcc ttcgagaacc ggcgccttgt agttgtcgcc
     2341 caccgacttt gagtcggcga cccacgggcc gagctccacc tggtggaact tgcagtgctt
     2401 ctccttgagc tggatgccgt aggagttccc cgagatgagg tgtctcatga gcaccttgcg
     2461 ggccaactcg tccccccgac cttccgggat gtcgaagtaa atcttcagga aggcgttgga
     2521 gttccgatca aacaccgcgg gggtgccgtc ctcctccagt aggtggatgt cctccaacca
     2581 gttcagatcc ttccccggcg tcaactccat caggtcaagg tcctctacca gcgagacgtc
     2641 ctcctggtaa tcaaaccgct tcccggccag ggtctcggca tcgatggcga ccgtgtgctt
     2701 cacacccatc gtcagttcct cccgctctct gcgagctgct tggccatcat gtccttcatc
     2761 tcctgaagcg cacgctcctc actgactccc gggatgtagg tggtccccgc cagcggcacc
     2821 ttggccatgg ccgacgcctc atgggtgaga gcagccagat cctcaggctc gaggctgtgg
     2881 atgtcggtct tgccgcaggc acgggccagc aactggacct ccatggtcaa tgtatggagg
     2941 tagttgtaga cccgcagggc ggcctcgtcg acgtcaaggc gtgcccgcag ctcgacgtcc
     3001 tgggtggcca cacccactgg acagcgaccg gtgtggcagt ggtagcactc gccggcaggc
     3061 actccgatgg tgccctcata gtcagtgaca ccctcgatgt gcttgttgca gttcagggcc
     3121 atcagggcag cggtaccgag tgccactgcc ttagcgccca gagccaggca cttggccacg
     3181 tcaccaccgt tgcggatgcc gccggccacc acgaggtcga cctcatcggc caggcccacg
     3241 tcctcgagcg cccgccgagc ctcggggatg gcggccatca acgggatgcc cgtctcctcg
     3301 gtggcgaggt gtggaccagc accggtacct ccttcggcgc catcgagata gatcgagtca
     3361 ggaccgcact tggcggccat ccgtacgtcg tcgtacaccc gtgacgaacc caacttcaac
     3421 tggatcggta cctggtagtt ggtggcctca cggatctcct ggatcttcag cgacaagtcg
     3481 tcaggcccaa tccagtcggg gtggcgagcc ggagagcgct ggtcgatgcc agcgggcagc
     3541 gatcgcatct cggccacctg ctcggtgacc ttctggccca tgaggtgtcc accaaggccg
     3601 accttgcaac cctgtccaat gaagaactcg atcgcgtcgg ccagcatcag gtggtgcggg
     3661 ttgaagccgt aacggctctg gatgacctga tagaaccact tcgtcgacag gtcccgctcg
     3721 ggcggaatca tgccgccctc accggagcat gtcgccgtgc cggccatcga ggcgcccttg
     3781 gcgagtgccg atttggcctc gatagacaac gcaccgaagc tcatgccggt gatgtagacg
     3841 ggaatgtcca actccaacgg cttggcggca aaccggccgc cgatgaccgt cttggtctcg
     3901 cacttctcgc gatagccctc gatcacgaag cgggtgagcg ttccaggaag gaacaccaac
     3961 tcgtcccagt gtgggatctt cttgaatagt gagaatcccc gcatccgata gcggcccagt
     4021 tcagccttca cgtggatgtc gttgatgacc tccggcgtga agatcttgct cttgccgatg
     4081 acgtcggtgg cggcgttggt gtccaccacc ggcgtgtcca cgcccttgat gtcgttcgct
     4141 tctggcatcg cctgtccctc ctagagaacg agtttgcgct cggaaggctc cagcgcgtcg
     4201 tagttgtgga gcaccttgcc gcactcgaac ttcttcaggt ccggcggggt accgaggtcg
     4261 tagatctcga acttccggtt gatgaactcg acgtcatcgt cgttcatctc gccgggcacg
     4321 cagtccacgc cgagcgaggc cacgttcccg ccgacgtaga tgatgccgtc gtacatcgag
     4381 tcgcccaggc cgtcgttgac gttcccgcag atgatctggc gaccacgctg catcatgaag
     4441 ccggtgttga tgccggcgct gcccagagcg atgatcgtcc cgcccttctg gtcaatgccc
     4501 gtccgggcgc cgacgttgcc cttcacgacc aggtctccac cgcgcagggc ggctccggtg
     4561 agcgagcccg ccgggccttc gaccacgacc gatccggaca tcatgttctc gcccagcgac
     4621 cagccgaccc ggccgttgat ctggacctca ggtccgtcga tcaggccaca ggcgtaccag
     4681 ccggggctgc cctcgaacgt gatgttgcaa cgcttgagga tgccgacgcc gagggagtgc
     4741 ttggagccgg ggttcacgat ggtgacggtg ttgacaccct cgtcgtagac gatccgcttg
     4801 agttccaggt tgatcttcct ggtggtcaga tcggtagcgt cgatgacggc gctgtcgccg
     4861 tcgatctcag cggtcatcgg cggctcagga tccggctcga ccagaccccg ggcgtcgtag
     4921 ataaccccac tcttggtgtt catgcctgcc acgtcaggac ctcccgctcg aacggatcgc
     4981 ggctctcgac ctcacgaccc atcagcgccc ggatcgccat ctcctcggag gccatgacga
     5041 ccaggtcgtc ggtctccatg agcaccagcg gcttggccgc cat
//
LOCUS       DASCMR010000346         2291 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001715580, whole genome shotgun sequence.
ACCESSION   DASCMR010000346 DASCMR010000000
VERSION     DASCMR010000346.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2291)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2291)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2291
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001715580"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            69..428
                     /locus_tag="QGG16_08205"
     CDS             69..428
                     /locus_tag="QGG16_08205"
                     /inference="COORDINATES: protein motif:HMM:NF012301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HJP25295.1"
                     /translation="MTVSVVICDDDPQIRDMWADWLELLRDIDVVGRAASGEEAISFI
                     LEKQPTFAMVDRSMPPGDGITAIRAVRAGGYRGPIVVVSGEDGEEAGETDLTDVHYVS
                     KASGPSALATFLDGMGW"
     gene            425..1567
                     /locus_tag="QGG16_08210"
     CDS             425..1567
                     /locus_tag="QGG16_08210"
                     /inference="COORDINATES: protein motif:HMM:TIGR00229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HJP25296.1"
                     /translation="MNSEKDTLSATNSELRAGDHNARYLYETALGALPTGVIHLSADG
                     AFLGATSAMERMLGHPPGWEPPEGGLLELVHPDDQEVGVAALARLAGDPALEPWDSTT
                     DSVDLRVRNVDGDYRWLEARGTDLRQDPQVAGYLVSFTDVTSRVEATQYRSQFFRTAA
                     HELRAPVATMLGRLDILEATLEKVKADLPTTVPATVEHLRSSALRMQRLVGDLMDSAR
                     MDSGEFNLVRRDNVDLAALITKEIADLAVEAAERNVTITKRVTPGPKVTVDPVRISQV
                     IANLLSNACRYGKNGGAVMVTADPTRDGWCIRLVDTGIGMDAETVARLGEPLFRSERA
                     KEHSVGTGLGFAVTKGIVEAHGGTLTVESELDRGTTVTVLLPYDAD"
     gene            complement(1647..>2291)
                     /locus_tag="QGG16_08215"
     CDS             complement(1647..>2291)
                     /locus_tag="QGG16_08215"
                     /inference="COORDINATES: protein motif:HMM:NF012301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HJP25297.1"
                     /translation="DHPLLATAVSMELQARGNVACQIVHTGEEALAEYVAADQSETAA
                     DAFDLVLSDMDLDEEPGSQAMSGIDVTRKLLEYDPEAKVVILTASHDRGHIVQANLAG
                     AVGYITKDSIGDGQSLTTSVLRALRGERVYTAEIASVLIADSHGESAGPNLTDRELQV
                     LQLVAQGLQFKEIASELLLSTHTVRDYARSLFAKLDVNDRAGAVAVGFQTGLLT"
BASE COUNT          442 a          662 c          742 g          445 t
ORIGIN      
        1 gccgtgacgg tgcaaaccct tcaaaccagg gggtgccaac cacacgttcg aaggcagggt
       61 ttacgaccat gacagtttcc gtggtcatct gcgatgacga tcctcagatc cgcgacatgt
      121 gggccgactg gctggaactg ctccgagaca tcgacgtggt aggccgggcc gcttccggcg
      181 aggaggcgat cagctttatc ctcgagaagc aacccacgtt tgccatggtc gaccgttcca
      241 tgcctcctgg cgacggcata acggcaatcc gcgctgtgcg ggccggcggc tacagggggc
      301 cgattgttgt cgtgtccggt gaggacggtg aagaggccgg tgaaacggac ctcacggacg
      361 tccactacgt gtccaaggcg tcaggtccga gtgcgctggc gacctttcta gatgggatgg
      421 gctggtgaac tccgaaaagg acaccttgtc ggcgaccaat agtgagttgc gggccggaga
      481 ccacaacgcc cgctacctgt acgaaactgc cctgggagca ttaccgactg gggtgatcca
      541 cctatccgcc gacggggcgt tcctgggtgc cacatcggcg atggaacgca tgctgggcca
      601 tcctcccggc tgggaaccac ccgagggtgg tcttttggag ttggtacacc cagacgacca
      661 ggaggtcggc gttgcagcgc tggcgcgcct ggctggggac cctgctctcg aaccgtggga
      721 ttcaacaacg gactcggtgg acctgcgggt gcgaaacgtg gacggcgact accggtggct
      781 cgaggcacgc ggaacggacc tgagacagga cccgcaggta gctggttatc tcgtgtcgtt
      841 caccgatgtg acgtctcgtg tggaggccac gcagtaccgc agccagtttt ttcgcactgc
      901 cgcccacgag ttacgagctc cggtcgccac gatgctgggg cgactcgaca tccttgaggc
      961 gacattagag aaggtcaagg cagaccttcc gacgacggtt ccagctaccg ttgagcacct
     1021 tcgctcatcg gctctgcgta tgcagcgcct ggtcggcgac ctcatggact cagcccggat
     1081 ggattccggc gagttcaacc tggtgcgtcg tgacaacgtc gacctggctg ccttgatcac
     1141 caaagagata gctgacctgg cggtcgaagc agccgagcgc aacgtaacga tcaccaagcg
     1201 ggtcacccct ggcccgaagg tgactgtcga cccggtccgg atcagccagg taatagcaaa
     1261 cttgctgtcc aacgcatgtc gttacgggaa gaacggtggg gcggtgatgg tgacagctga
     1321 tccgacgaga gacggctggt gtatccgcct tgtagacaca ggcatcggca tggacgctga
     1381 aactgtggcc cgactaggtg agccgctgtt tcgttcggaa agagctaagg agcactcggt
     1441 cggcaccggt ctcgggttcg ctgtgacgaa agggatcgtc gaagcgcacg gtggaacgct
     1501 cacggttgaa tctgagttgg atcgcggcac gacggtgacg gtccttctgc catacgacgc
     1561 tgactagggg atgctgcagc tacatggcag cactctttgc gaaagctgga cgtatttcgc
     1621 taacggggtg gctgccgcta ggcgggttag gtgagtagcc ctgtctggaa accgactgct
     1681 acagcaccag cgcggtcgtt cacgtcgagc ttcgcgaaca gcgatctcgc gtagtcgcgg
     1741 acggtgtgtg tagataggag aagttctgag gcgatttcct tgaactgcaa accttgagcg
     1801 accaactgta gaacttggag ttctctgtcg gtgaggttcg gaccggccga ctcgccgtga
     1861 gagtcagcga tcaagaccga agcgatctca gcggtataga ccctctcacc cctcaacgcg
     1921 cgcagcaccg aagtggtaag cgactggcca tcaccgattg agtccttcgt gatgtagcca
     1981 accgcgccgg ccaggttggc ctgaacaatg tggcccctgt cgtggctggc cgtcaaaatg
     2041 accaccttgg cttccgggtc gtactcgagg agcttgcggg tcacgtctat gccgctcatg
     2101 gcctggctgc cgggttcctc gtcgaggtcc atgtcgctca acaccaggtc gaacgcgtct
     2161 gcggctgtct cggactggtc ggcagctacg tactcggcca gagcttcctc accggtgtgc
     2221 actatctggc aggcaacgtt tcctcgagcc tggagttcca tggaaactgc ggtggccagc
     2281 agcgggtggt c
//
LOCUS       DASCMR010000347         8123 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001716830, whole genome shotgun sequence.
ACCESSION   DASCMR010000347 DASCMR010000000
VERSION     DASCMR010000347.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 8123)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8123)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8123
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001716830"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(71..865)
                     /locus_tag="QGG16_08220"
     CDS             complement(71..865)
                     /locus_tag="QGG16_08220"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJP25298.1"
                     /translation="MSNPVLAEKAVVVDGVDKVFNVGSDSEVEALSDINLTVEAGEFI
                     SLIGPSGCGKSTLLRLIGDLLAPTTGALTVFGKSAHEARLNQDYGMVFQHSGLFDWRR
                     VLANIELPLELRGWSKADRSARSAEMLGLVRLEDFGGHYPRQLSGGMQQRVSIARALS
                     FQPKLLLMDEPFGALDEMTREHMQLELLRIWRETHTTVVFVTHSVPESAFLSNRVVVL
                     SPRPGRIHSVVDVDLGERSDDTRQDPAFFAKATEIREALRAVESGG"
     gene            complement(862..1731)
                     /locus_tag="QGG16_08225"
     CDS             complement(862..1731)
                     /locus_tag="QGG16_08225"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HJP25299.1"
                     /translation="MARGGKWLRVATTVLAAVVLLFGIWEGYKWVGQQTGDYWPGTSI
                     ELPASTDDLTMPHAMDIANELFEEVRDGRARLPLFLFLLKKGWFTLQEAAIGFTLGLT
                     VGLGLAILMLRWRVAERGLLPWINVSQTIPLIALAPIIVTWGRQQDLPDMLSISLIAA
                     YLTFFPVAVSALRGLQSPDSAHVELMRSYAAPWRTTLVKLRLPAARAYLFPALKIAAT
                     LSVVGAIVGEISIGTKTGLGRAILEYAQRYAVSPERLYASVIGAAVLGLLVFGLVSLA
                     EWIVVRRTGEVTS"
     gene            complement(1824..2726)
                     /locus_tag="QGG16_08230"
     CDS             complement(1824..2726)
                     /locus_tag="QGG16_08230"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015411.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HJP25300.1"
                     /translation="MRVACLGLGRMGWHIAGHLADHSDAHDLAVFDVVDGLTGRWVEE
                     HNGTEADSVESAVTGAEFIVTSLPSDRELAEVATEVLPAIAEGAIWIDHSTTSAQIAC
                     ELGSGMSAVGGHFLDGPVSGGVDGARRGALSVMVGGDESAFARVEPLVEIYASRVRHM
                     GPVGAGQLTKMTNQICVVGLCQALAEGLDFASRAGLDVENVVEAMLQGSSTSWQMENR
                     ADKMLAGEYDFGFSTALMRKDIGLVLEEAASMGVSLPITALVGQFLADVDAMGGTTWD
                     WCSLMERQRRFAPANLPPNNADGR"
     gene            complement(2723..3316)
                     /locus_tag="QGG16_08235"
     CDS             complement(2723..3316)
                     /locus_tag="QGG16_08235"
                     /inference="COORDINATES: protein motif:HMM:NF018399.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid synthesis family protein"
                     /protein_id="HJP25301.1"
                     /translation="MTTLLFRQRKIHVVVEETRHDFGPSPSRPALKGAAAAVVSNPFV
                     GGYVADLSPAEEELRDLGHQLGELLVGHLGGDPHAIDSYGKGAIVGAAGEIEHGAMWH
                     IPGGGGMRAALGKGEAIVPSTKKVGPLGARLDVPLTHLEWSYVGSHYDAIEVGVPDAP
                     RPDELVLILAMAIGGRINARLAGGFTLDDRGQPGVPA"
     gene            complement(3383..4372)
                     /locus_tag="QGG16_08240"
     CDS             complement(3383..4372)
                     /locus_tag="QGG16_08240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03842 family LLM class F420-dependent
                     oxidoreductase"
                     /protein_id="HJP25302.1"
                     /translation="MVLQTDPPAWRVVELARQAETLGFTHAYTFDSHVLWQEPFVIYS
                     AMLAATKKMVVGPMVTNPGTRDWTVIASLFATLNDMYGERTVCAIGRGDSAMRVIGRK
                     PCNLATLEESMGVIKGLAEGGTAEYNGTTQTFPWRNGGSLPMWMAAYGPKALDLCGRK
                     ADGFVLQLADPQIAEWTIAAVKQAAADAGRDPESLTITVVAPAYVGDDLAHQRDQVRW
                     FGGMVGNHVADLVGRYGADGSAVPQALTEYIEGRKGYDYTEHGRAGNEHTDFVPDEVI
                     DRFCILGDENAHIARLRELESLGVDQFAIYLMHDQKDETLDAYGRKIIPALAR"
     gene            complement(4401..5888)
                     /locus_tag="QGG16_08245"
     CDS             complement(4401..5888)
                     /locus_tag="QGG16_08245"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018478 - malonate-semialdehyde
                     dehydrogenase (acetylating) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HJP25303.1"
                     /translation="MNEIQHLIDGVASPSTSGNDGPIFDPATGQQTGTVALASVAEVD
                     AAVASARSAFDGWSEVSLARRTKLMYEFRNLLVANADGVAARLSAEHGKVLDDARGEV
                     ARGIENVEFACGIADALKGLHSEGASTGVDVYTVRRPLGVVAGITPFNFPAMVPMWMF
                     PNAIACGNTFVLKPSERDPSAPLFIAELFQEAGFPPGVLNVVNGDKVAVDRLVEHPDV
                     KAVSFVGSTPIARYVYASATANGKRAQAMGGAKNHMIVLPDADLEMAADAAVSAAYGS
                     AGERCMAISVVVAVGDAGDRLVEAIRVRMEKLVIGPGTDPASEMGPLITREARDRVAG
                     YIQAGADAGCRVVVDGRDQVFDGDGFFLGVSLLDHVTTDMSVYTDEIFGPVLSVVRAD
                     SYAEGAQMIRDNPFGNGAAIFTRDGGAARQFQQDADAGMVGINVPIPVPVGYHSFGGW
                     NDSAFGDHTIYGPEGLRFYTRPKVITSRWPDPSTSGVDLGFPRND"
     gene            complement(5956..7368)
                     /gene="hydA"
                     /locus_tag="QGG16_08250"
     CDS             complement(5956..7368)
                     /gene="hydA"
                     /locus_tag="QGG16_08250"
                     /EC_number="3.5.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004157 - dihydropyrimidinase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropyrimidinase"
                     /protein_id="HJP25304.1"
                     /translation="MTTLIKNGTVVSATGRHAAEVLVDGTTIAAVLQPGSTMAVSAES
                     GADRVVDATGKFVVPGGIDCHTHMELPFGGTFASDTFEIGTRAAAWGGTTTIIDFAVQ
                     KTGENVRDSLEAWQAKADGQCAVDYAFHMILGGVDDAALKEMDALVDEGITSFKLFMA
                     YPGVFYSDDGQILRAMQKAANNGALITMHAENGIAIDVLAEQAAARGQTDPVYHGITR
                     PSRMEGEATNRAIQLALVAGAPVYFVHLSASEALERVAEARDAGHNVFAETCPQYLYL
                     NLEDHLGAPGFAGAGYVCSPPLRTKEHTHHKDLWRGLRTNDLAIVATDHCPFCMKDQK
                     ELGKDDFRAIPNGIGGVEHRMDLIYQGVAMGELSLERWVETCSTTPARMFGIYPQKGV
                     IAPGSDADIVLYDPEARTEISVDTHHMSMDYSAYEGYSIDGKVDTVMSKGRILIEDGE
                     YHGAKGHGAYLRRGLSTYLQ"
     gene            complement(7416..>8123)
                     /locus_tag="QGG16_08255"
     CDS             complement(7416..>8123)
                     /locus_tag="QGG16_08255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HJP25305.1"
                     /translation="QVFDMMTSGDVAAMIAEPIQGVGGFATPPDGFFAPIKKELENRG
                     VLFISDEVQTGWGRTGQHFWGYQAHGITPDILTFAKGVGNGLSLGGVIAGAELMDSLP
                     GNSISTFGGNPMSSVGALATIRYMLEHDIQGHALRMGERLVGHLQPAVDASDVVVELR
                     GRGLMLAIETVQPGTIEPNGDAAGRIMEQARNAGLLVGKGGLYGNVIRIAPPMTVTEA
                     EIDEAGTTLAGIIERLG"
BASE COUNT         1521 a         2648 c         2489 g         1465 t
ORIGIN      
        1 agaagaccga ccgcacccac cgtgatcggc ggccctagga cggaaatccg gccgcgaact
       61 cgccgaacca tcacccgccg ctctctacgg cccggagcgc ttcgcggatc tcagtggcct
      121 tcgcgaagaa ggctgggtct tgccgcgtat cgtcgctgcg ctcacctagg tcaacgtcaa
      181 ctacagagtg gatacgaccg ggccgtggcg acaagaccac tactcggttg gaaagaaaag
      241 ccgactcggg taccgagtgg gtgacaaata ccacggtggt atgggtttcc cgccatatcc
      301 gaagtagttc aagctgcatg tgctcgcggg tcatctcatc gagcgccccg aaaggctcgt
      361 ccattagtaa caacttcggc tgaaacgaga gcgcccgggc aatagacacc cgttgttgca
      421 tgccgccgct gagttggcgg ggatagtgcc caccgaagtc ttcaagcctt accaacccga
      481 gcatctctgc cgatcgggct gacctgtcag ctttcgacca gccacgaagt tcgagtggca
      541 gctcgatgtt ggccagcacc cgacgccaat cgaatagacc ggaatgctgg aacaccatgc
      601 cgtagtcctg attcaggcga gcctcgtggg ctgatttgcc aaataccgtc aacgctcccg
      661 tggttggggc gagtaggtcg ccaatcaggc gcagaagagt cgacttgccg caacccgagg
      721 ggccaatcag cgatatgaac tccccggcct caacggtcag gttgatgtca gacaacgcct
      781 ctacctcgga atcgctcccg acgttaaaga ccttgtcgac cccatctacg acaaccgctt
      841 tttctgccag aactgggtta ctcatgatgt gacctcaccg gtgcgtcgca ccacgatcca
      901 ttcggccagg gagaccagtc caaaaaccaa gaggccaaga accgctgcac caatcacgga
      961 cgcgtagagc cgctcaggcg agacggcgta gcgctgcgcg tattcaagga tcgcccgtcc
     1021 cagaccggtc ttggtgccga tggagatctc accaacgatg gccccaacaa cgctgagcgt
     1081 tgctgcaatc ttcaatgcag gaaacagata ggcacgtgca gcaggaagcc tcagtttgac
     1141 gagggtggtc cgccagggcg ctgcgtagga acgcatgagc tccacatggg cagaatcggg
     1201 ggactgcagg ccccgaagag cgctgacggc aaccgggaag aaagttaggt aggcagcgat
     1261 cagtgagatc gagagcatgt cgggtaggtc ctgctggcgc ccccaggtca cgatgatcgg
     1321 tgctaacgcg atcagtggaa tcgtctggga cacgttgatc cacggcagca gcccgcgttc
     1381 ggcaacccgc caacggagca tgaggatggc cagaccgagg ccgactgtca gaccaagggt
     1441 gaacccgatg gccgcctcct gaagggtgaa ccaacccttc ttcagcagga ataggaacag
     1501 cggcaaacgg gcccggccat ctcgaacctc ttcgaacagt tcgttagcga tgtccattgc
     1561 gtggggcatg gtgaggtcat cggttgacgc tgggagctcg attgaagtgc cgggccagta
     1621 gtcaccggtc tgttgaccaa cccacttgta gccctcccat atgccgaata ggaggacgac
     1681 tgcggcaagc acggtcgtgg ccacacgaag ccactttccg ccgcgtgcca ttaggcaacc
     1741 ggaccggggc tcaagggact ctcatttcga aaggtcctgc agtcgctgcg cccgaaatgt
     1801 tcttgggcgt catgacacat cgttcaacgg ccatctgcat tgttcggtgg cagattcgcg
     1861 ggggcgaatc gccgttgtct ctccatcaag ctgcaccagt cccaagtggt tccccccatg
     1921 gcgtccacat cagccaggaa ctggcccacc aatgcggtga tcggaagtga aacacccatg
     1981 gaagcggcct cctcgagaac aagtcctatg tcctttcgca tcagcgcggt ggagaagcca
     2041 aagtcgtatt caccggccag catcttgtcg gcccgatttt ccatctgcca ggaagttgag
     2101 gaaccttgca acatcgcctc gaccacattt tcgacatcga gtccagcccg agaggcaaag
     2161 tccagacctt cggcaagtgc ctgacataac ccgaccacac agatctgatt cgtcatcttg
     2221 gtcagttggc ctgcgccaac cggacccatg tgtcgtaccc gagaggcgta gatctctact
     2281 aagggctcaa ctctggcaaa tgcgctttca tcaccaccaa ccatgaccga gagcgccccc
     2341 cggcgcgctc catcgacacc accggagaca ggcccgtcaa gaaagtggcc gccaaccgcg
     2401 gacatgccgc ttcctaactc gcaagcaatc tgggcagagg tcgtggagtg atcgatccag
     2461 attgcccctt cagcgatggc gggcagaacc tctgtcgcga cttccgccaa ctccctgtct
     2521 gacggcagcg aggtgacgat gaactccgca ccagtgactg ccgactccac tgagtcggcc
     2581 tccgtgccgt tgtgctcttc gacccaccgg cctgtaaggc catcgacgac atcgaaaacc
     2641 gctaaatcat gggcatcgct gtggtcggcc agatgtccag cgatgtgcca acccatgcgc
     2701 ccaaggccaa ggcacgcgac cctcatgccg gcacgccggg ttgaccccgg tcatccaggg
     2761 tgaaacctcc ggcaaggcgt gcatttatcc gtccaccaat tgccatggca aggatcagta
     2821 ccaactcatc cggccgtggt gcgtctggaa ctcctacttc gattgcgtcg taatggcttc
     2881 cgacgtaaga ccactcaaga tgggtaaggg ggacgtctag ccttgctccg agcggtccta
     2941 ctttcttggt ggacgggacg atggcctctc cctttccgag ggcagccctc atcccgccgc
     3001 caccagggat gtgccacatg gcgccgtgtt cgatctcccc cgctgccccg acgatcgctc
     3061 ctttgccata gctgtcaata gcgtgaggat cgccacctag atgcccaaca agcaactcac
     3121 ccaactgatg gcccaggtcg cgtagttcct cctcagcagg gctcagatcg gctacatagc
     3181 caccaacgaa tggattgctc acaacagcag cggcggcccc tttcaacgcg ggccgacttg
     3241 gtgacgggcc gaagtcgtgg cgggtttctt cgaccacgac atggatcttt ctttgcctaa
     3301 ataacaaggt ggtcacgctc tctcagttgt tgcgtccagg tcaggtcgga agcgattcgg
     3361 cttggagacg gtgctgaatc tgttaacggg ctagagccgg gataattttc cggccgtatg
     3421 cgtcaagggt ctcgtccttc tggtcgtgca ttaggtagat ggcgaactgg tccacgccga
     3481 ggctctcgag ttcgcggagc cgagcgatgt gggcattctc atcgccgagg atgcagaacc
     3541 ggtcgatcac ttcgtcgggt acgaagtcgg tgtgctcgtt gccggcccgg ccgtgttccg
     3601 tgtagtcgta gcccttccga ccctcgatgt attcggtcag agcctggggc accgccgacc
     3661 cgtcggcgcc gtaccggcca acgaggtcgg ctacgtggtt gccgaccatc cctccgaacc
     3721 aacgcacctg gtcgcgctgg tgggcgaggt catcgccgac gtaggccgga gcaaccacgg
     3781 tgatggtcag cgattcgggg tctcgcccgg catcggccgc ggcctgcttc acggcggcaa
     3841 tggtccactc ggcgatctgc gggtcggcca actggagtac aaagccgtcg gccttccggc
     3901 cgcagagatc aagcgccttc ggcccgtagg cggccatcca cataggtagc gagccgccat
     3961 tgcgccacgg gaaggtctga gtggtgccgt tgtactcggc ggtgccgccc tcggccaggc
     4021 ccttgatgac ccccatggac tcctcaaggg tggcgagatt gcagggcttg cgaccgatga
     4081 cccgcatggc tgaatcgccc cggccaatgg cgcacaccgt gcgctcgccg tacatgtcgt
     4141 tgagggtggc gaacagcgag gcgatgaccg tccagtcccg ggtgcccggg ttggtcacca
     4201 tggggccgac caccatcttc ttggtggctg ccagcatggc gctgtagatc acgaacggtt
     4261 cctgccacag gacgtgactg tcgaatgtgt acgcgtgggt gaacccgagg gtctcggctt
     4321 ggcgggccaa ctcgaccacg cgccatgccg gagggtccgt ctgcagaacc actccaaagt
     4381 ccattcgccc agccttcctt tcagtcgtta cgggggaagc cgaggtcgac gccgctggtc
     4441 gacgggtcgg gccaccgact ggtgatcacc ttgggtcggg tgtagaaccg cagcccctcc
     4501 ggcccgtaga tggtgtggtc gccgaacgcc gaatcgttcc accctccgaa cgagtggtag
     4561 ccgacaggca ccgggatggg cacgttgatg ccgaccattc cggcgtccgc gtcctgctgg
     4621 aactggcggg ccgccccacc gtcccgggtg aaaatggccg ccccgttccc aaaggggttg
     4681 tcgcggatca tctgggcacc ctcggcatac gagtcggccc gcaccaccga cagcaccgga
     4741 ccgaagatct cgtcggtgta gacgctcatg tcggtggtga cgtggtcaag cagcgacacg
     4801 ccgaggaaga aaccgtcgcc gtcaaatacc tggtcccgac cgtcgactac tacccgacag
     4861 ccggcatcgg cacccgcctg gatgtagccg gccacccggt cgcgagcctc ccgggtgatg
     4921 agcggaccca tctccgatgc agggtcggtc cccggaccga tgaccaactt ctccatacgg
     4981 acccggatgg cctcgactag ccggtccccc gcgtcgccaa cggcgacgac caccgagatg
     5041 gccatgcacc gctcgccggc cgacccgtag gccgccgaca ccgccgcatc ggccgccatc
     5101 tccaggtcgg cgtcgggaag cacgatcatg tggttcttgg ccccgcccat ggcctgagcc
     5161 cgcttgccgt tggcggtcgc cgaggcgtac acataccggg cgataggtgt ggacccgacg
     5221 aagctcaccg ccttcacatc aggatgctcg accaggcggt cgacagccac cttgtcgcca
     5281 ttgaccacgt tcaacacgcc aggggggaag cctgcttcct ggaagagctc ggcgatgaac
     5341 agaggtgctg agggatcacg ctcagatggc ttgaggacaa aagtgttccc acaggcaatg
     5401 gcgttgggga acatccacat ggggaccatg gccgggaagt tgaacggggt aatccctgcc
     5461 accaccccaa ggggccggcg cacggtgtag acgtccacac ctgtgctggc gccctcacta
     5521 tggaggccct tgagtgcatc ggcgatgccg caggcgaact caacgttctc gatgcctcgg
     5581 gccacctcgc cgcgggcgtc gtcgagcacc ttgccgtgct cggcagacaa ccgtgccgcc
     5641 accccgtcgg cgttggccac cagcaggttg cggaactcgt acatcaactt ggtgcggcgg
     5701 gccagtgaca cctcgctcca accatcaaag gcgctccggg ccgaggccac cgcggcatcc
     5761 acctcggcca ccgaggccag ggcgaccgtc ccggtctgtt gaccggtagc cggatcgaag
     5821 atcggaccgt cattgccgga cgtagacggc gacgcgaccc cgtcgatcag gtgctggatc
     5881 tcgttcatcg gtttctcctt caggggacgg accatccggg ccgccggaaa ctacgagggc
     5941 taccggaggt cggtgctact ggagataggt cgacaggccg cgtcggaggt aagccccgtg
     6001 acccttggcc ccgtggtact caccgtcctc gatcaggatc cgtcccttgg acatcaccgt
     6061 gtcgaccttg ccgtcgatcg aatacccctc ataggccgag tagtccatgc tcatgtgatg
     6121 ggtgtcgact gagatctcgg tcctggcctc cgggtcgtac agaacgatgt cggcgtccga
     6181 acccggcgcg atcacccctt tctgcggata gatgccaaac atgcgggccg gcgtggtcga
     6241 acacgtctcc acccaccgct ccagactcaa ctcacccatg gccacaccct ggtagatgag
     6301 gtccatccgg tgctccacgc cgccgatccc gttggggatg gcccggaagt cgtcctttcc
     6361 aagctccttc tggtccttca tgcagaacgg gcagtggtcg gtggccacga tggccaggtc
     6421 gttggtccgc agacccctcc acagatcctt gtgatgggtg tgttccttcg ttcgcagcgg
     6481 gggtgaacag acatagccgg caccagcgaa accgggagcc ccgaggtgat cctccagatt
     6541 caggtacagg tactgggggc atgtctcggc gaacacgttg tgtccggcat cgcgagcctc
     6601 ggccaccctc tcaagggcct cgctggccga gaggtggacg aagtagacgg gcgctccggc
     6661 taccaaggcc agttgaatgg cccgattggt ggcctcgccc tccatgcgag agggccgggt
     6721 gatgccgtgg tacacgggat cggtctgacc ccgggccgcg gcctgttcgg ccagcacgtc
     6781 aatggcgatg ccgttctcgg cgtgcatggt gatcagcgcg ccattgttgg ccgccttctg
     6841 catggcccgc aggatctggc catcatcgct gtagaagacg cccgggtagg ccatgaatag
     6901 cttgaagctg gtgatgccct cgtcgaccag ggcgtccatc tccttgagcg ccgcgtcgtc
     6961 gacgcctccc aagatcatgt ggaaggcgta gtccacggcg cactggccgt cggccttggc
     7021 ctgccacgcc tcgaggctgt cccgcacgtt ctcaccggtc ttctggacgg cgaagtcgat
     7081 gatggtggtg gtgccgcccc acgcggcggc ccgggtgccg atctcgaacg tgtcgctggc
     7141 gaacgtgcct ccgaacggga gctccatgtg ggtgtggcag tcaatcccgc cgggcaccac
     7201 gaacttcccg gtggcgtcca cgacccggtc ggcacccgac tcggccgaga cggccatggt
     7261 cgaccccggt tggagcacgg cggcgatcgt ggtcccgtcg accagcacct cggccgcgtg
     7321 gcgaccggtg gcactgacca ccgtgccgtt cttgatgagc gtcgtcattg gttccccctt
     7381 cgtgccgcca gcaggcggct ttcctgcccg gcccgtcagc ccaggcgttc gatgatcccg
     7441 gccagcgtgg tgcccgcctc gtcgatctcg gcctctgtca ccgtcatggg cggcgctatg
     7501 cgaatcacgt tgccatacag gccgcccttg cccaccaaca ggccggcgtt ccgagcctgc
     7561 tccatgatcc ggccggcggc gtcgccgttg ggctcgatgg tgcccggctg cacggtctcg
     7621 atggccagca tcaggcccct gcccctcaac tcgacaacca cgtctgaggc atcgaccgcg
     7681 ggttgcagat gcccgacgag acgctctccc atccgcagcg catggccctg gatgtcgtgt
     7741 tccagcatgt accggatcgt cgccagcgcc ccgacgctgc tcatcgggtt cccaccgaat
     7801 gtggagatcg agttgccggg cagcgagtcc atgagttcgg cgccggcgat cacaccgccg
     7861 agggacaggc cgttgccgac acctttggca aaggtgagga tgtcgggcgt gatcccgtgg
     7921 gcctggtagc cccagaagtg ctgaccggtg cggccccacc cggtctggac ctcgtcggag
     7981 atgaagagga cgccacggtt ctcgagttcc ttcttgatcg gagcgaagaa gccgtcgggg
     8041 ggcgtagcga aaccgccgac accctgaatg ggctcggcga tcatggcggc cacgtcgccc
     8101 gaggtcatca tgtcgaagac ctg
//
LOCUS       DASCMR010000348         6863 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001720766, whole genome shotgun sequence.
ACCESSION   DASCMR010000348 DASCMR010000000
VERSION     DASCMR010000348.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 6863)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6863)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6863
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001720766"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(230..314)
                     /locus_tag="QGG16_08260"
     tRNA            complement(230..314)
                     /locus_tag="QGG16_08260"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(278..280),aa:Tyr,seq:gta)
     gene            382..870
                     /locus_tag="QGG16_08265"
     CDS             382..870
                     /locus_tag="QGG16_08265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YajQ family cyclic di-GMP-binding protein"
                     /protein_id="HJP25306.1"
                     /translation="MPSFDVVSQVDLQEVRNAVDQASREVRTRFDFKGTESVIELQEG
                     AIKLESSTEDRLAALVVVLEEKLVRRNVSLKSLDWAEVEAASGARSRQLARLQAGIDS
                     EKAKGVNKAIKDLSLKGVQSQTQGDQVRVTAKKRDALQEVIAALKAADLGIPLQFENF
                     RD"
     gene            complement(908..1780)
                     /locus_tag="QGG16_08270"
     CDS             complement(908..1780)
                     /locus_tag="QGG16_08270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloprotease HtpX"
                     /protein_id="HJP25307.1"
                     /translation="MLNTAKTFVLLALLGGLFIAVGGAIGGSGGMAFGLILGLVMVGG
                     SYWFSDRIAIASAKAVPADETSHPEYHRIMRELSMAAEMPMPKLYVSPNPQPNAFATG
                     RNPDHAAVAVTEGLLAHMEWSEVRGVLAHELMHVRNRDILIGSVAATVGMAITMIARM
                     AMFAAMFGGGRDRDRNPIGEIAFAILAPVAAMLIQAAISRSREFQADASAARLIGDGE
                     PLARALEKLDLAAGRIPSGVDPNQASSYIIDPLKAQARGGARGGSKLFSTHPPTADRI
                     ARLRGGDWTNGPIS"
     gene            complement(1891..2388)
                     /locus_tag="QGG16_08275"
     CDS             complement(1891..2388)
                     /locus_tag="QGG16_08275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25308.1"
                     /translation="MLVVDVDGVLSDASGRQHLLGGGERQWAAFFEASVDDPPIVEGI
                     GLVRALADTGDGSSIDGVGVGVGVGVGVAGHPTVLLTARPSRLADTTMAWMGRHGIAW
                     DLLVMRADDDHRSSPDVKREAVADLRATGYEPVLAIEDDPRNAEMYRAEGVPVVYVHS
                     GYYDL"
     gene            complement(2449..4443)
                     /gene="acs"
                     /locus_tag="QGG16_08280"
     CDS             complement(2449..4443)
                     /gene="acs"
                     /locus_tag="QGG16_08280"
                     /EC_number="6.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003987 - acetate-CoA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0019427 - acetyl-CoA biosynthetic process
                     from acetate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
                     /protein_id="HJP25309.1"
                     /translation="MSEPTIEDYYVEDRTFPPSVEFTAAALLGDRSHHEEAAADYEAF
                     WARQARELLTWDQDFHTTLEWDLPFAKWFEGGTLNLTTNCLDRHVNAGLGDRIAYFWE
                     GEPGDTREITYADLLDEVCRFANVLKGLGLERGDRVAVYMPMIPELPVAMLACARIGV
                     AHSVIFGGFSPDSIVDRCEDAEARLVITADAGYRRGEPSALKVNVDAALTAGAPSVEH
                     VVVVNRCDTAVTMVDGRDLWWHELVADASSDCPAEPMDAEQLLYLLYTSGTTAKPKGI
                     MHTTGGYLTQVAYTHRYTFDVRPESDVYWCAADIGWVTGHSYIVYGPLANGCTSVMYE
                     GTPDTPRPEFRSGDRASWPRDRLWDIIERYGVTQLYTAPTAIRTFMKWGTAEPSDHDL
                     STLRVLGTVGEPINPEAWMWYHEHIGGGTCPIVDTWWQTETGGHMISPLPGVTTTKPG
                     SACQTIPGVFAELVDDAGQTVAQGGGYLTITHPWPSMLRGIWGDPERYADTYWSRFEG
                     RYFAGDGAKLDEDGYLWLLGRVDDVMNVSGHRISTTEVESALVDHPAVAEAAVVGATD
                     ETTGQAIVGYVILRGTYAASPELAEEVRGHVATKLGPIARPRAVVLVPDLPKTRSGKI
                     MRRLLRDVAEGRDLGDTTTLADSGVVDEIRTRAAEAPQED"
     gene            complement(4532..5632)
                     /locus_tag="QGG16_08285"
     CDS             complement(4532..5632)
                     /locus_tag="QGG16_08285"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF014673.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HJP25310.1"
                     /translation="MEISLGAQSLGDRLAESIRDDGPMAFSAWVEACLYDPDGGFYAA
                     GGSAGRRGDFLTSPEVGPLFGAVLARWMDTRWEALGRPNGFVVVEAAAGSGTLARAVV
                     AAEPACLTEGRYIMVERSAALRSVQPTDATFPGVCLSSVAHLADVGCISHGVVLANEL
                     LDNLAFGLLEVADGRWHEVLVDRESTGTTGEFREVLGDPVDLPAPVDAAACSPGARIP
                     VQAEAAVWVDTALGLLGVGSVLIVDYASTTSAMAARPPAEWLRTYRGHERGDVATNEP
                     GTQDVTVEVAVDQLPDGAVVATQAEFLGAHGIAELVDEGRRIWKTAAHLGDLTALRGR
                     SRVIESEALLDPSGLGGFTVLEWVRSSKVGSQ"
     gene            complement(5646..>6863)
                     /locus_tag="QGG16_08290"
     CDS             complement(5646..>6863)
                     /locus_tag="QGG16_08290"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit N"
                     /protein_id="HJP25311.1"
                     /translation="YVVVLLSTNYVAEGDYWENEYYGLLLASVMGMVMMASARDLVSI
                     FVALELLSIPAYLMAAWRKRDLHSTEAGLKYYLMGVFASAVMLYGMSLLYGVSGSTLL
                     SDIGTSMAAAGTSTAVVTMGIVFIVAGFAFKVSAVPFHTWAPDVYEGAPTPVTAFLAV
                     ASKAAGFVALLALVFVGFYSRSEVWEPLMWILAATSMTVGNLVALRQTNVVRLMAYSG
                     IAQTGFMIAPLAVAGHGLSNGDQALSAVVTYLAIYTAMNLGAFAVIIALSRKTGSAEV
                     SSFGGAFSYAPGLTVAMTIFLFSLAGIPPLGGWFAKFEVFRVLATAGEPWGYVLAAVG
                     AINSVIALYYYASLARRMWADDVPDGDHSPVLVTPSLVTALTLCGAVTLAFGVAPQLV
                     ARFTDVSLLALGG"
BASE COUNT         1254 a         2283 c         2297 g         1029 t
ORIGIN      
        1 ctccatgcca agcacggctt cgtcgaggtg ggtgtggaac gtcaggtggg tcgcaaattc
       61 aaccgatggg tcgatgtgac cgtcatgcag cttgtcttcg acgactgagc ttcctgcctt
      121 ccagatactg gccctctgaa tgcggtaaac gggtcttacc ggaacgggga acgggcccgc
      181 cggagcggac ccgtcaaccg ttccccgtac cgccgcctga gacgacggtt ggtgggccgg
      241 ggaggatttg aacctccgaa ggcaatgccg acgggtttac agcccgttcc ctttggccac
      301 tcgggcaccg acccagaaga tgtggaggat acccaccacc ggggcggtcc acgacgaccg
      361 ccgctgacta gcctgcgcgc catgccgagt ttcgacgtcg tctcccaggt tgacctacag
      421 gaggtccgta acgcggtgga ccaggcctct cgcgaggtac gcacccgctt cgacttcaag
      481 ggaaccgagt cggtgatcga acttcaggag ggcgccatca agttggagtc ctcgaccgag
      541 gaccgcctag ccgccctggt cgtagtgctc gaagagaaac tggtgcgtcg gaacgtctcg
      601 ctcaagtccc tggactgggc cgaggtcgaa gcagccagcg gggcccggtc ccgtcagctg
      661 gcccgactgc aggccggcat cgattcggag aaggccaagg gcgtgaacaa ggccatcaag
      721 gacctcagtc tcaagggcgt gcaatcccaa acccagggag accaggtccg ggtgacggcc
      781 aagaagcgtg acgccctcca ggaagtcata gcggccctaa aggccgcaga cctcggcatc
      841 cccctgcagt tcgagaactt ccgggactga tcagccgagg cgctgccgcg accagtcggg
      901 aaacgggtca ggaaatgggc ccgttggtcc agtcgccgcc acgcaggcgg gctatgcgat
      961 cagcggtcgg cggatgggtc gagaacaact ttgaaccacc acgtgcaccg ccacgagcct
     1021 gggccttgag cgggtcgatg atgtagctcg aggcctggtt cggatcgacg cccgacggga
     1081 tccggccggc agccaggtcc aacttctcga gcgcccgggc cagcggctcg ccgtcgccga
     1141 tcaaacgggc cgccgaggcg tcagcttgga attcccggct gcggctgatg gccgcctgga
     1201 tcagcatggc ggccaccggg gcgagaatgg caaaggcgat ctccccgatc gggttccgat
     1261 cccggtcacg cccaccaccg aacattgcgg cgaacatggc catgcgggcg atcatcgtga
     1321 tggccatgcc cacggtggca gccaccgagc caatcaggat gtcgcggttg cggacgtgca
     1381 tcagctcgtg ggccagcacg ccgcgtacct cgctccactc catgtgggcc agtaggccct
     1441 cggtcacagc gacggccgcg tggtcggggt tgcggccggt ggcgaaggcg ttgggctgtg
     1501 gattgggcga gacgtagagc ttgggcatgg gcatctccgc agccatcgag agctcgcgca
     1561 tgatgcggtg gtactcggga tgggaggtct cgtcggccgg caccgccttt gccgaggcaa
     1621 tggcgatccg gtcgctgaac cagtaggaac caccgaccat gaccagacca aggatgaggc
     1681 cgaaggccat gccaccactg ccgccgatgg cgccacctac cgcgatgaaa aggccgccca
     1741 gcagggccag caggacgaag gtcttggcgg tgttcagcaa cgaagggctc cgtatccgat
     1801 cggggagatc cagcgtagag gcgggcgtgg aagcgatcca cgcgcaccgg gccgaagatc
     1861 cagtgacctc cgcgtgtcgc aggtcccgga ctataggtcg tagtaccccg agtggacgta
     1921 gacgacaggc acaccttcgg cccggtacat ctcggcgtta cgcgggtcgt cctcaatcgc
     1981 tagaacgggc tcgtagccgg tggctctcag atcggccacc gcctcacgct tgacgtccgg
     2041 cgagctgcgg tggtcgtcgt cggcccgcat gaccaacagg tcccaggcaa tgccgtggcg
     2101 tcccatccac gccatggtgg tatcagccag ccgggacggg cgggcggtca gcaacacagt
     2161 ggggtgccca gcgacaccga caccgacacc gacaccgaca ccgacaccat cgatactgga
     2221 accatcgccg gtatcagcca acgcccgaac caagccgatc ccctcgacaa tcggcggatc
     2281 gtccacggaa gcctcgaaga acgccgccca ctgtcgctcg ccgccgccca gaaggtgctg
     2341 gcgtcccgag gcgtccgaca gcacgccgtc cacgtcgacg accagcaccg gcccgagggg
     2401 cggccctccg gccgagccgg gagggaggaa gcggaccggc gccgtggctc agtcctcctg
     2461 cggggcttca gcggcccggg ttcggatctc gtcgaccacg ccgctgtcgg ccagggtggt
     2521 ggtgtcgcct aggtccctcc cctcggccac gtctcgtagc aggcgccgca tgatcttgcc
     2581 gctacgagtc ttgggaaggt cgggcaccag caccacggcg cgggggcggg caatgggtcc
     2641 cagcttggtg gccacgtggc cccggacctc ctcggcgagt tccggtgacg cggcgtaggt
     2701 gcctcgcagg atgacgtagc cgacgatggc ctggccggtg gtctcatcgg tggcgcccac
     2761 cacggccgct tcggcgactg cgggatggtc gacgagagcc gactccacct cggtcgtcga
     2821 gatgcggtgc ccggacacgt tcatcacgtc gtcgacccgg ccgagcaacc acaggtaccc
     2881 atcttcgtcc agcttggcac cgtcgcccgc gaagtagcgg ccctcgaacc gggaccagta
     2941 ggtatcggcg tagcgctcgg gatcacccca gatgccccgc agcatcgatg gccacgggtg
     3001 cgtgatggtg aggtagcccc cgccctgggc caccgtctgg ccggcatcgt cgaccagttc
     3061 agcgaacacc ccgggaatgg tctggcacgc cgaccctggc ttggtggtgg tgaccccggg
     3121 tagcggcgag atcatgtggc cgccggtctc tgtctgccac caggtgtcga caatcgggca
     3181 tgtcccgccc ccgatgtgtt cgtggtacca catccacgct tcggggttta tgggttcacc
     3241 gaccgtgcca agcacccgca gcgtcgaaag gtcgtgatcg gacggctcgg ccgtccccca
     3301 cttcatgaac gtccggatgg ccgttggtgc cgtgtacagc tgcgtcacgc cgtaacgctc
     3361 gatgatgtcc cagaggcggt cccgaggcca cgaggcccgg tcgccggacc ggaactcagg
     3421 tcggggcgtg tccggggtgc cctcgtacat gaccgacgtg caaccgttag ccagcggtcc
     3481 gtaaacgatg tagctgtgcc cggtcaccca accgatgtcg gccgcacacc agtagacgtc
     3541 tgactcgggc cgcacgtcaa aggtgtagcg gtgggtgtag gccacctgag tgagataacc
     3601 cccggtggtg tgcatgatgc ccttgggctt ggcagtggtg cccgacgtgt acaacaggta
     3661 cagcagttgt tcggcgtcca tcggttcggc tgggcagtct gacgaggcat cggccacgag
     3721 ctcgtgccac cagaggtcgc gaccgtcgac catggtgacc gctgtgtcgc agcggttcac
     3781 caccacgacg tgctcgaccg acggggctcc ggcggtcagc gccgcgtcca cgttcacctt
     3841 cagggccgag ggctcgccgc ggcgatagcc ggcgtcggcg gtgatgacga gacgggcctc
     3901 ggcgtcctcg caacggtcca cgatcgagtc cggggagaaa ccgccgaaga tgacgctgtg
     3961 ggccaccccg atccgggcac atgccagcat ggctaccggc aactcaggga tcatcggcat
     4021 gtagacggcc acccggtcac cacgctcgag gccgagtccc ttgagcacat tggcgaaccg
     4081 gcagacctcg tcgagcaggt ccgcgtaggt gatttccctg gtgtcgcccg gctcgccttc
     4141 ccagaagtag gcaatgcggt cgccaagccc ggcattgacg tgacggtcca ggcagttggt
     4201 ggtcaggttg agggtgccac cctcgaacca cttggcgaac gggagatccc actccagggt
     4261 ggtgtggaag tcctgatccc aggtcagcag ttcacgggcc tggcgggccc agaacgcctc
     4321 gtagtcggca gccgcctcct cgtggtggga acgatcgccg agcagggctg cggcagtgaa
     4381 ttcgaccgag ggcgggaagg tgcggtcctc gacgtagtag tcctcgatcg tgggttcgct
     4441 catggccggg gtccccgatg gtcgtcgaat ggcgtgcggg accggaccct agccagcacc
     4501 gtcggtccgg gccgtggccc ggccccggtt cctattggga accaaccttt gaggaacgga
     4561 cccactccag caccgtaaag ccaccgaggc ccgatggatc aagcagtgcc tcagattcga
     4621 tcacccggct ccggccacgc agggccgtca ggtcacctag gtgggcggct gttttccaga
     4681 ttcgccgacc ctcgtcgacc agttcggcga tgccgtgggc gcccaggaac tctgcctggg
     4741 tggcaacgac ggcaccgtcg ggaagctggt cgacggccac ctccacggtc acgtcctgtg
     4801 tgccaggttc gttggtcgcg acatcgcccc gttcatggcc ccggtatgtc cgcagccact
     4861 cggccggtgg gcgggcggcc atggctgacg tcgtggacgc gtagtcgacg atcaagacgg
     4921 atccgacccc cagcagacca agggcggtgt ccacccagac agccgcctca gcctggaccg
     4981 gaatccgggc gcccgggctg cacgccgcgg catcaacggg cgccggtagg tcgacgggat
     5041 ctccaagcac ttcccggaac tcccctgtcg tacccgtcga ctccctgtca acgagcactt
     5101 catgccaccg gccgtccgct acctccagaa gcccgaaggc caggttgtcg agcaactcgt
     5161 tggccagcac caccccgtgg gagatgcacc ccacgtcagc cagatgggcc accgatgaca
     5221 ggcagacccc ggggaacgtg gcgtcggtcg gctggacgga gcggagggca gccgaccgct
     5281 ccaccattat gtatcggccc tccgtcagac aggccggttc ggccgccacc acggctcggg
     5341 ccagcgtgcc cgaccccgct gcggcctcga ccaccacgaa cccgttggga cggcccaagg
     5401 cctcccagcg ggtatccatc caacgggcca gaacggcgcc gaacaatggg ccgacctccg
     5461 gggaggtaag gaagtcgcca cggcgaccgg cgctcccgcc ggccgcgtag aagcccccgt
     5521 cagggtcgta caggcaggct tccacccagg cgctgaacgc catggggccg tcatcccgga
     5581 tggactcggc cagccggtca cccagcgact gggcacccag cgagatctcc acggcagtgg
     5641 gcgggtcagc ccccgagggc cagcaggctc acgtcggtga agcgggccac caactgaggg
     5701 gcgacgccaa aggccaatgt gaccgcccca cagagggtca gcgccgtaac cagcgatggg
     5761 gtcaccaaga ccggcgaatg gtcgccatcc ggcacgtcgt cggcccacat ccggcgggct
     5821 agcgaggcgt agtagtagag cgcgatgacc gagttgatgg cgcccacggc ggccagcacg
     5881 tagccccacg gctcgcccgc ggtggccagc acccggaaga cctcgaactt ggcgaaccaa
     5941 ccacccagcg gtgggatccc ggccagcgag aagaggaaga tcgtcatggc caccgtcagg
     6001 cccggggcat agctgaaggc ccccccgaat gaggagactt cggccgagcc ggtcttgcga
     6061 gatagagcga tgatgacggc gaaggcgccg aggttcatgg ccgtgtagat ggccagatat
     6121 gtgacgaccg ctgagagcgc ctggtccccg ttggacaatc cgtggccagc cacggccaga
     6181 ggagcaatca tgaaacctgt ctgggcgata cccgagtacg ccatgaggcg aaccacgttg
     6241 gtctggcgca gtgccacaag gttgccgacg gtcatcgagg tggcggccag gatccacatc
     6301 agtggctccc agacctcact acgggagtag aagccgacga acacgagagc cagcagggcc
     6361 acgaatccgg cggccttgga cgccacggcg aggaaggcgg tcaccggggt gggcgccccc
     6421 tcgtagacat cgggtgccca cgtgtggaag ggcacggccg agaccttgaa ggcgaagccg
     6481 gccacgatga acacgatgcc catagtgacc acggcggtcg atgtgccagc ggccgccatc
     6541 gacgtaccga tgtcggacaa caatgtcgag ccgctcacgc cgtagagcag cgacatcccg
     6601 tagagcatga ccgctgaagc gaacacgccc atcaggtagt acttcaggcc cgcctcggtg
     6661 gagtgcaggt ctcgcttgcg ccacgccgcc atcaggtagg ccgggatgga gagcaactcg
     6721 agtgcgacga agatcgacac caggtcgcgg gccgaggcca tcatcaccat gcccatgact
     6781 gaggccagca ggaggccgta gtactcgttc tcccagtagt caccctcggc cacgtagttg
     6841 gtggacagca ggaccaccac gta
//
LOCUS       DASCMR010000349         7131 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001721407, whole genome shotgun sequence.
ACCESSION   DASCMR010000349 DASCMR010000000
VERSION     DASCMR010000349.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 7131)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7131)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7131
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001721407"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            99..794
                     /locus_tag="QGG16_08295"
     CDS             99..794
                     /locus_tag="QGG16_08295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HJP25312.1"
                     /translation="MGIEETNLLEAMRTTFSCRDFTDAPVADDQLHRILDAARFAPSG
                     GNRQGSHVVVVRDRALRQRLGELCGPTMRLYAAQGAAGETPFNAVVESAVDPEVVMAG
                     DDSTPTGPPGLFERLGEVPVVLVVTVDLSVVASMDKDLDRVGVVTGASVYPLVWNILL
                     AARTEGLAGVVTTAVVPAEDEVRSLLGLPEHHAVAAMVPLGEPVRQLTKLSRRPVENF
                     TTIDRFDGPPLTA"
     gene            838..1677
                     /locus_tag="QGG16_08300"
     CDS             838..1677
                     /locus_tag="QGG16_08300"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HJP25313.1"
                     /translation="MELGITIHLTDRSMDVRDLALAAEERGFSSLWVPEHTHIPTNRL
                     TSAPDGESELADEYARSPDPWISLAAAAAVTGRIRLGSAVSLAAQHHPINLAKAVASV
                     DCLSAGRTVCGVGFGWNREEMADHGVDFATRRARVREHVAAMRSLWADEEAEFHGEFV
                     DFDPCWSWPVPVQRPGPSVLIGGGGGPRLLAEVAAWADGWLPIGGSGLQAGMEALRMI
                     CDEVGRDVADLAVIPIGTIPESGKLEHYASLGITETVLRVPSAGRDEVLPVLDAYMRF
                     LKV"
     gene            1681..3447
                     /locus_tag="QGG16_08305"
     CDS             1681..3447
                     /locus_tag="QGG16_08305"
                     /inference="COORDINATES: protein motif:HMM:NF012609.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP-utilizing enzyme"
                     /protein_id="HJP25314.1"
                     /translation="MARQHMEGDAQGELADFGLGPYVHGTPSRRFPVYTRGNAGEVYP
                     QPVFPLTSAMAKALAGDSTGDFLRSTGMLTDAECDEDADVFMGVFGGYTYINLSVTRV
                     VAIRTPGTSIDDADAPFLGAEGLAPEHVADRRDRNWSATVRGLRYGWRVLANPDLPAL
                     DDAAAEIATWRAGLTPIGEASDDELFDETAQMLPMISRIFALHLSITGGTGIGLDALR
                     RTAGRHGEDLMVLLGGLGDVDSAVPSDALWDLGRLVRGDPRLTAHFDEGLDGLETRLL
                     GDAAAVDFLAAFNGFLARHGARGPNEWEMGCDVWGTKPALPLALIDRIRHADNDHSPG
                     VRGARRATDREDAVAAARRRVRRHERWLFDRGLRCTVVRTRGRERCKTILVEAIHEGR
                     LRLRELGRRLAERHPGVAHDDLFFVTLDEAPAYRAEPEAFVDVVSARRAIRNQLEALE
                     PPFSFTGRLPPTDTWRRRADATTVEVLAPGTILTGTGGSPGVARGRARVVTDPSDPGD
                     LGPGDVLVAPLTDPSWTPLFVPVEAVVVDVGGQMSHAVIVSRELGLPCVVAATGATTA
                     ILDGTLIEVDGAAGTIRILGDD"
     gene            complement(3449..4540)
                     /gene="serC"
                     /locus_tag="QGG16_08310"
     CDS             complement(3449..4540)
                     /gene="serC"
                     /locus_tag="QGG16_08310"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: protein motif:HMM:NF003764.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HJP25315.1"
                     /translation="MTTSTRVHNFCAGPCTLPVSVLEEVRDELLDFDGTGMSIIEASH
                     RAPAYDAVHMNALADFRSLASVPDEFSILFLQGGASLQFAQVPMNLLADGETAGYVNS
                     GTWGKKALGDARKVAPVYEAWTDAEGAFDRMPGTDEIEVSDGSRYLHLTSNETIGGIR
                     FPELPSANVPLVTDMSSDFLSRPIDWDVHDLVYGGAQKNLGPAGLAVVIVRKDRLSSH
                     GRDLSSYLDYATHDSNDSMANTPPMFAIYVMGKVLRWMQTEGGLATFEQRAAERASIL
                     YGAIDGSDGWYACPVDEASRSQMNIVFRLPDEDLEERFVAEAADAGMVNLKGHRSVGG
                     IRASVYNALPVDSVRMLVDFMDGFRSAHG"
     gene            complement(4756..6021)
                     /locus_tag="QGG16_08315"
     CDS             complement(4756..6021)
                     /locus_tag="QGG16_08315"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021127.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0045227 - capsule polysaccharide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HJP25316.1"
                     /translation="MSEPVHPLFRSERRLAWRLQVVTMVALLILLVADLVDSGDPEPS
                     ALIEAPVETPVNSTVPAAGSSAVTSTNGTDEVEPTSTAPTPLSFTLVATGDIISHGAV
                     AERAARENAWDFTPLFARIRPIISGADLALCHLESPLSMDDQDLSFRGTFRVPSSLAD
                     AIADAGYDGCSLASNHALDSGPSSVTATLHHLRRVGLATAGMADTEDANGPAWFNPGG
                     LRVAHLSVTDLINGRDLPVDPPWMVPHLDVDRVIDEAAAARSDGADFVVVSVHWGEEY
                     RADPTDRQRSAAERLLAAPEVDLVLGHHAHVVQPVVRRGGDAVAFGLGNLLTNQPGDE
                     TNPCSSCPPETQDGLIAWFQVTETADGAQITDLGYVPTWVDRETTHEVVPIGINEPDL
                     ADPDMLADSAARTAAVVEPVLRRLTFITG"
     gene            complement(6018..>7131)
                     /locus_tag="QGG16_08320"
     CDS             complement(6018..>7131)
                     /locus_tag="QGG16_08320"
                     /inference="COORDINATES: protein motif:HMM:NF014081.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJP25317.1"
                     /translation="NLCMHGINDPMDAFLSRSSTHRPPVNYGGATDQYSHRAAIGAGI
                     DYATDRHLDELIRRADADLRGGALGIHEQPEYVPGVTLDEMLRHGDLAASHGVPLCLH
                     LRYSENLEPGTQEEAIAEAVTVARRTGCAVHIEHVNSTGGTGRMAEAIAQIEAARADG
                     LALTACSYPYTFWATYANSARFDNFREKYGITVADLQIAATSTRLDEAGWQAARKDNL
                     LTAAFAMSDDDIELPLTTPWIMVGSDAILERPHNNHPRASGCFSRVLGHYVRDQGVLT
                     LPEALAKMTILPARLLEGSSPAMAQRGRLSAGAAADVTVFDPATISDRATIEKTWLES
                     VGVHHVVVNGQVVREAGTTNRSARPGVPLVSQVDAG"
BASE COUNT         1096 a         2250 c         2539 g         1246 t
ORIGIN      
        1 gatcaccatc ccgtaccggt ctctggacgg cttctgggct gaggacggcc cggtttcccg
       61 catcgaatag ccggaggtct accgcctagt tttcggtcat gggtattgaa gagaccaacc
      121 tcctcgaggc gatgcgaacc acgttctcgt gtcgggactt cacagatgct ccggtcgccg
      181 acgaccagct ccaccggatc ttggacgcgg cccgcttcgc tccgtcaggc ggcaaccggc
      241 agggttcgca cgtggtcgtg gtccgggacc gcgccctgcg ccaacggctt ggcgaacttt
      301 gcggtccgac catgcgcctc tatgcggcac agggcgccgc gggcgagacg ccgttcaatg
      361 ccgtcgtcga atctgcggtc gaccccgagg tggtgatggc aggcgacgac tcgaccccca
      421 cgggcccccc gggtctgttc gaacgcctcg gcgaggtgcc ggtggtcctc gtcgtcaccg
      481 tggacctgtc ggtcgtggcg tcaatggaca aggacctcga ccgggtcggc gtggtcactg
      541 gtgcatcggt gtacccattg gtctggaaca tccttctagc ggcccgcacg gaaggcctgg
      601 ccggcgtggt taccaccgcc gtggtgcccg ccgaggatga ggtgcgaagc ctcctggggc
      661 tgcccgaaca tcacgcggtg gcagccatgg tgcccctcgg cgaacccgtc aggcaactca
      721 cgaaactctc cagacggccg gtggagaact tcacgaccat cgaccggttc gacgggccac
      781 cgctcaccgc ctgaccgggc accggcgaca gggcgactgg ccgatgggaa cgatctgatg
      841 gaactgggca tcaccatcca cctaaccgac cggtcaatgg atgttcgtga tcttgccttg
      901 gcggcagagg agcggggctt ctcgtcgctc tgggtgcctg aacacaccca cattccgacc
      961 aaccggctca cctcggctcc ggacggtgaa tccgagttgg ctgacgagta cgcgcggtca
     1021 cccgacccct ggatctccct cgcggcagcg gcagccgtca ccgggcggat ccggctgggt
     1081 tccgccgtgt cgctggccgc ccagcatcac ccgatcaatc tcgccaaggc cgtggccagc
     1141 gtggactgcc tgtcggccgg ccgcacggtg tgcggtgtgg gcttcggatg gaaccgggag
     1201 gagatggccg accacggggt cgacttcgcc acccgccggg cccgggtgcg tgaacacgtg
     1261 gccgctatgc gaagcctgtg ggctgacgag gaagcggagt tccacggcga gttcgtcgac
     1321 ttcgacccct gctggtcgtg gccggtaccc gtccagcggc ccgggccatc ggtcctgatc
     1381 ggcggcgggg gaggaccccg cctgctcgcc gaggtggcgg cctgggccga cggctggcta
     1441 cccattggag gatctggtct gcaggcagga atggaggcgc tccggatgat ttgcgacgag
     1501 gtgggacggg acgtggcgga cctggcggtc atccccatcg gcaccattcc tgaatcaggg
     1561 aagttggagc actacgcgtc gctcggtatc accgagacgg tgctccgtgt tccgtccgcc
     1621 ggtcgcgacg aggtcctgcc ggtactcgac gcctacatgc ggttcctcaa ggtctgaccg
     1681 gtggctcggc agcacatgga aggggacgct cagggcgaac tggctgactt cggactgggg
     1741 ccctacgtac acgggacgcc gagccgacgg tttccggtct acacccgtgg aaacgccggc
     1801 gaggtctatc cgcagccggt ctttccgctt acctctgcca tggccaaggc gttggccggg
     1861 gattcgacgg gtgactttct gcgatccacc gggatgctca ccgacgctga gtgcgacgag
     1921 gatgccgatg tcttcatggg tgtgttcggt ggttacacgt acatcaatct ttcagtcacc
     1981 cgggtggtgg ccatccggac gcccggaaca tccatcgacg atgccgatgc accgttcctg
     2041 ggggcagagg gactggcccc cgagcacgta gcggaccgtc gcgaccggaa ctggagcgcc
     2101 acggtgcgcg gcctccggta cggctggcgg gtgttggcca acccggacct cccggcgttg
     2161 gacgatgcgg cggccgagat cgccacctgg agggccggcc tcacaccgat cggcgaggcc
     2221 tccgacgacg agttgttcga cgagacggcg cagatgctcc caatgatcag ccggatcttc
     2281 gccctccacc tctcgatcac cgggggcact ggaatcggtc tcgacgcctt gcgacggaca
     2341 gcgggtcgcc atggcgagga cctgatggtc ctgcttggcg gactgggcga cgtggattcg
     2401 gcggttcctt ccgatgccct ctgggatctc ggacgcctgg tacgaggtga tccccgtttg
     2461 accgcccact tcgacgaggg gctcgatggc ctcgagactc ggcttctcgg cgatgccgca
     2521 gcggtggatt tcctggcggc ctttaacggg tttctcgctc gacacggtgc ccgcggcccc
     2581 aacgagtggg agatgggctg tgacgtgtgg gggacaaagc cggcgttgcc gttggccctc
     2641 atcgaccgca tacgccatgc cgacaatgac cattctccgg gtgtccgggg ggctcgacgg
     2701 gcgacggacc gtgaagatgc ggtggcagcg gcccggcgcc gtgtccgccg ccacgagcga
     2761 tggctgtttg accgggggct gcgatgcacg gtggttcgca cccggggccg ggagcggtgc
     2821 aagacgattc tggtggaggc catccacgag ggtcgactcc gactccggga actcggccgc
     2881 cgcctggccg aacgccatcc cggcgtggct catgatgacc tgttcttcgt gacccttgac
     2941 gaggcccccg cctaccgggc cgagcccgag gcgttcgtcg atgtggtgtc cgcacgacgg
     3001 gccatccgaa atcagctgga ggcgctcgaa ccgccgtttt ccttcaccgg ccgactccca
     3061 ccgacggaca cctggcggcg acgtgcagat gcgacgaccg tcgaggtgct ggcgccggga
     3121 accatcctca ccggcacggg cggctcaccc ggcgtggccc gagggcgggc acgggtggtc
     3181 accgacccgt cagaccccgg cgacctagga ccgggtgacg tcctggtggc accgttgacc
     3241 gatccgtcgt ggacaccgtt gttcgtgccc gtggaggccg tggtggtcga cgttggcggg
     3301 cagatgagcc acgcggtgat cgtgtcgcgt gagctgggcc tgccgtgcgt ggtggccgcc
     3361 accggagcga ccaccgccat tctcgacggc acattgatcg aggtcgacgg tgccgccggg
     3421 acgattcgga ttctgggcga cgactaagtc agccgtgggc ggagcggaac ccgtccatga
     3481 agtcgacgag catccggaca ctgtccaccg ggagggcgtt gtagacgctg gcccggatac
     3541 cacccacgct gcggtggccc ttcaggttca ccatgccggc gtcggcggcc tcggccacaa
     3601 accgctcctc caggtcctcg tcgggcaggc ggaacacgat gttcatctgt gatcggctgg
     3661 cctcgtcgac cgggcaggcg taccacccgt cgctcccgtc gatggctccg tagaggattg
     3721 aagctcgctc tgcggcccgc tgctcgaagg tggccagacc gccctcggtc tgcatccagc
     3781 gaagcacctt gcccatgacg tagatggcga acatgggggg cgtgttggcc attgagtcgt
     3841 tggagtcatg ggtggcgtag tcgaggtagg agctcaggtc gcggccgtgg ctcgacagcc
     3901 gatccttccg gacgatcacg acagccagac cggcgggccc gaggttcttc tgggcgccgc
     3961 cgtacacgag gtcgtggacg tcccagtcga tggggcggct caggaagtcc gagctcatgt
     4021 cggtcaccag cggtacgttc gccgacggca actcggggaa tcggatgccg ccgatggtct
     4081 cgttgctggt taggtggagg taacggctgc cgtcacttac ctcgatctcg tctgtgcccg
     4141 gcatgcggtc gaaagcgccc tcggcgtcgg tccacgcttc gtacacagga gcgaccttgc
     4201 gggcgtcgcc gagggccttc ttgccccagg tgccggagtt cacgtagccg gccgtctcgc
     4261 cgtcggccag caggttcatc ggaacctggg cgaactgcaa cgaggcgccg ccctgcagga
     4321 acaggatgga gaactcgtcg ggcaccgaag ccaacgaacg gaagtcggcc agggcgttca
     4381 tgtggacggc gtcgtaggcc ggggcgcgat ggctggcttc gatgatcgac atgccggtgc
     4441 cgtcgaagtc gaggagttcg tcacgcacct cttcgaggac cgacaccgga agggtgcacg
     4501 ggcccgcgca gaagttgtgg acacgggtgg acgtggtcat cggggttctc ccttggtcga
     4561 gcccgggccg gccgtagcgg acacgaggtc gtcggtagat gtctccgtga ggggacaggg
     4621 cctgaatgga ctagcccatc ctacttgagt ggtttcggcg gggggagagg ggtcggcccc
     4681 gggccgctcg ttggcgtgac ccggtcgacc ggtgatctgg gtcaacgatt ggcctgtgtc
     4741 aacgggtggt aggtatcagc cggtgatgaa cgtgaggcga cgcaggacgg gttcgaccac
     4801 cgcggcggtc cgggcggccg agtcggccag catgtcggga tcggccagat cgggttcgtt
     4861 gattccgatg ggcaccacct cgtgggtggt ttcccgatca acccacgtcg ggacatagcc
     4921 caggtcggtg atttgggcgc catcagccgt ctcggtgacc tggaaccagg cgatgaggcc
     4981 gtcttgggtt tcgggtgggc aagaactgca agggttggtc tcgtcgccgg gctggttggt
     5041 gagcagattg cccagtccga acgccacagc gtcgccacca cgtcggacta ccggctggac
     5101 gacgtgggcg tggtgcccga gcaccaggtc gacctcgggg gcggctagca gacgttcagc
     5161 tgccgagcgt tgtcggtccg tggggtcggc ccggtactcc tcgccccagt gcacgctgac
     5221 gaccacgaag tcggcaccgt cggatcgggc cgccgccgcc tcgtcgatca cccggtccac
     5281 gtcgaggtgg gggaccatcc atggtgggtc cacgggaagg tcccggccgt tgatgaggtc
     5341 ggtgaccgag aggtgggcca cccggaggcc gccgggattg aaccaggctg gcccgttggc
     5401 gtcctctgtg tcggccatgc cggcggtggc cagtccgacc cgccgtaggt ggtgaagagt
     5461 ggccgtcacg ctggatggac ccgaatccag agcgtggttc gacgcgagtg agcagccgtc
     5521 atagccggcg tcggcaatgg cgtcggccag cgatgacggc acccggaacg tgcctcggaa
     5581 gctgaggtcc tggtcgtcca tcgacaacgg gctctcgaga tgacagaggg ccaggtctgc
     5641 accactgatg atcgggcgaa tccgtgcgaa caggggagtg aagtcccatg cgttctctct
     5701 ggcggcccgt tcagctactg caccgtggct gatgatgtcc ccggttgcca ccagcgtgaa
     5761 cgacagcggc gtcggggcgg tactcgtcgg ttcgacctca tcggtgccgt tggttgaggt
     5821 cacggcgctt gacccggcag caggaaccgt gctgttgacc ggtgtttcaa ccggggcctc
     5881 gatcagggcc gacggttccg ggtcgccgct gtccacgagg tcagccacga ggagtattag
     5941 gagggccacc atggtgacga cctggagccg ccaggccagt cgccgttcgg aacggaacag
     6001 agggtggacg ggttcgctca cccggcgtcg acctggctca cgagaggcac gccgggacgc
     6061 gctgaccggt tggtggtacc ggcctcccga acaacctgtc cgttgaccac cacgtggtgg
     6121 acaccgaccg actccagcca cgtcttctca atggttgcac ggtcggaaat ggtggccggg
     6181 tcaaagacgg tcacgtcggc tgccgctccg gccgagaggc ggccccgttg ggccatggcc
     6241 gggctggaac cctccagcag tcgggccggg aggatggtca tcttggccaa tgcctcaggc
     6301 agcgtcagta cgccctggtc gcgcacgtag tggcccagca cccgactgaa acagcccgat
     6361 gcccggggat ggttgttgtg gggcctttcg aggatggcgt cggaccccac catgatccag
     6421 ggggtggtga gcggcagttc gatgtcgtcg tcggacatgg cgaacgccgc ggtgagaagg
     6481 ttgtccttcc gagctgcttg ccagccagcc tcgtcaaggc gcgtggacgt ggccgcgatc
     6541 tggaggtcgg ccaccgtgat gccgtacttc tcccggaagt tgtcgaaccg ggcgctgttc
     6601 gcgtaggtgg cccagaaggt gtaggggtag gagcaggctg tcagggccag cccgtcggcc
     6661 cgcgcggctt ctatctgggc tatcgcctcg gccatccgcc cggtgccgcc ggtcgagttg
     6721 acgtgctcga tgtggacggc acagcccgtt cgccgtgcca cggtgaccgc ctcggcaatg
     6781 gcctcctcct gggttcccgg ttccaggttc tccgagtacc ggaggtgcag gcagaggggt
     6841 acgccgtggg aggcggcgag gtcgccgtga cggagcatct cgtcgagggt gacgccgggg
     6901 acgtattccg gttgttcgtg gatgcccagt gcgccccctc gtaggtcagc gtcggctcgt
     6961 cggatcaact cgtcgagatg gcgatcggtg gcgtagtcga tgcccgcacc gatggctgcc
     7021 cggtggctgt actggtcggt ggcgccgccg tagttgaccg gcggccggtg ggtagacgag
     7081 cgcgacagga atgcgtccat tgggtcattg atgccgtgca tgcagaggtt g
//
LOCUS       DASCMR010000350         1514 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001721923, whole genome shotgun sequence.
ACCESSION   DASCMR010000350 DASCMR010000000
VERSION     DASCMR010000350.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1514)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1514)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1514
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001721923"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..489
                     /locus_tag="QGG16_08325"
     CDS             <1..489
                     /locus_tag="QGG16_08325"
                     /inference="COORDINATES: protein motif:HMM:NF015431.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HJP25318.1"
                     /translation="VNTPVVEAGLETEPLFDEERIVVAPGDHPLAGAGTIDVATLAEH
                     RVMLTPQGTTFRDAIDRELEAVGLRLQAAAEVDGLRLLASLAYQGYAPALLPASAVSG
                     YPEGGWSLVHVEGLARRSVGLVRNRRTTPSMPVLATRDVLRDVIREIAPHQPGIHVTL
                     EP"
     gene            486..>1514
                     /locus_tag="QGG16_08330"
     CDS             486..>1514
                     /locus_tag="QGG16_08330"
                     /inference="COORDINATES: protein motif:HMM:NF013225.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HJP25319.1"
                     /translation="MSNTAATSTDGGPSESSHPAGPGGLALRSRTGGSVAFGVRDLGG
                     RRVLAVEIAGENRGALRPADGENLAIAARTAREKRIPLVCFVASSGAAIGEGVGAVHG
                     WGTAAREFVANSGIVPTIFCVTGPTVSGPALLLGLADLVVMVDDSYAFVSGPSMVRQF
                     TGEDLSNEGLGGSSMHAGTSGVAHFTVTDRAEADDLIAELLGYLPDHADVTPTGWPCS
                     DPTDRSTPEAGELIPDTPTGSYDVRDVLAAVVDDGHILEPRSGWATNLVTAFATIGGR
                     PIGLVANQPQSMAGTLDIPASQKGGRFVAFCDAFNLPLVTFVDTSGFYPGKDLEWRGM
                     IRYGAQMAF"
BASE COUNT          225 a          539 c          503 g          247 t
ORIGIN      
        1 gtcaacacac cggtcgtgga ggccggtctg gagaccgagc cgttgttcga cgaggaacga
       61 atcgttgtgg cccccggcga tcaccccttg gccggagcgg gcaccatcga cgtggccacg
      121 ctggccgagc accgggtcat gctcacccca cagggcacca ccttccgtga tgccatcgac
      181 cgggaactcg aagccgtggg cctacgtctc caggcggctg ccgaggtcga cgggctccga
      241 ctgctggcct cgctggccta ccagggctat gccccagccc tcctcccggc tagcgccgtg
      301 tcgggctacc cggagggcgg ctggtcgctg gtacacgtcg agggactggc ccgtcggtcc
      361 gtggggctgg tccgcaaccg acgcaccacg ccgtccatgc cggtgctagc tacccgggat
      421 gtcctgcgtg acgtgatccg cgagatcgcc ccccaccagc ccggaatcca tgtcacgctg
      481 gagccatgag caacaccgct gcgacgtcga ccgacggcgg accctcagag tcatcgcatc
      541 ccgcggggcc cggtggcctg gcgctacgga gtcgcaccgg cggttcggtg gcgttcgggg
      601 tccgggatct gggcgggcgt cgggtgctgg ccgtggagat cgccggcgag aaccggggcg
      661 ccctacgacc ggctgacggc gagaacctgg ccatcgcggc tcgaacggca cgcgaaaagc
      721 ggataccgct ggtctgcttc gtggcctcca gcggcgcggc catcggggaa ggcgttgggg
      781 cggtccacgg ttggggtacc gcggcccgag agttcgtggc caactccgga atcgtgccca
      841 ctatcttctg cgtgaccgga ccgacggtgt ccggtccggc cctcctgctg ggcctggccg
      901 accttgtagt catggtcgac gactcctacg cgttcgtcag tggcccgtcc atggtccgac
      961 aattcaccgg cgaggacctc tccaacgagg gcctcggcgg ttcctccatg cacgccggca
     1021 cctcgggcgt agcccatttc acggtgaccg accgagccga ggccgacgac ctgatcgccg
     1081 agttgctggg ctacctgccc gaccacgccg acgtcacccc cactggctgg ccctgttccg
     1141 acccgaccga tcgatccacg ccggaggccg gtgaactcat cccggacacg cccaccggca
     1201 gctacgacgt ccgcgacgtc ctggctgccg tggtcgacga cggccacatt ctcgaaccgc
     1261 ggtccggttg ggccaccaat ctggtaacgg cgttcgccac tattggcggt cgtcccattg
     1321 ggctggtggc caaccaaccc cagtcgatgg ccggcaccct ggatattccg gcgtcccaga
     1381 aaggcggccg gttcgtggcc ttctgcgacg cgttcaacct gccgttggtg accttcgtcg
     1441 acacatcggg cttctacccc ggcaaggacc tggagtggcg gggcatgatc cgctacggcg
     1501 cccaaatggc gttc
//
LOCUS       DASCMR010000351         2424 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001734003, whole genome shotgun sequence.
ACCESSION   DASCMR010000351 DASCMR010000000
VERSION     DASCMR010000351.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2424)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2424)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2424
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001734003"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..879)
                     /locus_tag="QGG16_08335"
     CDS             complement(<1..879)
                     /locus_tag="QGG16_08335"
                     /inference="COORDINATES: protein motif:HMM:NF018449.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SBBP repeat-containing protein"
                     /protein_id="HJP25320.1"
                     /translation="MSGPPAGAWSSDNGAVAVFSSYPGIKGDEVYSVAVDSSGNVYTT
                     GYFNGTVDFDPGPGTANLTAKNISHSDAFVSKLDSSGNYVWAKSFGGIGKDYGYSVAV
                     DSSGNVYITGRFEGHANENHIVDLDPGSGTTNVTHNGNGDVFVSKLDSSGDLVWAKSF
                     GGSGTDYGHSVAVDSSGNVYTTGYFNDTVDFDPGAGTTNLTSNGSSDVFVSKLDSSGN
                     YVWAKNLGGTGLDYGYSVAVDSSGNVYTTGGFRGTVDFDPGSGTANLTAVGTEAFVSK
                     LDSSGNYVWAKSFDMNS"
     gene            1031..1177
                     /locus_tag="QGG16_08340"
     CDS             1031..1177
                     /locus_tag="QGG16_08340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25321.1"
                     /translation="MNREPGGEFCGTPPRKRKNFWNSEYVYHEAIEAVTDHALVLAGL
                     VVGS"
     gene            1243..1797
                     /locus_tag="QGG16_08345"
     CDS             1243..1797
                     /locus_tag="QGG16_08345"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: protein motif:HMM:NF013375.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004765 - shikimate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HJP25322.1"
                     /translation="MDSEPTVTPPRHLALVGLMGVGKTAVGASVASRLGCRHVDLDRA
                     VTQLAGRSIGVIFHEGGEESFRDLEEQALGLQMQAVDPIVLSTGGGVLGRETNRAVLA
                     REATVVWLRATPETLAARVGDPSSRPLLADSDPVEALRRLASERTPAYETAADAVIDT
                     DGLDVSMVGTLVVDALPATDGAVQ"
     gene            1794..>2424
                     /locus_tag="QGG16_08350"
     CDS             1794..>2424
                     /locus_tag="QGG16_08350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012229374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HJP25323.1"
                     /translation="MIRLEVTLPEGRSYPVLVGPQAAEELASVLPSGVQRVAIVTQPD
                     IPVAVDPGVDHRIFPIPDGETAKALSTIEELCRAFATWGLTRGDAIVGVGGGVVTDVA
                     GFAAASYHRGLPVVHVATTLLAQIDAAIGGKTGVNLPEGKNLIGAFWQPAAVLCDTST
                     LDTLPAREMRCGLGEMAKYHFLGGDDLADLAFDQRVARCVEIKADIVVAD"
BASE COUNT          440 a          798 c          765 g          421 t
ORIGIN      
        1 gctgttcatg tcgaagctct tggcccacac gtagttgccc gacgagtcca acttcgaaac
       61 gaacgcttct gtgccgacgg ccgtgaggtt ggcagtgcct gagccggggt cgaagtcgac
      121 cgtgccgcgg aagccaccgg tggtgtacac gttgcccgac gagtcgaccg ccaccgaata
      181 gccatagtcg aggccggttc cgccgaggtt tttggcccac acgtagttgc ccgacgagtc
      241 caacttcgaa acgaacacgt cggaactgcc gttcgaggtg aggttggtag tgcccgcacc
      301 cgggtcgaag tcgaccgtgt cgttgaagta tccggtggtg tacacgttgc ccgacgagtc
      361 gaccgccacc gaatggccat aatccgtgcc ggatccgccg aagctcttgg cccacaccag
      421 gtccccggac gagtccaact tcgacacgaa cacgtcgccg ttgccgttat gggtgacgtt
      481 ggtagtgccc gaacccgggt cgaggtcgac tatgtggttt tcgttggcgt gcccttcgaa
      541 gcgaccggtg atgtacacgt tgcccgacga gtcgaccgcc accgaatagc catagtcttt
      601 gccgatgccg ccgaagctct tggcccacac gtagttaccc gacgaatcca acttcgaaac
      661 gaacgcgtca gaatggctga tgtttttcgc ggtgaggttg gcggtgcccg gtcccgggtc
      721 gaagtcgacc gtgccgttga agtatccggt ggtgtacacg ttgcccgacg agtcgaccgc
      781 caccgaatag acttcgtccc ctttgatacc ggggtagctg ctgaacacgg cgaccgctcc
      841 gttatctgac gaccacgcac cggccggtgg cccagacacc cacaccagcg tcgaagtggc
      901 tagagcgagt atcgcgacaa atggcagtac acgccgggtt gtaaaggcga aacgggcagg
      961 acgaggcatg gcaggctaga gcctacgaaa gccgcctcat ccgccctacc agtcgcttgt
     1021 ctttgtgccg atgaaccggg aacctggtgg tgagttctgt ggtacgcccc ccaggaaacg
     1081 caagaacttc tggaactccg agtacgtgta tcacgaagcc atcgaggcgg tcaccgatca
     1141 tgcgcttgtt ttggcagggc tggtggtcgg ctcgtagctc ttatctgtca cgccggccag
     1201 aatcatccca gccgccgcga cggccatcgc tagcctgttg cgatggactc tgagcccacc
     1261 gtgacgcccc cccgccacct ggcactggtc ggcctgatgg gggtcggcaa gacggctgtc
     1321 ggagcctcgg tggcctctcg tctgggttgc cgccacgtag acctggaccg agcggtaact
     1381 cagttggccg gacgctccat cggtgtgatc ttccacgaag gcggagagga atccttccgc
     1441 gacctggaag agcaggccct gggcctccag atgcaagccg tggaccccat cgtgttgtcc
     1501 accggtggag gcgtcctggg ccgggaaacc aaccgggcgg tcctagcccg ggaggcgacc
     1561 gtggtgtggc tccgggccac acccgagacg ctggccgccc gggtaggcga cccatcgagc
     1621 cgccccctgc tagccgacag tgacccggtc gaagcactgc gacgtctggc ttccgagcgg
     1681 accccggcct atgagacagc tgccgacgcg gtgatcgaca ccgacgggtt ggatgtctcg
     1741 atggtcggca ccctcgtggt ggacgccttg ccggccaccg acggagctgt ccaatgatcc
     1801 gcctcgaggt gacactgccc gaaggccggt cctaccccgt gctggtcggc ccgcaagcag
     1861 cggaggagct ggcttcggta ctgccatccg gggtccaaag ggtggccatt gtcacccagc
     1921 cggacattcc cgtcgccgtg gacccgggcg tagaccaccg aatctttccc atcccggacg
     1981 gcgagaccgc caaagcactg tccaccatcg aggaactctg ccgggccttc gcaacctggg
     2041 gcctgacccg cggcgacgcc atagtcggcg taggcggagg ggtggtcacc gacgtggccg
     2101 gcttcgccgc cgcctcctac caccgcggcc tacccgtggt tcacgtcgcc accacgctgc
     2161 tagcccagat cgacgcagcg atcggcggca agaccggcgt caacctcccg gaaggaaaga
     2221 acctgatcgg cgccttctgg caaccggcag ccgtgctgtg cgacacatcc accctggaca
     2281 ccctgcccgc acgcgagatg cgctgcggtc tgggcgaaat ggccaagtac cacttcctcg
     2341 gaggcgacga cctagccgac ctggccttcg accagcgggt ggcccgctgc gtggaaatca
     2401 aagccgacat agtggtcgcc gacg
//
LOCUS       DASCMR010000352         7044 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001734299, whole genome shotgun sequence.
ACCESSION   DASCMR010000352 DASCMR010000000
VERSION     DASCMR010000352.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 7044)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7044)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7044
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001734299"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..199)
                     /locus_tag="QGG16_08355"
     CDS             complement(<1..199)
                     /locus_tag="QGG16_08355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25324.1"
                     /translation="MDFPDRRVPWFEAVSLLVPLVAVLVPLARMLGTGATTMEEGTVL
                     VVASGILDGRLPHADVSYLYAP"
     gene            complement(336..2087)
                     /locus_tag="QGG16_08360"
     CDS             complement(336..2087)
                     /locus_tag="QGG16_08360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJP25325.1"
                     /translation="MYDLLIHGGTVVDGTGAPGTRADVAVTDGRISAIGDLTESDGSL
                     PEAAEVHNATGRIVCPGFVDPHTHYDAQLFWDPYATPSSQHGITSMVMGNCGFTIAPI
                     GDQSDADYLAAMLVKVEGMSPAALAEGLDWNWRTFGEFLDRFEGNLGVNVAGMVGHSA
                     IRRTVMKDDATSREATPAEIDAMKALLADSLAAGGLGFSTSRSFTHSDGDGLPVPSRT
                     AAADEVEALCAVVADHPGTTLEWVADGCMNGFREDEVDLMTRMSLAARRPVNWNVLTI
                     DAARPDDYRNQLRACDEVAEAGGKAMALTMPVLVGMNMHFHTFCALYSLPDWSEVMNL
                     PHDEKVAALSDPDTRRHLETRAASPDAGVFSRLTGWGRYRIGDTYSEPNEGLKGRLIG
                     DVARERGQRDFYTLLDVVLADDLRTVLWPGPTDDDPASWIMRQTAWDHDHVMIGGSDA
                     GAHLDRMAGASYTTQWLADCIRGQGLATVEGAIAHMTDVPARFFGLVERGRLTEGWHA
                     DVVVFDPETVGAGEFHLKHDLPGNSPRLYADAFGIERVYVNGTCTIVDGQPAGGLPGV
                     VLRSGTDTETVRIPADH"
     gene            2225..4843
                     /locus_tag="QGG16_08365"
     CDS             2225..4843
                     /locus_tag="QGG16_08365"
                     /inference="COORDINATES: protein motif:HMM:NF014026.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /protein_id="HJP25326.1"
                     /translation="MEHQVPNDGSSNHGSADDGPVWIEGVLADLTLDEKVDLMSGRDL
                     WSVRPVERLGLPALKVCDGPAGARGTGLLGTGIPALCIPCGTALGATWNPDLVEELGG
                     ALAAETRARGSHVLLAPTVNLHRTPLGGRSFECMSEDPVLTGKIASGYIRGVQSGGVA
                     TTVKHFVANDSEFERTTISSEVDDRTLREVSLRPFEMAVTEGGAWGVMSSYNRINGTY
                     AAEHHHLLTTVLRGEWDFDGIVVSDWFGAKSTAASASAGLDLEMPGPPRWYGERLVKA
                     VTSGEVAEATIDDAVRRLLRLMQRTGAVGEPHDRPERELDEPTHRTLVRRAAAEGFVL
                     LRNEPVGDDPTVGALLPLDPSGIDRLAVIGPNAATAMIMGGGSAALVAQHMTAPLDAI
                     VDRLGDRMEVVHELGAITERSAQPLGGRATATAGGERGFDVEYFDTMDRSGPVVGTRT
                     FRDGRILHFDAAPGVTDLRECSFRATTRFTPVVDGEHVLALVQSGRARLLVDGVVVID
                     GVDDPMGPGDEFFGFGSAERTAAVMLAAGQPVDVVIEWTAEGAAFLGGVKLGLRTPVA
                     DDLMDRAVAAAGDADVVVLVVGTNLDWETEGRDRESMDLPGDQPELIRRVCAANPRTV
                     VVVNAGSVVTSDWAENAPAVLATWFGGQEMADALVDVLVGDDEPSGRLPTTVPHRLAD
                     TPAYLHYPGENGRVVYTEGLFTGYRWYEARDIDVAFPFGHGLSYTRFEWGTPTVDAPD
                     TVADLETGRPVVVTVAVRNVGDRAGSEVVQAYVGCDAPRLSRPARELRGLAKVRLEPG
                     EEREVELVLDHRAFTYWDPGDPSYADLADAAPVAAGAGAERRTEAGWVVDSGIHRIHL
                     GASSADIRAVATVDLA"
     regulatory      4880..5013
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            5002..6108
                     /locus_tag="QGG16_08370"
     CDS             5002..6108
                     /locus_tag="QGG16_08370"
                     /inference="COORDINATES: protein motif:HMM:TIGR01254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate-binding
                     protein"
                     /protein_id="HJP25327.1"
                     /translation="MLRSRSVYSAVGLAATVLIGATSCGGDGASTTVPITSGGPVVVE
                     APANTAPTGLVTLIAHDSFWVSEGTLAAFTEATGIQVVLQTAGDTGQMVSSAILTVGD
                     PLGDVMFGVDNTFLQRALDADLFESYESSALSGVPDELQLDASHRVTPVDFGDVCVNY
                     WIDWFGDDLAAPTSLDDLADPAYADLLVVQNPETSSPGLAFLLATIAEYGDGWEDYWA
                     ALRDNGVVVTASWEDAYYGEFVAGGGDRPIVVSYASSPPAEVIYADPPIDTPPTGVVT
                     DTCFRQIEFAGILAGTNHRVAAELLVDFLLSPTFQEEIPLNMFVFPALATAELPPTFV
                     DFVELADDPHELDPADIEAHRNDWSERWTEIVLR"
     gene            6105..>7044
                     /locus_tag="QGG16_08375"
     CDS             6105..>7044
                     /locus_tag="QGG16_08375"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HJP25328.1"
                     /translation="MIPLRRALAALAVVVPAAFLGIFFLYPVGSILVRGLGAEGLRRL
                     VELPGRSSFRGVAWFTLWQAVASTVLTVAVALPGAHLLARRRFRGRSLLRAAATVPFV
                     LPTVVVGGAFLALFERLGLNDGPLRLTRTAGAILAAHVFFNVAVVLRTVGTFWEGLDP
                     RVAEQARVLGASPAQAFRWVTWPRLWPAVAAASAIVFLFCFTSFGVVLVLGGPTRATL
                     ETEIWRHAVFRGDLASATALALVQLAAVVAMVMVTNRLQRRRAVAQRVVRRVPPPRAS
                     GRLLAANLALLGVVLGLPIAVLVERSLTRGRSGGGWG"
BASE COUNT         1020 a         2244 c         2581 g         1199 t
ORIGIN      
        1 ctggggcata gaggtacgac acgtcggcat ggggtagtcg accgtcgagg atcccggacg
       61 ccacgacgag gacggtgccc tcctccatgg tggtggcgcc cgtgcccagc atgcgggcca
      121 gtgggaccag tacggcgacc agtggaacca gcaacgagac cgcttcgaac caggggacgc
      181 ggcggtcggg gaagtccatg gccgccgatc ctacggaacc cctcgcccct gatcgggtga
      241 gccggtcagc ctggtccggt caatcaggac cgatcaaccc aggctgaggg gctcggttcc
      301 tggtagccgg tgaccggatc ggccaccggg gaccgtcagt ggtcggcggg aatcctgact
      361 gtctcggtgt cggtgcccga acggagcacg acgcccggaa gaccaccggc gggttggccg
      421 tcgacgatgg tgcacgtgcc gttgacgtag acccgctcga tgccgaacgc atcggcgtac
      481 aggcgggggc tgtttccggg taggtcgtgc ttcaggtgga actcgccggc tccgaccgtc
      541 tcgggatcga agacgaccac gtcggcgtgc cagccctcgg tgaggcgacc ccgctcgacg
      601 aggccgaaga agcgggctgg cacgtcggtc atgtgggcaa tggcgccctc gacggtggcc
      661 aggccctggc cgcgaatgca gtcggccagc cactgggtgg tgtagctggc accggccata
      721 cggtcgaggt gggcgccggc gtccgagccg ccgatcatca cgtggtcatg gtcccaggcg
      781 gtctgacgca tgatccagct ggccgggtcg tcgtcggtgg gcccgggcca cagcacggtg
      841 cgaaggtcat cggccaacac gacgtcgagc agcgtgtaga agtcgcgctg cccccgctcg
      901 cgggcgacgt cgccgatgag gcgacccttg aggccctcgt tgggctcgga gtaggtatcg
      961 ccgatgcggt agcggcccca gccggtgagg cgggagaaca cgccggcgtc gggagaggcg
     1021 gcccgggtct cgaggtggcg gcgggtgtcg gggtccgaca gggcggccac cttctcgtcg
     1081 tgggggaggt tcatgacctc gctccagtcg ggcagcgagt agagggcgca gaacgtgtgg
     1141 aagtgcatgt tcatacccac gaggaccggc atggtcaggg ccatggcttt accgccggcc
     1201 tcggccacct cgtcgcatgc ccggagctgg tttcggtagt cgtcgggtcg ggcggcgtcg
     1261 atggtcagga cgttccagtt gacgggtcgt cgggcggcga gtgacatccg ggtcatgagg
     1321 tcgacctcgt cctcgcggaa accgttcatg cagccgtcgg ccacccattc cagtgtggtg
     1381 ccgggatggt cggccactac ggcacacagg gcctcgacct cgtcggccgc tgcggtccgt
     1441 gatggcaccg gcaggccgtc accgtcgctg tgggtgaacg accggctggt cgagaatcca
     1501 aggcccccgg cggcaagtga gtcggcgagc agggccttca tggcgtcgat ctcggcgggg
     1561 gtggcctcgc ggctggtggc gtcgtccttc ataacggtgc gccggatggc gctgtggccg
     1621 accatgccgg ccacgttcac cccgaggttt ccctcgaagc ggtcgaggaa ctcgccgaac
     1681 gtccgccagt tccagtcgag gccctcggcc aaggcggccg gcgacatgcc ttctaccttg
     1741 acgagcatgg cggcgaggta gtcggcgtcg gactggtcac cgatcggggc gatggtgaag
     1801 ccacagttgc ccatgaccat gctggtgatg ccgtgctggc tcgatggcgt ggcgtagggg
     1861 tcccagaaca actgggcgtc gtagtgggtg tgggggtcga cgaagcctgg gcacacgatg
     1921 cggccggtgg cgttgtggac ctcggcggcc tcggggagcg agccgtcaga ttcggtgaga
     1981 tcgccaatgg cgctgattcg gccgtcggta accgccacat cggcccgggt ccccggggca
     2041 ccagtgccgt ccaccacggt gccgccgtgg atcaggaggt cgtacatgcg acgaggctaa
     2101 ccctcggtat ccgccgtttc ctgacggagt gtcagatttt tgctgtcgac ccgaacaggc
     2161 gtggacggct ccggtggggg acgatcccac cagggaagaa gattccggca gggaggaacc
     2221 caccatggag caccaggtgc cgaacgacgg atcgtcgaac cacggatcgg ctgatgacgg
     2281 accggtctgg atcgagggcg tgctggccga tctgacgctg gatgagaagg tcgacctcat
     2341 gtcggggcgc gacctgtggt cggtgcgccc ggtggagcgc ctcggcctcc cagcgctgaa
     2401 ggtgtgcgac gggccggcgg gggcccgggg caccggcctg ctgggcaccg gcattccagc
     2461 gctgtgcatc ccgtgcggca cggcactggg tgctacttgg aaccccgacc tggtcgagga
     2521 gttgggtggt gcactggccg ccgagacgcg ggcccggggc agccacgtgc tactggcccc
     2581 cacggtgaac ctgcaccgca cgccgctggg cgggcggagc tttgagtgca tgtccgaaga
     2641 tccggtgctg accgggaaga tcgcctctgg ttacatccgc ggcgtgcaga gcggcggggt
     2701 ggccaccacg gtcaagcact tcgtggccaa cgattccgag tttgagcgga ccaccatctc
     2761 gtcggaggtc gacgaccgga ctctgcggga ggtgtcgtta cgtcccttcg agatggcggt
     2821 caccgaggga ggggcgtggg gcgtgatgtc gtcctacaac cggatcaacg ggacgtacgc
     2881 agcggagcac catcacctcc tgaccacggt gttgcgcggc gaatgggact tcgacgggat
     2941 cgtggtatca gactggttcg gcgcaaagtc gacggccgcc tcggcgtcgg ctggtttgga
     3001 tctggagatg cccggaccac cccgttggta cggggagcgc ctggtgaagg ccgtgacgtc
     3061 cggcgaggtt gccgaggcca cgatcgacga cgcggttcga cgcctattgc ggctcatgca
     3121 gcgcaccggt gcggtgggcg aaccccacga ccgaccggaa cgggaactgg acgagccgac
     3181 gcatcggacg ctggtccgtc gggcggccgc tgaggggttc gtgctgctga gaaatgaacc
     3241 ggtgggagac gacccgacag tcggagccct actgccgctg gacccgtcgg ggatagaccg
     3301 tctggccgtc atcggcccca acgcggccac ggccatgatc atgggaggcg gatcggccgc
     3361 cctggtggcc cagcacatga cggcaccgct ggacgccatc gtggatcgcc tcggcgatcg
     3421 gatggaggtc gtccacgagt tgggggcgat caccgaacgc tcggcccaac cgctgggcgg
     3481 ccgggccacg gccacggctg gtggagagcg gggtttcgac gtcgagtact tcgacaccat
     3541 ggaccgatcc ggaccggtgg tcggcaccag gacgttccgg gatggacgaa tcctgcactt
     3601 cgatgccgcc ccgggagtca ccgacctgcg ggagtgctcg ttccgggcca ccacccggtt
     3661 cacgccggtg gtcgacggcg aacatgtgct ggccctcgtg cagagtgggc gggcccgcct
     3721 gctggtcgac ggtgtggtgg tgatcgacgg cgtggacgat cccatgggcc ccggcgacga
     3781 gttcttcggt ttcggaagcg ccgagcggac tgctgcggtg atgctggccg cgggtcaacc
     3841 ggtagacgtc gtcatcgagt ggaccgccga gggtgcggcc ttcctgggag gggtgaagct
     3901 aggcctgcgg accccggtgg ccgacgacct catggaccgg gcggtcgccg cggcgggcga
     3961 cgccgacgtc gtggttctgg tggtgggcac caatctggac tgggagaccg aggggcgcga
     4021 ccgtgagtcg atggacctgc ccggcgacca gcccgagctg atccgtcggg tatgcgctgc
     4081 caacccgcgc accgtggtgg tggtcaacgc cggttcggtg gtgaccagcg actgggccga
     4141 gaacgcaccg gccgtgctgg ccacatggtt cggcggccag gaaatggccg atgcgctggt
     4201 cgacgtcctg gtgggtgacg acgagccgtc ggggcgtctc ccgaccaccg tgccccaccg
     4261 cctggccgac acgccggcct atctccacta cccgggtgag aacggacggg ttgtctacac
     4321 cgaggggctg ttcaccggct accggtggta cgaggcccgt gacattgacg tggccttccc
     4381 tttcggacac gggctgtcct atacccggtt tgagtggggg acaccaacgg tggatgcccc
     4441 cgacacggtg gctgatctgg agacgggccg cccggtggtg gtaaccgtgg ctgtgcgcaa
     4501 cgtgggcgac cgggcgggtt cggaggtggt gcaggcctac gtggggtgtg acgccccccg
     4561 cctgtcccga ccggcacgcg agctccgggg cctggccaag gtcagactgg agccgggcga
     4621 ggagcgggag gtcgagctgg ttctggacca tcgggccttc acctactggg atccgggcga
     4681 cccgtcgtac gccgacctgg ccgatgcggc cccggtcgcc gccggggccg gtgcggagcg
     4741 acggaccgag gccggctggg tggtcgattc gggtatccac cgaatccacc tgggggcctc
     4801 atcggccgat atccgggccg tggcgaccgt cgacctcgcg tgatcagggg atcggcggcc
     4861 cggggctagc ctcaccgtcg acaatcgacc ggggagctcg ggccttgtgc cgggctgaga
     4921 gggcagtggc cgttgttcca acgggggcac tgtcgacccg acctgaacct gctccggata
     4981 atgccggcga agggagatcc catgttgcga tcccgatccg tgtactcggc ggtcggcctt
     5041 gccgcgacgg ttctcatcgg agccacctcc tgtgggggcg acggcgcctc caccaccgtt
     5101 cccatcacct ccggtgggcc agtcgtcgtc gaggcaccgg ccaacaccgc tccgacgggg
     5161 ctggtcaccc tcattgccca tgactcgttc tgggtgtcgg agggaacgtt ggccgccttt
     5221 accgaggcca ccggcatcca ggtcgtcctc cagacggccg gtgatacggg ccagatggtc
     5281 tcctcggcca tcctgacggt cggcgatccg ctgggcgatg tcatgttcgg cgttgacaac
     5341 accttcctac agcgggcgct ggacgccgac ctgttcgagt cctacgagtc gtcggcactg
     5401 tccggcgtgc ctgatgaact ccaactcgat gcctcgcacc gggtcacccc ggtcgacttc
     5461 ggcgacgtct gcgtcaacta ctggatcgac tggttcggcg acgatctggc cgctccgacc
     5521 tcgcttgacg acctggccga cccggcgtac gccgacctac tggtcgtgca gaacccggag
     5581 acgtcgtcgc ccggtctggc cttccttcta gccaccattg ccgagtacgg cgacggctgg
     5641 gaggactact gggcggcgct acgcgacaac ggtgtggtgg tgaccgcgag ttgggaggat
     5701 gcctactacg gcgagttcgt agcgggcggc ggcgatcgtc cgatcgttgt cagctatgcc
     5761 tcgagtcccc cagccgaggt catctacgct gatccaccga tcgacacgcc gcccaccggc
     5821 gtggtcaccg acacctgctt ccgccagatc gagttcgcag ggatcctggc tggcaccaat
     5881 caccgggttg ccgccgagct gctagtcgac ttcctcctct cgccgacctt ccaggaggaa
     5941 atcccgctga acatgttcgt cttcccggcc ctagccaccg ccgaactgcc gccaaccttc
     6001 gtggacttcg ttgaactggc cgacgatcca cacgagttgg atcccgctga catcgaggcc
     6061 catcgcaacg actggtccga acgctggaca gagatcgtcc ttcggtgatc cctttgcgaa
     6121 gggcgctcgc cgcgctggct gtcgtagtcc cagcggcctt cctgggcatc ttcttcctgt
     6181 atccggtcgg gtcgatcctt gtccgggggc tgggggccga aggcttgaga cggctggtcg
     6241 agttgccggg acggtcgtcg ttccggggcg tggcctggtt caccttgtgg caggccgtgg
     6301 cctccacggt gctgaccgtg gccgtagctc tgcccggtgc ccacctgctg gcccggcggc
     6361 ggttccgggg acggtcgttg cttcgcgctg cggccaccgt gccgttcgtg ctacccaccg
     6421 tggtggtggg tggggcgttc ctggccctgt tcgagcgcct cgggctgaat gacggaccgt
     6481 tgcgcctgac ccggacggcc ggggcgatcc tggccgccca cgtgttcttc aacgtggccg
     6541 tcgtcctgcg aacggtcggt accttctggg aggggctgga tcccagggtt gccgagcagg
     6601 cccgggtgct gggggcgtcg cctgctcagg ccttccggtg ggtgacatgg ccgcggttgt
     6661 ggccagcggt ggccgctgcg tcggcgatcg tgttcctgtt ctgcttcacg tcgttcggtg
     6721 tggtgctggt gctaggcggt cccacccggg ccacgctgga gaccgagatt tggcgccacg
     6781 cggtgttccg gggagacctg gcctcagcca ccgcgctggc cttggtacaa ctggccgccg
     6841 tggtggccat ggtgatggtc accaaccgcc tgcagcgtcg gagggctgtg gcccagcggg
     6901 tggtgcgacg ggtgccgccc ccaagggcgt cgggtcggtt gttggctgcc aatctcgccc
     6961 tgctgggcgt ggtccttggg ctcccgatcg ccgtgctggt cgagcgctca ctaacccgcg
     7021 gtcggagcgg tggcggatgg ggag
//
LOCUS       DASCMR010000353         2576 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001734502, whole genome shotgun sequence.
ACCESSION   DASCMR010000353 DASCMR010000000
VERSION     DASCMR010000353.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2576)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2576)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2576
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001734502"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..278
                     /locus_tag="QGG16_08380"
     CDS             <1..278
                     /locus_tag="QGG16_08380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HJP25329.1"
                     /translation="LVPYLNAAMRMYADGHASAEDIDNGMKLGAAHPMGPLELSDMIG
                     LDTMMLVAETLFAEYGDDFYLPPPLLRRMVAAGHLGRKTGRGFYDYS"
     gene            complement(269..1723)
                     /locus_tag="QGG16_08385"
     CDS             complement(269..1723)
                     /locus_tag="QGG16_08385"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJP25330.1"
                     /translation="MDDHADHADTGEPPPGRWLSRTRERIRRRPDYRRLVLITALFGT
                     AAGSYPVTVLSASLPHIARDLGTTDDIITWVIAAPMLAFAVITPIIGKIGDLYGHRRT
                     YLVSFSLGTVLALATSLAWGITSLIVLRTLAQAAKAASGPSAMAMILSVFPQRDRTRA
                     LGIWAAVVALSPAVGVVTGGPLVEWLGWRILFVVQGLTVGLALLAALLVAPETPRRSG
                     IRFDVPGAITLGIGVSGLLLAVNRGISWGWTNPIVLVAAMTAPVSLGLFVAVENRSNA
                     PLLPPALLRRRAFTRPMTSQAVLQSGYMGAMVMAPFLLERRWGFRPTVIGLVMLPRPL
                     SFALCARLGGHHDPKHGARRVTVTGMLVFAFAMVLAGVGAQQRWLPMFLSGAMLAGAG
                     SGYIRPTVANSVTAAAGDADIGIAGGSMNMLQQIGAAVGITVLTALMADSLSGTRFLL
                     LHLAAAGAGLVAAWLALGIEDTPAGSDPTHPRQL"
     gene            1805..>2576
                     /locus_tag="QGG16_08390"
     CDS             1805..>2576
                     /locus_tag="QGG16_08390"
                     /inference="COORDINATES: protein motif:HMM:NF013663.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003951 - NAD+ kinase activity [Evidence
                     IEA];
                     GO_process: GO:0006741 - NADP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+)/NADH kinase"
                     /protein_id="HJP25331.1"
                     /translation="MNANTDAATGTDTAIGSAGSPLPLPLAVGLVVNPRSGTDVRRAV
                     AAAGAVTIEDKANVVRRVVLGAREAGVDRFVVHTDTHRIVQRATETMRGLDLHWLDYE
                     MTFTEEDTVAAVAAMRDLGCGVVVVLGGDGTNRAAARAWPDLVVVPLSTGTNNAFPVL
                     AEATIAGAAAGHVATGRVPVDEVTRRAMVVRVRPDGASTPDDLALVDAVAVDDPYLGS
                     FELFEPANLRTAVVSRADPASVGFAGVGGLVEPVGLDED"
BASE COUNT          435 a          810 c          937 g          394 t
ORIGIN      
        1 tgctcgtgcc gtatctgaac gccgcgatgc ggatgtacgc cgacggtcac gccagtgctg
       61 aagacatcga caacggcatg aagttgggtg ctgcccatcc gatgggcccg ctggaactca
      121 gcgacatgat tggcctggac accatgatgc tggtggccga gacgctgttc gctgagtacg
      181 gcgacgactt ctatctgccg cccccacttc tacgtcgcat ggtcgccgcg ggacacctgg
      241 gccgcaagac cggtcgcggc ttctacgact acagctgacg cgggtgagtt gggtcactgc
      301 ccgccggcgt gtcttcgatg cctagagcca accaggccgc cacgagcccc gctccggccg
      361 ccgccaggtg caacaacagg aaccgggtgc cgctcaggga gtcggccatc agagcggtca
      421 gcacggtgat accgaccgct gcgccgatct gctgaagcat gttcatcgat ccaccggcga
      481 tcccgatgtc ggcgtctccg gcggcagcgg tgaccgagtt ggccaccgta ggccggatgt
      541 aaccgctccc agcgccggcc agcatcgccc cactgaggaa catcggcagc catcgctgct
      601 gggcgcccac cccggcgagc accatggcaa acgcgaatac cagcattccg gtgacagtca
      661 cccgtcgcgc cccatgcttc gggtcgtgat ggccccccag tcgggcgcac aaggcaaacg
      721 acaggggtcg gggaagcatc accagtccaa tgaccgtggg acggaacccc cagcgccgtt
      781 cgaggaggaa cggcgccatg accatggccc ccatgtagcc cgattgcagg accgcctggg
      841 aggtcatggg gcgggtgaag gcccgtcgtc gcaacagtgc cggtggtaga agcggcgcat
      901 tggaccggtt ctcgacggcc acgaacaacc cgaggctgac gggagccgtc atcgcggcga
      961 ctagcacgat cgggttggtc cagccccaac tgatgccccg gttgacggcc agcaggagtc
     1021 cgctgacccc gatcccgagg gtgatggcgc cgggcacgtc gaagcggatg ccggaccgcc
     1081 gcggggtctc cggggcgacg agcagagcgg ccaacagggc caggcccacg gtgaggccct
     1141 gcaccacgaa caggatccgc cagcccaacc actcgacgag cggtccgccg gtgacgacgc
     1201 cgacggctgg tgacagggcg accaccgctg cccagatgcc gagcgcccgg gtccggtcgc
     1261 gctgcgggaa gaccgacagg atcattgcca ttgccgacgg gcctgacgcg gccttggcgg
     1321 cctgagcgag tgtccgcagc acgatcagtg aggtgatgcc ccaggccagc gaggtggcca
     1381 gggccagaac cgtgcccaga gagaaactga ccaggtaggt gcggcggtgg ccgtaaaggt
     1441 cgccgatctt gccgatgatc ggcgtgatca cggcaaaggc cagcatgggt gcggcgatga
     1501 cccaggtgat gatgtcgtcg gtggtgccca gatcccgggc gatgtggggg agtgaggccg
     1561 acagcacggt gaccgggtaa ctgccagctg cggtgccgaa cagggcggtg atgaggacga
     1621 ggcgtcggta gtccggccgt cggcggatcc gctcacgtgt tctggatagc caccgcccgg
     1681 gagggggctc gccggtatcg gcgtgatcgg catggtcgtc catccggatc gaccataggt
     1741 gtgctctctg acggggcccc tagcggaccc gggcatgacc gagtggctac ggtcacctgc
     1801 cgtgatgaac gcgaacacag acgcagcgac cggtaccgac accgcgatcg gcagcgccgg
     1861 atcaccgctc ccgcttcctc tggcggtcgg cctggtggtc aacccccggt cgggcaccga
     1921 cgtgcgacgg gcggtggctg cggctggggc ggtgaccatc gaggacaagg ccaacgtggt
     1981 tcggcgcgtc gtgctggggg cccgggaagc gggggtcgat cggttcgtcg tacacaccga
     2041 cacccatcgg atcgtgcagc gggccaccga gaccatgcgg ggcctcgacc tccactggct
     2101 ggattacgag atgacgttca ccgaggagga cacggtggcc gcggtggccg ctatgcggga
     2161 tctcggctgc ggggtggtcg tagtgctggg tggtgatggg acgaaccggg ccgcagcgcg
     2221 cgcatggccc gatctggtgg tggttccgtt gtcgacgggg acgaacaatg ccttcccggt
     2281 gctcgccgaa gccacgattg ccggggcggc ggctggccac gtggctactg gacgggtgcc
     2341 ggtcgatgag gtgacccggc gggcaatggt ggtgcgggtc cggcccgacg gtgcttcgac
     2401 cccagatgac ctggcgttgg tcgacgcggt ggcggtggac gatccgtatc tgggttcctt
     2461 cgagttgttt gagccggcga acttgcggac tgctgttgta tcgcgagccg atccggcgtc
     2521 agtcggtttc gccggagtgg gtggactggt cgaaccggtg gggttggacg aggatg
//
LOCUS       DASCMR010000354         2212 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001739633, whole genome shotgun sequence.
ACCESSION   DASCMR010000354 DASCMR010000000
VERSION     DASCMR010000354.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2212)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001739633"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(155..1147)
                     /gene="rsmH"
                     /locus_tag="QGG16_08395"
     CDS             complement(155..1147)
                     /gene="rsmH"
                     /locus_tag="QGG16_08395"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: protein motif:HMM:TIGR00006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HJP25332.1"
                     /translation="MTEQFDEELRVESPGSSAFHHVPVMCSEVLEVLMEAPAGVILDA
                     TVGGGGHAEAVLTARPDLTVLGLDRDDAALAATAERLAPFGDRVVLHRSAFGDLSTAL
                     DSVGVERISGFLFDLGVSSPQLDQADRGFSYREAGPLDMRMDRRQELTAAAVVNEYDE
                     ADLARVLRWYADERHARRIARTVVAARPVTDTAQLAELVREAIPAPARRRGGHPAKRT
                     FQAIRIEVNGELDQLAGAIDEAIRRLVISGRGAVLSYHSGEDRIVKHQFDRAATGGCS
                     CPPRLPCVCGAQPTVVMARRAGWTPGDDEATVNPRAVSARLRAVERVERQVATP"
     gene            complement(1455..1880)
                     /locus_tag="QGG16_08400"
     CDS             complement(1455..1880)
                     /locus_tag="QGG16_08400"
                     /inference="COORDINATES: protein motif:HMM:NF014439.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25333.1"
                     /translation="MVFVGTHDHTLDDKGRLVLPARFRSHFAESAYLLPNAGCISLWE
                     PERFEKMIGRLGEQVRAGEIDPLSPKQVAHASSIVRPDAQGRITIPERLRTFASLEHD
                     VMVCGAVESLEIWNAETWAAMSADLDQSVADLFLRGGGI"
BASE COUNT          384 a          737 c          724 g          367 t
ORIGIN      
        1 aatagaccga ccacgccgaa ccgggtccca cccatcgtgc gggctagtcg ctgtcccgcg
       61 agtcgctgcc cggcagtccc atgaggaggt tgtacctcag caacgggccc tatcggagtg
      121 ggccgaggcg tccggaccgg gcgaagtacg gccgtcatgg tgtcgccacc tgacgttcga
      181 cccgttccac agcccgaagt cgggcgctaa cagcacgggg attgacggtg gcctcgtcgt
      241 cacccggcgt ccagccagca cggcgagcca tgacgaccgt cggttgggca ccgcagacgc
      301 aagggaggcg cggagggcag gagcacccac cggtggccgc ccggtcgaat tggtgtttca
      361 cgatccggtc ctcgcccgag tgataggaca ggaccgctcc ccgaccgctg atcaccaggc
      421 gtcgaatcgc ctcgtcgatg gctcccgcca attggtctag ttcaccgttg acctcaatgc
      481 ggatggcctg gaaggtgcgc ttggcgggat ggccaccgcg gcgccgggct ggggccggaa
      541 tcgcctcacg taccagttcg gcgagttggg ccgtgtcggt caccggtcgg gcggcaacca
      601 ccgtccgggc gatccgccgg gcgtgacgtt catcggcgta ccaacggagg acccgggcca
      661 ggtccgcctc gtcgtactca ttgacgaccg ctgcagccgt gagctcctga cggcgatcca
      721 ttcgcatgtc cagcgggccg gcctcccgat agctgaaccc ccggtccgct tggtcaagtt
      781 gcggagagga cacgccaagg tcgaacagga agcccgagat tcgttccacg ccgacggaat
      841 ccagggctgt cgagaggtca ccgaaggccg aacggtgcaa caccacccgg tcaccgaagg
      901 gagcgaggcg ttcagcggtg gcagccagtg cggcgtcgtc acggtcaagg cccagcacag
      961 tcaggtcggg ccgtgcggtg aggacggctt cggcgtggcc tcctccaccg accgtggcat
     1021 ccaggatcac ccctgctggt gcctccatca acacttcaag gacctcggaa cacatcaccg
     1081 gaacgtggtg aaaggccgac gatcctgggc tctcgaccct caactcttca tcgaactgct
     1141 ctgtcatggt ccgggccgca tccgtacctg tccgaccgcc tcggcgcctc ggccccgaag
     1201 ctcgtccctc gaccgtcccc cgatcaggcg gcacccgtcg ggatgtctcc ccgagtcggg
     1261 ctagatggca agcgggcgga gtaggggcct cccatcctgc cgatcggggg acggtccagg
     1321 gacgagccaa acggcgtcgg tcgtcctggt cttcagatcg cgtgggtgct ggtcgtctcc
     1381 tgtgttcggt gtgtcgtgtt cggtgtggtc tccggcctgc tccagtcagg tcgaggcgag
     1441 ccggtgaggg gtgatcagat cccgccgccg cgcaggaata ggtcggccac cgactgatcg
     1501 aggtcggcag acatggccgc ccaggtctcg gcattccaga tctcgaggga ttcgaccgct
     1561 ccgcagacca tgacgtcgtg ctcgagggag gcgaaggtac gcagtcgttc gggaatggtg
     1621 atacgcccct gggcgtcggg ccggacgatg ctcgacgcgt gggccacctg cttaggagag
     1681 agaggatcaa tctcgcccgc tcggacctgc tcaccgagac gaccaatcat cttctcgaag
     1741 cgttcgggct cccagagcga gatacatccg gcgttcggca gcagataggc cgattcggca
     1801 aagtggctgc ggaaccgggc ggggagtacg agtcggccct tgtcgtccag cgtgtggtcg
     1861 tgggttccca cgaagaccat gtcgatgcct cccctctgct cgtccggtgg tgtcgatttc
     1921 cgtggggggg agggaaccgg taccgttcac tgctaggtcc ccactactcc ccacaaggcc
     1981 ccactctaac ccttttccac cccttcaatg caagtagccc ccaccacaaa tcgcgtaatt
     2041 cccatcacag gcgcgcgcgg gccctggacc tgcaggaact gcaccgggag ctcggctcaa
     2101 ccggtggagg aaatggcctc catgaaggcg tcgaaaaggt gatccgccgc gacgacaccc
     2161 gtactgtcga catcggccac gccgggaatc accccaccgg aaacggtggc ct
//
LOCUS       DASCMR010000355         1804 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001740264, whole genome shotgun sequence.
ACCESSION   DASCMR010000355 DASCMR010000000
VERSION     DASCMR010000355.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1804)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1804)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1804
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001740264"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            180..566
                     /locus_tag="QGG16_08405"
     CDS             180..566
                     /locus_tag="QGG16_08405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25334.1"
                     /translation="MPMREDCKHFESRSYPNGDTVRKCNLDLAPEAPWRCPDDCPSFT
                     KRRLDVNWSHGSLVTPETPDEPVGLGDDDSIAALLDAAEDIINEAGPRVMADLDAEKA
                     KKERWRRLKGGGRAGGKPGRKGRRRK"
     gene            738..1763
                     /locus_tag="QGG16_08410"
     CDS             738..1763
                     /locus_tag="QGG16_08410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HJP25335.1"
                     /translation="MESTTLTVNIPGNDLMPDLVGERDVLLRRVEGAFPGSAIHVRGN
                     QITIDGAHAATVGTVFDEMVALLQQGLTIDERTLDRTIDMVRADERPSEVLTTEIFRT
                     SRGKPVRPRSAGQKRYVEAVADGIITFGIGPAGTGKSWLAVAMAIRSLQAGQVDRIVL
                     TRPLVEAGERVGFLPGDLMAKVDPYLRPLYDALFDMVDTETAERLVDRGQVEVAPLAF
                     MRGRTLNNSFIILDEAQNTTPEQMKMFLTRVGFGSRVVVTGDISQVDVPGGRSGLLDL
                     ERMLTGIDGLSFVHLGARDVVRHRIVQDIVEAYEHEAGLREADDRGDGVGAGSEPGDD
                     VSDGSSH"
BASE COUNT          329 a          574 c          613 g          288 t
ORIGIN      
        1 cggcttcatc gaaccagtca cccgaacgtt gcccatggag tacgcggtgg agtggagccg
       61 cctgatcgaa ctgcagatgg agggctcggt cggctgacct actttgttga gggccctcgc
      121 gcctgacggg cggcccctgt tgccgccgat ggtgactccg cacgcgccac actggcgtca
      181 tgccgatgcg tgaggactgc aaacacttcg agagccggag ctaccccaac ggggacacgg
      241 tccggaagtg caaccttgac ctcgctcccg aagccccctg gcggtgcccc gacgactgcc
      301 cgtcgttcac caagcgtcgt ctggacgtca actggagcca cggcagcctc gtgacccctg
      361 agacaccgga cgagccggtc ggtctcggcg atgacgacag catcgcagca ttgctggatg
      421 cggccgagga catcatcaac gaggcgggtc cccgggtgat ggccgacctg gacgccgaaa
      481 aggcgaagaa ggagcgttgg cgtcgcctca agggcggtgg cagggctgga ggcaagcccg
      541 gccgaaaggg tcgccgccgg aagtaacggc cctccatcct gtacgggagg gtgtttcggc
      601 ctgcctggaa acgaccggag ccatctccgc cgcgaaaccc gcagcattac cctcatccac
      661 cgtcatggcc ggagagtggg cccagccgat cggggaactg gtgcgaggat ccggcggcga
      721 taccctgtgg gtctcccatg gagtcgacca cgctcaccgt caacatcccc ggcaacgatc
      781 tgatgccgga cctggtaggg gagcgggacg tcctgctccg ccgggtcgag ggggcgttcc
      841 ccggttcggc cattcatgtc cggggcaacc agatcaccat cgacggagcc cacgcagcca
      901 ccgtcgggac ggtgttcgac gaaatggtgg cattgctcca gcagggcctg accattgacg
      961 agagaacgtt ggaccgcacg atcgacatgg tgcgagctga cgaacggcca tcggaggtcc
     1021 tgaccaccga gatcttccgg acctcacgtg gcaagccggt ccgcccccgg tcggcgggcc
     1081 agaagcgcta cgtcgaggca gtggccgacg gaatcatcac cttcggcatc ggtccggcgg
     1141 gaaccggcaa gagttggttg gccgtcgcca tggcgatccg gtccctccag gcggggcagg
     1201 ttgacaggat cgtcctgacc cgcccactgg tcgaggcagg ggagcgggtg ggcttcctcc
     1261 ccggcgacct gatggccaag gtcgacccct accttcggcc cctctacgac gccctgttcg
     1321 acatggtcga caccgagacg gctgaacgtc tggtggatcg tggacaagtc gaggtggccc
     1381 cgctggcctt catgcgtggc cgcaccctga acaacagctt catcatcctc gacgaggctc
     1441 agaacacaac tcccgaacag atgaagatgt ttctcaccag ggtgggcttc gggtcacggg
     1501 tggtggtgac cggcgacatc agccaggtcg atgtgcccgg tggacggagt gggttgctcg
     1561 acctggaacg gatgctgacc ggaatcgacg gactgtcgtt cgtccatttg ggtgcccgtg
     1621 acgtggtccg ccaccgcatc gtgcaggaca tcgtcgaggc ctatgagcat gaggccggcc
     1681 tgcgagaagc tgacgaccgc ggtgacggag tcggtgcagg ttccgagcca ggagacgacg
     1741 tcagcgacgg gtcgtcccat tgaagagcgg aacccagggt tccggagtgg ccggttcgcc
     1801 gacg
//
LOCUS       DASCMR010000356         2959 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001747773, whole genome shotgun sequence.
ACCESSION   DASCMR010000356 DASCMR010000000
VERSION     DASCMR010000356.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2959)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2959)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2959
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001747773"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..207)
                     /locus_tag="QGG16_08415"
     CDS             complement(<1..207)
                     /locus_tag="QGG16_08415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25336.1"
                     /translation="MTTIDESDVYYAEGEPSGLEELDEAQIRVDLAAAFRLAARFDLH
                     ESVANHFSAAVSPDGKRFLCNPKWR"
     gene            complement(271..1215)
                     /locus_tag="QGG16_08420"
     CDS             complement(271..1215)
                     /locus_tag="QGG16_08420"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP25337.1"
                     /translation="MTESKVLASPEVVVATASGAGPKHRSLRGDVWRQFRRHKGALVG
                     LCAFLFVTVASFVGPYLMPYDAVEIDIKMRNLSPTWSHPLGTDNLGRDMVARSMVGGR
                     ISLLVAITAMALSVFLGTTIGVLAGFFKRLDGVLMRLTDLFLALPVLPLLLVIIMLFR
                     DSLRATFGPEQGIFMLIVFIIGITSWMQTARVVRGAVLTIKEQEFVAAAHSIGTRRRN
                     VIFRHILPNCLSPVMVAAALGMAVAIITESALSFLGLGFPSDFPTWGRLLYDGKDFIN
                     LTPMRVVGPGVLISLTVISVNFIGDGLRDALDPKLRSR"
     gene            complement(1208..2218)
                     /locus_tag="QGG16_08425"
     CDS             complement(1208..2218)
                     /locus_tag="QGG16_08425"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP25338.1"
                     /translation="MLWFIGRRAAIAVPTLVAISFIIFAILDLAPGDPTSHLPLTIPR
                     EVREQIRESMGVNDPFLVKWLLWVKQVMIHEPISLIEQLFNVQIGSGERTRVISWQSR
                     GPVVETIAERLPQTTWVMGLAFVFGILIAVPVGVISAYKQYSVFDQIGTFISMVGYSV
                     PTFFTGLLAIVIFSVKLGWFPSYYDTTLEVTDWSSFVAQIKQIVLPVGVLSMFNAAAL
                     SRFTRSSMLDNLSEDYVRTARSKGLKEKRVLVRHVLRNSLIPVVTLIALQVPGIFAGA
                     LITEQIFRINGIGHLLISSIHGGDIPMVQTLSFLIAALTVLFNLVADVVYGMLDPRIR
                     YD"
     gene            complement(2357..>2959)
                     /locus_tag="QGG16_08430"
     CDS             complement(2357..>2959)
                     /locus_tag="QGG16_08430"
                     /inference="COORDINATES: protein motif:HMM:NF012706.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJP25339.1"
                     /translation="LANQLLDDAGYLDTDGDGVRETPDGMPMKILYQTSTNTVRQATQ
                     ELVKQDWAKIGVDTELRNIDASVFFGGDPGSPDTYGKFYADIEMYTNGAAGVDSQAYM
                     GSWTSSNISGESTNWQGSNVQRFQSDEYDALYAELTQTADIDRRNEITIALNDLVVGN
                     YSIIPLIHRGSVSAASNSLTGYKLNPWDAELWNLEEWARD"
BASE COUNT          612 a          913 c          931 g          503 t
ORIGIN      
        1 ccgccacttc ggattgcaga ggaaccgctt cccgtcgggc gagaccgcag cgctgaagtg
       61 gttggccacc gactcgtgga ggtcgaatcg ggcagccaaa cgaaaggcag ctgccaggtc
      121 gacgcggatc tgagcctcgt cgagttcctc caagcctgac ggttcaccct ccgcgtagta
      181 gacgtcagat tcgtcaatgg tggtcatggc gtcagtctgg tccagttccg ccgtcgatac
      241 gagccccgga tggtccagca gcccagcggc tcaacggcta cggagcttgg gatccagtgc
      301 gtcccgcagg ccgtcgccga tgaagttgac gctgatcacg gtgagtgaga tgagcacccc
      361 cggtccgacg acccgcatcg gggtcaggtt gatgaagtcc ttaccgtcgt acagcagccg
      421 accccacgtc gggaagtccg acgggaaccc gagacccaga aacgacagcg ccgactcggt
      481 gatgatggcg accgccatgc cgagcgccgc ggcgaccatg accgggctga ggcagttggg
      541 gagaatatgg cggaagatca cgttgcggcg ccgggtcccg atgctgtggg cggcggccac
      601 aaactcctgc tccttgatgg tcagcaccgc gccccgtacc acccgggcgg tctgcatcca
      661 gctggtgatg ccgatgatga acacgatgag catgaagatg ccctgttccg gaccgaaggt
      721 ggcccgcaga ctgtcacgga acaacatgat gatgaccagc aaaaggggca gcaccggcag
      781 ggccaggaac agatcggtga ggcgcatgag caccccgtcg agccgcttga agaacccggc
      841 cagaacaccg atcgtggtgc ccaggaagac cgacaacgcc atggccgtga tggccaccag
      901 cagtgaaata cggcccccaa ccatggagcg ggccaccatg tcacggccca gattgtcggt
      961 gcccaacgga tggctccacg tcgggctcaa gtttcgcatc ttgatgtcga tctcgaccgc
     1021 gtcgtagggc atcaggtacg gcccgacgaa gctggccacc gtcacgaaca ggaaggcaca
     1081 caggcctacg agagcgccct tgtgacggcg aaactggcgc cagacgtcgc cgcggagcga
     1141 ccggtgcttg gggcccgctc ccgacgcggt agcgacgacc acctccgggc tcgcgaggac
     1201 cttggactca gtcataacgg atcctcgggt cgagcatccc gtagaccaca tcggcgacga
     1261 ggttgaacag caccgtgagt gcggcgatca ggaaggacag cgtctggacc atcggaatgt
     1321 caccaccgtg gatcgagctg atcagcaggt ggccaatgcc gttgatccgg aagatctgtt
     1381 cggtgatgag ggcgccggcg aagatccccg gcacctgcag ggcgatcagg gtgacaaccg
     1441 ggatgaggct gttgcgcaac acgtggcgca ccaagacccg cttctccttg aggcccttgg
     1501 atcgagctgt ccggacgtag tcctccgaga ggttgtccag catcgacgac cgggtgaatc
     1561 ggcttagggc cgcggcgttg aacattgaga gcacgcccac tgggagcacg atctgtttga
     1621 tctgggccac aaacgaactc cagtcggtga cctcgagcgt cgtgtcgtag tacgacggga
     1681 accagcccag cttcacgctg aagatgacaa tggccaacag gccggtgaag aaggtcggca
     1741 ccgagtagcc caccatcgag atgaaggtgc cgatctggtc gaacaccgag tactgcttgt
     1801 aggccgagat gacgccaacc ggcacggcaa tgaggatccc gaacacgaag gccaggccca
     1861 tcacccatgt ggtctgggga agacgctccg caatggtctc gaccaccgga cctcgtgact
     1921 gccaggagat gacccgggtc cgctcgccgc tgccgatctg gacgttgaac agctgttcga
     1981 tcaggctgat tggctcgtgg atcatgacct gcttgaccca caggagccac ttgaccagga
     2041 acgggtcgtt gacccccatg gactcgcgga tctgttcccg aacctctcgg gggatggtta
     2101 gcggcaggtg ggaagttgga tcgccgggcg ccagatcaag gatggcgaaa atgatgaagc
     2161 tgatggcaac cagcgtcggc acggcaatcg ccgctcggcg accgataaac cagagcatct
     2221 ccctccccct ctctcgccta gcgggccgaa atcatgaggc gggatcccgc cgaaaacgaa
     2281 cccgaccgga ggggcccgcg gcacagtatg ccgcgggccc ctccggtctg acggttctca
     2341 gatcaggtca ggacgattag tcccgagccc actcctccaa gttccacaac tctgcatccc
     2401 atgggttgag cttgtacccg gtcagcgagt tggacgctgc cgagacgctg ccccggtgga
     2461 tcaacggaat gatcgagtag ttgccaacca ccaagtcgtt cagggcaatg gtgatctcgt
     2521 tacggcgatc gatatccgcg gtctgggtca gctcggcgta cagagcgtca tactcgtcgc
     2581 tctggaagcg ctgaacattg ctgccctgcc aattggtgct ctcgccgctg atgttcgacg
     2641 aggtccaact gcccatgtag gcctgcgaat ccacaccagc tgcaccgttg gtgtacatct
     2701 cgatgtcggc gtagaacttg ccgtaggtgt ccgggctacc cggatcgcca ccgaagaaca
     2761 ccgaagcatc aatgtttcga agttcggtat ccacaccgat cttggcccag tcctgcttga
     2821 cgagctcctg ggtggcctga cgcaccgtgt tggtggacgt ctggtacagg atcttcatcg
     2881 gcatgccgtc gggcgtctcg cgcaccccat caccatcggt gtcgaggtag ccagcatcgt
     2941 ccaacaactg gttggccag
//
LOCUS       DASCMR010000357         4411 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001749578, whole genome shotgun sequence.
ACCESSION   DASCMR010000357 DASCMR010000000
VERSION     DASCMR010000357.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4411)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4411)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4411
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001749578"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(59..1897)
                     /locus_tag="QGG16_08435"
     CDS             complement(59..1897)
                     /locus_tag="QGG16_08435"
                     /inference="COORDINATES: protein motif:HMM:NF013200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HJP25340.1"
                     /translation="MTDRPPRPLRIAALVKQIPKFQEMRLGDDGRLVRDGLELHMNDY
                     CRRGVRAGCDLAEATGGTCTAITLGPDAAETVLREAILCGCIEGIHVTGSAFAGSDTL
                     ATSRAVVAALEATGPWDLVLCGRNSVDADTGQVPAQVAELLGFPLLVGARELDLTSGP
                     GKSVRGLAALLEHDDEWLRAEVDLPAVVSCAERLCDPCKVKEPEAWATVDGALIRRLG
                     PADLGPGPWGAAASPTVVGEVRLLDVERAGETLTGADKTHLDRVLEVVRSGGAIWGSK
                     DAGGEVARPSGPGDGGEIVVVGEPGRERSTSELLGAAASLADTIGGRTVLTIDVVHDW
                     EALSGQGADRVLRHAGVTGADEVARMLTRSLVEDPPWAVLAPSTAWGREVAARLAICL
                     NAGLTGDAVGLEVRDRRLIALKPAFGGRLVAEITCTSTVQMATVRSGILPTLRPRPGA
                     PFAADHLGSPAREPARKSGHGGPADRLVRILERRRDDDSGLLANADVVISVGQGVEPS
                     ELSHVERLAGRLGAELCATRKVTDAGWMPRARQVGITGHAIAPRLCIAIGTSGKFNHT
                     VGLRGATTVVGINPDPECELWNWCDVGLIADWRDALEPLIDRLVAD"
     gene            1935..2411
                     /locus_tag="QGG16_08440"
     CDS             1935..2411
                     /locus_tag="QGG16_08440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25341.1"
                     /translation="MASFDTETFLVDSTDPTDLVDVLDEVAGSPGSWINVEPDVDDSL
                     RADVPGLFAWFSARGSQVPVATFVAGSGRNVPSVGLDHSTGRGAGDRLRDAGVIAPEG
                     WLLRQDNPKRGLIWESGSSDAPTGPSLAVFLMEATALFCPLPTEGRFRVLVHTPLN"
     gene            complement(2447..3436)
                     /locus_tag="QGG16_08445"
     CDS             complement(2447..3436)
                     /locus_tag="QGG16_08445"
                     /inference="COORDINATES: protein motif:HMM:NF013335.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside hydrolase"
                     /protein_id="HJP25342.1"
                     /translation="MPKQFPDNATSTNPASEAFSPGKRPRIILDCDPGVDDAMAIIAA
                     ARWADLVGITTVAGNVELEYTTANACRMRELLGLDVEVHTGAGGPLVGAQEFAHEVHG
                     ATGLGSLVLPEPTRGADSDDAVGWLVETTRAEEGLHLVPIGPLTNVALALRADPGMVE
                     RVASITLMGGAALSVGNVTAAAEFNVYADPEAADEVFRSGAPLTMVGLNLTHQVRMGS
                     AHGRMCATFGTPVGDAMAELLEFYTTFHVAEEETEDGPVHDPCAILAVTHPHLFEMAS
                     RPVSVEVNGTHTRGMTVVDERGPRAEMPFNCDVAYDADTEALIGLMMQAVRDA"
     gene            complement(3475..>4411)
                     /locus_tag="QGG16_08450"
     CDS             complement(3475..>4411)
                     /locus_tag="QGG16_08450"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: protein motif:HMM:NF012515.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019200 - carbohydrate kinase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HJP25343.1"
                     /translation="DAMLSDMSSPRVVVVGSVNLDIVVPVPHHPMTGETVMGGDHALV
                     PGGKGANQAVAASRQGAAVTFLGRVGSDDTGATLKASLEASGVDTSHLTVDAGAPSGI
                     ALIGVDADGDNAIVVSPGANAHVSSSDLDGASAVLADAEVVLLQLEIPAETVTDAALA
                     AGGTVVLNPAPAPSTPGALPVALVDRVNVLVPNFIELAQLTGSEPSDDVDDLTVAARG
                     LGIETVVVTRGADGALIVTIDEAIEVPAPTITPVDTTGAGDSFCGTLAAALARGVTVV
                     EAVHEAVHAGSIAATRPGAQPSMPTAAEVARSMGA"
BASE COUNT          709 a         1525 c         1453 g          724 t
ORIGIN      
        1 atcgacctga ttgattggtg tgcccggcct cactggttca cgccgaggag ctgaccgtct
       61 agtcggcgac cagtcggtcg attagtggtt cgagggcgtc acgccaatcg gcgatcaggc
      121 ccacgtcgca ccagttccat agctcgcatt ccgggtcagg gttaatgccc accaccgtgg
      181 tggccccccg gagcccgacc gtgtgattga acttcccgga tgtcccgatg gcgatacaca
      241 gtcggggggc aatggcatgc ccggtgatgc ccacctgacg ggcccgaggc atccatccgg
      301 catcggtgac ctttcgtgtg gcgcacagtt cggcacccag ccgccctgcc agtctctcca
      361 cgtgggacaa ctccgagggc tcgacgccct gtcccacact gatcaccacg tcggcgttgg
      421 ccaacaggcc gctgtcatcg tcgcggcgac gctccaagat ccgtaccagt cgatcggctg
      481 gccctccgtg ccctgacttt cgtgccggct cccgtgccgg tgacccgaga tggtccgcgg
      541 cgaatggggc cccgggccga ggccgcagcg tgggcaagat gccggagcgg acggtcgcca
      601 tctggacggt cgaggtgcag gtgatctcgg ctaccagacg gccaccgaag gcgggcttca
      661 gcgcgatcag acgtctgtca cgtacctcga gccccacggc atcgccggtt aggccggcat
      721 tcaggcagat ggccagacgc gccgccacct cgcgacccca ggccgtcgac ggtgccagta
      781 cggcccacgg cgggtcctcc accagtgatc tggtcagcat ccgggccacc tcgtcggcgc
      841 cggtcacccc agcatggcga agcacccgat ctgcgccctg gccgctgagg gcctcccagt
      901 cgtggaccac gtcgatggtc agcaccgtcc tgccgccgat ggtgtcggcc aggctggcgg
      961 ccgctcccag aagttcggag gtcgaacgct ctcgtccggg ttcgccgacc accacgatct
     1021 cgccaccgtc gcctggacca gacggtcgtg ccacctctcc gccagcgtct ttagaccccc
     1081 agatggcgcc accggaccgg accacttcga gcacccggtc cagatgggtc ttgtcggcgc
     1141 cggtgagcgt ctcaccagcc cgttcaacgt cgagtaaccg cacctcaccg accaccgtcg
     1201 gactggctgc cgcaccccaa ggtccggggc ccagatcggc gggtccgagg cggcggatga
     1261 gagcaccgtc cacggtggcc cacgcctcag gctccttcac cttgcacggg tcgcacaaac
     1321 gctcggcgca cgagaccacg gccggcaggt cgacctcggc acgtagccac tcgtcatcgt
     1381 gttccagtaa ggctgccagc ccccggacgg acttccccgg gccggatgtc aagtccagtt
     1441 cccgggcacc caccaacagg ggaaaaccca gaagttccgc cacctgggcg ggcacctggc
     1501 cggtgtcggc gtcgaccgag ttacgaccgc acaggacgag gtcccacggt ccggtggcct
     1561 ccagggcggc gaccacggct ctggaggtgg ccagggtgtc gctcccggcg aacgccgagc
     1621 cggtcacgtg gatcccctcg atgcagccac acaggatggc ttcccgtagc acggtctcgg
     1681 cggcgtcggg accgagagtg atcgccgtgc acgtgccgcc ggtggcctcg gccagatcac
     1741 aacccgcccg aaccccacgt cggcagtagt cgttcatgtg gagttcgaga ccgtcgcgca
     1801 ccagacggcc gtcgtcgccc aggcgcatct cctggaattt cggaatctgt ttgactaggg
     1861 cggctatccg caacggacga ggcggccggt cggtcaccgc gccaccgtac cggtgacacc
     1921 actagcgtcg ggacgtggcc agcttcgaca ccgaaacgtt ccttgtcgat tccaccgacc
     1981 cgaccgatct ggtcgacgtg ctagatgagg tggctggctc gcccggttcg tggatcaacg
     2041 tggaacctga cgtggacgac tcgctccgag ccgacgtgcc gggcctcttc gcatggttct
     2101 cggcccgagg ctctcaggtt ccggtggcga cgttcgtagc cggttccggt cggaacgttc
     2161 cgtccgtcgg gctcgaccac agcaccggtc ggggcgccgg tgaccgtcta cgagacgccg
     2221 gcgttatcgc tcctgaaggc tggttgctcc gccaggacaa ccccaagcgg ggcctcatct
     2281 gggagtccgg ttcatcagac gcgcccacag gcccgtcgtt ggccgtgttc ctgatggagg
     2341 ccacggcgct cttctgcccg ttacccaccg agggccgatt ccgggttctg gtgcacacgc
     2401 cactgaactg aagcccaaga actgaggccc gaaaaaaccg cccggatcag gcgtcccgaa
     2461 ccgcctgcat catcaggccg atgagtgcct cggtatcggc gtcgtaggcc acatcgcagt
     2521 tgaacggcat ctcggcgcgg ggaccgcgct cgtcgaccac agtcatgccc cgggtgtggg
     2581 tgccgttgac ttccacgctc accgggcggg atgccatctc gaacaggtgg gggtgggtga
     2641 cggccaggat ggcgcacggg tcgtggaccg gcccatcctc ggtttcctcc tcggccacgt
     2701 ggaacgtcgt gtagaactcg agtagttcgg ccatggcgtc acctaccggt gttccgaagg
     2761 tcgcgcacat ccgaccgtgg gcactgccca tacggacctg atgggtgagg ttgaggccca
     2821 ccatggtcag cggagcaccg gaccggaaga cttcatcggc cgcctcaggg tcggcgtata
     2881 cgttgaactc ggcggccgcc gtcacattgc cgacgcttag ggcggcccct cccatcaagg
     2941 tgatggaagc cacccgctca accatgcctg gatcggcccg gagggccaga gccacgttgg
     3001 tcagagggcc gatgggcacc agatgtagac cttcttcggc acgggtcgtc tcgaccagcc
     3061 aaccgacagc gtcatcggag tcggcacccc tggtcggctc ggggagcacg aggctcccga
     3121 ggcccgtcgc cccgtggacc tcgtgggcga actcctgggc accgaccagc ggtcctccag
     3181 cgcctgtatg gacttcaacg tcgaggccca gcagttcacg catccgacag gcgttagctg
     3241 tggtgtattc caactcgacg ttgccggcca ccgtggtgat gcccaccagg tcggcccagc
     3301 gggccgcggc gatgatggcc atggcgtcgt ccactccggg gtcacagtcc aagatgatgc
     3361 gaggccgttt acccggtgag aacgcctcag aagccggatt cgtcgaggtt gcgttgtctg
     3421 ggaactgttt cggcatggcc ggagtgtgcc ccgtcaggag gtgggtttgt tggattaggc
     3481 gcccatcgag cgggccacct cggcggccgt gggcatcgac ggctgggcgc ccgggcgcgt
     3541 cgccgcgatg gatccggcat gaaccgcttc gtggacggcc tcgacgacgg tcactccgcg
     3601 ggccagcgcc gcggcgagcg ttccgcagaa cgagtcaccg gccccggtgg tgtccaccgg
     3661 ggtgatggtt ggagcgggca cttctatcgc ctcgtcgatg gtgacgatca gggcgccgtc
     3721 agccccgcgg gttaccacaa cggtttcgat gcccaggcca cgggccgcca ccgtgaggtc
     3781 gtcgacgtca tcggacggtt cggatcccgt cagctgggcc agctcgatga agttggggac
     3841 cagcacgttc acccgatcca cgagtgcgac ggggagcgcc ccgggggtcg acggggccgg
     3901 cgccgggttc agcaccacgg tcccgccagc ggctaatgca gcatcggtca cggtttccgc
     3961 cggaatctcc agctggagca gaaccacctc agcgtcggcc agcacggccg acgcaccgtc
     4021 gaggtccgat gagctcacgt gggcattagc gcccgggctc accacgatgg cgttgtcccc
     4081 gtcggcgtcc accccgatca gggcgatccc gctgggggct ccggcatcga ccgtcagatg
     4141 gctggtgtcc acgcctgacg cctcgagcga tgccttcaga gtggcgccgg tgtcatcgga
     4201 tcccacgcga cccaaaaagg tcaccgccgc tccctgtcgt gaggcggcca ccgcctgatt
     4261 ggctcccttg cctcccggaa cgagggcgtg gtcgccgccc atcaccgtct cgccggtcat
     4321 cgggtggtgg gggaccggta cgacgatgtc gaggttgact gaaccgacca cgacgacacg
     4381 gggggaagac atgtctgaga gcatggcatc c
//
LOCUS       DASCMR010000358         3574 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001753894, whole genome shotgun sequence.
ACCESSION   DASCMR010000358 DASCMR010000000
VERSION     DASCMR010000358.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3574)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3574)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3574
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001753894"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(628..1755)
                     /gene="nusA"
                     /locus_tag="QGG16_08455"
     CDS             complement(628..1755)
                     /gene="nusA"
                     /locus_tag="QGG16_08455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HJP25344.1"
                     /translation="MNPDMMEALQALAMERGISIDALFAALADALESAYKRMPGAHEF
                     SWVTIDPDTMEIRVLAQDLDEEGEPAGEEFDVTPDGFGRIAAQTARQVMGQRIREAER
                     DLKYEEYAGREGDIVTGMIQQTDARYTLLDLGRVEALLPQAEQVPFERPEANARLKAY
                     IVEVRKTAKGPQIVVSRTHPGLIKRLFELEVPEIADGVVEIRACAREPGHRTKIAVWS
                     NDGNVDPVGACVGARGARVRMVVNELRGEKIDIVPFSEDPADFVMKGLSPAKVKEVLI
                     DEETGTATVIVPDYQLSLAIGKEGQNARLAARMTGWRVDIKSETQVAQEAAYVDVEWA
                     EGEWIVDDATGEQVWKPAEGGPAVSAGEWTEAATDSGEEEE"
     gene            complement(1752..2270)
                     /gene="rimP"
                     /locus_tag="QGG16_08460"
     CDS             complement(1752..2270)
                     /gene="rimP"
                     /locus_tag="QGG16_08460"
                     /inference="COORDINATES: protein motif:HMM:NF014617.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000028 - ribosomal small subunit assembly
                     [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0042274 - ribosomal small subunit
                     biogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HJP25345.1"
                     /translation="MAVTDRIDALAAPLCDRVGVELLDVEYEGGVVRLVVDHADGVGM
                     DAIASVTREMSRALDHEDPISGTYTLEVTSPGLERPLKRPEHFIRSLGAEVTIKTAPG
                     VDGDRRIAGVLAAADKDGIVVRAEGGDERSLRHDEILKARTVFTWTPESKSARKGDDR
                     SAEAAPGRKVGS"
     gene            complement(2526..>3574)
                     /gene="ispG"
                     /locus_tag="QGG16_08465"
                     /gene_synonym="gcpE"
     CDS             complement(2526..>3574)
                     /gene="ispG"
                     /locus_tag="QGG16_08465"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HJP25346.1"
                     /translation="CTCNELEAAEGLARIVPRSPVPIVADIHHQYRMALAALEAGVHC
                     LRLNPGNIRKPEHIRTVAAEARDRGVPIRIGVNGGSLHPDLYAKYGGKVTAEAMVESA
                     LDEIRYFEDVDFNLIKISVKASSVPLMVEAYHQLSEVTDYPLHLGVTEAGPPPAGLIK
                     SSAGIGALLAQGIGDTIRYSLTADPVEEARAGRTLLEAMGLRERKNVDLIACPSCGRA
                     EIDVVAVAEEAMAAFADREIPLQVAVMGCVVNGPGEARDADLGIAAGNRRGHLFIKGR
                     NAAVVREDEMVDALVEWAVLIHEEGAEAALARVDTEKARREAEKDRDRLLAEQGDDAN
                     DAGTKIELIRRHTS"
BASE COUNT          594 a         1236 c         1102 g          642 t
ORIGIN      
        1 ggtcggcctg cgcctcgaca aaaccggagg aatggctctt caccccaatg ccgagtgact
       61 cgcagaggtc caggacctcg gcgttggtca ttcccagctc tcgcgccaat tcatagacgc
      121 ggatgttctt cggcacgagg cttcgacgtc ctgttctctc tcggggtcct ctggggggta
      181 tttcgtggta gcccatcagg gctaccacgg ggccccgttg tcggggagcc gctgcctgac
      241 gctatcggtt ggtggggtgg atcacccgtc cccggaccgc ctggatgccg ttgatttcaa
      301 cggcgacgct gccgggacgc tctccgaccg gccaaccaga ggaggaacca gttgggtgac
      361 cagcccagcg acctgtgttg acgtcacggt ccgccggaac gccctcgtca ggtcggccgg
      421 acaaagggcc tgcaggcaac ccgacacggg atgcacccag gcgccgcgtc caggcaacgt
      481 ccgaccaacc gccggtccgg ccatctcgac cgaccagccg atccggagca actcggaagc
      541 cggcaccgag gatcgacatg ccacgcacct ccgtcgggga actgatgccg aggtgtcggc
      601 atcagtcaag cggcccaccg ccggcgccta ctcctcttcc tctccggaat cggttgccgc
      661 ctcggtccac tcaccggccg aaacggccgg gccgccctca gcgggcttcc agacctgttc
      721 accggtcgcg tcatcgacga tccactcacc ctcagcccac tccacgtcga cataggcagc
      781 ttcctgagcg acctgggtct cgctcttgat gtcgacgcgc caaccggtca tccgggcggc
      841 cagacgcgcg ttctggccct ccttgccgat ggcgagggac aactggtagt cgggcacgat
      901 caccgtggcg gtgccggtct cctcgtcgat gaggacttcc ttcaccttgg caggtgacag
      961 gcccttcatg acgaagtcgg ctggatcctc agagaacggg acgatgtcga tcttctcgcc
     1021 acgcagctcg ttgacaacca ttcgaacccg ggctccacgg gcgccgacgc aggcgccgac
     1081 cggatcaacg tttccgtcgt tggaccacac cgcgatcttg gttcgatgtc ctggctcacg
     1141 ggcacatgca cggatctcga ccacgccgtc tgcgatctcg ggaacctcga gttcgaagag
     1201 gcgcttgatg agacccgggt gcgtcctact cacgacgatc tgggggccct tggccgtctt
     1261 gcggacctcg acgatgtacg ccttcaggcg agcgttggct tcgggtcgct caaatggcac
     1321 ctgctcggcc tgaggcagta gtgcttcgac ccggcccagg tccagcaggg tgtaacgggc
     1381 gtcggtctgc tggatcatgc cggtgacgat gtcgccctcg cggcctgcgt actcctcgta
     1441 cttgaggtca cgctcggcct cgcggatccg ctgacccatg acctggcggg ctgtctgagc
     1501 ggcgatacgg ccgaagccgt caggggtgac gtcgaactcc tcgcccgccg gctcgccctc
     1561 ctcgtcgaga tcctgagcca gaacacggat ctccatggtg tccgggtcga tggtcaccca
     1621 tgagaactcg tgggctccag gcatccgctt gtaggccgat tccagtgcgt cggccagcgc
     1681 ggcgaacaag gcgtcgatcg agatgccccg ttccatcgcc agggcctgca gggcctccat
     1741 catgtcgggg ttcatgaccc aaccttcctt cccggagcag cctcggcgct ccgatcatct
     1801 ccctttcgag ccgacttcga ctctggggtc caggtgaaga cggtgcgcgc cttcaagatc
     1861 tcgtcatgtc ggagcgaccg ctcatcccca ccttcggccc gaacgacaat gccgtccttg
     1921 tcggcagcag cgagcacgcc ggcgatccga cggtcaccgt ccacgccagg agcggtcttg
     1981 atggtgacct cggcgcccaa cgaacggatg aagtgctcgg gacgcttgag gggccgctcg
     2041 agccccgggc tggtcacctc cagggtgtag gtgcccgaga tcgggtcctc atgatcgagg
     2101 gcccgggaca tttcgcgcgt cacgctggca atagcgtcca tgccgactcc gtcggcatgg
     2161 tcgaccacca agcgcaccac gccgccctcg tactccacgt ccagaagttc gacgccgaca
     2221 cggtcgcaca ggggagcggc cagcgcatcg atccgatcgg tcactgccat ttcgccctcc
     2281 ctgttttccg gtgcccacca aagtggtgta cacgattttt cggtgtccac cctgcggtgg
     2341 gcactcctcg gttgtcggcg gtacaactgt cagcaccgaa aacaaaaggc gtgggcagag
     2401 cccacgcctc gtcggaaacc ggcgatgcac gcaccggaaa tcataccgtc gagccgctcg
     2461 gacaccgagg gcgccgctgc tgcgccagta acggggcggt cacgccctcg tcaaagccgt
     2521 cggcctcaac tggtgtgacg gcggatgagc tcgatcttgg tgccggcatc attcgcgtcg
     2581 tcaccctgct ctgccagcag tcggtcacga tccttttcgg cctcgcgtcg ggccttctca
     2641 gtatcgacgc gtgctagcgc cgcctcggcg ccctcctcgt ggatcaacac ggcccactcg
     2701 actagggcgt cgaccatctc atcttcccgg accaccgcgg cattgcgacc cttgatgaac
     2761 aggtggcccc gccggttccc tgcggcgatt cccaggtcgg cgtcacgtgc ctctcccggc
     2821 ccattaacca cgcagcccat gacggccacc tgtaacggga tctcgcgatc agcgaaggcc
     2881 gccatcgcct cctcggcaac cgctaccacg tcgatctcgg cccggccgca actggggcaa
     2941 gcaatcaggt cgacattctt tcgctcgcgc aggcccatgg cctccaacag ggttcgcccg
     3001 gctctggcct cctcgaccgg atcggcagtg agcgagtacc ggatggtgtc gccaatcccc
     3061 tgggccagca gggcaccaat tcccgctgaa gacttgatga gtccggccgg cggcggtcca
     3121 gcctcggtca ccccgagatg gagcggatag tcggtgacct ccgagagttg gtggtaggcc
     3181 tcgaccatca acggaacgct ggatgccttg accgagatct tgatgaggtt gaagtcaacg
     3241 tcctcgaagt agcggatctc gtcgagggcc gactcgacca tggcctcggc ggtcaccttc
     3301 ccgccgtact tcgcgtagag gtcggggtgc aacgaaccac cattgacccc gattcggatg
     3361 gggacgccac ggtcgcgggc ctcggcagcc accgtccgga tgtgttcggg cttacggata
     3421 ttgcccggat tgaggcggag gcagtgcaca ccggcctcca acgcagcgag ggccatccgg
     3481 tactgatggt ggatgtcggc cacgatgggt accggcgacc ggggcacgat ccgggccagg
     3541 ccctcggcgg cctccagttc attgcaggta cacc
//
LOCUS       DASCMR010000359         2548 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001762180, whole genome shotgun sequence.
ACCESSION   DASCMR010000359 DASCMR010000000
VERSION     DASCMR010000359.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2548)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2548)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2548
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001762180"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..867)
                     /locus_tag="QGG16_08470"
     CDS             complement(<1..867)
                     /locus_tag="QGG16_08470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HJP25347.1"
                     /translation="MGADANRPLAGVKVVESSLLGPGLVTTFLADLGADVIKVEPPAG
                     DYVRQMTWPIIEGNSLLHLHTHRGKRSICLDLKTEDGLEIYRDLVRNADVVVEAMRPG
                     SLAKLGLGFEDLQAVNPRIVFCTLSGYGATGPYRDMPSHGIAYDTWAGLIEPVVDDEG
                     FTRIPVLPNVGINVGPMVAALGILAAVISARETGEGTSLEVAQSDAAAYMDWYRIETY
                     KAYERPADVVTGNAADDYERREPGLAGMWEGVRYQIYEASDGHVLFMASEQAFWRNFC
                     EGVDRMDMFERWP"
     gene            983..>2548
                     /locus_tag="QGG16_08475"
     CDS             983..>2548
                     /locus_tag="QGG16_08475"
                     /inference="COORDINATES: protein motif:HMM:NF012869.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJP25348.1"
                     /translation="MANAMHLLHVMSHQSDAPQTIGSDTRRRVWGYARPYRSKVAGFL
                     AVVTASSLLGVVPPLLFREIIDGAIVAGDRDRLTVLGLLVVAAALAQAALAFVERWAS
                     ATVGEGLIFDLRVSLFDHVQRLPISFFTRTQTGALVSRLNNDVIGAQRALTGTLGTVV
                     SNAITAATTLLTLFLLEWRVTLLAMVLLPLFILPARRVGRTVADITREGMNLNASMNV
                     TMTERFNVSGAQLVKLFGRPSEETDGFARRAGRVRDIGIRNALFSRAFVIALTLLGAT
                     GTAIVYWVGGSLAISGSITIGTLASMGVLVAQLYGPLAQLTNARVDVMSAFVSFERVF
                     EVLDAPNPVADSPDAHPLPAEAATGHLAFHDVSFRYPAADDTSVASLETDATPDEPGR
                     IVLDGIDLTVGPGQMLAIVGPSGSGKSTLASLVPRLYDVTDGSITLDGHDLRTLFQEE
                     LRSRIGMVTQDPHLFHDTVGANLRYARPGATDADLDEACRAARILDVVRRLPDGYETV
                     VGERGHRMSGGEKQ"
BASE COUNT          383 a          915 c          823 g          427 t
ORIGIN      
        1 gggccaccgc tcgaacatgt ccatgcggtc caccccctcg cagaagttgc gccagaaggc
       61 ctgctcggag gccatgaaca gcacgtggcc gtcggacgcc tcgtagatct ggtagcggac
      121 gccctcccac atgccggcca ggccgggctc gcgccgctcg tagtcgtcgg cggcgttgcc
      181 ggtcaccacg tcggccggac gttcgtaggc cttgtaggtc tcgatgcggt accagtccat
      241 gtaggcggcg gcatcggact gggccacctc cagggacgtg ccctcaccgg tctcccgggc
      301 gctgatgacg gcggcgagga tgcccagggc ggccaccatc gggccgacgt tgatgcccac
      361 gttgggcagc acggggatgc gggtgaaccc ctcgtcgtcg accaccggct cgatcaggcc
      421 ggcccacgtg tcgtaggcga tgccgtggct gggcatgtct cggtacggac cggtggcgcc
      481 gtagccggac agggtgcaga acacgatccg tgggttgacc gcctggagat cctcgaagcc
      541 caggccaagc ttggccagcg accccggacg catggcctcc acgaccacgt cggcattccg
      601 gaccaggtcg cggtagatct ccaggccgtc ctcggtcttg agatccaagc agatgctccg
      661 cttgccacgg tgggtgtgga ggtggagcag cgaattgccc tcgatgatgg gccaagtcat
      721 ctgccggacg tagtcgccgg ccggcggttc gacctttatc acgtcggccc caaggtcggc
      781 caagaacgtg gtcaccagac ccggtccgag cagggaactc tccaccacct tgactccggc
      841 cagtggccgg ttggcgtctg cgcccacgat cgtgctgcct ctccggccgt tgttcgaccc
      901 tggtgcctgg cccgggggga caggtcaaat ctgacagacc gtcagattac ccgccccgag
      961 cccgactccg taggctcggg cgatggccaa cgcgatgcac ctactccacg tgatgtcgca
     1021 ccagtcagac gccccacaga cgatcggtag cgacacgcgc cgcagggttt ggggctacgc
     1081 ccgtccctac cggtccaagg tggccggctt cctggccgtg gtcaccgcct cgtcactcct
     1141 cggcgtggtg ccacccctcc tcttccggga gatcatcgac ggagccatcg tggccggcga
     1201 ccgcgaccgc ctcaccgtgc tcggcctcct ggtggtagcc gctgcgctgg cccaagccgc
     1261 cttggccttc gtggagcggt gggcttcggc caccgtcggc gagggcctta tcttcgacct
     1321 gcgggtctcc ctgttcgacc acgtacagcg gctgcccatc tcgttcttca cccgcaccca
     1381 gaccggggcg ctggtcagcc gcctcaacaa cgacgtgatc ggtgcccagc gggcgctcac
     1441 cggcacgctg ggcaccgtgg tctccaacgc catcacggcg gccaccaccc tgctcaccct
     1501 gttcctgctg gagtggcggg tcaccctgct ggccatggtg ctgctgccgt tgttcatcct
     1561 cccggctcgc cgggtcgggc gcacggtggc cgacatcacc cgggagggca tgaacctcaa
     1621 cgcctcgatg aacgtcacca tgaccgaacg gttcaacgtg tcgggtgccc aactggtcaa
     1681 gctgttcggg cgccccagcg aggagaccga cgggttcgcc agacgagccg gacgggtgcg
     1741 cgacatcggc atccgcaacg ccctgttcag ccgggccttc gtcatcgccc tgaccctgct
     1801 gggagccacc ggcacggcca tcgtctactg ggtgggcggc tcgctggcca tcagcggctc
     1861 catcaccatc gggaccctgg catccatggg cgtgctggtg gcccagctct acgggccgct
     1921 ggcacagttg accaatgccc gggtggacgt catgtcggcc ttcgtgtcct ttgaacgggt
     1981 cttcgaggtg ctcgacgccc cgaacccggt ggccgactca cccgatgccc atccactgcc
     2041 cgccgaagcg gccacggggc acctggcctt ccacgacgtg tcgttccgct acccagctgc
     2101 tgacgacacc tcggtggcct cgctggagac agatgccacc cccgacgagc cgggccggat
     2161 cgtgctcgac ggcatcgacc tgaccgtcgg cccgggccag atgctggcca ttgttggccc
     2221 gtccggatcc ggcaagtcca ccctggcctc tctcgtcccc cggctctacg acgtgaccga
     2281 cggatcgatc accctcgacg gtcacgacct acgcacgttg tttcaggaag agttgcggtc
     2341 ccgtatcggc atggtcaccc aggacccgca cctgttccac gacacggtgg gcgccaacct
     2401 gcgctacgcc cgtcccgggg ccaccgacgc cgacctggat gaggcttgtc gggcggcccg
     2461 catcctcgac gtggttcgac gactgccgga cggctacgaa acggtggtcg gcgaacgagg
     2521 ccaccggatg tcgggtggcg agaagcag
//
LOCUS       DASCMR010000360         1722 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001769510, whole genome shotgun sequence.
ACCESSION   DASCMR010000360 DASCMR010000000
VERSION     DASCMR010000360.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1722)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1722)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1722
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001769510"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..769
                     /locus_tag="QGG16_08480"
     CDS             <1..769
                     /locus_tag="QGG16_08480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HJP25349.1"
                     /translation="VEGPAGTGKTQLAKSVAEITGSRLIRLQCYEGLDESKALYEWNY
                     KKQLLRIQAEGTDAAWNDVEDDLFSEEFLLTRPLLEAIRAEDRVVLLIDEVDRVEVET
                     EALLLEILSEYQVSIPELGTVQSTQIPMVFLTSNGTRELSEALKRRCLYLYIDYPDLD
                     RERQIVTAKVPGIDANLADQVARIVRSIRQLDLKKDPSVSETLDWARTLVLLGVEQID
                     AAVATETANVLLKYRTDIEKAVKEFADNPDELAGPVG"
     gene            788..>1722
                     /locus_tag="QGG16_08485"
     CDS             788..>1722
                     /locus_tag="QGG16_08485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25350.1"
                     /translation="MTIASTSIDGAPIAAGDRPLLDLLSGFIEELRNAGLPVSLTENL
                     DAMEAVTHIPLEDREAFKYALGATLVKNHSHWRAFEVVFEVYFSLRGPEYEIVDGDPS
                     ADSGESDDDQLQMPGEGQAGGGGGGGMSALTPEQLAEMLFKALMQGDDAMLRALARQS
                     VMRFAGMEPGRPVGGTYYLYRTLRNLDLAGMLDRLMEATREDAPEDLTPLEERLERDE
                     FNDRMDRLKQEIEAEIRRRLVADRGVEAMAKTLRKPLPEDVDFMHASREEMANLRKAI
                     YPLTRKLAVRLARKRRHGRKGPLDFRNTMRHSLSYG"
BASE COUNT          336 a          530 c          566 g          290 t
ORIGIN      
        1 tgtggagggg ccggccggta ccggtaagac ccagctggcc aagagcgtgg ccgagatcac
       61 cggctcccgc ctgatccgtc tgcagtgcta cgaggggctc gacgagtcca aggccctgta
      121 cgagtggaac tacaagaaac agctcctccg gatccaggcc gaaggcaccg acgccgcctg
      181 gaacgacgtg gaagatgacc tgttctccga ggagtttctt ttgacccggc cgttgctgga
      241 agccatccga gctgaggacc gtgtggtgct cctgatcgac gaggtggacc gtgtcgaggt
      301 ggagaccgag gcgctgctgt tggagatcct ctcggagtac caggtgtcga tccctgaact
      361 gggaacggtg cagtcgaccc agatcccgat ggtattcctg acgtcgaacg gtacccgtga
      421 gctctccgag gcactgaagc ggcgttgcct ctacctatac atcgactacc cggacctcga
      481 ccgtgagcgt cagatcgtca ccgccaaggt tcccgggatc gatgcgaacc tggcagacca
      541 ggtggcccgg atcgtccggt cgattcgcca actggacctc aagaaggacc cgtcggtgtc
      601 ggaaaccctc gactgggccc gcactctggt gctgctcggc gtcgagcaga tcgacgccgc
      661 ggtggccacc gagacagcca acgtgttact gaagtaccgc accgacatcg agaaggcagt
      721 caaggagttc gccgacaacc ccgacgagct ggccggcccg gtgggctgat cgagggacct
      781 cccttccatg accattgcca gcacgtcaat tgacggcgcc cccatcgcag ccggtgatcg
      841 gccgttgttg gacctgctga gcggctttat cgaggaactc cgcaacgctg gtcttccggt
      901 gagcctgacg gaaaatctcg acgccatgga ggccgtcacc cacatcccgc tcgaagatcg
      961 ggaggcattc aagtacgcgt taggggccac gctggtcaag aaccacagcc actggcgtgc
     1021 cttcgaggtg gtgttcgagg tctacttctc gctacgggga ccggagtacg agatcgtcga
     1081 cggcgacccg tcggctgatt ccggcgaaag tgacgacgac cagctgcaga tgcctggcga
     1141 gggtcaggcc ggtggcggtg gtggcggcgg catgtcggcg ctgacccccg agcagttggc
     1201 cgaaatgctg ttcaaggcgc tcatgcaggg cgacgatgcg atgcttcggg cgttggcccg
     1261 ccagtcggtg atgcgctttg ccgggatgga acccgggagg ccggtgggcg ggacctacta
     1321 cctgtaccga acactgcgga acctggatct cgccgggatg ctggatcgtc tcatggaggc
     1381 gacccgagag gatgcacctg aggacctgac gccactggaa gagcggctcg aacgcgacga
     1441 gttcaacgac cgcatggacc gcctcaagca ggagatcgaa gcggagatcc gtcgacgact
     1501 ggttgccgat cggggtgtgg aggccatggc caagacactc cgcaagccgt tgcctgagga
     1561 cgtcgacttc atgcacgcct cacgcgagga gatggcgaac ctccgcaaag ccatctatcc
     1621 gttgacccga aagttggccg tacgcctggc ccgcaagcgg cgtcacggtc gcaagggccc
     1681 actggacttc cgcaacacca tgcgacactc gctgagctac gg
//
LOCUS       DASCMR010000361         3185 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001774404, whole genome shotgun sequence.
ACCESSION   DASCMR010000361 DASCMR010000000
VERSION     DASCMR010000361.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3185)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3185)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3185
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001774404"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..534
                     /locus_tag="QGG16_08490"
     CDS             <1..534
                     /locus_tag="QGG16_08490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25351.1"
                     /translation="LISTAREGGRLKGFAFFTLERIGGTPAVIVGLASIHRTSKRDTV
                     LRALTTEQLRRAVMAFPDEDVVVGTRFNEVSGFEALKGLTGIVPRPGHKASGEERAWG
                     RRFVKRFGLSTLAYQEKRFTSPGKSFPACVFDHTSLKADKVDASVVAFFDDLDPTAGD
                     VLIGTGWALAEDLEKYA"
     gene            563..1165
                     /locus_tag="QGG16_08495"
     CDS             563..1165
                     /locus_tag="QGG16_08495"
                     /inference="COORDINATES: protein motif:HMM:NF013077.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HJP25352.1"
                     /translation="MTVADALRDRRSCRSFADRPLAPGRVDGLVDRARRTPTAGNCQG
                     VEFLVLESGEVAAYWDTTLSADRRADFPWPGLLVAPALVVPWGIPDRYVARYAEADKA
                     RTGLGDSAGDWSVPYWLTDAAFAAMALQMLAVEEGLGCCFFGLFDHEAAVAARFGVPD
                     GARAVGTIAIGHPDPLADRQSGSVDRRRRPLGEVLHRGTW"
     gene            1239..1664
                     /locus_tag="QGG16_08500"
     CDS             1239..1664
                     /locus_tag="QGG16_08500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HJP25353.1"
                     /translation="MSDDTAGETPVIPERLPIVDYLQLGNDPHLLANECTNCGARFFD
                     RRNACAKCGKAEFASARVADDAVLKSFSIVHRAAPGIPVPYVSAIVETRDGTSVRANV
                     VGLDDPMTAELGMSLVFTTYGCGTDDNGTECVAFGYAAV"
     gene            1715..2911
                     /locus_tag="QGG16_08505"
     CDS             1715..2911
                     /locus_tag="QGG16_08505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HJP25354.1"
                     /translation="MNDAVWVLGTSMTRFGRYPELDAVDLASRACLDALADGGVTIHD
                     MDVMGAGTLFQAQAGMGQRIQKQIGQTGIPVFNVTNACATGATAIRTVYLAIKAGEAQ
                     MGLAVGVEQMGKMGLLRGGAKDEAKVYEPAGRYGAVAPIDGILGTETMPGVFAQAGMG
                     YAYENDGVGFEQFAKVAYKNHLHSTLNPLAQYRKEFSMEEIMGSPVQSYPNTLLMCCP
                     TGDGAAAAVLVSEERLRSLPTEVQKRAVKISASVLTSDPWVESGQVQPDVNTLTRNAA
                     AQAYEAAGIGPEDLDLVELHDCFATAELIHYDNLGLCERGGAGDFIDSGAPFRDGRIP
                     VNVSGGLISKGHPIGATGVANVYEVTTHLRGEAGDRQVEGATVGLAHVIGLGSACGIH
                     ILEKAA"
     gene            complement(2948..>3185)
                     /locus_tag="QGG16_08510"
     CDS             complement(2948..>3185)
                     /locus_tag="QGG16_08510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25355.1"
                     /translation="DLFHAGITEIVVTGDRPDLVVAAANTWRPNVVLAWGEPFGGPLW
                     AGRNGDRAWVCRNFTCKAPVDTPDALRAALAEQS"
BASE COUNT          534 a          998 c         1074 g          579 t
ORIGIN      
        1 cttatcagca ccgcccgaga gggtggtcgg ctgaagggct ttgccttctt cacccttgaa
       61 cggatcggcg gcaccccggc ggtcattgtc ggtttggctt ccatccatcg gacctctaag
      121 cgcgacacgg tgctgcgggc gctcaccacc gaacagctcc gtcgggccgt gatggctttc
      181 cccgatgagg acgtggtggt tggcacccgc ttcaacgagg tctcaggctt cgaggccctt
      241 aagggcctaa ccggcatcgt tcctcgtccc ggccacaagg cctcaggcga ggagcgtgca
      301 tggggtcgac gcttcgttaa gcgcttcggc ctgtcgacgt tggcctacca ggagaagcgg
      361 ttcacctcgc ccggtaagag ctttccggcg tgcgtgttcg atcacaccag tctcaaggcc
      421 gacaaggtcg atgccagtgt ggtggccttc ttcgacgacc tggatccaac ggctggtgac
      481 gtgctcatcg gcaccggttg ggcgctggcc gaggacctcg agaaatacgc ctgagccggg
      541 acggtctgag ccgggttgcc ccatgaccgt cgccgacgca cttcgcgacc ggcggtcctg
      601 tcgatcgttt gccgaccggc cgttggcgcc aggccgggtg gacggtctcg tcgaccgggc
      661 ccgacgaacc ccgacggccg gaaactgtca gggcgtcgag ttcctggtgc tcgagagtgg
      721 tgaggtcgcg gcctattggg acaccacgct gtctgccgat cgtcgagctg acttcccgtg
      781 gcccgggctg ctggtcgctc cggccctcgt ggtgccctgg ggcattcctg atcgctatgt
      841 ggcccgctat gccgaagccg acaaggcccg gaccggactc ggggactcgg ccggagactg
      901 gtcagtgccc tattggttga ctgatgctgc ctttgccgcc atggctctcc agatgctcgc
      961 tgttgaagag gggttggggt gctgcttctt cggcctgttc gaccacgagg cagcggtggc
     1021 cgcacgattc ggagtgcccg atggggcacg ggccgtaggc actatcgcca tcgggcatcc
     1081 ggatccgttg gctgaccggc aaagtggctc ggtcgaccgt cggcgtcggc ccctgggcga
     1141 ggtgctgcat cgcggcacgt ggtgactctt gattcccctg aacggctccc gaggagcccg
     1201 gtagcgaccg ctgatgggct gaccggtacc gtccggttat gagcgatgac accgccgggg
     1261 agaccccggt cattcctgag cgtctaccca tagtcgacta cctccagttg ggtaacgacc
     1321 ctcaccttct ggccaacgag tgcaccaact gcggtgcccg attctttgac aggcgaaacg
     1381 cttgcgcgaa gtgcggcaag gccgagtttg cctccgcccg agtggctgat gacgctgttc
     1441 tgaagtcctt cagcatcgtg caccgagcgg cgccgggcat tccggtgccc tacgtctcgg
     1501 cgatcgtcga gactcgtgac ggcacgtccg tgcgggcgaa cgtggttggt ctcgacgacc
     1561 cgatgaccgc cgaactgggg atgagcctgg tgttcaccac ctacgggtgt ggaaccgacg
     1621 acaacgggac cgagtgcgtg gccttcggct acgcagcggt ctgaccggcc ttcgggccac
     1681 acgaacgagc catacgagcg agcaggagta cacgatgaac gatgcagttt gggtgctggg
     1741 aacaagcatg acccgattcg ggcggtatcc cgaactcgat gcagtggatc tagcgtcaag
     1801 agcgtgtcta gacgcgctgg ctgatggcgg ggtgaccatc cacgacatgg acgtgatggg
     1861 cgctggcacg ctgtttcagg cccaggcggg tatggggcaa cggatccaga agcagattgg
     1921 acagaccggg attcccgtgt tcaacgtgac taacgcgtgc gccaccggtg ctacggctat
     1981 tcggaccgtc tatctggcca tcaaggccgg agaggcccag atgggcctgg ctgttggcgt
     2041 ggagcagatg gggaagatgg gcctgttgcg gggcggcgct aaggacgaag ccaaggtcta
     2101 cgagcctgcg ggtcgctacg gcgctgtggc gcctatcgac ggcattctcg gcaccgagac
     2161 catgccgggc gtgttcgctc aggctggcat ggggtacgcc tatgagaacg acggggtggg
     2221 cttcgagcag ttcgccaagg tggcctacaa gaaccacctg cactccacgc tgaacccgct
     2281 agctcagtac cgcaaggagt tctccatgga ggagattatg ggctccccgg tacagagtta
     2341 ccccaacacc ctgctcatgt gctgcccgac cggcgatggt gcagccgccg ccgtactggt
     2401 atccgaggag cggctgcgtt ccctgccgac cgaggtccag aagcgggccg tgaagatctc
     2461 agcttcggtg ctgaccagcg atccgtgggt ggagagcggc caagtgcagc ccgacgtcaa
     2521 cacgctgacc cgtaacgctg ccgctcaggc ctacgaggcg gccggcattg gcccagagga
     2581 tctcgacctg gtcgagctcc acgactgctt cgccaccgcc gagctcattc actacgacaa
     2641 cctgggccta tgcgagcggg gcggggctgg cgacttcatc gactccggtg cgccgtttcg
     2701 cgacggtcgg attccagtga acgtgtcggg gggcttgatc tccaaggggc accccattgg
     2761 ggcaaccggg gtggccaacg tctatgaggt cactacacac ctgcgcggag aggccggcga
     2821 ccgtcaggtc gaaggagcga cggtgggtct ggcccatgtc atcgggcttg gctcagcgtg
     2881 cggcatccac atcctcgaga aggccgcctg accagtcggt cgagttcgag ggtccgaccc
     2941 gccccggtca ggactgctcg gccaacgcag cccgtaaagc gtcgggagta tcgacggggg
     3001 ccttgcaggt gaagtttcgg cacacccagg cccggtcgcc atttcgcccc gcccacaacg
     3061 gtccaccgaa cggctcgccc catgcaagga cgacattggg tcgccacgta ttggccgccg
     3121 cgaccaccag gtcgggtcgg tcaccggtca ccacgatctc ggtgatcccg gcgtggaaca
     3181 ggtcg
//
LOCUS       DASCMR010000362         1716 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001781698, whole genome shotgun sequence.
ACCESSION   DASCMR010000362 DASCMR010000000
VERSION     DASCMR010000362.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1716)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1716)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1716
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001781698"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..923
                     /locus_tag="QGG16_08515"
     CDS             <1..923
                     /locus_tag="QGG16_08515"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015049.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MBOAT family O-acyltransferase"
                     /protein_id="HJP25356.1"
                     /translation="QLVAGPIVRARDFLAQLATDDRSPIDTGRATRLVLGGLFKKMVL
                     ADVLGSKLVDGVFADPGGATGLETLLGIYGYALQIYGDFSGYSDIAIGIALLLGFRFP
                     VNFDQPYRALSLQDFWRRWHISLSSWLRDYLYIGLGGSRRGRSRTARNLMATMLLGGL
                     WHGAGWTFVLWGAIHGVGLVAERSIPGLLGGAEPSRPGRVVRTLVTFHIVCIGWVFFR
                     SVNVDRAMEVFGALGGSWTTAPEVGFGVVLLLLVGAATQLLPVGAADRWWDRAARLPV
                     VLQATGFTCAILAFDLLGPEGVKPFLYFAF"
     gene            complement(956..>1716)
                     /locus_tag="QGG16_08520"
     CDS             complement(956..>1716)
                     /locus_tag="QGG16_08520"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJP25357.1"
                     /translation="WGWRSTWVAAACVILVSVIAIARFGMVDRPSDLGQVPDGRIADS
                     NGGRDAGGPSPSRAEVLQSPAFWVLAAVASANSLLITGMVFHQTNVLGELDYSDARAA
                     AMFLPQAIGAIAGGLAFGWASDRRGRFLLPAAIALLLTVSCLLGGTGTTTATVFAYSI
                     GLGICTGGGAAINGALLPALFGIRNIGSVSGLLHVVSVVNSALGALAFSLGADLFGSY
                     REALTVFAIWPAVLVVVAIVWRPRLPAPAISPHS"
BASE COUNT          291 a          543 c          567 g          315 t
ORIGIN      
        1 cacaactagt cgccggacct atcgtgcggg cccgggactt tctggctcag ttggccacgg
       61 acgaccggtc acctatcgac accgggcggg ccactcgact ggtacttggc ggcctgttca
      121 agaagatggt cctggccgac gtactcggat ccaagctggt cgacggagtg ttcgctgacc
      181 ctggcggggc gaccggcctg gaaacgctgc ttggcatcta cggctacgcc ttgcagatat
      241 acggcgactt cagtgggtat tccgacatcg ccatcggcat cgccttgctg ctgggtttcc
      301 ggttcccggt gaatttcgac cagccgtacc gggctctcag cctccaggac ttctggcggc
      361 ggtggcacat cagtctttcg tcatggctcc gggactatct gtacatcggg ttggggggaa
      421 gtcgacgtgg tcggtcccgc acggctcgga acctgatggc caccatgctg ttgggcggcc
      481 tgtggcacgg ggccggatgg acattcgtct tgtggggggc catccacggc gtgggtctgg
      541 tcgctgaacg gtcgattccc ggcctactgg gaggggccga gccgtcccgg ccgggtcggg
      601 tcgtcaggac tttggtgacg tttcacatcg tttgcatcgg ttgggtgttc ttccgctccg
      661 tgaacgtgga cagggccatg gaggtgttcg gagccctcgg gggctcgtgg acgacggccc
      721 ccgaggtcgg gttcggcgtg gtgctgctac tcctggtcgg tgcggccact caactgcttc
      781 cggttggggc cgccgaccgc tggtgggatc gggcggcacg cctacccgtg gttctgcagg
      841 ccaccggctt cacctgtgcc atcctcgctt tcgacctgtt gggtcccgag ggcgtcaaac
      901 cctttctgta tttcgccttc tagagagccc atcaagagcg ggcccgatcg tcccctcagc
      961 tgtgcggtga aatagctggg gcgggcagcc gggggcgcca gacgatggcc accacgacca
     1021 acaccgctgg ccagatggcg aaaacggtga gcgcctcgcg gtagctgcca aatagatcgg
     1081 ctcctagtga gaaggccagg gcccctagtg cggagttgac cacgctgaca acgtgcagta
     1141 atcccgacac ggaaccaatg ttgcggatgc cgaacagcgc cggcaggagg gcgccgttga
     1201 tcgccgctcc accgcctgtg cagatcccca ggccgatcga ataggcgaac actgtggcgg
     1261 tagtggttcc cgtcccgcct aacaggcaac tcacggtcag caacagggcg atcgccgcgg
     1321 gaagcaggaa ccgaccacgg cgatccgagg cccaaccgaa ggccaggcca ccggcaattg
     1381 ctcctatggc ttggggaagg aacatggccg ccgcccgggc atcggagtag tccagctcac
     1441 ccagcacgtt ggtctgatgg aacaccatcc cggtgatcag gagactgttg gccgacgcca
     1501 cagcagccag tacccaaaat gccggtgact gcaacacctc ggctcttgac ggcgagggtc
     1561 cgccagcgtc ccttccgccg ttggagtctg caatcctgcc gtcggggacc tgtccgaggt
     1621 ccgatggccg atccaccatt ccgaaccggg caatggcgat aacactgacg aggatcacgc
     1681 aagcggcggc gacccaggtc gaccgccatc cccagg
//
LOCUS       DASCMR010000363         2318 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001786600, whole genome shotgun sequence.
ACCESSION   DASCMR010000363 DASCMR010000000
VERSION     DASCMR010000363.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2318)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2318)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2318
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001786600"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..382)
                     /locus_tag="QGG16_08525"
     CDS             complement(<1..382)
                     /locus_tag="QGG16_08525"
                     /inference="COORDINATES: protein motif:HMM:NF012797.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrmH family RNA methyltransferase"
                     /protein_id="HJP25358.1"
                     /translation="MKNLDGTGLKRLHREWRRRSEPDVALLLDSVQTPYNVGAILRTA
                     AAYRVSHLWLAGATSPPTHAKVAKTALGTGRYLTWTICEEADEALAAIASAGYGLVGV
                     ELADGALPIHDVAFPDRTCLALGHE"
     gene            complement(393..1028)
                     /locus_tag="QGG16_08530"
     CDS             complement(393..1028)
                     /locus_tag="QGG16_08530"
                     /inference="COORDINATES: protein motif:HMM:NF017026.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HJP25359.1"
                     /translation="MDARKDQHYWSDRPEAVSRPGEVSLLLPDVDLTLATDRGVFSAD
                     RVDRGTRYLLLEGPPPPTGPVALMDLGCGYGPIACALATRNPEATVWAVDVNERARDL
                     CRANAANAGLDGVRVVAPDEVPDDLSLAGLWSNPPIRIGKEALHDLLNRWLGRLAPEG
                     TAHLVVQRHLGADSLARWLDGAGWTTTRRGSRKGFRLLDVARVEPDVRNPT"
     gene            1053..1616
                     /gene="def"
                     /locus_tag="QGG16_08535"
     CDS             1053..1616
                     /gene="def"
                     /locus_tag="QGG16_08535"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012229394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HJP25360.1"
                     /translation="MSTHEIRVIGDPVLRTPAADVTNVDGALARLCEDMFTTMYEALG
                     IGLAAPQVGVQKRFFVYDHGEDSGVVLNPRIVESDGEWAFEEGCLSVPGLSWEIVRPK
                     TIHLVGVDLDGNELSIEADELEARLFQHEIDHLDGVLLVDHLDDEQRRDARRALNELT
                     VARPSQPGGSFPMDTGGRSSGGGLQLP"
     gene            1613..>2318
                     /locus_tag="QGG16_08540"
     CDS             1613..>2318
                     /locus_tag="QGG16_08540"
                     /inference="COORDINATES: protein motif:HMM:NF012760.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HJP25361.1"
                     /translation="MTATVPERPRRLAYLGNPAVAVAPLRALHEASERLGTEVVVVVT
                     AEDRRRSRRGAPSPTPVAQAAVELGLPVTHDLSSVVDSDADLGVVVAYGQIIPVSLLN
                     QLPMINLHFSLLPRWRGAAPVERALLAGDVATGVCLMDVAEELDTGGIRGRVATPIGP
                     DETAEDLRGRLGDLGARLLVDGLAAGLEASEPQQGEPTWAHKIGSGDLWLDWSRSATE
                     LERMVRVGGAHTTFRGE"
BASE COUNT          365 a          765 c          807 g          381 t
ORIGIN      
        1 cctcatggcc gagggctagg caggtccggt ccgggaatgc cacgtcgtgg atggggagag
       61 caccatcggc caactcgaca cctaccagcc cgtacccggc cgacgcgata gctgccaacg
      121 cctcgtcggc ctcctcgcaa atcgtccacg tgaggtaccg gccggtcccg agggccgtct
      181 tggccacctt ggcgtgcgta ggtggactgg tggccccggc caaccagagg tgggacaccc
      241 ggtaggcggc ggccgtccgc aggatggccc ccacgttgta cggggtctgg acgctgtcga
      301 gcagcagggc cacgtctggt tcgcttcggc ggcgccattc gcggtggagg cgtttgagtc
      361 cggtgccatc gaggttcttc atgcggagct cttcatgtcg ggttcctgac gtcgggctcc
      421 acgcgggcca catccagcag acggaatccc ttgcgcgacc ccctccgggt ggtggtccag
      481 cccgctccgt cgagccatcg ggcgagggag tcggccccca ggtggcgttg gaccaccagg
      541 tgagccgtcc cttcgggggc gagccgaccc agccagcggt tcaggaggtc gtggagggct
      601 tccttgccga tacggatggg cggattggac caaaggccgg ccaatgacag gtcgtcaggg
      661 acctcgtcgg gcgccaccac ccgtacgccg tccaggccgg cgttggcggc attagcccgg
      721 cacaggtcgc gggcccgttc gttcacgtcg acggcccaca ccgtggcctc ggggttacgg
      781 gtggccagtg cacaggcgat gggtccgtag ccacaaccca ggtccatgag agcaactgga
      841 ccggtcggtg gcggcggccc ctctagcagc agataccggg ttccgcggtc gacccggtcg
      901 gcggaaaata ccccccggtc ggtagccagc gtcaggtcga cgtcgggaag tagaagggag
      961 acctcgcccg gtcgcgacac cgcctcaggt cgatccgacc agtagtgctg gtccttccgg
     1021 gcgtccacgg tggcgacggt agcctcgtcg ccgtgtccac ccacgagatc agggtcattg
     1081 gcgaccccgt ccttcgcacg ccggctgccg acgtgaccaa cgtcgacggc gcgctggctc
     1141 ggttgtgcga agacatgttc accaccatgt acgaggcgct aggcatcgga ctggcagccc
     1201 cccaggtcgg cgtgcagaag cgtttcttcg tatacgacca cggcgaggac tccggcgtgg
     1261 ttctgaaccc gcggatcgtg gagtccgacg gcgagtgggc ctttgaggaa gggtgtctct
     1321 ctgtgcccgg cctgtcgtgg gaaatcgtcc gcccgaagac gatccacctg gtaggcgtgg
     1381 atctcgacgg caacgagctc tcgatcgagg ccgacgagtt ggaggcccga ctcttccaac
     1441 acgagatcga ccacctggat ggggttctgc tagtcgacca cctcgatgac gaacagcggc
     1501 gagacgcccg tcgtgcccta aacgagttga ccgtggctcg cccgagccag cctggtgggt
     1561 ccttcccaat ggacacaggt ggccgatcgt cgggcggggg acttcaactg ccgtgacggc
     1621 caccgtcccg gagcggcccc gccgtctggc ctacctcggg aatccggcgg tcgccgtggc
     1681 acccctgcgg gcacttcacg aggcctccga acgactgggt accgaggtcg tcgtggtggt
     1741 caccgccgaa gaccgtcgac ggagccggcg gggagcgccg tcgcccaccc cagtggctca
     1801 ggccgcggtc gaactcggtc tcccagttac ccatgacctc tcgtcggtcg tcgattcgga
     1861 tgcagacctg ggagtggtgg ttgcctacgg ccagatcatc ccggtgtcgt tgttgaacca
     1921 gctacccatg atcaacctgc acttctcgct actaccccga tggcggggtg cggcacctgt
     1981 cgaacgggcg ttgctggccg gcgacgtcgc aacaggggtc tgtctcatgg acgtggccga
     2041 ggaactcgat accggtggca tccggggtcg ggtggccaca ccgatcggcc cggacgagac
     2101 ggctgaggac ctacggggac gactcggaga cctgggtgcc cggctcctgg tggacggcct
     2161 ggccgctggc ctcgaggcct ccgagcccca gcagggagaa cccacgtggg cccacaagat
     2221 cgggagcggt gacctgtggt tggactggtc ccgttcggcc accgaattgg agcggatggt
     2281 ccgggtgggc ggcgctcaca ccacattccg gggcgaac
//
LOCUS       DASCMR010000364         2413 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001793772, whole genome shotgun sequence.
ACCESSION   DASCMR010000364 DASCMR010000000
VERSION     DASCMR010000364.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2413)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2413)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2413
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001793772"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            142..582
                     /locus_tag="QGG16_08545"
     CDS             142..582
                     /locus_tag="QGG16_08545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25362.1"
                     /translation="MNSSRESSNARPLARIAPVAGRLAAGLMVVGFLSTGLLASGCGG
                     SDDGSTADKPADGVLRVVGLDTQDFHADSYMATAGEVTVEFSLAGFQEHTLVIEGRED
                     ELRLVVENGGTDTGTITLEPGRYILYCDIAGHRQSGMEARLLVE"
     gene            complement(678..1430)
                     /locus_tag="QGG16_08550"
     CDS             complement(678..1430)
                     /locus_tag="QGG16_08550"
                     /inference="COORDINATES: protein motif:HMM:NF017945.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urate hydroxylase PuuD"
                     /protein_id="HJP25363.1"
                     /translation="MELFSDFMGMTGGGQALGRYAHYLAGITWIGLLYFFNFIQGSAF
                     AEMGDAARGEALRKITWRTLWWFRWAALGTWLSGIWILIAQEVRGDYFRSAAGMGISF
                     GFLLGTTMAANVWMVIWPAQQIAIGSSVAVSEGGEADPAAPAAAKRAGRASRVNTLFS
                     IPLVFFMMFPSHFASHFGDVTNKLAVDSGARIAIWIIFAVVWIVMELSAVGKIGGYDS
                     AINRIVLDKHQDTIKYGLAITVLLYLLFEILA"
     gene            complement(1549..>2413)
                     /locus_tag="QGG16_08555"
     CDS             complement(1549..>2413)
                     /locus_tag="QGG16_08555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HJP25364.1"
                     /translation="DLSPGALAGLIESESVTMAAGVPTIWMGVLPELAGRETSSLRSV
                     ICGGSAVSKSLSEGFRETTGLPILQAWGMTETSPLASTCNIKSTLDHLDDDAKADLRT
                     AIGLVSAGVDFRIAEPETGEELPWDGQTSGELQVRGPWVAGSYYDDERSSESFTDDGW
                     LKTGDVATADAEGYIRLVDRTKDLIKSGGEWISSVELENEIMAHPEVAEAAVIGVTSA
                     KWGERAMACVVTVGGADLSADDVLAWLDGRVVKWWMPDRVEFIDEVPKTSVGKFSKKT
                     LRDRFADVTVD"
BASE COUNT          451 a          783 c          773 g          406 t
ORIGIN      
        1 cgttcaagca cccgggctac gtcgtcggcg gcccgacccc gccgggccgc gggattggcc
       61 agcagggcaa cctgggaacc cttgcgtcgg atggaagaac tcgacatcgg cccatcatcg
      121 cccatcggta gcctccggcc catgaactca tctcgcgaat cgagcaatgc gcgtcctctg
      181 gcccgtatcg caccggttgc cggtcgtttg gcggctggcc tgatggtggt cggtttcttg
      241 agcaccggcc tcctggcttc gggctgcggt ggaagcgatg atggctccac ggctgacaag
      301 ccggctgacg gcgttcttcg ggtggttggg ctcgacacgc aggacttcca tgccgacagc
      361 tacatggcca ccgctggcga ggtcaccgtc gaattctcac tggccggctt ccaggagcac
      421 acgctggtca tcgaaggccg tgaggacgaa ctgcgtctcg tcgtcgagaa cggtggcacg
      481 gacaccggga ccatcacgct cgagccgggc cgctacatcc tctactgcga cattgccggc
      541 caccgccaga gcggcatgga agctcgactg ctcgtggagt aacgagccga tctgaaaagc
      601 acgaacgacc cgccccggag ggcgggtcgt ttcgcgtcag cgaacttggc gcagcggccg
      661 gtgaccagag gtggtactca ggcgaggatc tcgaagagca ggtagagaag gacggtgatg
      721 gccaggccgt acttgatcgt gtcctgatgc ttgtcgagca cgatcctgtt gatcgcgctg
      781 tcgtagccgc cgatcttgcc gacggctgag agttccatca cgatccagac cactgcgaag
      841 atgatccaga tggcgatgcg agcaccggaa tccaccgcca gcttgttcgt gacatctccg
      901 aagtgcgaag cgaagtggct cgggaacatc atgaagaaga cgagcggaat cgagaacagc
      961 gtgttgaccc ggcttgcccg accggctcgc ttggccgcag ctggcgcagc ggggtcggcc
     1021 tcaccgccct cagagacggc caccgatgaa ccgatggcga tctgctgagc tggccagatc
     1081 accatccaca cgttggcggc catggtcgtg ccgagcagga agccgaatga gatccccata
     1141 ccggcggccg agcggaagta gtcgccacgg acctcctggg cgatcaggat ccagatgccc
     1201 gagagccagg tgccgagggc ggcccagcgg aaccaccaca gggtgcgcca tgtgatcttg
     1261 cggagagcct cgccgcgtgc ggcatcgccc atctcggcga aggccgaacc ctggatgaag
     1321 ttgaaaaagt agaggaggcc aatccaggtg atgccggcca aatagtgggc ataccgacca
     1381 agggcctgac cgcctccggt cattcccatg aagtcactga acaattccac gaaggtctcc
     1441 ctcgattcgg tgtgggcgga cgggcacgat catgccatga gacgcgcgtc ccgacaacga
     1501 cccgccgggc aggtctgtag ccgacccgac tggatcaacc aggcccgatc agtcgaccgt
     1561 cacgtcggcg aagcgatccc gcagggtctt cttggagaac tttccgaccg aggtcttggg
     1621 cacctcatcg atgaactcca cgcggtcggg catccaccac ttcacgaccc gcccgtccag
     1681 ccaggccagc acgtcgtcgg ccgagaggtc ggcccccccg acggtcacta cgcaggccat
     1741 ggcccgctcg ccccacttgg ctgacgtcac cccgatgacg gcggcctcgg ccacttcggg
     1801 atgggccatg atctcgtttt ccagctcgac cgaactgatc cactcgccgc ctgacttgat
     1861 gaggtcctta gtgcggtcca cgagccggat gtaaccctcg gcgtcggcgg tggccacgtc
     1921 gcccgtcttg agccaaccgt catcggtgaa cgactccgat gagcgctcgt cgtcgtagta
     1981 gctgcctgcc acccacggtc ccctgacctg caactcgccg ctcgtctggc cgtcccacgg
     2041 cagctcctcg ccggtctcgg gttcagcgat gcgaaagtcc acgccggcgg agaccaggcc
     2101 gattgcggtg cgaaggtcgg ccttggcgtc atcgtcgagg tggtcgagcg tcgacttgat
     2161 gttgcaggtg gacgcgagag gactggtctc agtcataccc cacgcctgga ggatgggaag
     2221 gccggtggtt tcccggaagc cttccgagag tgacttcgag acagcagatc cgccacagat
     2281 gacggaccgc aacgacgagg tctctcggcc agccagttca ggcagcacgc ccatccagat
     2341 ggtggggaca cctgcagcca tggtcaccga ttcgctttcg atgaggccgg ccagtgctcc
     2401 gggggacagg tcg
//
LOCUS       DASCMR010000365         1839 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001794434, whole genome shotgun sequence.
ACCESSION   DASCMR010000365 DASCMR010000000
VERSION     DASCMR010000365.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1839)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1839)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1839
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001794434"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1511
                     /locus_tag="QGG16_08560"
     CDS             <1..1511
                     /locus_tag="QGG16_08560"
                     /inference="COORDINATES: protein motif:HMM:NF014443.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015079 - potassium ion transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HJP25365.1"
                     /translation="MAILFVAAGMAVATSVAMVDGRDAIALATATAVTGLIGLALFHV
                     AKPDSQDQAAVFSAVGTTWLVASLLGALPYLLAGTFAVAGRPWAIVLADSLFESISGF
                     SCTGSTVFGSHNPIEAQGSGILMYRQLTQWAGGMGIVVLVVMVLPSLRSSGLGLIDAE
                     APGMGVDRLAPRISTTAVWFWGIYAGFTVLVALGLFGAGMGPFDAVAHALSTASTGGF
                     STKDASIGHWDSLSIEVVLVVAMLLGGANFTLHSRMLRRRRIGHHRDPEFRGYLAMIA
                     MGTLLVTLLLVDDGMGLGRSLRSAIFNVVTLGTSSGFGNATGEGSAGDFTSWSSGPQM
                     ILLLFLVFGGCTGSTAGGVKVMRLRVGLSHAYRTLRAFRRPRAILVVRQGANTVPEHL
                     VERIAGFMVVYGLLVVGGTMVVAALGTDLITAAGGVISSLGNMGPALGDAGPTASFAD
                     AYSTPARMALAILMLIGRLEIFPMLLMLVAPYRALDGATRGMRIRLRRGRHR"
     gene            complement(1525..>1839)
                     /locus_tag="QGG16_08565"
     CDS             complement(1525..>1839)
                     /locus_tag="QGG16_08565"
                     /inference="COORDINATES: protein motif:HMM:NF014213.3"
                     /note="catalyzes the removal of amino acids from the N
                     termini of peptides; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M18 family aminopeptidase"
                     /protein_id="HJP25366.1"
                     /translation="GDHPVLLNGGPVLKFNAKERYATDAPGAAEVRDLAERAGIPLQS
                     FVSRSDMPCGSTIGPSTSARTGLRTVDLGVAQLAMHSAREFCGSEDPALLGRLLDAVL
                     AG"
BASE COUNT          279 a          558 c          617 g          385 t
ORIGIN      
        1 gtatggcgat cttgttcgtg gctgctggca tggccgtggc aacgtcagtg gcgatggtcg
       61 acggacgtga tgccatcgct ctggcgacgg ctacggcggt caccgggtta attgggctgg
      121 cgctattcca cgtggccaaa cctgattccc aggatcaggc ggcggtattc agtgccgtcg
      181 ggacgacctg gctggtggcg tcgcttctgg gagccctgcc gtacctcctt gctggcacgt
      241 ttgccgtggc agggcgtccg tgggccatcg tgctggccga ttccctattc gagtcgatct
      301 ccggcttttc ctgcaccggg tccacggtct ttggtagtca caacccgatc gaggcccagg
      361 ggtcgggcat cctcatgtat cgccaactca cgcagtgggc gggcggtatg ggcatcgttg
      421 tactggtggt gatggtcctt ccgtcgctcc ggtctagcgg cctgggcctt atcgacgccg
      481 aggcaccggg gatgggtgtg gaccgtctcg caccgcgcat ctccaccacg gcagtctggt
      541 tctgggggat ttatgctggg ttcaccgtgt tggtggccct cgggctgttt ggggcgggga
      601 tgggaccgtt cgatgcggtc gcccatgccc tgagtaccgc gtcgacaggc ggcttctcca
      661 ccaaggatgc atcaattggc cattgggaca gcctgtccat cgaggtggta ctggttgtgg
      721 ccatgctcct cggaggggcg aacttcaccc tgcacagcag gatgcttcga aggcgccgaa
      781 tcggccacca ccgtgacccg gagttccggg gttacctggc catgattgcc atgggaacac
      841 tgttagtgac cctgctcctg gtcgacgatg gcatggggct cggaagatca ctccggtcgg
      901 cgatcttcaa cgtcgtaacc cttggaacga gcagcggctt tggcaatgcc acaggtgagg
      961 gaagtgcagg ggacttcacg tcgtggtcgt cgggacccca gatgattctg cttctgttcc
     1021 tggtgttcgg aggctgcacg ggctcgacgg ccggcggtgt gaaggtgatg cgtcttcgtg
     1081 ttggcctgtc ccatgcctac cggacactgc gggccttccg gcgtccccgg gccatcctgg
     1141 tcgtccggca gggggccaac accgttcccg agcacctggt ggagcggatt gccggcttca
     1201 tggtcgtgta cggcctcctg gtggtcggtg gcaccatggt cgtggcagcg ttgggcaccg
     1261 acctgattac agcggctggc ggagtcatca gctcgctggg gaatatgggc ccggccctgg
     1321 gtgatgccgg accgacggcg tcgttcgccg acgcctattc gactccggca cgaatggctt
     1381 tggccatcct catgctgatc ggtcgtctcg agatcttccc catgttgctg atgctggtgg
     1441 cgccctaccg ggcgctggac ggtgcaactc ggggtatgcg aatccgacta cgtcgcggtc
     1501 gacaccgctg accggccgtc accttcaacc agccagaact gcgtccagta gacggcctag
     1561 cagcgcagga tcctcacttc cacagaactc ccgagcgctg tgcatggcga gttgagccac
     1621 tccgaggtcc acggttcgca gccccgttcg ggcagaggtg gacggaccga tagtcgaacc
     1681 gcacggcata tcggaacggc tcacgaatga ctgcagcgga atcccagccc gttcggcaag
     1741 atcacgaacc tcggcagcgc ccggcgcatc ggtggcgtat cgctccttcg cattgaactt
     1801 caggaccggg ccgccgttga gtagcacggg gtgatcgcc
//
LOCUS       DASCMR010000366         3333 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001796344, whole genome shotgun sequence.
ACCESSION   DASCMR010000366 DASCMR010000000
VERSION     DASCMR010000366.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3333)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3333)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3333
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001796344"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1338
                     /locus_tag="QGG16_08570"
     CDS             <1..1338
                     /locus_tag="QGG16_08570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HJP25367.1"
                     /translation="LTNQTVELLQALIRNQCVNDGTAESGHEVRNADLLATYLEGAGL
                     DLQRYEPTPGRTSLVARIEGSDPDAPALCLMGHTDVVPVSLDGWSRDPFAGELVDGEV
                     WGRGAVDMLNLVASQAVVFRTLADRGFRPRGDLVFFAVADEESGSTHGARWMADHEWD
                     AIAADYVLTENGGLHTGSEDSPAIGVNVAEKGVAWRRLTVRGTPGHGSTPYRSDNALL
                     KAAAVIQRLADYSPDPRFHELWRAQVQAMDLADDVRDQMLDEDRIDDYLAELPRTPSV
                     NGMAGHLHACTHTTFSPNVGHGPGKTNTIPDRVTLDIDIRTMPGDSTEEVATHLREAL
                     GDLSDEVETEIVMDDPASASRIDTPLWDSLERAITKPFPTARLNPQFIVGFTDSRIYR
                     EKGSVSYGAGLMSPAVDAGDFSRRFHGHDERIDIESLRLTTGMYFDVCEDFLR"
     gene            1359..2198
                     /locus_tag="QGG16_08575"
     CDS             1359..2198
                     /locus_tag="QGG16_08575"
                     /inference="COORDINATES: protein motif:HMM:NF025008.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HJP25368.1"
                     /translation="MEDTWDGDFDRETAVEPTGDDRFEVQVSSSWNIGDNPNGGYLTA
                     IALQAIRQLGDPLAGHVDPLSVTTHYLRPGSGGIIGEVKTGLIRAGRTVTTGRATLIQ
                     DGKPRIEVMASMGDLSGGSGHDHEMAIAPPTDMPPPDQCVERDGLEQGVKLFIARRID
                     LRIHPDTAAAGASDNAETLGWIRFADGREPDTLGLTLFADAFAPSIFTRLGRVGWVPT
                     IELTAHVRRRPAPGWVQGRFVTEDLHDGRMIEDGWLWDSTGALVARSRQLAMLLPDAD
                     TGS"
     gene            complement(2220..2987)
                     /locus_tag="QGG16_08580"
     CDS             complement(2220..2987)
                     /locus_tag="QGG16_08580"
                     /inference="COORDINATES: protein motif:HMM:NF006100.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crotonase/enoyl-CoA hydratase family protein"
                     /protein_id="HJP25369.1"
                     /translation="MSDEAVQPAVLVERRERVMIITLNRPEAMNAINGDLSHGLLSAV
                     QELNADPGFTAGDLTGAGKGICSGMDLKAFSRGEDIGPMLEFVSNGAAKPLIAAIEGF
                     AMAGGLELALSCDLLVAAEGARLGIPEVKVGLFAAGAGLFRLPGRVGYGRAMEMALTG
                     DPITAEEAADAGLVSMVTPKGGALDAAIELAERIARNAPLAVAASKAIVRATQGATED
                     ELRAIQQPHMRVVWGSDDAKEGPKAFADKRSPEWTGS"
     gene            complement(3003..>3333)
                     /locus_tag="QGG16_08585"
     CDS             complement(3003..>3333)
                     /locus_tag="QGG16_08585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJP25370.1"
                     /translation="VAAFDGQIGQAAYSASKGGIVGMTLPIARDLAAVGVRVNTIAPG
                     LIDTPIYGEGEQSEAFKAHLGESVLFPKRLGSGEELAFMVLELITNPYMNAEVIRVDG
                     GIRMPPK"
BASE COUNT          614 a         1114 c         1041 g          564 t
ORIGIN      
        1 ctcaccaacc agaccgtcga gttgctgcag gcccttatac gcaaccagtg cgtcaacgac
       61 ggaacggccg aatcgggcca cgaggttcgc aatgccgatc tgctggccac ctacctggag
      121 ggcgcaggcc tggacctgca gcgttacgaa cccacgcccg gccgtacctc gctagtggcc
      181 cgcatagaag ggtccgaccc cgacgccccg gcgttgtgcc tgatgggcca caccgacgtc
      241 gtgccggtga gcctcgacgg ctggtcgcgc gacccgttcg ccggtgagct ggtggacggc
      301 gaggtgtggg ggaggggtgc cgtcgacatg ctcaacctcg tggcctccca ggcggtggtg
      361 ttccgcacgt tggccgatcg tggattccga cctcgggggg acctggtgtt cttcgcggtg
      421 gccgacgagg aatcgggcag cacacacggg gcccgttgga tggccgacca cgagtgggac
      481 gccatcgcag cggactacgt gctgaccgag aacggtgggc tccacaccgg gagcgaggat
      541 tcaccagcca tcggcgtgaa cgtggccgag aagggggtgg cgtggcgccg cctgaccgta
      601 cgtggcacgc ccggccacgg atcgacgccc taccgctccg acaacgccct cctgaaggcc
      661 gcagccgtga tacaacgctt ggccgactac tcacctgatc cccgattcca tgaactctgg
      721 cgagctcagg tccaagccat ggacctcgcc gacgatgtcc gggaccagat gctcgacgag
      781 gaccgtattg acgactacct agccgaactt ccgcggacac cttcggtgaa cggcatggca
      841 gggcatctcc acgcctgtac ccacaccaca ttctcgccaa acgtgggcca cgggccaggc
      901 aagaccaaca ccatcccgga ccgggtgacc ctcgacatcg acatccggac gatgcctggt
      961 gactccaccg aagaggtggc cacccatctc cgtgaggcac tcggcgacct gtccgacgag
     1021 gtcgagaccg agatcgtcat ggacgacccc gcgtcggcca gccgcattga cacccccctg
     1081 tgggattcgc tggaacgggc gatcacgaag ccgttcccca ctgcccgcct taacccccag
     1141 ttcatcgtgg gcttcaccga ctcacggatt taccgcgaaa agggatcagt gtcctacggc
     1201 gccggcctca tgagtccggc ggtggacgcc ggcgatttct cccggcggtt ccatgggcac
     1261 gatgaacgca tcgacattga gtcgctgcga ctcactaccg gcatgtactt cgacgtctgc
     1321 gaagacttcc tcagatgagc ggggagcgga aagaacacat ggaggacact tgggacggtg
     1381 acttcgaccg ggagacggcc gtcgagccga ccggcgacga ccggttcgag gtgcaggtca
     1441 gcagtagttg gaacattggt gacaatccga acggcggata cctgacggcc attgccttgc
     1501 aagccatccg gcaactcggc gaccctctcg caggtcatgt agatccgctt tctgtcacca
     1561 cccactatct gcgacccggc tctgggggaa ttatcggcga ggtgaagact gggctgatcc
     1621 gagctgggcg gacagtgacc accggtcgag ccaccctcat tcaggacggc aaacctcgca
     1681 tcgaagtcat ggcatccatg ggtgaccttt cgggcggatc gggacacgac cacgagatgg
     1741 ccatagcgcc ccccaccgat atgccgccac ccgaccagtg tgtggaacgc gatggcctag
     1801 aacagggcgt aaagcttttc atcgcccgac ggatagacct gcggatccac cccgacacgg
     1861 cagccgccgg agcgtcggac aacgctgaga cgctcggatg gattcggttc gccgacggtc
     1921 gtgaacccga cacgctcggc ctcaccctgt tcgctgatgc cttcgccccg tcgatcttca
     1981 ccagactcgg ccgagtggga tgggtgccca ccatcgaact gacggcgcac gttcgccgtc
     2041 gcccagcgcc cggctgggtt cagggccggt tcgtcacgga ggacctacat gacggccgga
     2101 tgattgaaga cggctggctc tgggactcca ccggcgccct ggtggcccgg tcccgacagt
     2161 tggccatgtt gctccccgac gccgacaccg gttcctgaac ctcggacctg ttggttccgt
     2221 caggaaccgg tccactccgg agaacgctta tcggcaaacg ctttgggccc ctccttggcg
     2281 tcgtccgaac cccaaaccac cctcatatgg ggctgctgga tagcccgcag ctcgtcttcg
     2341 gtcgccccct gagtggcacg aacgatggcc ttggaggccg ccacggccag gggagcgtta
     2401 cgtgcgatgc gttcggccaa ctcgatggcc gcgtcgagtg ccccgccctt aggagtgacc
     2461 attgagacga gtccggcatc ggccgcttcc tcggcagtga tcgggtcacc ggtgagggcc
     2521 atctccatgg cccggccgta acccactcga ccaggcaggc ggaatagacc ggctccggcg
     2581 gcgaacaggc cgaccttcac ctctgggatg cccagcctgg caccctcggc ggccaccaga
     2641 aggtcgcatg acaacgccaa ctcaaggcca ccggccatgg cgaaaccctc gatggcggcg
     2701 atgaggggct tagccgctcc attgctgacg aactcgagca tcgggccaat gtcctcgccg
     2761 cgggagaatg ccttgaggtc catgcccgaa cagatcccct tcccggcacc ggtgaggtcc
     2821 ccggctgtga acccggggtc ggcgttcaac tcttgtacgg cgctcaatag gccgtgggac
     2881 aggtctccgt tgatggcgtt catggcttcg gggcggttga gggtgatgat catcacccgc
     2941 tcccgtcgtt cgaccagaac tgccggctgg accgcttcat cgctcatcgt ggtgatccgt
     3001 tcctacttgg ggggcatcct gatgccgccg tctacccgga tgacctcagc attcatgtac
     3061 gggttggtga tgagctcgag gaccatgaag gccaactcct cgcctgatcc cagacgctta
     3121 gggaatagca ccgactcgcc gaggtgcgct ttgaaggcct cactttgttc accctcgccg
     3181 tagatcgggg tgtcgatgag acccggggca atggtgttga cccgcacccc aacagcagcc
     3241 aggtcccggg cgatcggaag agtcatgccg acgatgccgc ccttggaagc cgagtaggca
     3301 gcctgaccga tctgcccatc gaaagcggcc acc
//
LOCUS       DASCMR010000367         2003 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001802499, whole genome shotgun sequence.
ACCESSION   DASCMR010000367 DASCMR010000000
VERSION     DASCMR010000367.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2003)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2003)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2003
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001802499"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..428)
                     /locus_tag="QGG16_08590"
     CDS             complement(<1..428)
                     /locus_tag="QGG16_08590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HJP25371.1"
                     /translation="MTSIAIIGTGYVGLTSGACFARLGHDVACVDVDADKVARLSAGD
                     VPIVEEGLDALVAEGLGSGRLRFTTDVAEGVADRAVVFLCVPTPHSPDGSVDLSYVEA
                     AASSLGPLLTPGAVVVNKSTVPVGTTRVVKRLLDRDDVTVA"
     gene            complement(496..1671)
                     /gene="moeB"
                     /locus_tag="QGG16_08595"
     CDS             complement(496..1671)
                     /gene="moeB"
                     /locus_tag="QGG16_08595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HJP25372.1"
                     /translation="MATFRDLLRDAKSRITETDPAGAEALLAAGHLLLDVREPDEFEQ
                     GAVPGSVHIPRGNLEASIESRVDDRDQPLVVMCAGGVRSAFAADTLQQLGYTNVVSMD
                     GGFNRWKDEGRDWRTPRTLSPDQRNRYQRHVLLPEVGEEGQLKLLDASVLLLGAGGLG
                     SPAALYLAAAGVGRIGIVDMDVVDESNLQRQILHNLDRIGERKVDSAKKTLTAINPDV
                     DVVTYDVRLGADNIMDILAGYDVVIDGADNFPSRYLLNDASVKLGVPVVHGSIFRFEG
                     QVTVFDPRDGVTYRDMLPEPPPAEFAPSCAEAGVLGVLPGIVGSIQALEAIKLILGLG
                     EGLSGRLVAFDAMDMSFREYRLQRDPSLEVTWENRDRIEITELDGLCMPKVTTPHEG"
     gene            complement(1728..>2003)
                     /locus_tag="QGG16_08600"
     CDS             complement(1728..>2003)
                     /locus_tag="QGG16_08600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012222737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent deacetylase"
                     /protein_id="HJP25373.1"
                     /translation="GGLLKRATVSFGQALFEGDLDRSLAAAADADLLLAVGSTLAVGP
                     VNLMVPTAVQAGRAVVVVNGSPTDMDDLAEVVVRGSISELLPTILGS"
BASE COUNT          342 a          699 c          654 g          308 t
ORIGIN      
        1 gccaccgtga cgtcatcgcg atccaggagc cgcttgacca cccgggtcgt ccctaccggc
       61 acggtcgact tgtttacgac cacggccccc ggcgtcagca gcggccccag agacgatgct
      121 gctgcttcga cgtaggacag gtcgaccgac ccgtcgggcg aatggggcgt ggggacgcag
      181 agaaagacca ccgcacgatc agcgacccct tcggccacat cagtggtgaa tctcaaccga
      241 ccggacccaa gtccctctgc caccagggcg tccaggcctt cctccacgat cggaacgtct
      301 ccggccgaca accgggccac cttgtcggca tcgacgtcga cacacgccac gtcgtgcccc
      361 agacgggcga aacacgcgcc gctggtcagc ccgacatagc cggtcccgat gatggctatc
      421 gaggtcatcg gggcaagtct cgcagcacct ggagccaacc ccgacgcgcc ggttgcccga
      481 cgctccagaa gcaggtcagc cttcgtgcgg ggtagtcacc ttcggcatgc agaggccgtc
      541 cagttcagtg atctcgatgc ggtcccggtt ctcccaggtc acctcgaggg acgggtccct
      601 ttgcaggcgg tactcccgga acgacatgtc catggcgtcg aaggccacca ggcgtccgga
      661 caggccctcg cccaggccga ggatcaactt gatggcctcc agcgcctgga tcgagccgac
      721 gatgcccggc agcacgccca gcactccggc ctcggcacag ctcggggcga actcggctgg
      781 gggcggctcg gggagcatgt cccggtaggt gaccccatcc cggggatcga acaccgtgac
      841 ctggccctcg aagcggaaga tggaaccgtg caccaccggc acgccgagct tcaccgaggc
      901 gtcgttgagc aggtagcggc tagggaagtt gtcggctccg tcgatcacca cgtcgtatcc
      961 ggcgaggatg tccatgatgt tgtcggcgcc gaggcgaacg tcgtaggtga cgacgtcgac
     1021 gtccgggttg atcgcggtga gggtcttctt ggccgagtcg accttgcgtt cgccgatccg
     1081 atccaggttg tggagtatct ggcgttggag attcgactcg tcgaccacgt ccatgtcgac
     1141 aatgccgatc cgtcccaccc cggcggccgc caggtacagg gcggccgggg agcccagacc
     1201 gccggccccc agcagtagga cgctggcgtc caacaacttc agctggccct cctcgcccac
     1261 ctcgggcagg agcacgtggc gctggtagcg gttgcgctgg tcggggctca aggtccgcgg
     1321 ggtgcgccag tcgcgaccct cgtccttcca acggttgaag ccgccgtcca tggagaccac
     1381 gttggtgtag cccagctgct ggagggtgtc ggcggcgaac gccgagcgga ccccgccggc
     1441 acacatgaca acgagtggct ggtcccggtc gtcgacccga ctctcgatgc tggcctcgag
     1501 gttgccccgc gggatgtgga ccgagccggg aaccgccccc tgctcgaact cgtcgggctc
     1561 gcggacgtcg aggaggaggt gtccggctgc cagcaacgcc tcggcgcccg ccgggtcggt
     1621 ctcggtgatc cgggacttag cgtcccgcag gagatctcga aaggtggcca taccaaaatc
     1681 ctaccgatct ggtcgggatt cgaccaccgg acggttcgcc gatcgcgtca tgaaccgagg
     1741 atggtcggca gcagttcgct gatcgacccc cggaccacca cttcggccag atcgtccatg
     1801 tcggtcggcg aaccgttcac cacgaccacc gcccgaccgg cctgtacggc cgtcggaacc
     1861 atcaggttca ccggaccgac ggccagcgtc gatcccacgg ccaacaggag gtcggcgtcg
     1921 gccgccgcgg ccagcgaccg gtccaggtcg ccctcgaaaa gcgcttggcc gaagctcacg
     1981 gtggcccgct tcaacaggcc gcc
//
LOCUS       DASCMR010000368         2168 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001802528, whole genome shotgun sequence.
ACCESSION   DASCMR010000368 DASCMR010000000
VERSION     DASCMR010000368.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2168)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2168)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2168
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001802528"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(18..413)
                     /locus_tag="QGG16_08605"
     CDS             complement(18..413)
                     /locus_tag="QGG16_08605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25374.1"
                     /translation="MQILAALFFEGIDLRSVAGGATHIDLTGIQFSASSPTEPPVSWA
                     PHLIVVVRCPDDHSGQGVLEVVFSRDGAQVARNVQPLSVEPGRFGYRLVRAELEFAEF
                     GTVEAACRVDQGPATVVPFTLLPPPGPSA"
     gene            521..1996
                     /gene="dacB"
                     /locus_tag="QGG16_08610"
     CDS             521..1996
                     /gene="dacB"
                     /locus_tag="QGG16_08610"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: protein motif:HMM:NF014200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004175 - endopeptidase activity [Evidence
                     IEA];
                     GO_function: GO:0009002 - serine-type D-Ala-D-Ala
                     carboxypeptidase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine
                     carboxypeptidase/D-alanyl-D-alanine-endopeptidase"
                     /protein_id="HJP25375.1"
                     /translation="MNRRFVLPLLLLTITVLSALQAQRTNRAIAASEIVPPARSPASV
                     DTPALSVRRIPEFLQSPTAERRLREELVAPVEALPPGTCLAVAEHGLDLVSLESLTPM
                     APASTQKLLTALAALHVLGPDSVLTTKVVVEEPSVDGVVLGDLWLVGGGDPLLMTTPY
                     ADRFDDPFAYSDLADLADAVVASGIREVQGSVVGDESRYDAIRYLGTWPDRFKPGWSI
                     QSGPLSALSVDDGFTNWDAVNPASSLSVPSDDPAILAARLFDDHLESRGVVIRGRVDS
                     GTVPGAPGWRTVASLDSVPVRLLVEQMLVESDNTTAELLIKEMGHTPTDRGTTVRGLS
                     VLLDALGAAGHPVEGVVPHDGSGLDPDNRLTCGLLASILDDQKVGSVLVDALPVAGDR
                     GTMKKRFVGTAGEGRVRAKTGTLRGVSSLAGVIDTPGGRRLAFALISNGELPYEIRDL
                     HEEVVLSMLSYPSGPVVDLLSPRPLLNPATADSVAAETSGG"
BASE COUNT          354 a          670 c          739 g          405 t
ORIGIN      
        1 gtatgagccc atggaactca ggccgagggg ccgggagggg ggagcagggt gaagggcacg
       61 acggtggccg gtccctggtc gacccgacac gccgcctcga cggtcccgaa ctccgcgaac
      121 tcaagttccg cccggaccag gcgatagccg aagcggccgg gttccaccga tagtggctgg
      181 acattgcggg ccacctgcgc gccgtcacgg ctgaagacca cctccagtac gccctggccg
      241 ctgtggtcat cggggcagcg cacgaccact atcaggtgcg gggcccagga gaccggtggc
      301 tccgtggggg aagaggcgct gaactggatg ccggtcaggt cgatatgggt cgctccgccg
      361 gccaccgacc ggaggtcgat gccctcgaag aagagtgcgg cgaggatctg catacggtga
      421 acctaggacg tcaggatctc ggaacgatgt ctggcgctcc tgataaccag ctcaaagagc
      481 gccccgtcgc tcaagggttc gagtcgtagc atgctgctcc gtgaaccggc gcttcgtact
      541 cccactcctg ctgctcacca tcactgtgtt gtccgccctc caggcccaga gaacaaaccg
      601 tgccatagcg gcctccgaga tcgttccccc ggcgaggtcg cctgcatcgg ttgatacccc
      661 ggcgctgtcc gtgcggagga ttccggagtt cctgcagtca cctaccgcgg aacggcgcct
      721 ccgtgaagag ctcgtcgccc cggtggaggc ccttccacca gggacatgcc ttgcggtggc
      781 cgagcacggc ttagacctcg tttctctgga gtcgttgaca cccatggccc cggccagtac
      841 ccaaaagcta ttgaccgccc ttgccgcatt acacgtcctg ggtcccgatt cggtactcac
      901 caccaaggtg gtagtcgagg aaccatcggt cgacggcgtg gtgctcgggg atctctggct
      961 agtcggtggt ggagatccac tgctgatgac gaccccctat gccgaccgct tcgatgatcc
     1021 atttgcctat tccgacctgg ctgatctagc tgacgccgtg gtggcctcgg ggattcggga
     1081 ggttcagggt tcggtggtgg gagatgagtc ccggtacgac gccatccgtt acctagggac
     1141 gtggccggat cgattcaagc ccggctggtc gatccagtcg ggtccgttga gcgcgctctc
     1201 ggtggatgac ggtttcacga actgggacgc ggtcaatccg gcgtcctcat tgagcgtgcc
     1261 ctctgatgac ccggccatcc tggcggcacg gctgttcgat gaccatctcg aatctcgggg
     1321 cgtggtgata cggggccgcg tggattccgg cacggtgcct ggtgcgcccg gctggcgcac
     1381 ggtggcctcc ctggactccg tgcccgtgcg cctgctagtc gaacaaatgc tcgttgagag
     1441 tgataacacc accgcagaac tgttgatcaa ggagatgggc cacacgccca ccgacagggg
     1501 aacgaccgtc aggggccttt ctgtgctcct cgatgccctt ggggcagccg gccaccccgt
     1561 ggaaggggta gttccacatg atgggagtgg actggacccg gataaccgat tgacctgcgg
     1621 actactggcg agcatcctcg acgatcagaa ggtgggatcg gtcctggtgg acgccctacc
     1681 ggtggccggc gaccggggca cgatgaagaa gcggttcgtg gggaccgccg gcgagggtcg
     1741 cgtgagggcc aagacgggga cgctgcgggg ggtgagcagc ttggccggcg tgatcgacac
     1801 cccgggcggc cgacggctgg cctttgccct gatcagcaac ggcgagttgc cgtacgaaat
     1861 ccgggacctt catgaggagg ttgtcctgtc catgctctcc tatccgtcgg ggccggtagt
     1921 cgacctgctg tcgccccgcc ctctgctgaa tcctgcgaca gccgattcgg tggcggccga
     1981 gacctcgggg gggtgacggt gggcgaggtt cgacggttgc cgatgtttcc gttgggcgcc
     2041 gtcctaatgc cctccgggtt cctgcctctg cacatttttg aggaccgcta ccgacagttg
     2101 attcttgacc tgatggccgg ggatcgagag ttcggtgttg tcctgatccg ccgggggagc
     2161 gaggtcgg
//
LOCUS       DASCMR010000369         1589 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001806399, whole genome shotgun sequence.
ACCESSION   DASCMR010000369 DASCMR010000000
VERSION     DASCMR010000369.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1589)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1589)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1589
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001806399"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..453
                     /locus_tag="QGG16_08615"
     CDS             <1..453
                     /locus_tag="QGG16_08615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HJP25376.1"
                     /translation="VDTSGFYPGKDLEWRGMIRYGAQMAFAYARATVPRVCVTLRKSY
                     GGAYIVMDSRYMGNDLMLAWPSAEIAVMGAKGAVEILHRKATEDERSDLVAAYEDRLL
                     NPYIAAERGSVDRVIEPADTRAELAAALEVLSGKRERLPRRRHDNTPL"
     gene            627..>1589
                     /locus_tag="QGG16_08620"
     CDS             627..>1589
                     /locus_tag="QGG16_08620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015799226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046912 - acyltransferase activity, acyl
                     groups converted into alkyl on transfer [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate/2-methylcitrate synthase"
                     /protein_id="HJP25377.1"
                     /translation="MAETITITDNRTGESIEVPLVDGTVDAKAWRGLLPGIWFDDPSF
                     SATSGADSAITFLDGDAGLLRYRGYPIEQLAGSTSFLEVAHLLVRGELPNGPQLKAWK
                     SEISEAAPIHENFHKRILEGFRDDAHAMGVLVSSIAAMSTFWPDSKNIEDPDQRRYEI
                     VRLIAKMPTVAASAYRRSEGLPYVLPDPDLDYTSNFLAMMFKTGDAPYVVDPILRDAM
                     DMLFVLHADHEQNCSTTTARVVGSAHADPYVTVSAAASALYGPRHGGANEAVLRMLTQ
                     IGKYENVDAFMDGVKAGDQKLMGFGHRVYKNYDPRARIVKDTAHR"
BASE COUNT          308 a          553 c          468 g          260 t
ORIGIN      
        1 gtcgacacat cgggcttcta ccccggcaag gacctggagt ggcggggcat gatccgctac
       61 ggcgcccaaa tggcgttcgc ctacgcccgg gccaccgtgc ccagggtgtg cgtgacgctc
      121 cgcaagtcct acggcggcgc ctacatcgtc atggactccc gttacatggg caacgacctg
      181 atgctggcct ggccatcggc cgagatcgcc gtcatgggtg ccaagggcgc cgtggagatc
      241 ctccaccgca aggccaccga ggacgagcgg tccgaccttg tagcggccta cgaggaccga
      301 cttctcaacc cgtacatcgc tgccgaacga ggctcagtgg accgcgtcat cgaaccagcg
      361 gacacccgtg ccgaactggc tgccgccctc gaggtcctct cgggcaagcg ggagcggctt
      421 ccccgacgcc gccacgacaa cacgcccctc tgacccgaga tgtggtgctg aggcctcctg
      481 aaacagtgac aggtacgcgt attagagaga acttcttggc ttcttcgggc tgatcgccca
      541 cgaccagacc cctcccctcc cggtacctta gaaacagtac gaggattcgg gcggataact
      601 cagaagcgcc cagaaaggac cggaccgtgg ctgagaccat caccatcact gacaaccgca
      661 ccggcgaatc gattgaggtc cccctcgtcg acggcaccgt ggacgccaag gcctggagag
      721 gcctgcttcc gggcatctgg ttcgatgatc cttcattcag cgccacctcg ggggcggaca
      781 gcgccatcac cttcctggat ggcgatgcgg gcctcctgcg ctaccgcggt taccccatcg
      841 agcagctggc cgggtccacc tcattcctag aggtcgccca cctgctggta cgcggcgagc
      901 tccccaacgg tccgcagctc aaggcctgga aatcggagat ctccgaagcg gcaccgatcc
      961 acgagaactt ccacaagcga atccttgaag gcttccgcga cgacgcccac gccatgggcg
     1021 ttctggtgtc gagcattgcc gcgatgtcga ccttttggcc ggactcgaag aacatcgaag
     1081 atcccgacca gcgtcgttac gagatcgtcc ggctgattgc caagatgcct accgtggcgg
     1141 ccagcgccta ccgccgcagc gagggcctgc cctacgtcct ccccgatccg gaccttgact
     1201 acacgtcgaa cttcctggcc atgatgttca aaaccggcga tgcgccctac gtggtggatc
     1261 cgatcctgcg tgatgccatg gacatgttgt tcgtgctgca cgccgaccac gagcaaaact
     1321 gctcgaccac gacagcccgg gtagtgggca gcgcccacgc cgacccctac gtgacggtgt
     1381 ccgccgccgc ctcagcgctc tacggccccc gtcacggtgg cgccaacgaa gccgtacttc
     1441 gcatgctgac ccagatcggc aagtacgaga acgtggatgc cttcatggac ggcgtcaagg
     1501 ccggcgatca aaagctcatg ggcttcggcc accgggtcta caagaactac gaccccaggg
     1561 ccaggatcgt gaaggacacc gcccaccgg
//
LOCUS       DASCMR010000370         4635 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001817428, whole genome shotgun sequence.
ACCESSION   DASCMR010000370 DASCMR010000000
VERSION     DASCMR010000370.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4635)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4635)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4635
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001817428"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..238
                     /locus_tag="QGG16_08625"
     CDS             <1..238
                     /locus_tag="QGG16_08625"
                     /inference="COORDINATES: protein motif:HMM:NF019303.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HJP25378.1"
                     /translation="TRASIDTWTRARPSGVVRAKGLIRVNDRPDDRTVLQVCGSSSTV
                     TVDGPWDGGDDAVVAIALPGTPRAALVKWLNLLD"
     gene            complement(281..811)
                     /locus_tag="QGG16_08630"
     CDS             complement(281..811)
                     /locus_tag="QGG16_08630"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease H"
                     /protein_id="HJP25379.1"
                     /translation="MPNSDRLFDPSAADEPARVGNNSASVDGESAGEQVVAYTDGACS
                     GNPGPGGWAWVVPDGPYAAGCAVETTNQRMELTATLEAVRAFAGPLLVVSDSTYVVHC
                     FRDGWWEKWLRKGWVNAKKEPVANRDLWEPLIEAVQARGNGEFRWVKGHSGDRWNDEA
                     DRLAVEAGTRQVGLKG"
     gene            879..3680
                     /gene="aceE"
                     /locus_tag="QGG16_08635"
     CDS             879..3680
                     /gene="aceE"
                     /locus_tag="QGG16_08635"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004738 - pyruvate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HJP25380.1"
                     /translation="MIDGFINQLPDGDPGETREWIDSFDSLVDQSGRRRGRFMLAKLL
                     ERAGELNVGHAPPTWTPYVNTIATEDQPWFPGDEHIERRIRAFIRWNAAAMVINANKT
                     ADGIGGHLSTFASSASLYEVGYNWFFRGKDDGRPGDHVYFQGHAAPGVYARAFLERRL
                     EERHLDRFRMEIGGDGLSSYPHPRLMPDFWEFPTVSMGLGPINSIYHARFNKYVQNRR
                     IDDTSESRVFSFLGDGECDEPETLGAISLAGRSGLGNLIWIVNCNLQRLDGPVRGNGQ
                     IIQELEGVFRGAGWNVLKVIWGSEWDELIHADVDGVLLNKFNSTVDGEYQRLAVEGGD
                     YVREHFFGPDPRLRAMVEHLSDQQLADLPRGGHDYQKVYAAYRNATEENDAPTVILAK
                     TIKGWTLGPGFEARNATHQIKKMTANELLALRERLHLEDEIPESALAGDRAPYYRPAE
                     DSPENEYMVQRRRALGGSIPKRRIRNRRPLTMPDPSVFAGLSKGSEGRAVSTTMAMTN
                     LLRDLMRDEAFGPRVVPIVPDEARTFGMDSLFREFGIYAPFGQLYEPVDHELLLSYSE
                     STDGQLIEEGITECGSMSSFIAAGTTYANLGVPMVPFYTFYSMFGFQRVGDSIWSAAD
                     SRARGFLLGATAGRTTLAGEGLQHQDGHSLLLAATVPACQAFDPAFAYEVGAIIEDGL
                     TRMYGSDEPHGNEDVFYYVTLYNEAYEMPPRPDHVTAEDVVRGLYLWADAPDGSGSIG
                     ASPNSARARATLMFSGSAQGAARAATAELSERWDVAVDLWSATSYKRLREEALAVERR
                     NRLHPMDPAEVPLVTRLLSDGEGPVVAVSDYQKLVPGQVARWIPRPYHTLGTDGFGRS
                     DTREALRRFFEVDTGHVVVAVLHALAREGTIDPAVVAEAIAHHGLDTEIADPGRADTV
                     PEPGQGVGHSDGDDGARST"
     gene            3723..4331
                     /locus_tag="QGG16_08640"
     CDS             3723..4331
                     /locus_tag="QGG16_08640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HhH-GPD-type base excision DNA repair protein"
                     /protein_id="HJP25381.1"
                     /translation="MTSPPARSKGNPPGTLAITGDEAADRLLNTNPLALLIGMLLDQQ
                     VPMEWAFKGPATLAGRLGHLDPEAIAAADPEAFLETCSSKPAIHRFPRSMAGRIQDLC
                     RHLVDHHDGDAANVWVGATDGADLAHRLQALPGYGAEKTKIFVAILAKRMGYRPDGWE
                     AAAGPFADDVPRSVADIDGPEALTTVRAWKKAQKAAGKTKQQ"
     gene            complement(4404..>4635)
                     /locus_tag="QGG16_08645"
     CDS             complement(4404..>4635)
                     /locus_tag="QGG16_08645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HJP25382.1"
                     /translation="GIDLTIRELAEAVRDLVHPDGELVFDTSKPDGMPRKVLDVSRLA
                     ALGWTASTPLSDGLAATYDWFLEAEAEGNLRL"
BASE COUNT          801 a         1657 c         1431 g          746 t
ORIGIN      
        1 cacccgcgcc tcgatcgaca cctggacacg agcccgaccc agcggagtcg tccgagcaaa
       61 gggcctcatc cgcgtcaacg accgaccgga tgatcgcacc gtgcttcagg tctgtgggtc
      121 gtcctccacg gtcaccgtcg acggaccgtg ggacggtggc gacgacgccg tggtggccat
      181 cgccctgccc ggtactcccc gggccgccct cgtgaagtgg ctgaacctgc tcgactgatc
      241 tggccgaccc acacgtgagg cagaccgcgg aaccgagtcc ctagcccttc agacccacct
      301 gtcgggtgcc tgcctcgaca gcgaggcgat cggcttcgtc gttccaccga tcacccgagt
      361 ggcccttcac ccagcggaac tcgccattcc cccgtgcctg gaccgcctca atcagcggct
      421 cccacaaatc ccggttggct actggttcct tcttggcgtt gacccagccc ttgcggagcc
      481 acttctccca ccagccatcc cggaagcagt gcacgacgta cgtcgagtca ctgaccacca
      541 gcagtgggcc agcgaaggcc cgcaccgctt ccaacgtggc cgtcagctcc attcgttgat
      601 tggtcgtctc aacggcgcac ccggcggcgt acggaccgtc gggcaccacc cacgcccaac
      661 ctccagggcc ggggtttccc gagcacgcac catccgtgta ggcgaccacc tgctcgccgg
      721 ccgactcgcc gtccaccgac gcagaattat ttcccacccg ggccggctca tcggctgcgg
      781 acggatcgaa cagtcggtcg gagttgggca cggtcagcga ccctacccac acagccgtca
      841 ttacctagcg aaccgactcg gcatgggaga ctgccgacgt gatcgacgga ttcatcaacc
      901 aactcccgga tggcgacccc ggcgagaccc gggagtggat cgactccttt gactcacttg
      961 tcgaccagtc gggtcgacgt cgcggtcgat tcatgctggc caaactcctg gaacgcgccg
     1021 gcgaactcaa cgtcggccat gcgccaccta catggactcc gtacgtcaac accatcgcta
     1081 ccgaagacca gccgtggttc ccgggtgatg agcacatcga acgacgcatc agggccttca
     1141 tccgttggaa cgccgctgcc atggtcatca acgccaacaa gaccgctgac gggatcggcg
     1201 gccacctctc gacgttcgcc tcgtcggcct ccctctacga ggtgggctac aactggttct
     1261 tccggggcaa ggacgacggc cgccccggcg accacgtcta cttccagggc cacgccgctc
     1321 ccggcgtgta cgcccgggcc ttcctggaac gccggctgga ggaacgccat ctggaccggt
     1381 tccgcatgga gatcggcggc gacggcctgt ccagttaccc ccacccccgc ctcatgcccg
     1441 acttctggga gttccccacc gtctcgatgg ggctcggacc gatcaactcc atttaccacg
     1501 cccgcttcaa caagtacgtc cagaaccgcc ggatcgacga cacgtcggag agccgggtgt
     1561 tcagctttct gggcgacggc gagtgcgacg aacccgaaac cctgggcgcc atctccctgg
     1621 ccggccggtc gggcctgggc aacctcatct ggatcgtcaa ctgcaacctg cagcgactcg
     1681 acggcccggt ccggggcaac ggccagataa tccaggaact ggagggtgtg ttccggggcg
     1741 ccggctggaa cgtcctcaag gtcatctggg gttcggaatg ggacgagctg atccacgctg
     1801 acgtcgacgg ggtcctcctc aacaagttca actccaccgt cgacggtgag taccagcgcc
     1861 tggccgtcga gggcggggac tacgtccggg aacacttctt cggccccgat ccccgcctca
     1921 gggcgatggt cgaacacctg tcggaccagc agttggccga cctacctcgg ggcggtcacg
     1981 actaccagaa ggtctacgcc gcctaccgca atgccaccga ggagaacgac gcccccacgg
     2041 tgatcctggc caagaccatc aagggctgga cgctcggccc gggcttcgaa gcccgcaacg
     2101 ccacccacca gatcaagaaa atgacggcca acgaactgct ggccctgcga gagcgcctcc
     2161 acctggagga cgagatcccc gagtcggccc tggccggcga ccgggcgccc tactaccggc
     2221 ctgccgagga cagtcccgag aacgagtaca tggtgcaacg ccgtcgggca ctcggtggtt
     2281 cgatccccaa gcgtcggatc cgtaatcggc gcccactcac catgcccgac ccgtcggtgt
     2341 tcgccgggct ctccaaggga tccgagggtc gggccgtgtc gaccacgatg gccatgacca
     2401 atttgttgcg cgacctcatg cgcgacgagg cgttcggtcc acgcgtggtg cccatcgttc
     2461 ccgacgaggc ccgcacgttc ggcatggact cgctgttccg ggagttcggc atctacgccc
     2521 cgttcggcca gctctacgaa ccggtcgacc acgagctgct gttgtcgtac agcgagagca
     2581 ccgatgggca gctcatcgaa gagggcatca ccgaatgtgg gtcgatgtcc agcttcatcg
     2641 ccgccggtac gacctacgcc aacctcggcg tgccgatggt gcccttctac accttctatt
     2701 cgatgttcgg cttccaacgg gtcggtgact caatctggtc ggctgccgat tcaagggctc
     2761 gaggcttcct cctgggggcc acggctggac ggaccacgct ggccggcgaa ggccttcagc
     2821 accaggacgg ccacagcctc ctcctggccg cgaccgtccc agcgtgtcag gccttcgacc
     2881 cggcgttcgc ctacgaggtg ggcgccatca tcgaggacgg cttgacccgg atgtacggaa
     2941 gcgacgagcc ccatgggaac gaggacgtct tctactacgt gacgctctac aacgaggcct
     3001 acgagatgcc tccccggccc gaccatgtca ccgccgagga cgtcgtccga gggctctacc
     3061 tctgggcgga tgctcccgat gggtccggtt ctataggggc tagtccgaac tcggctcgcg
     3121 ctcgggcgac gctgatgttt tccggttcag cacagggagc ggcccgggcc gccaccgccg
     3181 aactctccga acggtgggac gtcgccgtgg atctctggag tgccacctcc tacaagcggc
     3241 tccgagagga agccctcgcc gttgagcgcc gcaaccggct ccacccgatg gatcccgccg
     3301 aggttccgct ggtgacccgg ctgctgtccg acggcgaggg gccggtggtc gctgtatcgg
     3361 actaccagaa gctggttccc ggccaggtgg cccgttggat ccctcgcccg taccacaccc
     3421 tcggtaccga cggttttggc cgcagcgaca ctcgcgaggc gctgcgccgc ttcttcgagg
     3481 tggacaccgg tcatgtggtg gtagccgtgc tgcacgcctt ggcccgtgag ggcaccatcg
     3541 acccggccgt ggtcgccgag gccattgccc accacgggct ggacaccgag atcgccgatc
     3601 ctggacgagc tgacacggtg cccgaacccg gccagggcgt ggggcatagc gacggggacg
     3661 atggtgctcg cagcacctga tccggtctcc tgacccggcg agccgaccgg taggttcagc
     3721 gcatgacttc cccaccagca cgttctaagg gcaacccgcc gggcacgctg gccatcaccg
     3781 gcgacgaggc cgccgaccgt ctgctcaaca ccaacccgtt ggccctgctt atcggcatgc
     3841 ttctggacca gcaggtccca atggaatggg cgttcaaggg gccggccacc ctggccggcc
     3901 gccttggcca tctcgatcct gaagccatcg cggcggccga ccccgaggcg ttcctcgaaa
     3961 cctgtagctc taagccggcc atccaccgct tcccccgctc gatggccggc cgcatccagg
     4021 acctgtgccg gcacctcgtc gaccatcacg acggtgatgc cgccaacgtg tgggtcggtg
     4081 ctaccgacgg agccgacctg gcccaccgac ttcaggcgct gcccggctac ggcgccgaga
     4141 agacgaagat cttcgtggcc atcctggcca aacggatggg ctatcggccc gacggctggg
     4201 aggctgcggc cggcccgttc gccgatgacg taccccgatc ggtggccgac atcgacggcc
     4261 cggaagcact caccaccgtg cgggcctgga agaaggccca gaaggccgcc gggaagacca
     4321 agcagcagta gcggacactc cgccgacaga atccgggcga atccgggcga atccgggcga
     4381 atccgggcga atccgggctc cggctagagg cgcaggttgc cctcggcctc tgcttccagg
     4441 aaccagtcgt aggtggcagc gagtccgtcg gacagtggcg tcgatgccgt ccagcccagg
     4501 gcagccagac gggatacgtc gagcaccttg cggggcattc cgtccggctt gctggtgtcg
     4561 aacaccaact ctccgtccgg gtggaccagg tcccgaaccg cctcagccag ttctcggatg
     4621 gtcaggtcga tgccc
//
LOCUS       DASCMR010000371         2069 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001821362, whole genome shotgun sequence.
ACCESSION   DASCMR010000371 DASCMR010000000
VERSION     DASCMR010000371.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2069)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2069)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2069
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001821362"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            63..1166
                     /locus_tag="QGG16_08650"
     CDS             63..1166
                     /locus_tag="QGG16_08650"
                     /inference="COORDINATES: protein motif:HMM:NF012766.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro peptidase family protein"
                     /protein_id="HJP25383.1"
                     /translation="MTNGTVDGLPPLAVADRLDALRALFDDAGVDALLVTGTTNVRYL
                     TGFTGSAGNLWVDDRQAVLITDGRYSQQAPTQIADAGTPVDVEVPASSDQSPVTALAA
                     GSTRIGLEARSVTWSEQQRLAKLLDDDPVATDGLVEALREVKDDGEVARIATAAAIAD
                     RAFAEVQPTMVAGTTEADLALALDHAMRTGGASDRAFETIVAAGPNSALPHARPGFRP
                     LADGDLVVCDFGAVYDGYRSDMTRSFRVGGSGSGQEANLLSAVLDAQEAGLALVADGV
                     PLAEIDRACRDILVEAGLGEAFSHGTGHGVGLDIHEGPAVASTASGSLRAGQVVTVEP
                     GAYVAGIGGVRWEDTVLVTSDGHRPLTGYPKIL"
     gene            1207..1770
                     /gene="efp"
                     /locus_tag="QGG16_08655"
     CDS             1207..1770
                     /gene="efp"
                     /locus_tag="QGG16_08655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015799108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HJP25384.1"
                     /translation="MPTITTNDLKNGMTLEIEADLVQVVEFQHVKPGKGHAFVRTTLR
                     NVRTGSVVDRTFRAGEKVQRAMIDKRSMQFLYRDGADYVFMDDQTYDQMQVAPSTLGD
                     ASNYIVEQATAIILLFGEEVIGVELPASVDLDITETEPGLQGDRVSGARKPATLETGL
                     TVQVPLFIENGERVKVDTRSGEYLSRA"
     gene            1812..>2069
                     /locus_tag="QGG16_08660"
     CDS             1812..>2069
                     /locus_tag="QGG16_08660"
                     /inference="COORDINATES: protein motif:HMM:NF013216.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HJP25385.1"
                     /translation="MAADPVDAIGSRREARETALGVLYAAEAQGRDLLEVLADRPVAP
                     SEYAVEIVQGVAATLDELDELIGRHAEGWRTDRMPAVDRALL"
BASE COUNT          399 a          695 c          677 g          298 t
ORIGIN      
        1 gccggcttcg gagctgtcgg ctaccggatg gcagtcgagg cggtagccga cctcctagac
       61 aggtgaccaa cggaaccgtc gacgggttgc cgccgctagc cgtagccgat cgacttgacg
      121 ccctacgcgc cctgttcgac gacgccgggg tcgacgccct gctggtcacc ggaaccacca
      181 atgtccgcta cctgaccggc ttcacgggct ccgcaggaaa cctgtgggtc gacgaccggc
      241 aagccgtact gatcaccgac gggcgataca gccaacaggc tccaacccag atagccgatg
      301 caggcacgcc agtcgacgtc gaagtacccg caagcagcga ccagtcaccg gtcaccgccc
      361 tggccgccgg atcaacccgg attggcctgg aagcccgatc ggtcacatgg tccgaacaac
      421 agcgcctagc caaactgctg gacgacgacc cggtagccac cgacggcctc gtcgaggcac
      481 tgcgagaagt caaggacgac ggcgaagtag cacgaatcgc caccgcggca gccatcgccg
      541 accgggcatt tgccgaagtg caaccaacca tggtcgccgg aaccacagag gccgacctgg
      601 ccctggccct cgaccacgcc atgcggaccg gcggcgcgtc ggaccgagcg ttcgagacaa
      661 tcgtggccgc tggccccaac agcgccctgc cccacgcccg acccggcttc cgaccattgg
      721 ccgacggaga cctggtggta tgcgactttg gggcggtgta cgacggctac cgatccgaca
      781 tgacccgctc cttccgggtt ggagggtcgg gctccggcca ggaagccaac ctgctgtccg
      841 ccgtcctaga cgcccaagaa gccggactgg ccctggtggc cgacggcgtg ccgctagccg
      901 agatagatcg ggcgtgtcgt gacatcctcg tggaggcagg tctaggggag gccttctcgc
      961 acggaacggg ccatggcgta ggcctcgaca tccacgaggg cccggccgtg gcctccacag
     1021 ccagcggtag cctcagggcc ggacaggtgg tcaccgttga acccggggcc tacgtcgccg
     1081 ggattggcgg cgtgcgctgg gaggacacgg tgctggtcac cagcgacggc caccgtccac
     1141 tcaccggtta cccgaagatc ctctgatcca ccgatcgagt ccgctgcccc cgagtccgga
     1201 gcgaccatgc ccacaatcac caccaatgac ctgaaaaacg ggatgaccct cgagatcgag
     1261 gccgacctcg ttcaggtggt cgagttccag cacgtgaaac cgggcaaggg tcacgccttc
     1321 gtccgcacga cgttgcgaaa cgtccgtacc gggtcggtgg tggatcgcac cttccgggcc
     1381 ggcgagaaag tgcaacgggc catgattgac aagcggtcga tgcagttcct gtaccgagac
     1441 ggcgccgact atgtcttcat ggacgaccag acctacgacc agatgcaggt cgcaccgtcg
     1501 accctcggtg acgcgtcgaa ctacatcgtg gagcaggcca cggcaatcat cctgctgttc
     1561 ggcgaggagg tcatcggtgt ggaactcccg gcatcggtcg acctggacat caccgagacc
     1621 gaacctggcc ttcagggcga ccgggtgtcc ggagcccgta agccggcgac cctggaaacc
     1681 gggctgaccg ttcaggtgcc gttgttcatc gaaaacggtg agcgcgtcaa agtcgatacc
     1741 cgttcgggcg agtacctcag ccgggcctga gactgctgaa caacgagtcg agcagaggga
     1801 ataggcgaac agtggcagcg gatcccgtcg acgcaatcgg atcgcgccga gaagcccgcg
     1861 agaccgccct gggcgtgctc tacgccgctg aggcgcaggg ccgtgaccta ctcgaggtgc
     1921 tggccgaccg gccggtggcc ccgtcggagt acgccgtaga gatcgtgcaa ggggtggctg
     1981 ccacactcga cgagctcgat gaactgatcg gacgtcacgc ggaaggctgg cggaccgacc
     2041 ggatgccggc cgtggaccgg gcgctcctg
//
LOCUS       DASCMR010000372         2244 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001824829, whole genome shotgun sequence.
ACCESSION   DASCMR010000372 DASCMR010000000
VERSION     DASCMR010000372.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2244)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2244)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2244
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001824829"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            106..>2244
                     /gene="alaS"
                     /locus_tag="QGG16_08665"
     CDS             106..>2244
                     /gene="alaS"
                     /locus_tag="QGG16_08665"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HJP25386.1"
                     /translation="MSATPETLLTAAGLRRAFVDFFIENGHHHEASGSLIPHDPTLLF
                     TVAGMVPFKPYFVGEQPAPWDRAVTVQKCVRAGGKHNDLDEVGRTSRHLTFFEMMGNF
                     SFGDYFKSQACAFAWEFVTDVLGLDPERLWITVHVSDDEAEAIWRDEVGVPAERIQRL
                     DEDNYWRMADTGPCGPCSEIFWDKGPAFGDDGGPAHGDDERFIEIWNLVFMQFEQHDD
                     GSMTELPAPSIDTGAGLERILSVLGGVDSVWETDEFDRLLTRIGELSGIPHGSGDRTD
                     VSQRILADHARSSTFMISDGVFPSNEDRGYVLRRIIRRAVRHAWLLGVEDQVMPELVD
                     AVVGIMGPDYPELVRNHAFVRDVLDREEHRFRETLRTGSVILDEALDGLADGGRLDGD
                     VAFKLHDTYGFPLELTEEITAERGLGVDLEGFRAAMADQQTRARSARKSAGGSAAAGD
                     LRAVLEEHGATTFVGREVNEATATVLYADDDVVVLDRTPFYAESGGQIGDTGTLVFEG
                     GTLEVFDTTLALDGLHRHHIQLPDASQSDDGLAVGQEVRATIDIERRAAIRRNHTGTH
                     LLHSALRRVLGDHVKQQGSHVGPDRLRFDFSHFEALTAEQMTAVEDLANADILANPSC
                     NHYETSKDEAEAAGAIAFFGDKYGDTVRVLEAGPHSTELCGGTHVSALGDIGPIRIVA
                     EGSIGSNIRRIEALTGTAPIERLRDVETVLG"
BASE COUNT          388 a          720 c          747 g          389 t
ORIGIN      
        1 gtccgatccg gtcgacgccc ggcgaacgct gagccgttca ttcggagcga ggaccgtcgc
       61 cgaggttcca ccgaccacgg gtggcttccc taggctgggc tgaccatgtc tgctactccc
      121 gagaccctgc tcaccgccgc cggcctccgc cgggcctttg tcgacttctt catcgagaac
      181 ggccaccatc atgaggcatc cgggagcctg atcccccacg acccaacgct gctgttcacg
      241 gtggccggga tggtgccgtt caagccgtac ttcgtgggcg agcagcccgc gccctgggac
      301 agggcagtca ccgtccagaa atgcgtgcgg gccggcggca agcacaacga tctcgacgag
      361 gtgggacgca ccagtcggca tctcaccttc ttcgagatga tgggcaactt cagcttcggc
      421 gactacttca agtctcaggc ctgtgccttt gcctgggagt tcgtgaccga tgttctgggc
      481 ctggatcccg aacgactatg gatcaccgtg cacgtaagtg acgacgaggc ggaggccatc
      541 tggcgtgacg aggtgggtgt ccccgccgag cggatccaac gtctcgacga ggacaactac
      601 tggcggatgg ccgacaccgg tccgtgcggc ccgtgctcgg aaatcttctg ggacaagggc
      661 ccggcgttcg gtgacgatgg tggtccggcc cacggagacg acgagcggtt catcgagatc
      721 tggaatctcg tgttcatgca gttcgagcag catgacgacg ggtcgatgac cgagctgccc
      781 gcgccgtcca tcgacaccgg tgccggcctg gagcggatcc tgagcgtgct gggcggcgtg
      841 gactcagtct gggagaccga cgagttcgat cgcctcctga cccgtatcgg cgaactcagc
      901 gggatccccc acgggtccgg cgaccggacc gacgtgtctc agcggatcct ggctgaccat
      961 gcccggtcgt cgaccttcat gatcagcgac ggtgtgttcc ccagcaacga ggaccgtggc
     1021 tacgtgttgc ggcgaatcat tcgtcgggct gtccggcacg cctggttgct aggtgtcgaa
     1081 gaccaggtca tgccggaact ggtcgatgcc gtcgtaggga tcatgggacc cgactatccg
     1141 gaactggttc gaaaccatgc cttcgtgcgc gacgtcctgg acagagagga gcatcggttc
     1201 cgcgagaccc tgcggaccgg atcggtgatc ctcgacgagg ctctggacgg gctggccgac
     1261 ggtggccgtc tcgacggcga cgtggccttc aagctccacg acacctacgg cttccccttg
     1321 gaactgaccg aggagatcac cgccgagcgt ggcctcgggg tggacctcga gggtttccga
     1381 gctgccatgg ccgaccagca gacccgggcc cggtctgctc ggaaaagcgc gggcgggtcg
     1441 gcggcggccg gtgacctgag ggccgtgctc gaagagcatg gcgccacgac gttcgtgggg
     1501 cgtgaggtca atgaggccac ggcaactgtg ctgtacgccg acgatgacgt ggtggtgctc
     1561 gatcgcacgc ccttctacgc cgagtcggga ggccagatcg gcgataccgg cacgttggtc
     1621 ttcgagggtg gcaccctgga ggtgttcgac accacgctgg ctctcgacgg tctccaccgg
     1681 caccacatcc agttgccgga tgccagccag tcggatgatg ggctggccgt tggacaggag
     1741 gtccgggcga ccatcgacat cgaacggcgg gcagccatcc gacgcaacca caccggaacg
     1801 cacctcctgc attcagccct gcgtcgtgtg ctcggagacc acgtcaagca gcagggctcc
     1861 catgtcggac ccgatcggct ccggttcgac ttcagccact tcgaggccct gaccgctgaa
     1921 cagatgaccg ctgtcgagga cctggccaac gccgacattc tcgccaaccc ctcgtgcaac
     1981 cattacgaga ccagcaagga tgaggctgag gccgcgggtg ccattgcctt cttcggcgac
     2041 aagtacggcg acaccgtgcg ggtgctcgaa gccggaccgc actcgacgga gttatgcggc
     2101 ggcacccacg tatcggccct gggcgatatc ggtccgatca ggatcgtggc cgagggctcc
     2161 atcggttcga acatccgtcg gatcgaagcg ttgaccggta ccgcgcccat tgagcgactc
     2221 cgtgacgtgg agacggtcct gggg
//
LOCUS       DASCMR010000373         2711 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001825388, whole genome shotgun sequence.
ACCESSION   DASCMR010000373 DASCMR010000000
VERSION     DASCMR010000373.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2711)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2711)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2711
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001825388"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..685)
                     /locus_tag="QGG16_08670"
     CDS             complement(<1..685)
                     /locus_tag="QGG16_08670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012229307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/oligopeptide/nickel ABC transporter
                     ATP-binding protein"
                     /protein_id="HJP25387.1"
                     /translation="MAGSGKAHLRPAGEVLVQVEDLVVEFPAAKKRTVKAVSGISLDV
                     KAGETLGLVGESGCGKSTVARSLIQLPPPKSGSVVLDGVELTELSEGQLRTHRTGLQM
                     SFQDPISSLNPRRRVAEIIAEPLRVWGPHDENEQAEIVDRMLHAVGIDPEVARDKRPH
                     EFSGGQCQRISIARSLVLGPQVLICDEPVSALDVSVQAQILNLLRDLKAEYGLTLVFI
                     AHDLAVVKNV"
     gene            complement(685..1794)
                     /locus_tag="QGG16_08675"
     CDS             complement(685..1794)
                     /locus_tag="QGG16_08675"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJP25388.1"
                     /translation="MGGSEILRVEDLHTSFFLPIGELQAVRGVSFSLRRGRSLGIVGE
                     SGSGKSVLARSIMGLNLGSNVKTSGSAFFDGRDLLALSRREMRSLWGTEIAMIFQDPM
                     TSLNPMVKIGRQVIEHLRQHKKVGRSEAKQTALDLLNEVRIPEAESRIDRLPHELSGG
                     MRQRVSIASALACEPSLLFADEPTTALDVTVQHQILNLLSREQRQRNMTMVMVTHDLG
                     VIAGRTDDTLVMYAGKVVEQAPTDEIFEKTQHPYTEALMRSIPRTTHASHTSLAAITG
                     RPPVATHLPVGCAFSLRCPYVQPKCNEEDPPLVSLGTSGHKSACWYPVGSDANREAFE
                     RNLADRLPQTLAVAESLDADQSPGTPAELPDGGIA"
     gene            complement(1858..>2711)
                     /locus_tag="QGG16_08680"
     CDS             complement(1858..>2711)
                     /locus_tag="QGG16_08680"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP25389.1"
                     /translation="SRFGNLFGKMPWLTKICFLWLILVVLAAALADLIPGLADPNYQG
                     FVFGDGKTNEGPTASHWLGTDNVSRDILARLIYGARVSLIFAFSLVAVGIVVGGTLGS
                     IAGYFRGLLETFLMALVDTWLSFPALIGLVFITTMLGMRNLVVLVLVGAVFVWPSYTR
                     IARATALSVSGQAFVTAARAIGTSRKRILVREIFPNVLPALLAYSLVGLPVLIILEST
                     LSFLGLGVEIPTASWGGMINQARQDLLINIWPAVWPAATLFMTVYSFNNLADWVRAQA
                     AARSAAI"
BASE COUNT          552 a          795 c          847 g          517 t
ORIGIN      
        1 tcacgttctt aacgacggcc aggtcatggg caatgaagac cagggtcagt ccgtattcgg
       61 ccttgaggtc acgaagcagg ttgaggatct gtgcctggac actgacgtcg agcgcactga
      121 ccggttcatc gcagatgaga acttggggtc cgaggaccag gctccgagca atggaaatcc
      181 gttggcactg accacctgaa aactcgtggg gtcgcttgtc ccgggcgacc tccgggtcga
      241 taccaacggc gtgcagcatc cggtcaacga tctcggcctg ctcgttttcg tcgtgggggc
      301 cccagacccg cagcggttca gcaatgatct cggcaacccg acggcgggga ttcaaggagc
      361 tgatcgggtc ctggaaactc atctggagtc cggtccggtg agttcttagc tgcccctcgg
      421 acaactcggt caattcgacg ccgtccagga ccaccgaccc gctcttaggc ggaggaagct
      481 ggataaggga acgagcaaca gtcgactttc cgcagcccga ctcaccgaca aggccgagtg
      541 tctccccggc cttgacgtcc agactgatcc cactcactgc tttcacggtg cgttttttgg
      601 ccgccggaaa ctcgactacc agatcctcaa cctggaccag cacttcgccg gcgggacgaa
      661 gatgggcctt ccctgatcca gccattaggc gatccctcca tccggaagtt ctgccggtgt
      721 tcccggactc tgatcagcgt ctaaggattc ggccacggca agtgtttgcg gtaaccggtc
      781 ggcgaggttc cgttcgaacg cctcacggtt ggcatcagac cccaccggat accagcaggc
      841 tgacttatgc cctgaggtgc caagcgaaac cagtggtggg tcctcctcgt tgcactttgg
      901 ctgcacatac gggcaacgga gactgaacgc acaaccaact ggaaggtggg tggccaccgg
      961 tgggcggccg gtgatcgctg ccaacgacgt atggcttgca tgggttgttc gcggaatcga
     1021 acgcatgagc gcttcggtgt acgggtgttg ggtcttttcg aagatttcgt ccgtcggagc
     1081 ctgttccacg accttgcctg cgtacatgac gagggtgtcg tcggttcgac cggcaatgac
     1141 cccaaggtcg tgggtcacca tcaccatggt catgttgcgc tggcgttgct cgcggctcaa
     1201 caggttgagg atctgatgct ggacggttac gtccagagcg gtggtcggct cgtcggcaaa
     1261 gagcagcgac ggctcgcagg ccagggcgct ggcgatggag accctctggc gcatgccgcc
     1321 actgagctcg tggggcaacc gatcgattct ggattcagct tctggaatcc gtacctcgtt
     1381 gagaaggtcg agagcggtct gctttgcttc actgcggccc accttcttgt gttgcctcag
     1441 gtgttcgatg acctggcgtc cgatcttgac cattgggttc agcgaggtca tggggtcctg
     1501 gaagatcatg gcgatctctg ttccccacag gcttcgcatt tcccggcggg acagcgcgag
     1561 gaggtcgcgg ccatcgaaga aggccgatcc gctggtcttg acgttggaac ccaggttgag
     1621 gcccataatc gaccgggcga gaaccgactt gcctgaaccg ctctcaccaa cgatgcccag
     1681 ggaccgcccg cgcctaaggc tgaaactgac cccgcggaca gcctgcagtt cgccgatcgg
     1741 caggaagaag ctcgtatgga gatcctcgac gcgaaggatc tccgatcccc ccatcgactc
     1801 agacgatgtc gaggtgtatg tgggttcttc tgagacggcc atcagagcga ttccatttca
     1861 gatcgcagcg gaccgggcgg ccgcttgtgc ccgaacccag tcggcgagat tgttgaacga
     1921 atagaccgtc atgaacagcg tcgcggcagg ccacacggca ggccagatgt tgataaggag
     1981 gtcctggcgg gcctggttga tcatcccccc ccaggaggct gttgggatct ctaccccgag
     2041 accgagaaaa gacagcgtcg actcaaggat gatcagaact gggaggccga ccaacgagta
     2101 ggcgaggagc gcgggcaaaa cgttggggaa aatttcccga accaaaatcc gtttcctgct
     2161 ggtgccaatg gcccttgccg cggtgacaaa ggcctgcccg ctgaccgaga gggcggtggc
     2221 acgggcaatt cgtgtgtacg acggccagac gaagacggca ccgaccagga ctaggactac
     2281 gaggttgcgc attccaagca tcgttgtgat gaacaccaga ccgatgagag ctgggaacga
     2341 cagccaggta tccacgagag ccatcagaaa ggtctcgagg agtccccgga aatagccggc
     2401 gatcgatcca agtgtgccgc cgacgacgat tcctactgct actagcgaga aggcgaagat
     2461 gagcgagacc ctggctccgt agatcagccg ggcgaggatg tcgcggctga cattgtcggt
     2521 acccagccag tggctggccg tcggaccctc gttggtcttc ccgtcgccga agacgaaacc
     2581 ctggtagttg gggtcggcta ggccggggat caggtcagcc agtgctgccg cgaggaccac
     2641 caaaatcagc cataggaagc agatcttggt cagccacggc atcttcccga acaagttccc
     2701 gaaccgactt t
//
LOCUS       DASCMR010000374         3259 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001827875, whole genome shotgun sequence.
ACCESSION   DASCMR010000374 DASCMR010000000
VERSION     DASCMR010000374.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3259)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3259)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3259
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001827875"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1256)
                     /locus_tag="QGG16_08685"
     CDS             complement(<1..1256)
                     /locus_tag="QGG16_08685"
                     /inference="COORDINATES: protein motif:HMM:NF001813.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HJP25390.1"
                     /translation="MRCEIVAVGTELLLGQIVDTNSAWIGEQLALAGIDCHRHTSVGD
                     NRDRMLAAMGEALERSDAVIVTGGLGPTQDDITRDVIAELLGVELVRDESLVARIEAV
                     FGGRGRPMPANNLRQADVPVGARTIDQMPGTAPGLVCPVGAPSSGDADGDGDDSPKVM
                     YAVPGVPWEMHQMVEGTILPDLKRRAGISSVIRSRTLRTWGRSESGLAEDLADEIDRI
                     DRDGGATIAFLASGMEGLKVRLTAKAATDAEVDALLADGEARVRAIAGPIVFGVDDQT
                     MESVVLDLLVAQGLRLATAESLTGGMIGTRLTEVPGSSRAFMGSIVAYDGEVKRSLLG
                     VPEGPVVSEETVRAMALGACERLGADVSVAVTGVAGPDPQEGQEPGTVWMATCVDGEV
                     QAVRTRWPFDRTRIRQFTVITVLDALR"
     gene            complement(1285..1857)
                     /gene="pgsA"
                     /locus_tag="QGG16_08690"
     CDS             complement(1285..1857)
                     /gene="pgsA"
                     /locus_tag="QGG16_08690"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HJP25391.1"
                     /translation="MKHVRTVVSPANLVTLARLLLAPVLFAFVLDARDVDGVTWAGFV
                     LGVVLASTDYFDGILARRRGTVSRWGAFLDPLADKVVVIGVAVCLGMVGRYHWVPVAL
                     LAFREAVITMYRLWFARRGLAVPARQSAKWKTIVQGTALLVAVLPPLRDADLVVGVLL
                     WLAVAFTLMTGAQYLLDGSRATSATGAKSA"
     gene            complement(1854..3128)
                     /gene="rimO"
                     /locus_tag="QGG16_08695"
     CDS             complement(1854..3128)
                     /gene="rimO"
                     /locus_tag="QGG16_08695"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008172 - S-methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0018339 -
                     peptidyl-L-beta-methylthioaspartic acid biosynthetic
                     process from peptidyl-aspartic acid [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HJP25392.1"
                     /translation="MTGTYHLVTLGCPKNQVDSDKLAGTLAADGMQAVNGAGEADLIV
                     VNTCAFVDEARRESIDTVLALADKRRDGARLVVTGCMAERYGDELAEALPEVDRVAGF
                     GVPVTLGPKPSSGIQPETAPLFDLLNLPRPASDRPWAYVKVAEGCDRACGFCAIPTFR
                     GPQRSRSMDDVLAEVDALDAREIILVAQDLAAFGRDQGVGDKAIVPLVEAVAARVDRV
                     RLLYLYPSELTDRLVDAVCVTGVPYFDLSLQHVSSPLMRRMRRWGDGGRFLERIEAIR
                     AREPEAAFRSNFIVGYPGETEEDHDALLDFVVEAQVDWCGFFAYSAEEGTYAADLDAV
                     VDPGLMAERLGELTEIQDRITADRRDELIGRTVEVLVDEPGVGRTHREAPEIDGVVSV
                     PEDLAVGTFQSVTVTGALGPDLEAMALGPVAA"
BASE COUNT          577 a         1184 c         1031 g          467 t
ORIGIN      
        1 cggagcgcgt cgaggaccgt gatgacggtg aactgccgga tgcgtgtccg gtcgaacggc
       61 caacgggtcc gaaccgcctg gacttcgccg tccacacaag tggccatcca cacggtgccc
      121 ggttcctggc cctcctgcgg gtcgggtcca gccacgccag tcacggccac cgacacgtca
      181 gcccccaggc gttcgcacgc cccgagcgcc atggccctca cggtctcctc ggataccacc
      241 ggcccctcgg gcacgcccag taacgaccgc ttcacttcgc cgtcgtaggc gacaatcgac
      301 cccatgaagg cccggctgga tcccggcacc tcggtcaagc gggtgccgat catgcctccg
      361 gtcagtgact cggcggtggc caagcgaagc ccctgtgcga ccagcaggtc cagcaccaca
      421 gactccatgg tctggtcgtc cacaccgaac acgatcggtc cggcaatagc ccgcacgcgg
      481 gcctcgccgt cggccagtag cgcatccacc tcggcgtcgg tggccgcctt ggccgtgagc
      541 cgtaccttga gcccctccat gccactggcc agaaaggcaa tggtggcccc accgtcacgg
      601 tcgatgcgat cgatctcgtc ggccaggtcc tcggccaacc ccgattcaga ccgcccccag
      661 gtacgaagag tgcgcgatcg tatgacgctc gagatgccgg cccgccgctt gaggtccggg
      721 aggatggtgc cctccaccat ctggtgcatc tcccacggca caccgggcac cgcgtacatg
      781 acctttggac tgtcgtcacc atcgccatcg gcgtcaccgg aagagggggc gcccaccggg
      841 cagaccagtc ccggggccgt ccccggcatc tggtcgatgg tccgggcccc caccggtacg
      901 tctgcctgac gcaggttgtt ggccggcatt ggacgccccc gaccgccgaa cacagcctcg
      961 attcgggcca ccaacgattc atcgcgcacg agctccacgc cgagtagctc ggcgatcacg
     1021 tcacgggtga tgtcgtcttg ggtgggcccg aggccaccag tgactatcac cgcgtcggac
     1081 cgctccagag cctcgcccat ggcagccagc atgcggtccc ggttgtcccc caccgaggtg
     1141 tggcgatggc agtcaatgcc tgccagggcc aactgctcgc cgatccacgc cgagttcgtg
     1201 tcaacgatct gacccagcag gagttcggtg cccacggcga cgatctcgca acgcatgccc
     1261 tgctcccctc cccgacccgg ccgctcaggc cgacttggcg cccgtggcgc tggtggcccg
     1321 actgccgtcc agcaaatact gcgcgcccgt catcagggtg aaagccacgg ccagccacaa
     1381 caacacgccg accaccaggt cggcgtcacg cagcggcggc agcacggcga ccaacaaggc
     1441 agtgccctgc acgatggtct tccacttggc cgactggcgg gccggcacgg ccaggccgcg
     1501 acgagcaaac cacaggcggt acatcgtgat gacggcctca cggaaggcca gcagagccac
     1561 cggtacccag tggtagcggc cgaccatgcc caagcagacg gccacgccaa tcaccacgac
     1621 cttgtcggcc aacggatcca ggaaggcccc ccagcggctc accgtgccac ggcggcgggc
     1681 caggatcccg tcgaagtagt cggtggacgc taggaccacg ccgagcacga agccggccca
     1741 cgtcacgcca tcgacgtccc gggcgtcgag tacgaaggcg aacaacaccg gggccagtag
     1801 cagcctggcc agagtcacca ggttggccgg cgagaccacg gtacggacgt gcttcacgct
     1861 gccaccggtc cgagtgccat ggcctccagg tcgggcccga gggctccggt caccgtcaca
     1921 gactggaagg tacccaccgc aaggtcctcg ggcacggaca ccacaccgtc gatctccggc
     1981 gcctcgcggt gagtgcgtcc cacgccgggc tcgtcaacca gtacctcgac ggtccggcca
     2041 atgagttcat cccggcgatc ggcggtgatc cggtcctgga tctcggtcaa ctcgccaagc
     2101 cgctcggcca taaggccggg gtccaccacg gcgtccaagt ccgccgcgta ggtgccttcc
     2161 tcggcgctgt aggcgaagaa tccgcaccag tcgacctgag cctcgaccac gaagtcgagc
     2221 agtgcgtcgt gatcctcctc ggtctcgccg gggtagccga cgatgaagtt ggaccggaac
     2281 gccgcctcgg gttcacgtgc ccgtatcgcc tcgatgcgct ccaggaaccg tccgccgtca
     2341 ccccaccggc gcatgcggcg catgagcggc gacgacacgt gctgcaacga caggtcgaag
     2401 tacggcacac cggtgacgca cacggcgtcc accaggcgat cggtgagctc cgacggatac
     2461 aggtagagga gtcgcacccg gtcgacccgg gcggccaccg cctcgacgag agggacaatg
     2521 gccttgtcgc ccacgccctg gtcacgtccg aaagccgcca ggtcttgggc cacaaggatg
     2581 atctcgcggg catccagggc gtcaacctca gccagcacat cgtccatgga ccggctccgc
     2641 tgcggtccac ggaatgtggg gatggcgcag aatccgcagg cccgatcgca gccctcggcc
     2701 accttcacgt aggcccacgg ccgatccgac gccgggcggg gcaggttcaa caggtcgaac
     2761 aatggggcgg tctcgggctg gatgccgctg gacggcttag gtcccagcgt gacgggcacg
     2821 ccaaagccgg ccacccggtc aacctctggg agcgcctcgg ctagttcgtc gccgtaccgc
     2881 tcggccatgc agccagtaac cactagacgg gcaccgtcac gacgcttgtc tgccagggcc
     2941 agcaccgtgt cgatggactc tcggcgggcc tcgtcgacga aggcgcacgt gttgaccacg
     3001 atcaggtcgg cctcgcccgc accgttgacg gcctgcatcc cgtcagccgc cagggtgccg
     3061 gccaacttgt cggagtcgac ctggttcttg gggcagccca gcgtcaccag gtggtaggtg
     3121 ccggtcattg gatgcggacc atcaggtcgt ggactggatc gcgaagacga ccatcaatcc
     3181 caagtagccg gctaacaggg ctgcgccttc ggcccgctcg atccggcggc tgcgaatggg
     3241 gaggagaaac gccatgacg
//
LOCUS       DASCMR010000375         1692 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001836888, whole genome shotgun sequence.
ACCESSION   DASCMR010000375 DASCMR010000000
VERSION     DASCMR010000375.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1692)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1692)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1692
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001836888"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..599
                     /locus_tag="QGG16_08700"
     CDS             <1..599
                     /locus_tag="QGG16_08700"
                     /inference="COORDINATES: protein motif:HMM:NF021610.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2344 domain-containing protein"
                     /protein_id="HJP25393.1"
                     /translation="SFGLALSTGHESEAEFLDVEVVEDRFCDGEAWADGRGVALGAEL
                     VETLSAALPIGIDVVAVAPIEKGESLQQVVVACTWSMDVDDIDRADAEAWVADVLSRA
                     EIVVERERKGKPVIEDLRPHVHALDVTGITENGVRLSADLGTQPRALRPSELLTAVDP
                     PLVARTVCRMNQWTSQGPDREEPLTAPVIPAPPARLPA"
     gene            618..>1692
                     /locus_tag="QGG16_08705"
     CDS             618..>1692
                     /locus_tag="QGG16_08705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E/G"
                     /protein_id="HJP25394.1"
                     /translation="MSENEEGARTNGPRDTGSTDPGERGDESRSAATSRHDSGGGETR
                     PKIGDSRPAPDGPDGGRRPQIGDSRPAPDARPSGDGASGNKERNQGGDGDAGSGSGRG
                     RRRRRGGRGRGQGGERQNQQRGEQQGGGGRGRQRGGNRPVEAVTDDAPVELDEETLRS
                     RRGRERRGKPIGRYTMCVSVSGGITQIAVLEGRQLIEHYLSRPADDVTEIHGNVYLAK
                     VQNVLPGMEAAFVDIGTPKNAVIYRGDLQYDDKEFDSKGRPRIEQVLRARQTILAQVT
                     KNPIAHKGARLTQEVSLPGRFVVLVPNSTTYGISKRLPESERKRLRNILDRVKPKQHG
                     IIVRTAAENITKEEIERDVRRLLN"
BASE COUNT          326 a          519 c          598 g          249 t
ORIGIN      
        1 tgtcgttcgg gctggccctg tcgacaggcc acgagtccga agcggagttc ctggacgtgg
       61 aagtggtcga ggaccgtttc tgcgacggtg aggcctgggc agacggccgg ggcgtggccc
      121 tgggagctga gttggtcgag acgttgagcg ccgcactgcc tatcgggatc gacgtggtgg
      181 ccgtggcgcc catcgagaag ggcgaatcgc tgcaacaggt cgtcgtggcc tgcacgtggt
      241 cgatggatgt cgatgacatc gaccgggcgg atgctgaagc gtgggtggcc gacgtgctgt
      301 cccgcgccga gatcgtcgtc gaacgcgaac gcaaggggaa gccggtcatt gaggacctgc
      361 gaccccatgt tcacgctctc gacgtcaccg ggatcacgga gaacggggtt cggctgtcgg
      421 ccgacctcgg gacccagccc cgcgcactca ggccgtcaga gttgctgact gcggtggatc
      481 cgccgttggt ggcccggact gtgtgcagga tgaaccaatg gacgtcgcag ggacccgacc
      541 gcgaagagcc gttgacggcc ccggtcatcc ctgccccgcc ggcacgattg ccggcgtgat
      601 gagaagggaa tacagcaatg agcgagaacg aagaaggggc ccggaccaac gggcccagag
      661 acaccggatc aactgatcct ggtgagcggg gcgacgaaag ccgctccgcg gccacgtccc
      721 gtcacgattc tggtggcggg gaaacaagac cgaagatcgg cgacagccgc cccgcacctg
      781 acggtcccga cggtggacgc aggccccaga tcggtgacag ccgtccggcg cccgatgccc
      841 gcccgtctgg cgatggcgcc agtggcaaca aggagcgaaa ccagggcggt gacggtgatg
      901 cgggttctgg ctcgggacgt ggtcgacgtc gccgtcgtgg tggccgtggc cgcggccagg
      961 gcggagaacg ccagaaccag cagagaggcg agcagcaggg cggtggcggc cgtggccgcc
     1021 agcgtggcgg caaccgcccg gtagaagcgg tcaccgatga tgcgccggta gagctcgacg
     1081 aggaaaccct ccggagccgt cgtggtcgag agcgccgagg caagcccatt ggccgctaca
     1141 ccatgtgtgt gagcgtgagt ggtgggatca cccagatcgc cgtgttggag ggccgccaac
     1201 tcatcgagca ctacctgtcg cgtcctgccg acgatgtgac cgagatccac ggcaacgtgt
     1261 acctcgccaa ggtccagaac gtgctgcccg gtatggaggc ggcctttgtc gacattggaa
     1321 ccccgaagaa cgcggtgatc taccggggtg acctccagta cgacgacaag gagttcgaca
     1381 gcaagggtcg cccccgtatc gaacaggtgc tgagggcgcg tcagacgatc ctggctcagg
     1441 tcaccaagaa cccgatcgcc cacaagggag cccgcctaac ccaggaggtc tcccttcccg
     1501 ggcggttcgt ggtgttggtg cccaacagca ccacctacgg tatctccaag cgcctaccgg
     1561 agtccgagcg caagcgcctt cgcaacatct tggatcgggt gaagcccaag cagcacggaa
     1621 ttatcgttcg gacagcggcc gagaacatca ctaaagagga gatcgagcgc gacgtgcgtc
     1681 ggctcctcaa cc
//
LOCUS       DASCMR010000376         1525 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001837206, whole genome shotgun sequence.
ACCESSION   DASCMR010000376 DASCMR010000000
VERSION     DASCMR010000376.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1525)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1525)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1525
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001837206"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            194..943
                     /locus_tag="QGG16_08710"
     CDS             194..943
                     /locus_tag="QGG16_08710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HJP25395.1"
                     /translation="MSGHSKWATIKHKKGAADAKRGKLFAKLIKQVEVSARQGGGDPD
                     SNPTLRTMFQKARDASVPLDTIERAVKRGTGELEGVDYETITYEGYAPHGVALYVETL
                     TDNRNRTGSEVRSLLTKNGGSLAEPGSVAWQFDRKGVVLLAGSVDEDEIMVAALDAGA
                     EDLIDDDGTWRLTCEATDLPSVRDALEAAEVPFLNADVAMLATTSVALDSVDQARAVL
                     RVMDLLDDNDDVQDVHANFDISAEILEELDD"
     gene            1001..1507
                     /gene="ruvC"
                     /locus_tag="QGG16_08715"
     CDS             1001..1507
                     /gene="ruvC"
                     /locus_tag="QGG16_08715"
                     /inference="COORDINATES: protein motif:HMM:TIGR00228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HJP25396.1"
                     /translation="MFVLGVDPGLTRCGYGVVSRTGRRLEAVAAGVIRTDPGADTAVR
                     LAELHREVAALIDEYRPDEVAVERVLFQVNVRTAMQTGQASGVAMAAAATAGCPVTLY
                     SPNEVKDAVAGWGAADKDQMEQMVRGQLGLTTPLRPVDAADAVAVALCHLAMVPPSRR
                     VTVAGAGR"
BASE COUNT          266 a          488 c          526 g          245 t
ORIGIN      
        1 tgctggcctc cgtggacggt cgacccgtgt tatgcagcca gggttcggtc gtggtgacat
       61 ccttccatcc tgagatgtcc ggagacggac ggatccacgg gaagttcctg gacatggcgt
      121 tcgccgcctg accagccact ggtggacgaa ccgcctggtt gcaacaagta gacgagacga
      181 gacggagggc gacatgtcgg gccattccaa gtgggcgacc atcaagcaca agaagggcgc
      241 tgcggacgcc aagcgcggca agctcttcgc caagctcatc aagcaggtcg aggtgtcggc
      301 ccgccaaggc ggaggcgacc cggactccaa cccgacgctg cggaccatgt tccagaaggc
      361 tcgtgacgca tcggtgccgc tcgacaccat cgaacgggcc gtcaagcgcg gtaccggtga
      421 acttgaagga gtcgactacg agaccatcac ctacgagggg tacgcccccc acggtgtagc
      481 gctctacgtg gagaccctga ccgacaaccg gaaccggacc ggctcggagg ttcgttccct
      541 cctgaccaag aacggtggtt cgctggccga gcccggatcg gtggcctggc agttcgatcg
      601 caagggggtg gtcctgctgg ccggctcagt cgacgaggac gaaatcatgg tcgccgcgct
      661 ggatgccgga gccgaggacc tgatcgacga tgacgggacc tggcgcttga cgtgcgaggc
      721 caccgacctc ccatctgtcc gtgacgccct cgaggcagcc gaggtgccgt tcctgaacgc
      781 cgacgtggcg atgctggcca ccacgtcagt ggccctggat tccgtcgacc aggccagggc
      841 tgtgctccgg gtcatggacc ttctggatga caacgacgac gtccaggacg tgcacgccaa
      901 cttcgacatc tccgccgaga tcctcgagga actcgacgac tgatcggccg gcggaaggga
      961 tgcaccggtc gtcggggcgg ccaccgctag agtcgtacac atgttcgttc tgggggttga
     1021 cccgggtctg acccgttgtg gctacggcgt cgtgtcgcgc accgggcgtc gcctcgaagc
     1081 cgtggccgcc ggagtgatcc ggaccgaccc gggggccgac acggcagttc gtctggccga
     1141 gcttcatcgc gaggtggcgg cactgatcga cgagtaccga cccgacgagg tggccgtcga
     1201 gcgggtcctc ttccaagtca acgtccgtac cgccatgcag acgggacagg cctcgggagt
     1261 cgccatggct gccgcggcga ccgccggttg tccggtgacg ctctattcgc cgaacgaggt
     1321 gaaggacgca gtggccggct ggggcgccgc cgacaaagac cagatggaac agatggtccg
     1381 gggccaactc ggcttgacca caccgttgcg cccggtcgac gccgccgatg ccgtggccgt
     1441 ggccctctgc catctggcca tggtgccgcc cagtcgtcgg gtgacggtcg ccggtgctgg
     1501 tcgatgatcg ggtcgctgag aggtc
//
LOCUS       DASCMR010000377         2269 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001844489, whole genome shotgun sequence.
ACCESSION   DASCMR010000377 DASCMR010000000
VERSION     DASCMR010000377.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2269)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2269)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2269
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001844489"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..617)
                     /locus_tag="QGG16_08720"
     CDS             complement(<1..617)
                     /locus_tag="QGG16_08720"
                     /inference="COORDINATES: protein motif:HMM:NF016952.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016603 - glutaminyl-peptide
                     cyclotransferase activity [Evidence IEA];
                     GO_process: GO:0017186 - peptidyl-pyroglutamic acid
                     biosynthetic process, using glutaminyl-peptide
                     cyclotransferase [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminyl-peptide cyclotransferase"
                     /protein_id="HJP25397.1"
                     /translation="MNRHHPIRCAAWALLRVLLIPAMGMALVACGSPGPGEVAEPSSA
                     GDPIVDPVLRLVPRVVATHPHDPTAFTQGLELVDGRLLETTGRYGESGIREVDRATGR
                     VLRSTLLDATWFGEGLTSIGDDRAIQLTWKAGRAVVWDLATLSKVDVLTYGGQGWGLC
                     GLGETGPDGAAHSLVMSDGSDHLTFRNLDLARSGDIAVRLDGRPV"
     gene            704..1684
                     /locus_tag="QGG16_08725"
     CDS             704..1684
                     /locus_tag="QGG16_08725"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJP25398.1"
                     /translation="MGSIGGDRVSGDLGAGDPLAGRIERDGIGTSWLDWGGDGPAVVL
                     LHPNGFCAGVYDPLARRLAFRHRVVGIDLRGHGASDDVVESALLGNDAMALDVLAVAD
                     HLGLDRFALVGVSFGGGVGIEVAAVAPERVAALVLCEAIAIEAEAREQQHFGYRNGPD
                     GGDHPLAVGARRRRDVWDDREAVLVSYGSRPPMDQLAPEALAGYVRWGFRDRSDGCVE
                     LACRPETEAQIFGSTDRHGPVQAFDALRWVAADGRVPTAVMAGSHTDLDPEWFRAQAA
                     ALGVHLQLIDGGHFCLFEDTARAEQLVGAALAGMGHGRPVVAGREHEEMK"
     gene            1681..>2269
                     /locus_tag="QGG16_08730"
     CDS             1681..>2269
                     /locus_tag="QGG16_08730"
                     /inference="COORDINATES: protein motif:HMM:NF012955.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HJP25399.1"
                     /translation="MSGQRSMHPVDVANRVIDSGMAESPHNRVTHELSVIEDDVAVIE
                     SFSHCWVVDAGEGLVCWDASGVQSGPTVVAALRQWTDRPVQSLVYTHGHVDHVGGSGA
                     FVADAQGRGDPRPRFLAHEAVPARFERYRATNGWNLAINRRQFGGIRNPANLGIGGDG
                     PRFLTDDVAEPDETFRDHMSFTVGDRTFELRHARGE"
BASE COUNT          350 a          753 c          805 g          361 t
ORIGIN      
        1 tccaccggtc ggccgtcgag ccgcacagca atgtccccac tgcgggcgag gtcgaggttc
       61 cgaaacgtga ggtgatccga gccgtcggac atgaccagcg agtgggctgc tccatccggg
      121 ccggtctcgc cgaggccgca gagcccccag ccctgaccgc cataggtcag gacgtccacc
      181 ttgctgagag tcgccagatc ccagaccacg gcccgaccgg ccttccaggt caactggatg
      241 gcccgatcgt cgccgatcga cgtgaggccc tcgccgaacc acgtggcgtc gaggagcgta
      301 gaccgcagca cccgtccggt agcccggtcg acctcacgga tccccgattc cccatagcgg
      361 ccggtggtct ccaggagtcg accgtcgacc agttcgagcc cctgggtgaa agccgtcggg
      421 tcatgtgggt gggtggccac tacccgggga acaaggcgaa gaaccggatc gacgatcgga
      481 tcgccggccg atgacggctc ggctacttcc ccggggcccg gcgaaccgca ggcgaccagg
      541 gccatgccca tggccgggat caggagcacc cgcaacaggg cccatgcggc gcacctgatc
      601 gggtggtgtc ggttcacggc tccccatcct cgtctcgtcg gtccgaaggc ggtccggcca
      661 gactgcgatc catgaccgga cggtgtgatc gtaggacccg ctgatgggct ccatcggcgg
      721 ggatcgggtc tccggggatc tcggcgccgg cgacccgctg gccgggcgca tcgaacgcga
      781 cgggatcggc acctcgtggc tggactgggg tggggacggc ccagcggtcg ttctcctcca
      841 tcccaacggg ttctgtgccg gcgtgtacga cccgttggcc cgccggctgg cattccgaca
      901 ccgggtggtg gggatcgacc tccggggcca cggagccagc gacgacgtcg tcgagtcggc
      961 cctcctagga aacgacgcca tggcgctcga cgtgctggcc gtggccgacc acctgggcct
     1021 ggaccgattt gccctcgtcg gggtctcctt tggcggaggc gttggcatcg aggtggcggc
     1081 cgtggcaccc gagcgggtgg ccgctctcgt tctctgcgag gccatcgcca tcgaggcgga
     1141 ggcccgagaa cagcagcact tcggctatcg gaacggtcct gacggagggg accacccact
     1201 ggccgtgggg gcccgtcgtc ggcgtgacgt ctgggacgac cgggaagccg tgctggtctc
     1261 ctacggttct cgtcccccga tggaccaact ggctcctgag gcgctggccg ggtacgtgcg
     1321 ttggggcttc cgggaccgct ccgacggctg tgtcgagctg gcctgtcgcc cagagaccga
     1381 ggcccagatc ttcggttcga cggaccgcca cggccccgtg caggcattcg acgcgctgcg
     1441 atgggtggcc gccgacgggc gggtgcccac agccgtcatg gccggcagtc atacggacct
     1501 cgacccggaa tggttccggg cacaggccgc ggcgctgggt gtccacctgc aactgatcga
     1561 cggtgggcac ttctgccttt ttgaggacac cgcccgggcc gagcagctcg tgggtgccgc
     1621 cctcgctggt atgggacatg gacggccagt ggtggccgga cgcgagcatg aggagatgaa
     1681 atgagcgggc agcggagcat gcatcctgtt gacgtggcca accgggtcat cgactcgggg
     1741 atggcggagt cgccccacaa ccgggtgacc catgaactct cggtgatcga ggacgacgtg
     1801 gcggtcatcg aatcgttctc tcactgctgg gtggtggacg caggagaggg gctggtgtgc
     1861 tgggacgcca gcggcgtgca gtccgggccg acggtggtcg ccgcattacg acagtggacg
     1921 gatcgaccgg tgcagagcct cgtctacacc cacggacacg tcgaccacgt gggtggtagc
     1981 ggggccttcg tggccgacgc acagggccga ggcgaccccc gcccccgctt tctggcccat
     2041 gaagcggtgc cggcccgttt cgagcggtac cgggccacca acggctggaa cctggccatc
     2101 aaccgtcgcc agttcggggg aatcaggaac cctgccaatc tgggcatcgg tggtgatggt
     2161 ccgcgtttcc tgaccgacga tgtggccgaa cctgacgaga ccttccgtga ccacatgtcg
     2221 ttcaccgtcg gtgaccgcac cttcgagttg cgccatgccc gcggtgaaa
//
LOCUS       DASCMR010000378         5884 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001852692, whole genome shotgun sequence.
ACCESSION   DASCMR010000378 DASCMR010000000
VERSION     DASCMR010000378.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5884)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5884)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5884
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001852692"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..674
                     /locus_tag="QGG16_08735"
     CDS             <1..674
                     /locus_tag="QGG16_08735"
                     /inference="COORDINATES: protein motif:HMM:NF012363.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="carboxylesterase family protein"
                     /protein_id="HJP25400.1"
                     /translation="PFYPVWGHDLLPRDPRDLMADGAGATVPLLTGTNEDELALWGVT
                     SMSDDDLTEMVGGLTDDPDALLAPYRDRLDGSDGPAAPGWVACAIGSDRVFGVPAARH
                     AEYRHPHSAETWMYRFSWDSRAFDGLFGAAHALEIPFTFNTVTRPGVDTFLGPGETPT
                     ALAEAMHDAWIAFIRDGDPSTAALGDWPRYTPDDRLVMNLDDQCGLLTDPRPAERSVW
                     EHLIR"
     gene            701..1819
                     /locus_tag="QGG16_08740"
     CDS             701..1819
                     /locus_tag="QGG16_08740"
                     /inference="COORDINATES: protein motif:HMM:NF027681.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HJP25401.1"
                     /translation="MDASGRTMRVLVMGGTQFNGLALVHELARCGHDVTIVNRGQTEA
                     PLPGGIHRLYADRTDHDQMRQVLGNEALGGREFDVVLDMSAYHPDDVNLMMEIFEGRT
                     GQYVFASSTVVYAAADMLPIDEDHPVQRDHPQIEYGGNKLLCEDALMAAHTERGFPAT
                     VVYFSMVYGPRNIIPDREQRMYARLEAGRPVMVPGDGTTVSQVGHVDDQARALEAVMH
                     APATIGRRYNLTGKGFHTDLGYVATTAAHLGVDPDIRFIPATTMDALWDGDIEIAVDS
                     GARANIDIRTTDEARRRQQSVRHRFKFASVVPRLAPNIHRWNRNVVFGIDALRRDTGW
                     EPRHDLASMVAQTHDWHVETGGRDYDWTYEDELLKLLD"
     gene            complement(1859..2866)
                     /locus_tag="QGG16_08745"
     CDS             complement(1859..2866)
                     /locus_tag="QGG16_08745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012229307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015440 - ABC-type peptide transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide/dipeptide ABC transporter
                     ATP-binding protein"
                     /protein_id="HJP25402.1"
                     /translation="MAGRGTIQLRSGEDIILRVENLVQEFPVGRNRVVHAVSDVSFDL
                     RKGETLGIVGESGCGKSTTARAIVQLPPPTSGRVVLDPSSENEIDLTRLSGHDLRDVR
                     PRLQMIFQDPISSLNPRRRVKDIVSEGLEIWSNGDIGTEGRERVEEVLHAVGIDPVLA
                     ASHRPHQFSGGQCQRISIARALTVNPEILICDEPVSALDVSVQAKILNLLEDMKARYD
                     LSLVFISHDLSVVRNVSDRVVVMYLGKICEVGGADRLYDAPAHPYTRALLASAPEPAQ
                     SVGVADAVLGDDLPSPTDPPSGCRFRTRCPLAIDRCATEEPVMQEIGEDHFVACHLPS
                     T"
     gene            complement(2866..3972)
                     /locus_tag="QGG16_08750"
     CDS             complement(2866..3972)
                     /locus_tag="QGG16_08750"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJP25403.1"
                     /translation="MTGRQAPLLSVRDLKVVFPTPIGMVHAVDGVSFDLEAGQSMGIV
                     GESGSGKTVTAKTLMNLLPSYALVDGSVNFDGRDLRALAAERKTEKHLWGVEISMVFQ
                     DPMTSLNPVKKVGEQIAESVRYHLGQTRTAARRQAGDLLEQVGIPEPGRRLDEYPHQL
                     SGGLRQRVVIAAALACEPRILIADEPTTSLDVTVQKHILDLLDDLRTARGMAMILVTH
                     DLGVVKGRTDEVMVMYAGRTMEEASTGAVFSQQGHPYTEALIETIPKINSASHTRLVP
                     IPGQPPVTTSPPAGYPFADRCRYATDLCVAQGPPLTALGNGHHVACHTPVRTPAAETA
                     LAVNAARGHTATGLEIHQSGVPTGAVTDGLGEQI"
     gene            complement(3969..4853)
                     /locus_tag="QGG16_08755"
     CDS             complement(3969..4853)
                     /locus_tag="QGG16_08755"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP25404.1"
                     /translation="MKLTAEPPMDESSGAVKARRLGLGFWLPMGWIFLIVGVALLAPV
                     LPLKDPTDYFIRPGERPPYPPSADHWFGTDQDARDMFSRIISGARVSLAVGFMTVTMS
                     FIVGGTLGMVAGLVRGWFDRLASFLFLVVLSFPGIVLVILIIALIDRSVLTISVVLAI
                     GGIAPVGRLARAATLSFAEREFVIAARTLGARNSRILFRELLPNVVIPMGALVLLGVA
                     SAILAEGGLAFLGLSIEKGETWGKLIRNGSGSRVLRDSPWVAFGPITVMFLTLASINY
                     IGDYLRDFFNVRETGLGQ"
     gene            complement(4850..5779)
                     /locus_tag="QGG16_08760"
     CDS             complement(4850..5779)
                     /locus_tag="QGG16_08760"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP25405.1"
                     /translation="MLIALLLAVSMFTFGAMNLLGDPLFNILGPVAGDTENPENLAKI
                     QAAKEQFYLDRPLPERYVRWLGDFVTGDFGVRFSASGQPPVSEVIKERLPRTLALSGM
                     AMTFTLAIGIPWGLWSGSTSKKGLDRLSTGVAFFLVSIPNFALGVVLLYAVGFRLGWM
                     PVRFDAGDPFWQRMHQLVLPALTLALGGAAVYQRLLRTDMITTLQEDFILMARAKGLS
                     RRHILFRHALRPSLFSVVTLFGINAGAVFGGALIVELIFGIPGIGSLFVESIFREDFP
                     VVLALVMILTAGFVVMNFVVDVLYSIIDPRVRQ"
BASE COUNT         1119 a         1838 c         1877 g         1050 t
ORIGIN      
        1 agcccttcta tccggtgtgg ggccacgacc ttctcccccg cgacccccgg gacctgatgg
       61 ccgacggcgc cggggcgacg gtgcccctgc tgaccggcac caatgaagac gagttggccc
      121 tctggggcgt aaccagcatg tccgacgacg acttgaccga gatggtcggc ggcctgaccg
      181 acgatcccga tgccctgctg gccccctacc gcgaccgact ggacggatcg gacggaccgg
      241 cagctcccgg ctgggtggcg tgcgccatcg gctcggaccg ggtgttcggc gtaccggcgg
      301 cccgccatgc cgaataccgc catcctcaca gtgccgagac ctggatgtac cggttctcgt
      361 gggactctcg ggccttcgac gggctgttcg gggccgccca cgccctggag atcccgttca
      421 cgttcaacac cgtgacccga cccggcgtcg ataccttcct gggcccgggc gagactccta
      481 ccgctctggc cgaagccatg cacgacgctt ggattgcctt catccgcgac ggagacccgt
      541 cgaccgcggc actcggcgac tggcctcgct acacgcccga cgaccggctg gtcatgaacc
      601 tcgacgacca gtgcggtctg ctgaccgatc ctcgacccgc cgaacgctca gtctgggagc
      661 acctcatccg atgactcctg tacgcggtga cgagcccgcc atggacgcga gcggcaggac
      721 catgcgggta cttgtcatgg gcggcaccca gttcaacggg ctggccctcg tccacgaact
      781 cgcccgatgt ggccacgatg tcaccatcgt caaccgcggc cagaccgagg cgccgctacc
      841 cggcggcatc caccgcctct atgcagatcg caccgaccac gaccagatgc gccaggtcct
      901 gggcaacgag gcgctcggtg gtcgggagtt cgacgtggtg ctggacatga gcgcttacca
      961 ccccgatgac gtcaacctca tgatggagat cttcgaggga cgcaccgggc agtacgtgtt
     1021 cgccagttcc acggtggtct atgcggcggc cgacatgttg cccattgacg aggaccaccc
     1081 cgtccaacgc gaccaccccc agattgaata tggcggcaac aagctcttgt gcgaggacgc
     1141 cctgatggcc gcccacactg aacggggatt tccggcaacc gtcgtctact tctcgatggt
     1201 ctacggcccc cgcaacatca tcccggaccg cgagcagcgc atgtacgccc gcctggaggc
     1261 tggccgaccg gtcatggtgc ccggtgacgg gaccacggtg tcccaggtgg gccacgttga
     1321 cgaccaggcc cgggcactgg aggctgtcat gcacgcccca gccaccattg gtcggcgcta
     1381 caacctcacc gggaagggct tccacaccga cctgggctac gtggccacca ccgcggccca
     1441 cctcggcgtg gaccccgaca tccgcttcat cccggcgacc accatggatg ccctgtggga
     1501 cggcgacatc gagatcgccg tggacagtgg agcgagagcc aacatcgata tccgcaccac
     1561 cgatgaggcc cggagacgtc agcagtcggt gcgtcaccgg ttcaagttcg cctcggtggt
     1621 gccccggttg gcccccaaca tccatcgttg gaaccgcaac gtggtcttcg gcatcgacgc
     1681 gttgcgacgc gacaccggtt gggaacctcg ccacgacctg gcgtcgatgg tggcccagac
     1741 gcacgactgg cacgtcgaga caggtggccg agactatgac tggacctacg aggacgagct
     1801 cctcaagctc ctggactgag catctgtcct gtggcctgtc acgagggcta cagggcgctt
     1861 aggtggacgg gaggtggcag gccacaaagt ggtcttcgcc aatctcttgc atcaccggct
     1921 cctcggtggc acacctgtcg atcgccaatg ggcatcgggt ccggaatcga caaccggacg
     1981 gcgggtcggt gggcgacgga agatcgtcac ccaaaactgc atcggctaca cccaccgact
     2041 gggctggttc gggtgccgac gcgagcagcg ccctggtgta cgggtgggcc ggggcgtcgt
     2101 agaggcgatc agcaccgccc acctcgcata tcttccctag gtacatcacg acgactcgat
     2161 cgctcacgtt gcggaccacc gacaggtcgt ggctgatgaa cacaaggctc aggtcgtagc
     2221 gggccttcat gtcctccagg aggttcagga tctttgcctg gactgagacg tcgagagctg
     2281 agactggttc gtcacagatc aggatctccg ggttcacggt cagcgcccgg gcgatggaga
     2341 tccgctggca ctgcccgccg gagaactggt gtggccggtg ggatgccgcc aaaaccgggt
     2401 cgatgcctac agcgtgaagg acttcctcga ctcgttccct tccttcggtt ccgatgtctc
     2461 cgttggacca aatttcgaga ccctcactga cgatgtcttt cacccgcctc cgcgggttca
     2521 gcgacgagat tgggtcctgg aagatcatct ggagtctcgg ccgtacatcg cgcaggtcgt
     2581 ggcctgacag acgggtcagg tcgatctcat tttcggagct ggggtccagg accacccgac
     2641 cgctggtggg tggcggaagc tgaactatgg cccgagctgt cgtggacttg ccgcagccgg
     2701 attcgccaac gatgcccagg gtctccccct tccggaggtc gaaagagacg tccgacacgg
     2761 cgtggaccac acggttgcga ccgaccggga actcctggac gaggttctcc acccggagga
     2821 tgatgtcctc gccgcttcgg agttggatgg tgccacggcc cgccatcaga tttgttcccc
     2881 tagaccgtcg gtgactgccc cggtcggcac tccggactgg tggatctcca acccggtcgc
     2941 cgtgtggccc cgcgctgcgt tgactgctag agccgtctcg gcggctgggg tcctgaccgg
     3001 tgtgtgacac gcaacgtggt ggccgttgcc aagggccgtc aggggtgggc cctgcgccac
     3061 gcaaaggtcg gtcgcgtagc ggcaccgatc ggcaaacggg tatccggcgg gtggactggt
     3121 agtaaccggt ggttggccag ggatcggcac cagtcgtgta tggctggctg agttgatctt
     3181 cggaatggtt tcaatcagag cctcggtgta ggggtggccc tgctgggaga agaccgctcc
     3241 ggtggaggcc tcttccatgg ttcgaccggc gtacatgacc atcacttcgt cagtccggcc
     3301 tttgacgacg ccgaggtcgt gggtgacgag gatcatcgcc atcccccgtg cggtacgaag
     3361 atcgtcgagc aggtccaaga tgtgcttctg gacggtgacg tccaacgacg tggtgggttc
     3421 atcggcaatg agtatccgtg gttcgcacgc cagggccgct gcgattacta cccgttggcg
     3481 gaggcctcct gatagttggt gggggtattc gtcgagcctt cttcccggtt cgggaatccc
     3541 tacttgttcg agtaggtcgc ctgcttgacg gcgagctgcc gttctcgtct gtccgaggtg
     3601 atagcgcact gattcggcga tctgttcgcc gaccttcttg accggattga gtgacgtcat
     3661 cgggtcctgg aagaccatgg agatctcaac gccccagagg tgcttctcgg tcttccgttc
     3721 ggcggccagg gcgcgtaggt ctcgaccatc gaagttcacc gaaccgtcga ccagggcata
     3781 ggagggaaga aggttcatca gggtcttggc tgtcactgtt tttcctgaac cggattcccc
     3841 gacgattccc atggactggc cggcttcgag gtcgaaagac accccgtcga cggcatgcac
     3901 catcccgatc ggggtcggga ataccacctt taggtcccgg acactcagca atggtgcttg
     3961 tcgaccggtc attgtccgag gcctgtttct cggacgttga agaaatcgcg gaggtagtcg
     4021 ccgatgtagt tgatcgacgc gagggtgagg aacatcacgg tgatgggacc gaacgcgacc
     4081 cacggagagt ctcgtaggac cctgcttccc gagccgttac gaatgagctt cccccacgtc
     4141 tctcccttct cgattgacag gccgaggaac gccaggccgc cctcggccaa gatcgctgag
     4201 gccactccta ggagcaccag ggctcccatg gggatgacga cgttggggag aagttctcga
     4261 aagaggatgc gggagtttcg tgccccaaga gtcctcgcgg cgatcacgaa ttccctttcg
     4321 gcaaagctca gtgtcgcggc acgggccagc cgtcccactg gcgcgatacc gccgatggcc
     4381 agtaccaccg agatggtcag gacacttcga tcgatcagcg cgattatgag aatcaccagc
     4441 acgatgcctg ggaaggacag cacgacgagg aagaggaacg aggcgagccg gtcaaaccag
     4501 ccccttacca ggccagcaac catccctaga gttcctccga cgatgaaact catcgtgacg
     4561 gtcatgaagc caacggccag ggagacgcgg gccccgctga tgatccgcga gaacatgtcg
     4621 cgggcatctt ggtctgttcc gaaccagtgg tcggccgacg gcggataggg cgggcgttct
     4681 ccaggtcgaa tgaaatagtc ggtggggtcc ttgaggggaa gaactggagc aagcagtgcc
     4741 acaccgacta tgaggaagat ccagcccatt gggagccaga agcccaaccc gagccgacgc
     4801 gccttgaccg ctccagagga ctcatccatc gggggttcgg ctgtgagctt cactgtcgga
     4861 ctctggggtc gatgatcgaa tagaggacgt cgacgacgaa gttcatgaca acgaatcctg
     4921 cggtcagaat catcaccagg gcgagtacca cggggaagtc ctcacggaag atcgattcga
     4981 cgaacaacga tccgatccct gggattccga aaatcagttc aacgatgagg gccccaccga
     5041 acacggcccc tgcgttgatc ccgaaaaggg tgaccaccga gaacaacgac ggtcgcaggg
     5101 catgccggaa aaggatgtgc ctccgagaca ggcccttggc ccgggccatc aagatgaagt
     5161 cctcctgaag ggtggtgatc atgtcggtcc gcaggagccg ctggtagaca gcggcgccgc
     5221 ccagggccag ggtcagtgcg ggaaggacca gttggtgcat gcgttgccaa aacgggtcac
     5281 cggcgtcgaa cctgacgggc atccagccga ggcggaaacc aaccgcgtag aggaggacca
     5341 caccaagggc gaagttgggt atcgatacga ggaagaacgc cacgccggtc gacagccgat
     5401 ctaggccctt ttttgatgtt gaacccgacc acaagcccca cgggataccg atggccagcg
     5461 tgaaggtcat ggccattcca gaaagggcca gtgttcgggg aaggcgttcc ttgattacct
     5521 cgcttaccgg tggttgtccg gaagctgaga accggactcc gaagtctcct gtgacgaagt
     5581 ctccgagcca ccggacgtaa cgttcgggaa gcgggcggtc gaggtaaaac tgctccttgg
     5641 ccgcttggat cttggcgagg ttttccggat tttcggtgtc accggcaacc gggccaagga
     5701 tgttgaagag cggatcgccc aggaggttca tcgctccgaa ggtgaacatg gacaccgcaa
     5761 gcaagagcgc gatgagcatg cccacccgga gaccccagaa tctcatctcg gtggcagagc
     5821 tctaatttga agtctgggga ccgcccctct gcaatccggg ttagccctcc gacagccaga
     5881 gggt
//
LOCUS       DASCMR010000379         1569 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001853146, whole genome shotgun sequence.
ACCESSION   DASCMR010000379 DASCMR010000000
VERSION     DASCMR010000379.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1569)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1569)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1569
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001853146"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            82..909
                     /locus_tag="QGG16_08765"
     CDS             82..909
                     /locus_tag="QGG16_08765"
                     /inference="COORDINATES: protein motif:HMM:NF018447.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase family protein"
                     /protein_id="HJP25406.1"
                     /translation="MSGGEGDGALDVEPTVERWRVVVVALATIAALPLFVLENPSSPG
                     ALTGTADAATRPVSDAPRIETIELVVATPDRSSSGAWPTPAVSELSSRARDWHLARST
                     REVQDQMAVVAHEHEAEALAAARLMAAEEFAERAELDALLASRQLEADRQAERARLRA
                     EELKRREEAMVTPGPTTTIPWDTEPHPHGPSDIQWEALRFCEATGNYTAVNPTGKYRG
                     AYQFSRQTWDWIAGLNFEHLVGVDPAAATPADQDRMAQALYDLRGRGQWPVCGRYLP"
     gene            953..>1569
                     /gene="rsmA"
                     /locus_tag="QGG16_08770"
     CDS             953..>1569
                     /gene="rsmA"
                     /locus_tag="QGG16_08770"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: protein motif:HMM:TIGR00755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HJP25407.1"
                     /translation="MTLTRTQVRDLLERHGIHPKRSLGQNFVVEPNTVRRIAELAGVG
                     PGDRVVEIGPGVGSLTLALADTGASVTAVEIDDALVGVLAEVMAGPGARRDVRIVHAD
                     AMEVDWDSVLYTGPGGGDPGDGNWTLVANLPYNVSVPLVCDLLDGVPAIGKMVVMVQK
                     EVADRLVAGPGDDAYGLPSVKVAYHAVGRLVGRVPPSVFLPRPNV"
BASE COUNT          234 a          530 c          552 g          253 t
ORIGIN      
        1 cggctggtcg atccgtcccc gatcttgcgt tgaccggctg tcgtccctct cgtcgcgccg
       61 gcgatccggc catggccggt cgtgtccgga ggggaagggg acggagctct ggacgttgaa
      121 cccaccgtcg aacggtggcg tgtggtcgtc gtggccctgg ccacgatcgc tgcgttgccg
      181 ctgttcgtac tcgagaaccc atcgtcgccc ggtgcactca ccgggacggc tgacgcggcc
      241 acccgccccg tcagcgacgc gccccggatc gagacgatcg aactcgtcgt cgccacgccg
      301 gaccgttcct cgtcgggggc atggcccacc cccgcggttt cggagctgag ttcgcgggcc
      361 cgggactggc atctggcccg gtccactcgg gaggttcagg accagatggc ggtcgtggcc
      421 cacgaacacg aggccgaggc gctggccgcc gcccgcctga tggccgccga ggagttcgct
      481 gagagggccg agctggacgc cctgctggcc agccgacagt tggaggccga tcgtcaggcc
      541 gaacgggccc gcctccgggc cgaggagctc aagcgtcgcg aggaggccat ggtcaccccg
      601 ggcccgacga ccaccatccc gtgggacacc gaaccccatc cgcatggccc gtcggacatt
      661 cagtgggagg cactgcggtt ctgcgaagcc actggcaact acacggcggt gaacccgacc
      721 ggcaagtacc gaggcgccta ccagttcagc cgacagacct gggattggat agccggactg
      781 aacttcgagc atctcgtcgg cgtggacccg gctgccgcaa cgcctgccga tcaggaccgc
      841 atggcccagg ccctctacga cctgcgaggt cggggccagt ggccggtgtg cggccgctac
      901 ctgccctgag cgaccttcgg gtccggcccg ctaccgcgtc gaccgccaga tcgtgaccct
      961 cacccggacg caggtccgag acctgctgga gcgtcatggc atccacccaa agcggtcgct
     1021 tgggcagaac ttcgtggtcg aacccaacac ggtgcgacgt atcgctgaac tggctggcgt
     1081 cgggcccgga gaccgggtgg tcgagatcgg gccgggcgtg ggttcgttga cccttgccct
     1141 ggccgacacc ggagcctcgg tcaccgccgt ggagatcgac gacgcactgg ttggcgtgtt
     1201 ggccgaggtg atggccggac cgggggcccg tcgagacgtc cggatcgtcc acgccgacgc
     1261 catggaggtc gactgggatt cggtgctcta caccggcccg ggtggaggcg atccaggaga
     1321 tgggaactgg acgttggttg ccaacctccc gtacaacgtg tctgttccgc ttgtctgcga
     1381 tttgctggac ggtgtgccgg ccatcggcaa gatggtggtg atggtccaga aggaggtggc
     1441 cgaccgtctg gtggctggtc caggtgacga cgcctacgga ctgcccagtg tgaaggtggc
     1501 gtaccacgcc gtcggacggc tggtcggccg agtgccgccc tctgtcttcc tgccccgccc
     1561 gaacgtcga
//
LOCUS       DASCMR010000380         5657 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001854024, whole genome shotgun sequence.
ACCESSION   DASCMR010000380 DASCMR010000000
VERSION     DASCMR010000380.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5657)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5657)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5657
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001854024"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1367
                     /locus_tag="QGG16_08775"
     CDS             <1..1367
                     /locus_tag="QGG16_08775"
                     /inference="COORDINATES: protein motif:HMM:NF024850.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJP25408.1"
                     /translation="QLAMYVDIDGMEPEDAAALWLADNCARWTGWASADQGVCPEAPV
                     AAETLYDYGVTDDTIRIGAIADLSGIFAPLVIQIIDAQTSYWDMVNDHGGIDGKQVEF
                     VVLDNGYDVPTHLERYEAMKDKDSGVVFLSQSTGSPHTAAIAEALVEDGLGAIPLSWY
                     SGWPDPAFGQNVFESYTNYCYESMNAVDWLSNNVVEGDTKLAVISYPGEYGQDGATGA
                     KMAAEALGIEVVYDGEGAAIPGADQTPVIAGLIESGANLVWATVGPGVFAEIFGGAAA
                     QGFMPIWSGNSPTYNYVLLATPLAPALDAVYYQSSYVPTWNTGGTSGMETMVAELQAR
                     IPDKPLSDVYAVGWTEAMATHQILETAANNKDMTRAGVIVAANETVVDYQGLAPNQGY
                     GGEVNDFIVRESYIFDIQADLFDAEATVAGGGSTGSVMLGGGPIMSDQARDHVYEGAC
                     FSAG"
     gene            1474..2268
                     /locus_tag="QGG16_08780"
     CDS             1474..2268
                     /locus_tag="QGG16_08780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJP25409.1"
                     /translation="MLEVANLEVVYNEVILVLRGLSIEVRDGQIVALLGANGAGKTTA
                     TRAITGLLDVHEGKVTKGTVTLDGDRIDGLEPAQIVRLGISQVMEGRRVFAELTVDEN
                     LVTGGITSNDRKAIAESHERVMTMFPILAERRNSTAGYLSGGEQQMLAIGRALMSNPQ
                     LLILDEPSLGLAPKLVAQIRDHIVEINQSGTSVLLIEQNANMALSIADYGYIMETGKV
                     VMDGEAAKLLKDEDVKEFYLGLHGDEGERKSFRDVKHYKRRKRWLS"
     gene            2265..3071
                     /locus_tag="QGG16_08785"
     CDS             2265..3071
                     /locus_tag="QGG16_08785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJP25410.1"
                     /translation="MTESRLADPLLEVDGISLSFKGVKAITDVSFQVGTGELFAIIGP
                     NGAGKTSIFNSISQVYHPQTGDIRWKGESIMGSRPDRVAERGIARTFQNIELFPHMTV
                     LENLLLGRHIRMERSWLAGALWFGPAKREEIDNRRAVEDIIDFLEIEQWRKHPVALLP
                     YGFQKRVELGRALAMEPELLLLDEPVAGMNLEETEDMARFILDIREELGITIVLVEHD
                     MGLVMDIADRVLVLDFGQRIAEGSPADVQRDPAVIAAYLGDEAGLAAAGS"
     gene            3095..3616
                     /locus_tag="QGG16_08790"
     CDS             3095..3616
                     /locus_tag="QGG16_08790"
                     /inference="COORDINATES: protein motif:HMM:NF013231.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HJP25411.1"
                     /translation="MTDELRADPLLERATEKVADALPDVDLDLFRLSFVLTRAANRFS
                     RHVESTVHRPRGLTTAGFRILFTLWSSGPLPAHRIALLAGLSRASVSSVVNTLERDGR
                     VERTRGDDDRRVVTVSLTPSGETAVRETYEGQYALEQTQYEGLSPTERAALAEALATL
                     IATPLGGGVGELA"
     gene            complement(3613..>5657)
                     /locus_tag="QGG16_08795"
     CDS             complement(3613..>5657)
                     /locus_tag="QGG16_08795"
                     /inference="COORDINATES: protein motif:HMM:NF013720.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJP25412.1"
                     /translation="NPDGIVGGVWLPGDGQASPVDTTMAMANVAKERGARIFEGVSVE
                     HIRTTDGQAVGVDTDQGPIDAEHVVTAAGMWSHQLGRDVGVNIPLHACEHFYLVTEPI
                     PDLPSGLPVLRDTDNCIYVKEEAGRLMVGAFEPVAKPFGMAGIPTDRPFMQLDEDWDH
                     LAPVYEAACERLPVLENMGIRLFFNGPESFTPDDRYLLGETPELRNHWVATGFNSIGM
                     QSAGGAGKVLAEWMVHGRPPMDLWDVDVRRMQPFQTNRRYLHDRSVEALGLLYAMHWP
                     FRQVETARGVRHSPFHDRLADLGACHGEGGGWERPNWYAPEGVEPTYEYTFGRQNWFE
                     YSADEHRACREGAALFDQTSLAKLLVQGPDACAVLNRISSADVDVEPGTSVYTTWLND
                     RGGIEADLTVNRLDDHRFLVVTAFSTQIKDADWISRHTPDDARMTVTDVTSAWAVLGV
                     FGPEARNIVAPLTDADLSNKAFPFGTLQEIDLGYARSIAVRRTYMGELGWELYVPTEF
                     ALGAFDALWESGEPRGLTPAGYHAMNSLRMEKAYRHWGDDIAEEDTPLHAGLSWGVAF
                     DKPGGFIGLDALMAQRETGVDRRLVQFRLDDPAPLLYHDEPVYRDGVLVSRITSGMYG
                     HTIGGALGMGYVGCEPDTPRAQVIEGTFEVDVNGTRVPATASFRPFYDPDSSRVRL"
BASE COUNT         1036 a         1648 c         1892 g         1081 t
ORIGIN      
        1 cccagttggc catgtacgtc gacatcgacg gcatggagcc tgaggatgcg gctgccttgt
       61 ggttggccga caactgtgcc cgttggactg gatgggcttc agccgatcag ggtgtctgcc
      121 ccgaggcccc ggtcgctgct gaaacgctct acgactatgg ggtcacagat gacaccatcc
      181 ggatcggcgc tattgctgac ctcagtggaa tttttgcccc actggtcatc cagatcattg
      241 atgcccagac ttcctactgg gacatggtca acgatcacgg tggtattgac ggcaagcagg
      301 tcgagttcgt cgtactggat aacggctacg acgtgccgac ccaccttgaa cgctacgaag
      361 cgatgaagga caaggactct ggcgtggtgt tcctcagcca gtcgaccggc tcgccccaca
      421 cggcggcgat cgccgaggcg ttggttgaag acggcctggg agctattccg ttgtcgtggt
      481 attcgggttg gcctgatccg gcgtttggcc agaacgtttt cgagtcatac accaactact
      541 gctatgagtc gatgaacgct gtggactggt tgtcaaataa tgtcgttgag ggtgacacca
      601 agctcgccgt catctcctac ccgggtgagt acgggcagga tggcgcgacc ggtgccaaga
      661 tggctgctga ggcccttggt attgaagtcg tctatgacgg agaaggagcg gccatccctg
      721 gtgccgatca gacgcctgtc attgcaggcc tgattgagtc gggggcaaat ctggtatggg
      781 caactgtggg gccaggggtg ttcgccgaga tcttcggcgg tgccgctgct caggggttca
      841 tgccgatctg gtcgggtaac tcgcctacct acaactacgt gcttctggcc acgccgttgg
      901 caccggcgct cgacgcggtc tactaccagt cgagctatgt gccgacgtgg aacaccggtg
      961 gtacatcagg catggagacg atggtggcag agcttcaggc acgaatcccg gacaagcctc
     1021 tttcggatgt ctacgcagtg ggttggactg aagccatggc tacgcaccag atccttgaga
     1081 ccgcagctaa caacaaggac atgacccgag ccggcgtgat tgtggcggcc aatgagacgg
     1141 tcgtggacta tcagggcctt gctcccaacc agggttacgg cggcgaggtg aatgacttca
     1201 tcgtgaggga gtcgtacatc tttgacatcc aggccgacct atttgatgct gaagccactg
     1261 ttgccggtgg cggaagcaca ggttcggtaa tgctgggtgg cggtccgatc atgtcggacc
     1321 aggcccgcga tcacgtctat gagggcgcct gcttctcagc tggctgatcc cctgtagagg
     1381 aaccgaatac tgatggaacg agggggtggc cgacacaccg gccaccccct cagtccacag
     1441 tggcaatcga aagatcacca ctagaggctc ttgatgcttg aagtcgcgaa tttggaggtc
     1501 gtatacaacg aggtgatcct cgtccttcgc ggcctgtcaa ttgaagtgcg agatgggcag
     1561 attgtcgctc tcctgggagc caacggtgcc ggaaagacca cggctaccag agccatcacc
     1621 ggattgttag acgttcatga gggcaaggtc accaaaggaa ccgtcactct tgatggtgat
     1681 cgcatcgacg gtctagaacc ggcacaaatt gtgcgattgg ggatctcgca ggtgatggaa
     1741 ggtcgccgtg tgttcgccga attgacggtt gacgaaaatc tcgtgaccgg gggcattacc
     1801 agtaacgacc gcaaggcaat tgccgagtca cacgaacggg tgatgacaat gttccccatt
     1861 ctggccgagc gccgtaattc gacggcgggg tatctatcgg gtggtgaaca gcagatgctg
     1921 gccattggtc gagccctaat gtccaacccg cagttgctga tcctcgacga accatcccta
     1981 ggccttgctc ccaagttggt ggcacaaatc cgtgaccaca tcgtcgagat caaccagtct
     2041 gggaccagcg tccttcttat cgaacagaac gccaacatgg ccctgtcgat cgcggactat
     2101 ggctacatca tggagaccgg aaaggttgtc atggatggcg aggcggccaa gctcctaaag
     2161 gacgaggacg taaaagagtt ttatctgggc ctgcacggag acgagggtga acgcaagtcg
     2221 ttccgcgatg tgaagcacta caagcggcgt aagcggtggc tgtcgtgacc gaatcccggc
     2281 tggccgaccc gcttctggag gttgacggca tcagcctgtc gttcaagggc gtcaaggcca
     2341 ttaccgacgt gtccttccag gtaggcacgg gagagctgtt cgccataatc ggtcccaatg
     2401 gggccggcaa gacctcgatc ttcaacagca ttagccaggt gtaccaccct cagacgggcg
     2461 acatccggtg gaagggcgag tcgattatgg gtagccgccc ggaccgggtg gccgaacggg
     2521 gcatcgcccg tacgttccag aacatcgagc tcttcccgca catgacggtg ttggagaacc
     2581 tcctactggg ccgtcacatt cgtatggagc ggtcgtggtt ggccggagcc ctgtggttcg
     2641 ggccggctaa gcgcgaagag attgataacc ggcgggccgt agaggacatc atcgattttc
     2701 tagagatcga gcagtggcgt aagcacccgg tggcgctgct gccgtacggc ttccagaagc
     2761 gcgtggaact gggtcgggca ctggctatgg agcccgagtt gctcctcctg gacgagcctg
     2821 tggccggaat gaatctggag gagaccgagg acatggcccg gttcatcctc gacatccggg
     2881 aggagctcgg tatcacgatc gtcctggtgg agcacgacat gggcctggtc atggacatag
     2941 ccgaccgggt actggtgctg gacttcggac aacggattgc tgagggctcg ccggctgatg
     3001 tgcagcgaga ccctgcggtg atcgccgcct atctaggcga cgaagcaggc ctggctgcag
     3061 ccggctcctg accagggcca gcggagactc aacggtgact gacgagctcc gcgctgatcc
     3121 gcttctggag cgggccaccg agaaggtggc cgatgcgctg cccgatgtcg acctcgacct
     3181 cttccgcctc tcgttcgtcc tcactcgggc cgctaaccgg ttcagtcgcc acgtcgagtc
     3241 caccgtgcac cgtccccggg gcttgaccac tgccggcttc cggatcctgt tcaccctctg
     3301 gtccagcgga ccccttcccg ctcaccggat cgccctgttg gccggcttgt cgagggcgtc
     3361 ggtatccagc gtggtgaaca ccttggagcg agacggccgg gtggagcgga cgcgcggaga
     3421 tgacgatcgg cgggtggtga ccgtgtcact gacgccgtcc ggtgagactg ctgtgcgtga
     3481 gacttacgaa ggccagtacg cgcttgagca gactcagtac gaaggcctgt ccccgaccga
     3541 acgcgctgcg ctggccgagg cgttggcgac gctgatcgcc accccgttgg gtgggggcgt
     3601 tggggagttg gcctagaggc gcacccggct gctgtctggg tcgtagaacg ggcggaatga
     3661 ggcggttgcc ggaactcggg tgccgttcac gtcgacttcg aaggtgcctt cgattacctg
     3721 ggcgcggggg gtgtcgggct cacatcccac gtagcccatg cccagggcgc cgccgatcgt
     3781 gtggccgtac atgcccgagg taatcctcga gaccaggacg ccgtcgcggt acacgggttc
     3841 gtcgtggtag agcagcggcg ctggatcgtc gaggcggaac tgcacgaggc gtcgatccac
     3901 cccggtttcg cgctgggcca tcaaggcatc gaggccgatg aagccacccg gcttgtcgaa
     3961 tgcgacgccc cacgacaggc cggcgtggag gggggtgtcc tcctcggcaa tgtcgtcgcc
     4021 ccagtggcgg taggccttct ccatgcgcag tgagttcatg gcgtggtagc cggccggcgt
     4081 gagaccccgt ggttcaccgg attcccagag tgcgtcgaag gccccgaggg cgaactcggt
     4141 gggtacgtac agctcccaac ccagctcccc catgtaggtg cggcgcacgg cgatggaacg
     4201 ggcgtagccg aggtcgattt cctggagggt gccgaacggg aaggctttgt tggacaggtc
     4261 ggcgtcggtc agtggcgcca cgatgttgcg ggcctcgggt ccgaagacgc ccaggacggc
     4321 ccaggcggag gtcacgtcgg tgaccgtcat gcgggcgtcg tcgggggtat ggcgcgagat
     4381 ccagtcagcg tctttgatct gggtagagaa ggcggtcacc accaggaagc ggtggtcgtc
     4441 gaggcggttg acggtcaggt cggcttcgat gccgccccgg tcgttcagcc atgtggtgta
     4501 caccgacgtg cctggttcga cgtccacgtc ggccgacgag atccggttca gcacggcgca
     4561 ggcgtccggt ccctggacga gcagcttggc cagcgaggtc tggtcgaaca gcgccgcgcc
     4621 ctctcggcac gcccgatgct cgtcggccga gtactcgaac cagttctggc gaccgaatgt
     4681 gtactcgtag gtcggctcca cgccctcggg ggcgtaccag ttgggtcgtt cccagccgcc
     4741 gccttcgcca tggcaggcac cgaggtcggc cagacggtcg tggaacggcg agtggcgtac
     4801 accgcgggcc gtctcgacct ggcggaatgg ccagtgcatg gcgtacagca ggccgagggc
     4861 ctccacagaa cgatcgtgga gatagcgccg gttggtctgg aagggttgca tgcgtcggac
     4921 gtcgacgtcc cacaggtcca ttggtggccg accgtggacc atccactcgg ccagtacctt
     4981 tccggcaccc ccggctgact gcatccctat cgagttgaac ccggtggcca cccagtggtt
     5041 gcgaagttca ggggtctcgc cgagcaggta gcggtcgtcg ggggtaaacg actctgggcc
     5101 attgaagaac agtcggatgc ccatgttctc gagtacggga aggcgttcac aggccgcctc
     5161 atagaccggg gcgaggtggt cccagtcctc gtctagctgc atgaacggac ggtcagtggg
     5221 aatgccggcc atgccgaacg gcttagccac tggttcgaag gccccgacca tgagccgacc
     5281 ggcctcttcc ttgacgtaga tgcagttgtc ggtgtcgcgc agcaccggca ggccagaggg
     5341 cagatcgggg atcggttcgg tcaccagata gaagtgctca caggcatgca gcggaatgtt
     5401 gactcccacg tcacggccca attggtggga ccacatgccg gccgcggtga ccacgtgctc
     5461 ggcgtcgatg ggtccctggt cggtgtcgac gccgaccgcc tggccatcgg tggtgcggat
     5521 gtgttcgacg gatacgccct cgaagatccg ggcgcccctc tccttggcca cgttggccat
     5581 ggccatggtg gtgtccactg gcgaggcctg accgtcgccg ggtagccaga cacctcccac
     5641 gatgccgtcg gggttca
//
LOCUS       DASCMR010000381         2922 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001855362, whole genome shotgun sequence.
ACCESSION   DASCMR010000381 DASCMR010000000
VERSION     DASCMR010000381.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2922)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2922)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2922
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001855362"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(1..456)
                     /gene="purE"
                     /locus_tag="QGG16_08800"
     CDS             complement(1..456)
                     /gene="purE"
                     /locus_tag="QGG16_08800"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HJP25413.1"
                     /translation="MGYRVAVLMGSPNDGDKMGPAAVTLERYGIDADVRVMSAHRSPT
                     LVSEFVSGAREAGYQAIICGAGMAAHLAGAVAAQTTLPVIGVPLSGGAINGWDSLLAT
                     VQMPKGIPVATVAVDGAMNAALLVVQMLGISDPGLVAELEAHRAEMVPK"
     gene            complement(524..1750)
                     /gene="purD"
                     /locus_tag="QGG16_08805"
     CDS             complement(524..1750)
                     /gene="purD"
                     /locus_tag="QGG16_08805"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HJP25414.1"
                     /translation="MRVCVVGSGGREHALAHVLGHHHDVVVAPGNPGIPGSVDMPPSE
                     IDADLFVIGPEAPLVAGLADRLRGAGQLVFGPGADGARLEGSKAWMKEVLVEAGVSTA
                     AHGTFSDEAAALAFLDTMDDLFVVKTDGLAAGKGVVVTTDHAEAVDAVRSYLSGDAFG
                     DAGRTLVIEEGLTGPELSVLAICDGHDAVALAPAQDFKRLGDGDAGPNTGGMGAYSPV
                     PLATSAAVNDLMDTAVRPTLAALRARGIDYRGVLYCGLMYTPTGPRVLEYNVRFGDPE
                     TQVVLPRLTSDLGVLLAAAAAGDLAGRADRPTFDDGAAVTVVCASENYPTAPRTGDQI
                     QGLADASAIDGVSVFAAGVGERDGCLVTTGGRVLTVTGQGPTVSEARRRAYEAVSMIS
                     WPGMQYRTDIAADPAG"
     gene            complement(1779..>2922)
                     /locus_tag="QGG16_08810"
     CDS             complement(1779..>2922)
                     /locus_tag="QGG16_08810"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015799338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HJP25415.1"
                     /translation="GESFALQIVPSGVLYPHVTPVIGNGVVVDPRVLIAEMDMLESRG
                     VSTANLRLSGNAHLILPYHQELDALHERHLGKNKLGTTKRGIGPAYADRSMRVGIRVQ
                     DLLDEKIFREKLRAALEHTNKVLTRVFNRLPVDADEVAEEYLGWCAPRLAPHICDAVG
                     LVHDELDGGGRVLMEGAQATFLDVDHGTYPFVTSSNPVAGGACTGAGIGPRDIDRVIG
                     IAKAYVTRVGAGPFPTELFDEVGDYLVDVGHEYGTNTGRRRRPGWLDAVMLRYAARVN
                     SLSELAITKLDVLDQLETIRVCVAYEADGERHDQLPYHQSVLHRAIPIYEDLPGWGVD
                     LSDITERSQLPREAENYLAFVEHQVGVPVDMVGIGPGRHQVLRFAV"
BASE COUNT          521 a         1000 c          929 g          472 t
ORIGIN      
        1 ctacttcggg accatctcgg cgcggtgcgc ctcgagttcg gccaccagtc ccggatcgga
       61 gattcccagc atctggacga ccaggagggc agcgttcatt gcgccgtcga ctgccacggt
      121 ggccaccggg attcccttcg gcatctggac ggtggccagc aacgaatccc atccgttgat
      181 ggcgccgccg gaaaggggca cgccgatcac cggaagcgtg gtctgggccg caaccgctcc
      241 ggctaggtga gctgccatgc cagctccgca gataatggcc tggtacccgg cctcgcgggc
      301 acccgacacg aactcggaga ccagcgtcgg gcttcggtgg gccgacatga cccgaacgtc
      361 ggcgtcgatc ccataccgct cgagggtcac cgcggcgggc cccatcttgt cgccgtcgtt
      421 cggcgaaccc atcagcaccg ccactcggta acccatcctt atgctcctgt tctccggacc
      481 cacatcaggt cccgttctag ttccggattg attctgaccg agatcagccg gccggatccg
      541 ccgcaatgtc ggtgcggtat tgcataccgg gccacgagat catcgacacc gcctcgtagg
      601 cacgtcggcg agcttcgctg actgtcggcc cctgaccggt aacggtcaac actcgtcctc
      661 cagtcgtgac caagcatccg tctcgctcac ccactccggc agcgaacacg ctcaccccgt
      721 cgatcgccga ggcgtcggcc agaccctgga tctggtcgcc ggtgcgcggt gcggtcggat
      781 agttctcgga cgcgcagacc acggtaaccg ccgctccgtc atcgaacgtc ggtcggtcgg
      841 cccgtccggc caggtcaccg gccgccgctg cggccagtag gacaccgagg tcgctggtga
      901 gtcggggtaa caccacctgg gtctccggat caccgaatcg cacgttgtac tcgagcaccc
      961 ggggtccggt cggggtgtac atcaacccgc agtacaggac gccccggtag tcgatccccc
     1021 gtgcccgcag ggcagccaag gtaggtcgca ccgcagtgtc catgagatcg ttgacggccg
     1081 cactggtggc caacgggacc ggcgaataag cacccatccc cccggtgttc gggccggcgt
     1141 cgccgtcacc tagtcgcttg aaatcctgag cgggagctag ggccacagcg tcatgtccgt
     1201 cgcagatagc cagcactgag agttcgggcc cagtcaggcc ctcctcaatg accaacgtac
     1261 ggccggcgtc gccgaaggca tccccggaga ggtatgaccg cacggcatct acagcctcgg
     1321 cgtgatcggt ggttaccacc acgcccttgc cggccgccaa gccgtcggtc ttaaccacga
     1381 agagatcgtc catggtgtcc aggaaagcca gggcggcggc ctcatcggag aacgtcccgt
     1441 gagccgcggt cgacacgcca gcctcgacca agacctcctt catccacgcc ttggagccct
     1501 ccagacgggc accgtcagcg cccggcccaa agaccagctg gccggcgccc cgcaggcggt
     1561 cggccagccc ggcgaccagt ggcgcctcgg ggccgatcac gaagaggtcg gcgtcgattt
     1621 cgctgggcgg catgtccacc gacccgggga tgcccgggtt gccgggagcc accaccacgt
     1681 cgtggtgatg gcctagtacg tgggccagcg cgtgttcccg ccctccggaa ccgaccacac
     1741 aaaccctcat gcgtccctcc accccgcggc cggccggctc agacggcgaa ccgcaggacc
     1801 tggtgacgac ccgggccgat acccaccatg tccaccggaa caccgacctg atgctcaacg
     1861 aaggccaggt agttctcggc ctcgcgtggc agttgcgacc gttcggtgat atcggagagg
     1921 tccactcccc aaccgggtag atcctcgtaa atcggtatgg cccgatgtag gaccgactgg
     1981 tggtacggca actggtcgtg gcgctcgccg tcggcctcgt aggccacgca gacccggatg
     2041 gtttcaagct ggtcgagcac atcgagcttg gtgatagcta gttcagagag cgaattgacc
     2101 cgggccgcgt accgaagcat cacggcatcc aaccatcccg gacggcgtcg ccgacccgta
     2161 ttggtgccgt actcgtggcc aacgtccacg aggtagtcgc cgacctcgtc gaacagttcg
     2221 gtggggaacg gtccggcacc cacgcgggtg acgtaggcct tagcaatccc gatgacccgg
     2281 tcgatgtcac gcgggccgat acccgcgccc gtgcacgctc caccggccac cggattcgac
     2341 gaggtcacaa atgggtaggt gccgtggtcg acgtccagga aggtggcctg agcgccctcc
     2401 ataaggacgc gaccgccacc gtctaattcg tcgtggacca ggccgacggc atcgcagatg
     2461 tggggagcca accggggggc gcaccagccc aagtactcct cggccacctc gtcggcatcg
     2521 acgggcaacc ggttgaagac ccgggtcagc accttgttgg tgtgctcgag ggcggctcgc
     2581 aacttctcgc ggaagatctt ctcatcgaga aggtcctgga cccggatgcc gacccgcatg
     2641 gacctgtcgg cgtacgccgg accgataccc cgcttggtgg tacccaactt gttcttgcct
     2701 aggtggcgct cgtggagagc atcgagttcc tggtggtacg ggaggatcaa gtgggcgttt
     2761 ccgctgaggc ggagattggc cgtcgacacg ccgcgggact cgagcatgtc catctcggca
     2821 atgaggacgc ggggatcaac caccacgcca ttgccgatga ccggggtgac gtggggatag
     2881 aggacaccac tgggaacgat ctggagggca aaggactcgc cg
//
LOCUS       DASCMR010000382         2211 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001861201, whole genome shotgun sequence.
ACCESSION   DASCMR010000382 DASCMR010000000
VERSION     DASCMR010000382.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2211)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2211)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2211
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001861201"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1389
                     /locus_tag="QGG16_08815"
     CDS             <1..1389
                     /locus_tag="QGG16_08815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015799284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HJP25416.1"
                     /translation="ALVAAANLADRYISDRHLPDKAIDLIDEAGSRMRIKRMDTPDDM
                     REIETDLAEVVQRKKAAVESQDFEEAGRLRDTEKELLTRKEAKEAELKSSGQDLFDEV
                     DEEAIAEVLSVWTGIPVYKLTEEETQKLLKMEDELHKRVIGQEDAIKAVSQAIRRTRA
                     GLKDPKRPSGSFIFLGPSGVGKTELAKTLAEFLFGDEQALISLDMSEYMEKHTVSRLV
                     GSPPGYVGYEEGGQLTEAVRRRPFSVVLFDEVEKAHPDVFNTLLQILEEGRLTDSQGR
                     SVDFRNTVLIMTSNLGTADLRKANLGFAKADEAVSYERMKAKVNDALKAHFRPEFLNR
                     IDDTIVFHELSLAEVTRIVDLMVVRLSTQLSGQGMGLELTEAVKHHLAEQGYDPSMGA
                     RPLRRALQRLVEDPLSERLLHKEFAAGDIVVVDVEDAPDDGDAKGTRQVVFRAGAGFE
                     PPTVEMAVEGAE"
     gene            1427..>2211
                     /locus_tag="QGG16_08820"
     CDS             1427..>2211
                     /locus_tag="QGG16_08820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25417.1"
                     /translation="MNTPIRLGRASAILGLLLVVLTSAACRVDATVTVDVAENGTGHV
                     DLLVELDSAAVEALGGLDERVRVGDLVEAGWVISGPETIGGSARISARKAFDHPDRLA
                     AVLAEVVGPTAISQVRLVRERAFAETTWRLDGRIDLSPGLDLLADADLAEVLDGLPFA
                     RSDGELADLAGCPDGSCDPTASFSLTLLAEMPTNPEQVPEQVTGLGVEEGMSSGSWTV
                     VLGDPAPTLFHATGVLTDSTPRTWRTVSIISGGLFLLVSVFQIL"
BASE COUNT          372 a          711 c          735 g          393 t
ORIGIN      
        1 gccctggtcg cagcggcgaa cctggccgac cggtacatct cggaccggca cctccccgac
       61 aaggccatcg acctcatcga tgaggccggt tcccgcatgc ggatcaagcg catggacacg
      121 cccgacgaca tgcgtgagat cgaaactgat ctggccgagg tggtgcagcg taagaaggcg
      181 gccgtcgagt ctcaggactt cgaagaggct ggtcgcctgc gcgacaccga aaaggaactt
      241 ctgacccgca aggaggcaaa ggaggccgaa ctcaagtcgt ccggtcagga cctgttcgac
      301 gaggttgacg aggaggccat agccgaggtc ctctcggtgt ggactggcat ccccgtctac
      361 aagctgaccg aggaggagac ccagaagctc ctaaagatgg aggacgaact ccacaagcgg
      421 gtcatcggcc aggaggacgc catcaaagcg gtcagccagg ccattcggcg cacccgggcc
      481 ggcctcaagg atccaaagcg cccgtcgggg tcgttcatct tcctgggccc gtcgggcgtg
      541 ggtaagaccg agctggccaa gacgttggcc gagttcctgt tcggtgacga gcaggccctc
      601 atctcacttg acatgtcgga gtacatggag aagcacacgg tgagccgtct cgtcggttcg
      661 ccccccggct acgtgggcta cgaagagggc ggccagctca ccgaggcggt gcgtcgccgc
      721 ccgttctccg tggtgctgtt cgacgaggtt gaaaaggccc acccggacgt cttcaacacg
      781 ctgctccaga ttctcgagga gggtcgcctg accgattcgc agggtcgcag cgtcgacttc
      841 cgcaacaccg tgctgatcat gacgtccaat ctcggtacgg ccgacttgcg aaaggccaac
      901 cttggcttcg ccaaggccga cgaggcggtc agctacgagc ggatgaaggc caaggtcaac
      961 gatgccctca aggcgcactt ccggccggag ttcctaaacc gcatcgacga cacgattgtc
     1021 ttccatgagc tctcgctggc cgaggtgacc cgcatcgtcg acctgatggt cgtgcggttg
     1081 tccacccagt tgtcgggcca gggcatgggc ctggagctca ccgaggcggt caagcaccac
     1141 ctggccgagc aaggctacga cccgtcgatg ggtgcccgtc cgttgcgtcg ggccctccag
     1201 cgtcttgtcg aggatccgtt gtccgagcgc ctgcttcaca aggagttcgc tgctggcgac
     1261 attgtcgtgg tcgacgttga ggacgcgccc gatgacggcg acgccaaagg caccaggcag
     1321 gtggtcttcc gggccggcgc cggattcgag ccaccgaccg tcgagatggc ggtcgagggc
     1381 gcggagtagc cgcacctccc tttcgctcgg tctgtctccc ggtccgatga acacccctat
     1441 tcggttagga cgcgcgtcgg ccatcctcgg cctgttgttg gtggtcctga ccagcgccgc
     1501 ctgccgggtc gatgccacgg tcaccgtgga cgtcgccgaa aacggcacgg gacacgtcga
     1561 cctcctcgtc gaactggact cggcggcagt tgaggccctc ggcggactcg atgagcgggt
     1621 ccgggtgggt gacctcgttg aggctggctg ggtgatcagc gggcccgaga ccattggagg
     1681 gtcggcccgg atcagcgccc gcaaggcctt cgatcatccg gatcggctgg ctgccgtgct
     1741 ggccgaggtg gtcggaccga ccgctatctc ccaggttcgg ctggtgcgtg agcgggcctt
     1801 tgccgagacc acgtggcgcc tcgatggtcg gattgacctc tcgccgggct tggacttgct
     1861 ggctgacgcc gacctcgccg aggtcctcga cgggttgccg ttcgcccgct ccgacggtga
     1921 gttagcggac ctggctggat gccccgacgg atcctgtgac ccgacggcat cgttttctct
     1981 caccctgctg gccgagatgc ccaccaatcc ggagcaggtc cccgagcaag tcaccgggct
     2041 tggtgtcgag gaggggatgt ctagcggatc gtggacggtg gtgctcggag acccggcgcc
     2101 caccctcttt cacgccaccg gggtgcttac cgactccacc ccacggacgt ggcgcacggt
     2161 gtcgatcatc tcgggcggcc tgttccttct ggtgtcggtc ttccagatcc t
//
LOCUS       DASCMR010000383         3902 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001862434, whole genome shotgun sequence.
ACCESSION   DASCMR010000383 DASCMR010000000
VERSION     DASCMR010000383.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3902)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3902)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3902
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001862434"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..779)
                     /locus_tag="QGG16_08825"
     CDS             complement(<1..779)
                     /locus_tag="QGG16_08825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJP25418.1"
                     /translation="MSRLILRNGHVFDGISAGSPEAGPLEADIVVEDDRIVDVGPGLD
                     GDEEIDCTGRLITPGLFDCHVHFMADGDFSAQTHLQSPFSLQFFQAAERMERTLAVGV
                     TSVREAGGADAGVREARDRGLIAGPRMQISLTMLSQTGGHGDSWEICGGFMPGMGDAH
                     PGRPHNIVDGPDEMRRKVRELVRADADVIKVATTGGVMSSRSRPQQAQFHPDELEVLV
                     TEASAAERFVMAHAQGTRGIRNAITAGIRSIEHGIYLDDET"
     gene            826..1710
                     /locus_tag="QGG16_08830"
     CDS             826..1710
                     /locus_tag="QGG16_08830"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF014698.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HJP25419.1"
                     /translation="MAATSGVRISRLTGVLGARLDGVTLSPDMDPDDVAVLRSALVDH
                     EVLVVPGQALSPGEQAGFSHLLGDYSPVPFVQPVPEHPEVIKVVKEANETEAFNFGGV
                     WHSDFSFLDAPPAFTVLHALDVPHVGGDTEWASMTAAHDQLPADMREQFEEVTCVHSA
                     SASYSPAQQELHSGLSGMDIRTSESAEETREHPLLCTHPETGKRSLFFNGTYVRALRG
                     PGVGDGTEAGSREESHLLKWLHEFTTHVRFTMRHRWSDGDVVLWDNRSTQHVALNDYA
                     GQRRELHRTTVAGSEPAT"
     gene            complement(1798..2667)
                     /locus_tag="QGG16_08835"
     CDS             complement(1798..2667)
                     /locus_tag="QGG16_08835"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HJP25420.1"
                     /translation="MPNCAFIGLGVMGYPMAGHLKAAGYATTVYNRTATKADDWVAEH
                     DGISAPTPREAVAGAEFVMVCVGNDDDLRSVVFGDDGALAGMASGATLVDHTTASAEV
                     AREIRAAADELGVGFIDAPVSGGQAGAQNGQLSVMCGGDADVFAGVEPVIDVYAKATV
                     LIGDTGSGQLTKMVNQVCIAGLIQGLSEALDFGRRSGLDEEKVLSAISAGASGSWQMD
                     NRARTMLDRHFDHGFALDWMRKDLGIVFDEAQRIGATLPVTAMVDQFYARLQREGHGR
                     WDTSALIELLRDD"
     gene            complement(2728..3729)
                     /locus_tag="QGG16_08840"
     CDS             complement(2728..3729)
                     /locus_tag="QGG16_08840"
                     /inference="COORDINATES: protein motif:HMM:NF012955.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HJP25421.1"
                     /translation="MAADGRLASGRTADIPYETGLHEVADGVFAYLQPDGGWGWSNAG
                     LLATADGSVLVDTLFDQVLTRKMLDAMAPITGSHPIGTVVNTHANGDHCYGNGLLPEA
                     EIVTTEAAAREMGAVPPSALVALLAADMGEVTNDYVQRAFGGFTFEGIEVPEPTRTFT
                     GMLDLEVGGRRVALQQVGPAHTAGDLLVHLPDAGVVFAGDILFVNGTPIVWDGPISNW
                     VAACDRILELDADVANGAAVIIPGHGPLTDAAGVQAVRDYLTWLEGACRETHAAGLTA
                     ADAVAELASSETFQPYREWGEWERLAVNVRAAYREIDGGDESIPNLFEAMANLAAGH"
BASE COUNT          660 a         1235 c         1337 g          670 t
ORIGIN      
        1 atggtctcgt catcgaggta gatcccgtgc tcgatggaac ggatccctgc ggtgatggca
       61 ttgcggatgc cccgggtgcc ctgggcgtgg gccatgacga accgttcggc cgctgacgcc
      121 tcggtgacga gcacctccaa ctcgtcgggg tggaactgag cctgctgcgg tcgagaccga
      181 gacgacatga cgccaccggt ggtggccacc ttgatgacgt cggcatcagc ccggactagt
      241 tcgcggacct ttcgacgcat ctcgtcgggg ccgtcgacga tgttgtgggg gcgcccaggg
      301 tgggcatcgc ccatccccgg catgaagccg ccgcagatct cccacgagtc gccgtggccg
      361 ccggtctgag agagcatggt gagcgagatc tgcatgcgtg ggccggcaat gaggccccga
      421 tcgcgggcct ctcggacgcc tgcgtcggcg ccgccggcct cacggacgct ggtcacgccc
      481 acggcgaggg tgcgttccat acgttcggcg gcctggaaga actgaagtga gaacggcgac
      541 tgaaggtgag tctgggcgga aaagtccccg tcggccatga agtgaacgtg gcagtcgaac
      601 aagccggggg tgatcaggcg accggtgcag tcgatctctt cgtcgccgtc gagtccgggg
      661 ccgacgtcga cgatgcggtc gtcctcaacc acgatgtctg cttcgagtgg gcctgcttcg
      721 ggtgagccgg ccgagattcc gtcgaacacg tggccgttgc ggaggatcag tcgtgacatg
      781 gctagagatt agagccaggg ggcgaggcgt cgtagggtcc ggctcatggc cgcaaccagt
      841 ggagttcgga tttctcgact gacgggagtg ctgggcgccc ggctcgacgg ggtcacgctg
      901 tctccggaca tggatccgga cgatgtggca gtcctccggt cagcgctggt ggaccacgag
      961 gtgctggtgg tgccgggtca ggccttgtct ccaggagaac aggccgggtt cagccatctg
     1021 ctgggcgact actcgccggt gccgttcgtg caaccggtgc ccgagcatcc cgaggtgatc
     1081 aaggtcgtca aggaggccaa cgagaccgag gcgttcaatt ttggcggagt gtggcacagc
     1141 gacttctcct tcctggatgc tccgccggcg ttcacggtgc tgcacgctct agatgtgcct
     1201 cacgtggggg gcgacacgga gtgggcgtcg atgacggcgg cccatgacca actacctgcc
     1261 gacatgcgcg agcagttcga ggaggtcacg tgcgttcact cggcgagcgc cagctactct
     1321 cccgcccagc aggagctcca ttcggggctg tcgggcatgg acatccggac atcggagtcg
     1381 gccgaggaga cccgggaaca tccgctgctg tgcacgcatc ctgagacggg gaagcgaagc
     1441 ctgttcttca acggcacgta tgttcgggcg ctccgtggtc caggcgtggg tgatggaacc
     1501 gaggcaggtt cccgcgagga atcccatcta ctcaagtggc tgcacgagtt cacgacccat
     1561 gtgcgattca caatgcggca ccgctggtcc gacggcgacg tggtgctgtg ggacaaccgg
     1621 tccacacagc acgtggcact caacgactac gccggccagc ggcgcgagtt gcaccgcacc
     1681 acggtggcgg ggtcagaacc agccacctga cggtcccacc tgacccggcg ctcggcccca
     1741 ttcctgttcg ctgtaagaat cggaggcgcc cccaccagtt cgatgggaga accggaatca
     1801 atcgtctcga aggagctcga tcagggcgct ggtgtcccag cgaccgtggc cttcacgctg
     1861 gagccgggcg tagaactggt cgaccatggc ggtgacgggc agggtggcgc cgatgcgttg
     1921 ggcctcgtcg aacacgatgc cgaggtcctt tcgcatccag tccaaggcga atccgtggtc
     1981 gaagtgccga tcgagcatgg ttcgggcccg gttgtccatc tgccatgacc cggatgctcc
     2041 ggcgctgatg gctgacagca ccttctcctc gtcgaggccg gagcggcgcc cgaagtccag
     2101 agcctcggat aggccctgaa tgagaccggc gatgcaaacc tggttgacca tcttggtgag
     2161 ctgcccggaa cccgtgtcgc caatgaggac cgtcgccttt gcgtagacgt cgatgaccgg
     2221 ctctacgccg gcaaacacat cggcgtcacc gccgcacatg acggagagct gaccattctg
     2281 ggcgccggcc tgcccgcccg agaccggcgc gtcgatgaag ccgaccccga gttcgtcggc
     2341 ggccgctcgg atctcacggg ccacttcagc agacgccgtg gtgtggtcga ccagtgtggc
     2401 cccggacgcc atgccggcca gcgctccgtc gtcaccaaac accacggacc ggaggtcgtc
     2461 gtcgttccca acgcaaacca tcacgaactc cgcgcccgcc acggcctctc ggggtgtggg
     2521 cgccgatatg ccgtcatgct cagcgaccca gtcgtcagcc ttggtggcgg tgcggttgta
     2581 gacggtggtg gcgtacccgg cggccttgag gtggccagcc atgggatacc ccatgactcc
     2641 gaggccgatg aatgcacagt tcggcatggt ggtgatctcc ttctcgggtt tcgagttcgg
     2701 ctttcgggtt gtgaaccttg gacggcctta gtggcccgcc gccaggtttg ccattgcctc
     2761 gaacaggttg ggaatgctct cgtcgccgcc gtcgatctca cggtaggcgg cccggacgtt
     2821 caccgcgaga cgttcccact cgccccattc gcggtagggc tggaacgttt cgctggaagc
     2881 caactccgcc actgcgtccg ctgcggtgag gccggcagcg tgggtctccc gacaggcgcc
     2941 ctcaagccag gtgaggtagt cacggactgc ttggacacca gcggcgtcgg taagcggccc
     3001 atgcccgggg atgatgaccg ctgcgccgtt ggcgacgtcc gcatccagtt ccaggatccg
     3061 gtcgcacgcg gcgacccagt tggaaatggg cccgtcccaa acgatcgggg tgccgttcac
     3121 gaacaggatg tcgccggcga acaccacgcc agcgtcgggc aaatggacca gcaagtcgcc
     3181 agcggtgtgc gcgggaccta cctgctgcag ggcgacacga cggccgccga cctcgaggtc
     3241 cagcatgccg gtgaaggtac gggtgggctc gggaacctcg atgccctcga aggtgaaccc
     3301 gccaaaggcc cgctggacgt agtcgttggt gacctcgccc atgtcggcgg ccagcagggc
     3361 aaccagggcc gacggaggca cggcacccat ctcgcgggcg gcagcctcgg tggtgacgat
     3421 ctcagcctca ggaagcaggc cgtttccata gcagtggtca ccgttggcgt gcgtgttgac
     3481 caccgtgcca atggggtggg agccggtgat cggggccatg gcgtcgagca tcttccgggt
     3541 caggacctga tcgaagaggg tgtcgacgag aaccgagccg tcggcggtgg ccagcaggcc
     3601 ggcattggac caaccccatc ccccgtcagg ctgtagatat gcgaagacgc cgtcagccac
     3661 ctcatggagg ccggtctcgt agggaatgtc ggcggttctt ccgcttgcca gtcttccgtc
     3721 cgctgccaca ggccgaccct aggtgccgcc gaccgggtac tcctgaccga ccgacgatcg
     3781 gaacacccgt ttggggccgc cgtcggaccg gtcacgatca ccggcgtcga gcccgacaag
     3841 caggacggcg acagaccggg tcagttcctt ttgcgtagtg aggatgttcg tcgcatccaa
     3901 gg
//
LOCUS       DASCMR010000384         2333 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001867559, whole genome shotgun sequence.
ACCESSION   DASCMR010000384 DASCMR010000000
VERSION     DASCMR010000384.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2333)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2333)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2333
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001867559"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..372
                     /locus_tag="QGG16_08845"
     CDS             <1..372
                     /locus_tag="QGG16_08845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HJP25422.1"
                     /translation="GSLGYALAVKNLYVMNVEYYTGVDERLDIPVILPPYVDWVDLGD
                     KKILIVDDVADTGHTLALVHETATEAVAEVRSAVLYQKPQSVVDCEYVWRHTDQWINF
                     PWSTEPPVVDLQGAGTAVLDA"
     gene            complement(398..1858)
                     /locus_tag="QGG16_08850"
     CDS             complement(398..1858)
                     /locus_tag="QGG16_08850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HJP25423.1"
                     /translation="MTSPSLPKSDAELARIDAVGLADLIRSGQLSPVEAVEATIDRIE
                     RLDGDLNAVIHEQFDQSLELAASPDLPDGPFRGVPMLIKDLWATEAGQPHHAGVQALK
                     EAEFTGEVDSNLVARYKQAGFVIVGRTNTPELGLVATTEPHAYGPSRNPWSTDHSTGG
                     SSGGAAAAVAAGMLPAAHASDGGGSIRIPAAMCGLVGLKPSRGRISNGPREEWSFSCQ
                     HVVSHTVRDTAAILDATAIPFAGDGVVAPDHGRPYAGCVDADPGRFRIGLMPDNHRNE
                     THPDCEAATRRTADLLSNLGHEVVESRPEAFLHLGELKDLAWAFTVNWSVGAVVSLSI
                     LGEQLGRTVTADDVEPGTWAMAQRGEGYSGPDFSRAQSILGGWRRSMAQWWNDFDVLL
                     TPTTAQPPARIGELTPTDDDPVRGSKRSLPYSVYTSPFNCTGQPAISLPLGSSDGLPI
                     GVQLVGAYGREDQLLSVGGQLERAINWSAHRAPIHA"
     gene            complement(1888..2262)
                     /locus_tag="QGG16_08855"
     CDS             complement(1888..2262)
                     /locus_tag="QGG16_08855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015439894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HJP25424.1"
                     /translation="MATSDPLLDALRPVVEALRGALVPPAEADGEDVEVVWNGVVVAA
                     VRRPDPHLDLHNALLTLIAEVEHDMGHPCAEMDRSQKQEAVALLNERGAFTLRKSVED
                     VAEALGVSRFTVYNYLERAEAG"
BASE COUNT          375 a          732 c          831 g          395 t
ORIGIN      
        1 ggctcgctgg gctacgcact ggctgtcaag aacctctacg taatgaacgt cgagtactac
       61 accggcgtcg acgagcgtct cgacattccg gtgattttgc cgccctatgt cgactgggtg
      121 gacctgggcg acaagaagat cctgatcgtc gatgatgtag ccgacaccgg tcacacgttg
      181 gccctggtgc acgagacggc aaccgaagcg gtagccgagg tgcgttctgc agtgctgtac
      241 cagaagcccc agtcggtggt cgactgcgag tacgtctggc gccacactga tcagtggatc
      301 aacttcccgt ggtcgaccga gcctccagtg gtcgaccttc agggcgctgg caccgccgtc
      361 ctagacgcct gaatatctcg aatcgtcgga gcccggatca ggcatggatg ggggcccggt
      421 gggccgacca gttgatggcc cgctccagct ggccacccac ggagagcaac tggtcctcac
      481 ggccgtaggc gccgaccaac tggacgccga tgggtaggcc gtccgatgaa ccgagcggca
      541 gcgagatggc tggctggccg gtgcagttga acggcgacgt gtacaccgaa tagggcagcg
      601 atcttttcga gcctcgcacg gggtcgtcgt cggtgggcgt gagctcgccg atacgggccg
      661 gtggctgggc agtggttggc gtcaacaaca cgtcaaagtc gttccaccac tgcgccatgg
      721 agcggcgcca gccgccgaga atggactggg cccgggagaa gtcggggccg ctgtagccct
      781 cgccccgctg ggccatggcc caggtcccgg gttcgacgtc gtcggcggtg acggtccgac
      841 ccaactgttc gccgaggatg gacaggctga ccacggcgcc caccgaccag ttgacggtga
      901 aggcccaggc cagatccttg agttcgccga ggtgcaggaa ggcctccggc cgggactcga
      961 ccacctcgtg gcccagattg gagagcaggt cggcggtgcg gcgggtggcc gcctcgcagt
     1021 cagggtgggt ctcgttgcga tggttgtcgg gcatgaggcc gatccggaag cgacccgggt
     1081 cggcgtccac acatccggcg taaggccgcc cgtgatcggg agccaccacg ccatcaccgg
     1141 cgaacgggat ggccgtggcg tcgaggatgg ctgccgtgtc acggacggta tggctcacca
     1201 cgtgctggca cgagaacgac cactcctccc ttggaccatt ggagatccga ccccgcgatg
     1261 gcttgaggcc gaccaggccg cacatggcgg ccgggatccg gatggacccg cccccgtcgc
     1321 tggcgtgggc ggccgggagc atgccagcgg ccactgcggc ggctgcacct ccggacgagc
     1381 ctccggtgct gtggtcggtg ctccacggat tgcggctggg cccgtaggca tgtggttcgg
     1441 tggtggccac gaggcccagc tcaggggtgt tggtccggcc cacgatgacg aagccggcct
     1501 gcttgtagcg ggcgaccaga ttcgagtcga cttctccggt gaattccgct tccttgaggg
     1561 cctggactcc ggcgtggtgt ggttgcccgg cctcggtggc ccacaggtcc ttgatgagca
     1621 tgggtacgcc tcggaacggc ccgtcgggca ggtcgggtga ggccgccaac tcgagggact
     1681 ggtcgaactg ctcatggatg accgcgttca gatcgccgtc gaggcgttcg atccggtcga
     1741 tggtggcctc caccgcctcg accggtgaga gttgcccgct gcggattagg tcggccaggc
     1801 cgacggcgtc gatccgtgcc aactctgcat cggacttagg aagggatggg ctggtcatgg
     1861 ccgcggaccg taccggaggc ccacgatcta gcctgcttcg gcgcgctcca ggtagttgta
     1921 gacggtgaag cggctcaccc cgagcgcctc ggccacgtcc tccacggact tacggagggt
     1981 gaacgctccc cgttcgttga ggagcgccac ggcctcctgc ttctgggagc gatccatctc
     2041 ggcgcacgga tggcccatgt cgtgttcgac ctcggcgatg agggtgagaa gggcgttgtg
     2101 taggtccagg tgtgggtcgg gccggcggac ggcggcaacc acgacgccat tccacacgac
     2161 ctcgacgtcc tcgccgtcgg cttcggccgg tggaaccagc gcgcccctga gtgcctcgac
     2221 gactggccga agcgcgtcca ggagtgggtc ggaggtggcc acgggggcac cctagccccg
     2281 accccttagt tgacaaaatg ttgacgaatg gggcgcggca cggcagcatg ttg
//
LOCUS       DASCMR010000385         2561 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001872376, whole genome shotgun sequence.
ACCESSION   DASCMR010000385 DASCMR010000000
VERSION     DASCMR010000385.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2561)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2561)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2561
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001872376"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2561)
                     /gene="dnaE"
                     /locus_tag="QGG16_08860"
     CDS             complement(<1..>2561)
                     /gene="dnaE"
                     /locus_tag="QGG16_08860"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0008408 - 3'-5' exonuclease activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HJP25425.1"
                     /translation="LKSAVEMRDLFRDVPSACDNTLWIAERCEVEIEFGNPQLPDFPI
                     PEGFDGADSYLEHLTFEGARKRWGDQLEDKVVERLAYELTTIREMGFSSYFLITWDLI
                     SHARGRDIRVGPGRGSAAGCAVAYCLWITDMDPIEYDLLFERFLNPSRISMPDIDMDF
                     DSRYRDEMIRYASEKYGRDHVAQIVTFSQIKARAAVRDAARVLGYPYGMGDRIAKAIP
                     PLIMGRDTPLAACLEETEKHADGFKMASDLRDMYTVDDDVKAVVDVAKGLEGLRRQDG
                     IHAAAVVITREPLTDYLPIQRKPESGQDPEDAPVVTQYEMHGVEDLGLLKMDFLGLRN
                     LDVITDTLALIERTTGQVVDIDEVDLEDAPTYEMLTRGDSIGVFQLESGPMRSLMRSL
                     APTAFEDVAALVALYRPGPMAANMHNDYADRKNGRKEVEFFHADAEELLADTYGLMIY
                     QESVMRVAQKFAGYSLADADNLRKACGKKDRELMAKERTSFVEGCTARGYGRQLGDEL
                     FDTVEQFADYAFNKSHSYGYGYIAYQIAYLKAHFPVQYLAALLTSVKSNLDKAAVYLN
                     ECRVLGIEVTVPDVNVARSDFEPVPVLEVGDNAKNGAANGVATGSASKGSAGRIVFGL
                     SAVRNVGEGLVERLVAERDANGPFMDFNDFCERCDTTVLNKRTIESLIKAGAFDAMGH
                     TRQGLLHAHEQIIDHTVARRKEHDMGVMSLFGEVEGDGPTFDERIAIADVEFDKMTRL
                     AFEKEMLGLYVSDHPLLGYEAALRRRCDASITELEDAEEGVFRTVGGVVTNLDKKWTR
                     KGDLMAVFALEDLGASMEVMVFPKTMADHGHKLADDVIVLVKGRIDRRDDLSKII"
BASE COUNT          469 a          835 c          761 g          496 t
ORIGIN      
        1 cagatgatct tggagagatc gtctcgccgg tcgatccgtc ccttgaccag cacgatcacg
       61 tcgtcggcca acttgtgtcc gtggtcggcc atggtcttgg ggaagaccat cacctccatg
      121 gaggcgccca ggtcctccag cgcgaatacg gccataaggt cgcccttgcg cgtccacttc
      181 ttatccaggt tggtgaccac gccgccgaca gttcggaaca cgccctcctc ggcatcctcc
      241 agttcggtga tcgaggcgtc acaccgacgc ctcagggcag cctcgtagcc caggagggga
      301 tggtccgaaa cgtacaggcc cagcatttcc ttctcaaagg ccagacgggt catcttgtcg
      361 aactcgacgt cggcaatggc gatccgctca tcgaaggtcg gcccatcacc ctcgacctca
      421 ccgaagagcg acatgacgcc catgtcgtgc tccttccggc gggccactgt gtggtcgatg
      481 atctgctcgt gggcgtgcag gaggccctgc cgagtgtggc ccatggcgtc gaacgccccg
      541 gccttgataa gcgactcgat cgtgcgcttg ttgagcaccg tggtgtcaca ccgctcgcag
      601 aagtcgttga aatccatgaa cggaccattg gcgtccctct cggccaccaa acgctcaacc
      661 aaaccctcac ccacgtttcg gaccgctgag agaccgaaca caatgcggcc agccgacccc
      721 ttcgacgcgg acccggttgc gaccccgttc gcagcaccgt tctttgcatt gtcaccgact
      781 tcgagcacgg gcaccggctc gaagtcggat cgcgccacgt tcacatctgg caccgtcacc
      841 tcgatgccca gcacccgaca ctcgttcagg tagacagccg ccttgtctag attcgatttc
      901 acgctcgtca gcagggccgc aaggtattgg accgggaagt gcgctttcag gtaggcgatc
      961 tggtaggcga tgtagccgta cccgtaggag tggctcttgt tgaaggcgta atcggcaaac
     1021 tgctccacgg tgtcgaagag ttcgtcgccc agctgcctgc cgtaccccct ggccgtacag
     1081 ccctccacga aggaggtccg ctcctttgcc atgagttcgc ggtccttctt gccacacgcc
     1141 ttgcgaaggt tgtcggcgtc ggccaacgag taaccggcaa acttctgggc cacccgcatt
     1201 accgactcct gatagatcat gagcccataa gtgtccgcca gtagttcctc agcatcggcg
     1261 tggaagaact cgacctcctt acggccgttc ttccgatcgg cgtagtcgtt gtgcatgttc
     1321 gctgccatcg gacccggccg gtacaacgcc acaagggcgg ccacgtcctc gaatgccgtc
     1381 ggcgccagcg accgcatgag ggatcgcatg gggcccgact ccaactggaa taccccaatg
     1441 gagtcgcccc gagtcagcat ctcgtaggtg ggggcgtcct ccaagtccac ctcatcgatg
     1501 tcgaccacct gaccggtggt gcgttcgatg agggccagag tgtcagtgat gacatccaga
     1561 ttgcgaaggc ccaggaagtc catcttgagt agcccaaggt cctccacgcc atgcatctcg
     1621 tactgggtga ccaccggggc gtcctcgggg tcctgtccgg actcgggctt tcgctggatg
     1681 ggcaggtagt cggtcagcgg ttcacgggtg atgaccacgg ccgccgcgtg gatcccgtcc
     1741 tggcggcgca ggccctcaag acctttggcc acatcgacca cggccttcac gtcgtcgtcg
     1801 acggtgtaca tgtcccggag gtcggacgcc atcttgaacc cgtcggcgtg cttctcggtt
     1861 tcctccaggc aggccgccag cggggtatcg cggcccataa tgagcggcgg tatggccttg
     1921 gcgatccggt cgcccattcc gtacgggtag ccaagcacgc gggccgcgtc gcgtacggcg
     1981 gcccgggcct tgatctggga aaacgttacg atctgggcaa cgtgatcacg gccgtacttt
     2041 tcggatgcgt agcggatcat ctcgtcgcgg tatcgcgagt cgaagtccat gtcgatatcg
     2101 ggcatggaga tacggcttgg attcaggaac cgctcaaaca gcaagtcgta ctcaatggga
     2161 tccatgtcag taatccaaag gcagtaggcc accgcacagc ccgccgcgct cccccggccc
     2221 gggccgaccc ggatgtcccg gccacgggcg tggctgatga ggtcccacgt gatcaggaag
     2281 tacgacgaga agcccatttc gcgaatcgtg gtgagttcgt aggccaaacg ctcgacgacc
     2341 ttgtcctcca actggtcacc ccaccgcttg cgtgcaccct cgaaggtcag gtgctcgagg
     2401 taggagtcgg ccccgtcgaa cccctcgggg ataggaaagt cgggtagttg cgggtttccg
     2461 aactcgatct ctacctcgca ccgctcagcg atccacaggg tgttgtcgca cgccgatggc
     2521 acgtcacgga ataggtcgcg catctcgacg gccgacttca g
//
LOCUS       DASCMR010000386         2143 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001874630, whole genome shotgun sequence.
ACCESSION   DASCMR010000386 DASCMR010000000
VERSION     DASCMR010000386.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2143)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2143)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2143
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001874630"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(135..878)
                     /locus_tag="QGG16_08865"
     CDS             complement(135..878)
                     /locus_tag="QGG16_08865"
                     /inference="COORDINATES: protein motif:HMM:NF013757.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HJP25426.1"
                     /translation="MQTIERTFSVLRALAGQSDSVGVSEVARTTGLAKSTCSRILSSL
                     DELGIVERVDEAGRYVIGPGLRALAAAGAPVGTLRDLAEPYLRELAGRLGESAALSVM
                     DGGEGLYVTQVAAPGPVQVTDWTGQRFPLHTIAAGQAFMGSWTDEQVAGYAANGLAEY
                     TERTVTTLAGLRQRVGEVRRRGVAWTLGEFSEEITGVAAPVCDPDGDAVASVSVYGPG
                     WRFPGDADTTEIERVVRETAERVGALLGG"
     gene            976..>2143
                     /locus_tag="QGG16_08870"
     CDS             976..>2143
                     /locus_tag="QGG16_08870"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HJP25427.1"
                     /translation="MRNDAQCVIIGGGAMGVGLLYHLAHEGWTDTLLIEKGELTSGST
                     WHAAGLVPHFIGSLNMAKVHAYGAELYTTLEAETGMSTGWHGCGAIRLAVNHEQAEWY
                     RYVDAMLDSIGIESHLIGHDEIRAMAPLMESIDDVVLGFHTPHDGWSDPTGSTNAMAV
                     GARQLGARIARHTLVTDVTQLPDGRWQVTTQTGDGNASEQQQITCDHVVNAAGHYAPQ
                     LGAMSGIDVPIVSMIHQYLITEPLDAMKACDVEMPVIRDPRSSCYYRREIDSLLIGPY
                     ETRDSITYGVDGIDWNLHFHLTPPDLEQLAPWLEISTERFPVFAEAGIKQVVSGPITH
                     TPDGGYLMGPVAGARNYWMCAGASIGITQGPGAGKYLAQWMVHGQTEINVREMDP"
BASE COUNT          395 a          858 c          585 g          305 t
ORIGIN      
        1 ccccggtccg cggcgtaaag gccggtggcg gtacacgaat ggccgtccac cacctcagcg
       61 ggcccgatga ctaccggttc agcgtcgacc cccacacccg tggaatctac ggaacggcca
      121 cccagaccgc tcagctagcc ccccagcaat gcccccacgc gctcagctgt ctcccggacg
      181 acccgttcga tctcggtggt gtcggcgtca ccggggaacc tccaacctgg gccgtagacc
      241 gacaccgacg ccacggcatc accgtccggg tcgcacaccg gcgccgccac tccggtgatc
      301 tcctcggaga actcacccaa cgtccaagcc acgccccgcc ggcgcacctc acccacccgt
      361 tggcgaaggc ccgccaatgt ggtcacagtg cgctccgtgt actccgccag cccgttggcc
      421 gcgtacccgg ccacctgctc gtcggtccat gaccccataa aggcctggcc cgccgcaatg
      481 gtgtgcagcg ggaaccgttg acccgtccaa tcggtcacct gtacgggccc gggtgccgcc
      541 acctgggtca cgtaaagccc ctcgccacca tccatcaccg acagggccgc cgactcaccc
      601 agccgcccgg ccaactccct caggtatggc tcggccaggt cgcgcagcgt ccctaccggc
      661 gcccccgctg cggccaacgc ccgcaggccc ggcccgatca cgtaccgccc ggcctcgtcc
      721 acccgttcca cgatccctag ctcgtcgagg ctggacagga tccgtgagca cgtcgacttg
      781 gccaacccgg tcgtccgggc cacctcggag acgcccaccg agtcgctctg gcccgccaag
      841 gcccgcagca cactgaacgt tcgctcaatc gtctggattc cggtagtcta ggacaccact
      901 caccggaacg ttccattaaa tggaacagtc tctgggcggc catccctgat aagtcgcccc
      961 gaaaggcagg ccaccatgcg caacgacgcg cagtgcgtga taatcggggg cggcgccatg
     1021 ggcgtcggcc tcctctacca cctggcccac gagggctgga ccgacaccct cctcatcgag
     1081 aagggcgaac tcacgtcggg ctccacctgg cacgccgcag gcctcgtccc gcacttcatc
     1141 ggcagcctca acatggccaa ggtccacgcc tacggcgccg agctgtacac caccctcgaa
     1201 gccgagaccg gcatgtccac cggctggcac ggttgcggcg cgatccgcct cgccgtcaac
     1261 cacgaacagg ccgagtggta ccgctacgtc gacgccatgc tcgattcgat cggcatcgag
     1321 tcgcacctca tcggacacga cgagatccgc gccatggccc ccctcatgga gtccatcgac
     1381 gacgtcgtcc tgggattcca caccccccac gacggctggt ccgaccccac cgggtccacc
     1441 aacgccatgg ccgtcggcgc ccgccaactc ggcgcccgaa tcgcccgcca cacgctcgtc
     1501 acggacgtga cccaactgcc cgacggccgc tggcaggtca cgacccaaac tggagacggg
     1561 aacgccagcg aacagcaaca gatcacctgc gaccacgtcg tcaacgcggc cggccattac
     1621 gccccccagc tgggcgccat gtctggcatc gacgtcccca ttgtttcgat gatccaccag
     1681 tacctcatta ccgaaccgct cgacgccatg aaggcatgcg acgttgagat gcccgtcatt
     1741 agagaccccc gctcatcgtg ctactaccgc cgcgagatcg acagcctgct catcggccca
     1801 tacgagaccc gcgactccat cacctacggc gtcgacggca tcgactggaa ccttcacttc
     1861 cacctgaccc cacccgacct tgaacagctc gcaccgtggt tggagatctc caccgaacgc
     1921 ttcccggtgt tcgccgaagc aggtatcaaa caggtggtca gcggccccat cacccacacc
     1981 cccgacggcg gctacctcat gggccccgtc gccggcgcac gcaactactg gatgtgcgcc
     2041 ggcgcctcca tcggcatcac ccaggggccg ggcgccggga agtacctcgc ccagtggatg
     2101 gtccacggcc agaccgagat caacgtccgc gaaatggacc ccc
//
LOCUS       DASCMR010000387         2150 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001876019, whole genome shotgun sequence.
ACCESSION   DASCMR010000387 DASCMR010000000
VERSION     DASCMR010000387.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2150)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2150)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2150
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001876019"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..201
                     /locus_tag="QGG16_08875"
     CDS             <1..201
                     /locus_tag="QGG16_08875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25428.1"
                     /translation="GVGIPEGFDVADATGLGLTIVRTFVEGELGGRIRLVPVERGRGT
                     VAEVWVPTNRLVGPWGDSRDPG"
     gene            244..978
                     /locus_tag="QGG16_08880"
     CDS             244..978
                     /locus_tag="QGG16_08880"
                     /inference="COORDINATES: protein motif:HMM:NF015000.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HJP25429.1"
                     /translation="MRPERPDGRPLVVAHRGASYDRIENTVEAFVEARVQGADWVELD
                     VRLSADDVLMVHHDAHLADGRLVREVRAADAPDHIPNLAEAFEACDGMGVNVEVKNLP
                     GDPDHDASAMVCEAVAGLAVAYRSPKQLLVSSFDITAVDRIRATDPSLPTAWIVAERH
                     GTDLMLDRTASHGHGSVNPWDELVDEHLVSASQDRGLAVLVWTVDDPGRMAELIDWGV
                     DGIVTNRPGLARAVIDGRRDGTWVDG"
     gene            complement(1018..2049)
                     /locus_tag="QGG16_08885"
     CDS             complement(1018..2049)
                     /locus_tag="QGG16_08885"
                     /inference="COORDINATES: protein motif:HMM:NF012981.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HJP25430.1"
                     /translation="MPLPDERSRVPTMKLLLIVNPSASSVTARTRIVIQKALSADHRL
                     EVAATTRRGHATRLAQSAANDGIDVVVVLGGDGTLNEAANGLVGTETALAALPGGSTN
                     VFARTLGLPDDPVEATGALLDAIDAAAIRRVGLGSVNDRHFLFHAGIGFDAAVVEQVE
                     RRGGLLKRFAGHPLYIAATIDTWIRHYDHRRPAFRVTFPTDVDPTTGQSTGGTSDGGP
                     GIPGVFAACLNTDPYTYLGTRGLSLAPAATLDSPLSVATFRNLSAVTLATTLAAALGL
                     QSARRPRSDGRAGLEVRDGVELAEVIASRPLPWQVDGDHVGEAERLVVRHHPDVMDLV
                     VPLASPAFS"
BASE COUNT          347 a          659 c          805 g          339 t
ORIGIN      
        1 ggcgtgggaa tcccggaggg gttcgatgtg gccgacgcca ccgggctcgg cctgaccatc
       61 gtgcggacct tcgtggaagg cgagttgggg gggcgtatcc gcctggtgcc ggtcgagcgg
      121 ggccgtggca cggtggccga ggtgtgggtc ccgaccaacc ggcttgtcgg accgtggggg
      181 gattcacgag atccggggtg atgggaccgc ctgggtgaag tgggcgacct agggtcgttg
      241 cccgtgagac ccgaacggcc cgatgggcga ccgctggtgg tggcccaccg cggtgcgtca
      301 tacgaccgga tcgagaacac ggtggaggcc ttcgtcgagg cccgggtaca gggtgccgac
      361 tgggtcgaac tcgacgtgcg actctcagcc gacgacgtgt tgatggtcca ccacgacgcc
      421 catttagccg acggccgcct agtgcgcgag gtgcgggccg ccgatgcacc ggaccacatc
      481 cccaacctgg cagaggcctt tgaggcctgc gacgggatgg gcgtcaacgt cgaggtgaag
      541 aaccttcccg gcgacccaga ccatgatgca tcagccatgg tgtgcgaggc ggtggccggt
      601 ctggctgtcg cctatcggtc gcccaagcag ttgctggtgt cgtcgttcga tatcacggcg
      661 gtggaccgga tccgggccac cgatccgtct ctgcccaccg cgtggatcgt ggccgagcgt
      721 cacgggaccg acctgatgct ggaccgcacg gcgtcccacg ggcacgggtc ggtgaatccg
      781 tgggacgaac tggtcgacga gcatctggtg tcggcctccc aagatcgtgg tctggccgtg
      841 ctggtgtgga cggtcgacga tccgggacgg atggccgaac tgatcgactg gggggtcgac
      901 ggcattgtga ccaaccgccc cgggttggcc cgggcggtca tcgacggtcg gcgagacggc
      961 acctgggtcg acggctgacc ggaccccttg ttccaagccc gtctccatac ggtcgcccta
     1021 ggaaaaggcg ggcgaggcca gcgggactac cagatccatg acgtccgggt ggtggcgaac
     1081 caccaatctc tcagcttcgc cgacgtggtc gccgtctacc tgccaaggaa ggggacgcga
     1141 cgcgatcacc tcggccaact cgacgccgtc acgcacctca aggccggccc tgccgtccga
     1201 ccgggggcgc ctggccgatt ggaggccgag ggcggcggcc aaggtggtgg ccagcgtgac
     1261 cgctgagagg ttccggaagg tggccaccga gagggggctg tccagggtgg cggccggtgc
     1321 cagtgagagc ccccgggtac ccagatacgt gtaggggtcg gtgttgaggc aggcagcgaa
     1381 cacgccgggg atccccggcc ccccatcgga cgtcccgccg gttgattgac ccgtcgttgg
     1441 gtcaacgtcg gtgggaaagg tcacccggaa ggcgggccgc cggtggtcgt agtggcggat
     1501 ccaagtatcg atggtggcgg cgatgtagag gggatggccg gcgaaccgct tcagcaggcc
     1561 tccccggcgt tccacctgtt cgaccactgc ggcgtcgaac ccgatcccgg cgtggaacag
     1621 gaagtggcgg tcgttcaccg aaccaagacc cacccgacgg atggccgccg catcgatggc
     1681 gtccagcagc gcgccggtgg cctccacagg atcgtcgggc aggccgagtg ttcgggcgaa
     1741 cacgttggtg gaaccgccgg gcagcgcggc caacgcagtc tcggtcccga ctagtccgtt
     1801 ggctgcttcg ttgagggtgc catcaccgcc cagcacgacg acgacgtcga tgccgtcgtt
     1861 ggccgcactc tgggctaagc gggtggcgtg gcctcgacgg gtggtggcgg ccacctccag
     1921 tcggtggtcg gctgacagcg ccttttggat gacgatccgg gtccgagccg tgaccgacga
     1981 cgccgacggg ttgacgatga gcagcaactt catggtcggc acccgactcc gctcgtcggg
     2041 aagcggcatg tctcgagaag atgggtgatg gggtatcgca tcacgagacc gtcgcggcgt
     2101 tggtgcccat gaggggcagg aaaacgagat cgatgaggct cgagagaggg
//
LOCUS       DASCMR010000388         5208 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001883506, whole genome shotgun sequence.
ACCESSION   DASCMR010000388 DASCMR010000000
VERSION     DASCMR010000388.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5208)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5208)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5208
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001883506"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..222)
                     /locus_tag="QGG16_08890"
     CDS             complement(<1..222)
                     /locus_tag="QGG16_08890"
                     /inference="COORDINATES: protein motif:HMM:NF012655.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HJP25431.1"
                     /translation="MEESQGHKPAVEKRRIEILEAACAVMGKQGIAATRVGDVAKHLG
                     ISTGLLHYHCNTKDELLAAAFMHAAEKELA"
     gene            284..1327
                     /locus_tag="QGG16_08895"
     CDS             284..1327
                     /locus_tag="QGG16_08895"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HJP25432.1"
                     /translation="MAVATGHVVLSDLEKRFDDVAVVRGIDLDIASGEFFSLLGPSGC
                     GKTTTLRIIGGFERPDRGSVWIDGEEVTDLAPEHRPVNTVFQSYALFPHLTVERNVAF
                     GLRFQKVSTEEVGTRVARALDLVELGGLEGRRPHQLSGGQQQRVALARALILEPRVLL
                     LDEPLGALDARLRKALQVELRSLQQAIGITFVYVTHDQEEALTMSDRLAVMDEGRLVQ
                     VGTPREVYEEPIDGSVADFLGVANLLDVEHLGGGRVQVGDRVLRATGDGPVGRCRVVI
                     RPERVRLVEGEPDNGLPVVVERRVFTGATTQVHLRSGDVTFHALLANSGGVAGEGATH
                     AEMPVDALRLLAS"
     gene            complement(1349..2224)
                     /locus_tag="QGG16_08900"
     CDS             complement(1349..2224)
                     /locus_tag="QGG16_08900"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP25433.1"
                     /translation="MSRRRGRNPWRRPIGLATWTWAYVLWMFLPVAIAVLFSFNGGRS
                     RSVWQGFSLRWWTGEPNASLLHDETLHSALRNSLVLALLTMLVATPIGIALAIGLARW
                     RSRTASGANWLMLVPLVTPEIVMGASLLLVFTNLYTGIPLGRPAQLLGHVTFSISYVV
                     VVARGRLLSIGRDYEEAARDLGASQLQAIRLVLLPLLAPAIFAGFVIVFAMSIDDFVI
                     SAFLSSGAGSETVPVRIYSAVRTSSTPALNALASFLVASTLVALALGASVMSWFRRRR
                     GTKESALADLTSVGI"
     gene            complement(2221..3150)
                     /locus_tag="QGG16_08905"
     CDS             complement(2221..3150)
                     /locus_tag="QGG16_08905"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP25434.1"
                     /translation="MTGAPTSVTTSDGSRQRGDRGTLWGLFALPGTVWLLVLFVVPFY
                     ALVCVAFGDIDPVFRNAVPAWNPLNWSFGTAGEVLGEIFGGSLRKVFLRTISYVVCAV
                     VLSFFVGYPVAYYLARHAGRWRGLLLALMVLPFWVNYLMRMLAWVNLLQVDGWVTRAF
                     SVFGVQVNWLDGQPVTVVLGLVYGYVPFLVLPLYAALERLDGRLLEAARDLGAGPGRT
                     FRLVTIPLSRPGMLGAGVIIALPMFGDYYTNDMLSRSPATEMVGNQVDFYLNATTQPQ
                     KGAVLVLVLSALLVVLMSYYLVSTMRMQREIRA"
     gene            complement(3197..4450)
                     /locus_tag="QGG16_08910"
     CDS             complement(3197..4450)
                     /locus_tag="QGG16_08910"
                     /inference="COORDINATES: protein motif:HMM:NF024808.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HJP25435.1"
                     /translation="MKNRQPERRRPTTSASRSPVSRRQFLGGSAMAAGGLVLGPSILA
                     ACGSDGGSGTALKLARPDKPVTLPSVGDAVAAGKAHEGGTLQILNYVDYLNPDVVARF
                     EETYGVKTAVTTYDTEEGALNKLRSGAFTPDLIIGMTDSVLSRLVAAELLQPLNHSYL
                     SNFGNVIEGLRDPYYDVGAQYTTPYIIYSTGIGYRTDMDVDTSYFESGNGWDILWDPA
                     YSGRLGILDSYRDVIGSVLHRNGEDINTGDQKVLNAALEDLREMSAATNPKIDILAYT
                     EVPAGTRVVNQCWSGDMLLGVWYLPEDASWTELGYWQPDEMVTGNDVFCVARNAERPV
                     LAHEFINFFLDVDNALENFGWTGYQPALEALDAQTLIDWEYVPANLANALITPAQYAK
                     GNRAVALEPDVDARWTDVWAKFTAG"
     gene            4605..>5208
                     /locus_tag="QGG16_08915"
     CDS             4605..>5208
                     /locus_tag="QGG16_08915"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF012575.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic ring-hydroxylating dioxygenase subunit
                     alpha"
                     /protein_id="HJP25436.1"
                     /translation="MSTAMKPTLRGEEYRSPAVYDADLEGVFHRRWCYVGRSERLAHV
                     GDRLVVDVGAESVLVLRNRDGDLQAYYNVCRHRGSQLCDASGGGFGAAITCPYHAWSY
                     SLDGELVATPNVAKEELDRMAFPLHRVAVESWQGMLFVSLANDPPPLVDWLAESSDEI
                     LSFERLQLDRLRLGRLETSTVAANWKVVVENYAECLHCPQV"
BASE COUNT          943 a         1571 c         1814 g          880 t
ORIGIN      
        1 cgctagttcc ttttcggcgg cgtgcatgaa cgcggcggct aggagttcat ccttggtgtt
       61 gcagtggtag tggaggagac cggtcgagat cccgaggtgc ttcgccacgt cgcccacccg
      121 agtggcggcg atcccctgct tgcccatgac cgcgcaggct gcctcaagga tctctattcg
      181 acgcttctcg acggccggct tgtgcccctg cgactcttcc accgattgca ccatactgac
      241 tgacccgtca gttcatcgca gtccgagccg gtacgctgcg ccaatggcgg tcgccacggg
      301 ccacgtggtc ctttccgacc tcgagaagcg gttcgacgac gtggccgtgg tccggggcat
      361 cgaccttgac atagcgtccg gggagttctt ctcactcctc gggccgtcgg gatgcggcaa
      421 gaccacaacg ctgcgcatca ttgggggctt cgaacggccg gaccggggct cggtgtggat
      481 tgacggtgag gaggtgaccg acctagcgcc ggaacaccgc ccggtcaaca ccgtcttcca
      541 gagttacgcg cttttccccc acctcaccgt ggagcgcaac gtggccttcg ggcttcggtt
      601 ccagaaggtc tcaaccgaag aggtggggac gcgggtcgcc cgggcgctgg acctggtcga
      661 actcggtggc ttggagggcc ggcgccccca ccaactttcc ggagggcagc agcagcgcgt
      721 tgccctggcc cgagccctga tactggagcc gcgggtcctg ttgctcgacg aaccgttggg
      781 ggcgctggat gcccgactcc gcaaggccct tcaggtggag ttacgcagcc tccagcaggc
      841 gatcggaatc acctttgtgt acgtcaccca cgaccaggag gaggcgttga cgatgagcga
      901 ccgcttggcc gtgatggacg agggccgtct ggtgcaggtg gggacccctc gggaggtcta
      961 tgaggagccg atcgacggtt cggtggccga tttcctgggc gtggccaacc tcctcgatgt
     1021 ggaacacctg ggcgggggga gggtccaggt tggggaccga gtgcttcggg cgacaggtga
     1081 cggaccagta gggcgctgtc gcgtggtcat tcggcccgag cgggtccggc tggtcgaagg
     1141 agagccagac aacggactgc ccgttgtagt ggagcggcgg gtcttcactg gtgccaccac
     1201 ccaggtccat ctcaggagcg gggacgtaac ctttcatgcc ttgttggcca atagcggcgg
     1261 ggtggcaggc gaaggtgcta cccacgcgga gatgccggtc gacgccctcc gcttgctggc
     1321 cagctagccg atttccagac tgttgggttc agatgccgac tgaggtgagg tcggccagcg
     1381 ccgactcctt agttccgcga cgacgccgga accacgacat gacgctggct ccaagggcga
     1441 gggcaaccag cgtggaggcg acgaggaacg aggctagggc gtttagcgct ggcgtagagc
     1501 tggtccgcac ggccgagtag atccggacag gcaccgtctc cgacccagcc cccgaggata
     1561 ggaaggcgct gattacgaag tcgtcgatcg acatggcgaa cacgatcacg aaaccggcga
     1621 agatggccgg ggcgagcagc ggtaggagaa ctagtcggat ggcctggagc tggctagcgc
     1681 ccaggtctcg agccgcctcc tcgtagtccc gtccgatcga caggagccgg ccgcgggcca
     1741 ccacaaccac gtacgagatg gagaaggtca cgtggcccag cagctgggct ggtcgtccca
     1801 gcgggattcc ggtgtacagg ttcgtgaaga ccaacagcag cgaggcgccc atcacgatct
     1861 cgggggtgac gagcgggacc aacatcaacc agttggcgcc gctggccgtc cgggaccgcc
     1921 atcgggccag gcctatagcc agagcgatgc cgatcggggt tgccaccagc atggtgagga
     1981 gagccagaac caacgagtta cgcagggcac tgtgcagggt ctcgtcgtgg agaagcgagg
     2041 cattaggttc cccggtccac cagcgcagcg agaagccctg ccagaccgaa cgactacgcc
     2101 cgccattgaa cgagaacaag acggcgatgg ctaccggcag aaacatccag agcacgtagg
     2161 cccacgtcca ggtggcaagg ccgatcggcc gccgccacgg gttccgacct cgtcgcctgc
     2221 tcatgcccgg atttcccgct gcatccgcat agtgctgacc aggtagtagg acatgaggac
     2281 gaccagaagg gccgacagca ccaggactag gacggccccc ttctggggct gggtggtggc
     2341 gttcaggtag aagtcgacct ggttccccac catctcagtg gccggcgacc gcgacagcat
     2401 gtcgttcgtg tagtagtcac cgaacatggg cagagcgatg atcacaccgg ccccgagcat
     2461 cccgggacgc gacagtggga tggtcacgag gcggaacgtc cggcccggtc cggcccccag
     2521 gtcacgggcc gcctcaagga gccggccgtc gagtcgctcg agggcggcgt agagggggag
     2581 gactaggaac gggacgtagc cgtataccag acccagcacc acggtgaccg gctggccgtc
     2641 taaccagttc acctggaccc cgaacaccga gaaggcccgg gttacccagc cgtcaacttg
     2701 tagcaggttg acccaggcca gcatccgcat caggtagttg acccagaacg gcaggaccat
     2761 tagggctagg aggaggccgc gccatcgtcc agcgtgccga gccaggtagt acgccaccgg
     2821 atagccgacg aagaacgaga ggacgacggc acacaccaca taggaaatgg tgcgtaggaa
     2881 caccttccgg aggctccccc cgaagatctc gccgaggacc tcgcccgcag tgccgaagct
     2941 ccagttgaga gggttccagg ccgggacggc gttgcggaag acgggatcga tgtctccgaa
     3001 ggccacgcag accagcgcgt agaacggcac cacgaacagc accagtagcc agaccgtccc
     3061 tgggagggcg aacagccccc aaagggtgcc ccggtcaccg cgctgtcgtg acccgtcgga
     3121 ggttgttacg gaagttgggg cgccggtcac cgtcgttgct cagcgagaaa ggggtcgccc
     3181 ggcagtgggc cgaggatcag ccagcggtga acttggccca gacgtcggtc cagcgggcat
     3241 ccacgtccgg ctccagggcc acggctcggt tgcccttggc gtactgcgcc ggggttatca
     3301 gggcgttggc cagattggcc gggacgtatt cccagtcgat caacgtctgg gcgtccaggg
     3361 cctccagggc cggctggtag cccgtccacc cgaagttctc cagggcgttg tcgacgtcga
     3421 ggaagaaatt gatgaactca tgggccagga cgggacgctc ggcgttccta gccacgcaga
     3481 agacgtcgtt tccggtcacc atttcgtcgg gctgccaata gccgagttcg gtccatgagg
     3541 catcctccgg gaggtaccag acaccgagga gcatgtcacc tgaccagcac tggttgacta
     3601 cgcgtgttcc agcggggacc tcggtgtagg cgaggatgtc gatcttcggg tttgtggcag
     3661 ccgacatctc ccggaggtcc tccagggcgg cgttcaggac cttctggtca ccggtgttga
     3721 tgtcctcacc attgcggtgc aacaccgagc cgattacatc gcggtaggag tccaggatgc
     3781 cgaggcgacc ggaataggcg gggtcccaca ggatgtccca cccgttgccc gactcgaagt
     3841 aggacgtgtc gacgtccatg tccgtccggt agccgatccc cgtcgaatag atgatgtacg
     3901 gagtcgtgta ctgggcaccc acgtcgtagt aggggtcgcg gaggccctcg atgacgttgc
     3961 cgaaattgga caggtaggag tgattgaggg gctggagaag ttcagcagcc accagccggg
     4021 ataggacgga gtcggtcatc ccgatgatga ggtcgggcgt gaaggcaccg gagcggagct
     4081 tgttgagtgc cccttcctcg gtgtcgtagg tggtgacggc ggtcttgacg ccgtaggtct
     4141 cctcaaaccg ggcgaccacg tccgggttga ggtagtccac gtagttgagt atctgcaggg
     4201 ttccgccttc gtgggctttc ccagcagcca cggcgtcccc gacgctggga agcgtgaccg
     4261 gcttgtcggg ccgggccagt ttcagggctg tgcccgaacc gccgtcgctt ccgcaggcgg
     4321 cgaggatcga cgggccgagt accaggccgc cggcggccat agcggaacca ccgaggaact
     4381 ggcgcctact gaccggagag cggctcgcag aggtggtcgg gcgtcggcgt tcaggctggc
     4441 ggttcttcat ggatgggccc cctcgtggta gttctcgcga tggcgcggca ctatagtcag
     4501 ccactgactg actcgccagt cagtgccttc ggtcagagtc caggcggacc cggggggaag
     4561 ctatgacaag gcggggccca ctggggttcc gggaggaggg atacgtgtct acggcgatga
     4621 agcccacatt gcgaggggag gaatatcggt ctccagcggt ctatgacgcc gacctcgagg
     4681 gcgtcttcca ccggcggtgg tgctacgtcg ggcgctccga gcggctggct cacgtgggtg
     4741 atcgcctggt ggtcgacgtc ggtgctgaga gcgtcctcgt actccgtaat cgggacggag
     4801 atctacaggc ctattacaac gtgtgtcggc atcggggttc gcagttgtgt gacgccagcg
     4861 ggggcggctt cggagcggcg atcacctgcc cgtaccacgc ttggagctat tcgctggacg
     4921 gcgagttggt ggcgaccccg aacgtggcga aggaggagct tgaccgtatg gcgttcccac
     4981 tccatcgggt tgcggtggag agctggcagg ggatgctctt cgtcagcctg gccaacgacc
     5041 ctccgccgtt ggtggactgg ctggccgaaa gcagcgacga gattttgtcg ttcgagcggt
     5101 tgcagctgga ccgtctccgg cttgggaggc tggagaccag cacggtggcc gccaactgga
     5161 aggttgtggt ggagaactat gccgagtgtc tccactgccc gcaggtcc
//
LOCUS       DASCMR010000389         8018 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001883713, whole genome shotgun sequence.
ACCESSION   DASCMR010000389 DASCMR010000000
VERSION     DASCMR010000389.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 8018)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8018)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8018
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001883713"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..860
                     /locus_tag="QGG16_08920"
     CDS             <1..860
                     /locus_tag="QGG16_08920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP25437.1"
                     /translation="EFLPKILANEVEFAVGYSEPEAGSDAAAMKLKAVETEGGWTLNG
                     QKTWTTSAHFAEWYWVGARTNPDAPKHSGITLFLVPMDHPGITVQGIWTMGDERTNDV
                     FFDDVFVPDEYVVGQLDHGFQYISQALDLERFTMFTFSPIKQRLDLLIDHVRSACRDG
                     QPLKDDPKVRSRIARLATTAEVARGMGLRVVDASVKAEANGGAPPTIESSEYKLFTTE
                     FSKTLADASMDLGGPGTQLRVGTEEAPMAGRAESTYRYTVLDTIGGGTSEVQKNIITR
                     RGLGLPKNF"
     gene            879..2048
                     /locus_tag="QGG16_08925"
     CDS             879..2048
                     /locus_tag="QGG16_08925"
                     /inference="COORDINATES: protein motif:HMM:NF014564.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HJP25438.1"
                     /translation="MTTDRPLLDGITVLDLASVGPAVRASRWLADWGADIIKVGPVPR
                     DADVQINPPAYAYSAHRGMRRALLDLKSDGGRDAFLQLAAHADVVIESFRPGVVDRLG
                     IGYEALCTVNPRIVLCSTTGFGQTGPRAQWAGHDLNYLAVGGYLHCSGRGSDGSPALP
                     GATVADSAGGGLHAVAAICAALTARATTGKGTHLDVSIADGVLSLMSLAIDEYLADGT
                     EPGPRHGLLTGRYAWYDLYESSDGGWLAVGAIEPRFFANLCRILGCDQWAGLQYDDDA
                     VDAMRADFTGAFASRPRDEWVDLLGPADTCVTAVLDVPELLTDEQFRARRAFTEVTHP
                     TAGTIAQVAAPLAGQVDAADLPVYDMALPATDEILAAVGVSADRLASLRAEGIIA"
     gene            2045..2587
                     /locus_tag="QGG16_08930"
     CDS             2045..2587
                     /locus_tag="QGG16_08930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase N-terminal
                     domain-containing protein"
                     /protein_id="HJP25439.1"
                     /translation="MSTELAPITEEVTDRIGLVQYEEEGGFPVEHGYIWTTCAAVENG
                     NPLFWDETVADNLTDGPIAPPTMLSVWFRPHHWSPGRTEPAVPLQAHFDLKDDLHLPE
                     AIISSNTNTFHDPVRIGDRVRSRQILRSVSEPKTTRLGHGRFWTIDVEYLNQDDTLLG
                     VESYTAFGYRRADAEKGVGS"
     gene            2584..3069
                     /locus_tag="QGG16_08935"
     CDS             2584..3069
                     /locus_tag="QGG16_08935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25440.1"
                     /translation="MNRTVTRLVHGDVAIGDTLPGLGVDVTATTVVLGALASRDWRPM
                     HHDRDFAINRNGTQDIFLNTPNQAAWFERYVTDWTGPTGRLGRMTFRMNTSVFPGDHM
                     VFTSTVTGTEVDDAGCGWVDLDVALMVGEVAATTCATRVALPLDENDNPWARRGDAWR
                     P"
     gene            3081..4214
                     /locus_tag="QGG16_08940"
     CDS             3081..4214
                     /locus_tag="QGG16_08940"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP25441.1"
                     /translation="MDLAFTDEQDMLRKAVRSLCADAADSVRAMENDPKGFDDDFWQG
                     LAAMGLTGLMTSEALGGSDMGLLDAVVVYEELGRSLVPSPHLASAVVAAGVLATAGSD
                     AQQAEWLPAMATGDAVLSPAWLEPDNSSGPSGVQLTAQADPTRGDDREFVLTGVKRHV
                     PFASSADRLVVLARTGDRSEAIDLFLVDPTAPGVTLTLQPTVAGDTQYRVDLDGVRVT
                     ADDRIGEAGTGWTTWSSVMTDAMVLVAAQAVGAAEATHALTTEYAKERHQFDKPIGSF
                     QAISHYLADGITAIDGARVLVHRAAWTRDEGRDVASLAPMAKLFATQACRDVTGVAIQ
                     VHGGMGFTVECDAQLYFRRAKSWQLNWFDNDHLEDLIAAAVLD"
     gene            4332..6074
                     /locus_tag="QGG16_08945"
     CDS             4332..6074
                     /locus_tag="QGG16_08945"
                     /inference="COORDINATES: protein motif:HMM:NF012609.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PEP-utilizing enzyme"
                     /protein_id="HJP25442.1"
                     /translation="MGTSWIIEGSVDDRWPINTRGNVGEVFPEVLTPLSYRLGVIAAE
                     KAWRDAYAELGVAVKSDFAGDDPVIIGLYGGYAYLNLSYLRILGVRAPGSSPEAIDVA
                     FFGEGDPPPYEPRKGDRNLRSTLRILKSVMGALGTKAMPSMVAESYALADAHREACPP
                     LDASDEDLLAYLHAFPAAFGPAFKNHMLSSGLASIVAGFLADACAAAGQPGLVTHLLG
                     SAGDVKSAEYARDLYAIALTVQNQPTVAAAFDAGVAGLLQRLDGSRAGDSNVADFLER
                     FAAFVADHGHRGPNDWELSSRNWENTPEMALVAIDRMRLADHDLDPAARLADDGERRA
                     AAIAVVRPHVKGLDRKNFDKALAATGWWAQAREATRDRAIRIGAPTKQVYRELVRRAA
                     KRGGDPNPVRVALLDPLDELPAYLADPGAFANLLAERGALFDRYAAVEPRFFITSQDE
                     VPTIEELEADQAARAADTIAAPGDVLTGASGCQGVARGRARIVMDPADALDLEPGEVL
                     VAPITDPAWTPLFLPSAAVVVDVGALMSHAVIVSRELGIPCVVSVEGATRRIPDGALV
                     EVDGTAGTVTVLDG"
     gene            complement(6084..6728)
                     /gene="msrA"
                     /locus_tag="QGG16_08950"
     CDS             complement(6084..6728)
                     /gene="msrA"
                     /locus_tag="QGG16_08950"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HJP25443.1"
                     /translation="MFGHKPLSIPDPADALPGRPDVMAVPAAHFVNGRPLVGPFVDGI
                     ETVIVGMGCFWGAERMFWDTPGVWTTAVGYAGGHTPNPTYEEVCSGYTGHNEVVLVAW
                     ETAAIDLTSVLRVFWENHDPTQLMRQGNDVGTQYRSEIHVADATQRATAEATRNDFAP
                     RLAEAGYDEIVTGIVDRSEFFYAEEYHQQYLAKNPMGYCGLGGTGVSCPIGVTG"
     gene            complement(6786..7604)
                     /locus_tag="QGG16_08955"
     CDS             complement(6786..7604)
                     /locus_tag="QGG16_08955"
                     /inference="COORDINATES: protein motif:HMM:TIGR03083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maleylpyruvate isomerase family
                     mycothiol-dependent enzyme"
                     /protein_id="HJP25444.1"
                     /translation="MDITLDRDHILGGLAEIWNEWIDWAEGLSADDWATPSRCPGWTV
                     QDNLAHIIGTERMLRGEQAPQVEFPTEHLKNAIAAGNEQWVESMRSMSGAEVLDAFRT
                     ISTERLDQLNAMPDEEILKVGWSPVGEVPYLRFMHVRVYDSWLHLEDCRAPLGHPQGT
                     AGRPAEMSVAEVSTAAGFVIGKKAGAPDGSRVEVTLTGPVEATIRVAVDGRAAVVDEL
                     EGEPTVTLAMSSHDWLSLTGGRIDPQPLLDDGRVTVGGDVDLGTQMATRLAFTI"
     gene            complement(7667..>8018)
                     /locus_tag="QGG16_08960"
     CDS             complement(7667..>8018)
                     /locus_tag="QGG16_08960"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25445.1"
                     /translation="LDPGYVDAALADETTHDDVRADHDRVLGMGGWGVPTLVFPGADA
                     DDSRKLFGPVLIEPPTGEAAERLWDLVLGWLEFPHLYELQRPKTPADLHAVGEVFKPY
                     LDAREWQSVANPTP"
BASE COUNT         1332 a         2821 c         2580 g         1285 t
ORIGIN      
        1 aggagttcct ccccaagatc ctggccaacg aggtggaatt cgccgtcggc tacagcgagc
       61 ccgaggccgg ctcggacgcg gcggccatga agctcaaggc cgtcgagacc gagggagggt
      121 ggaccctcaa cggccagaag acctggacca cgtcggccca cttcgccgag tggtactggg
      181 tgggcgcccg caccaacccc gacgccccca agcactcggg catcaccctg ttcctcgtgc
      241 caatggacca tcccggcatc accgtgcagg gcatctggac catgggcgac gagcgcacca
      301 acgacgtctt cttcgacgac gtattcgtcc ccgacgagta cgtagtcggt cagctcgacc
      361 acggcttcca atacatctcc caggccctcg acctcgagcg gttcaccatg ttcaccttct
      421 cgccgatcaa gcagcgcctc gaccttttga ttgaccacgt gcgctcggcc tgccgcgacg
      481 gccagccact caaggacgat ccgaaggtgc gttcacgcat cgcccgtctg gccaccaccg
      541 ccgaggtagc ccgggggatg ggcctgcggg tcgtcgacgc ctcagtgaag gcagaggcca
      601 acggtggcgc accgccgacc atcgagtcct cggagtacaa gctgttcacc accgagttct
      661 ccaagacgct cgccgacgcg tctatggacc taggcggtcc aggcacccaa cttcgggtcg
      721 gcaccgagga agcccccatg gcggggcgag ccgagtcgac ctaccggtac accgtgctgg
      781 acaccattgg cggcggcacc tcggaggtgc agaagaacat catcacccgc cgcggcctgg
      841 gcctccccaa gaacttctag cccgacgggc atccaaccat gacgaccgac cgccctcttc
      901 tcgacggaat caccgtgctg gacctcgcct cggtggggcc cgcggtgcgc gcctcccgct
      961 ggctggccga ctggggtgcc gacatcatca aggtggggcc ggttccgcgt gacgccgacg
     1021 tgcagatcaa cccaccggcc tacgcctaca gcgcacaccg gggcatgcgc cgagccttgc
     1081 tggacctcaa gtccgacgga ggacgcgacg ccttcttgca actggccgcc catgccgatg
     1141 ttgtcatcga gagcttccgg cccggcgttg tcgaccgtct gggaatcggc tacgaggccc
     1201 tctgcaccgt gaatccccgc atcgtgctgt gctcgaccac cggcttcggc cagaccggcc
     1261 cccgggccca gtgggcgggc cacgacctca actatctggc cgtgggtggc tacctccact
     1321 gctcgggccg tggcagcgac ggcagcccgg cacttcccgg tgcgacagtg gccgacagcg
     1381 cgggcggtgg cctgcacgcg gtggccgcca tctgtgccgc actgaccgcc cgggcgacca
     1441 ccggcaaggg cacccacctc gacgtgtcga tcgccgacgg agtcctgtcg ctcatgtcgc
     1501 tggccatcga cgaatacctg gccgacggca ccgagcccgg accccgccac ggcctgctca
     1561 ccggtcgcta cgcctggtac gacctctacg aatcctccga cggcggctgg ctggccgtgg
     1621 gcgccatcga gccccgcttc ttcgccaact tgtgtcgcat cttgggctgc gaccagtggg
     1681 ccggactgca gtacgacgac gatgcggtcg atgccatgcg ggccgacttc acgggggcct
     1741 tcgcctcgcg cccccgcgat gagtgggtag acctcctagg gccggccgac acgtgcgtca
     1801 ccgcggtgct ggacgtaccc gaactcctaa ccgacgagca attccgggcc cggagggcgt
     1861 tcaccgaggt cacccaccca acggccggaa ccattgccca ggtggccgcc ccactagccg
     1921 ggcaggtcga cgctgccgat ctacccgtct acgacatggc cttgccggcc acagacgaga
     1981 tcctggccgc cgtcggtgtg agtgccgacc gactggcctc cttgcgagcc gaaggaataa
     2041 ttgcatgagc acggaactgg ccccgatcac cgaagaggtc accgaccgga tcgggctcgt
     2101 ccagtacgag gaagagggcg gcttcccggt cgagcacggc tacatctgga cgacgtgcgc
     2161 tgccgtcgag aacggcaacc cgctgttctg ggacgagacg gtggccgaca acctcaccga
     2221 cggaccgatc gccccgccga ccatgctgtc ggtctggttc cgcccccacc actggtcgcc
     2281 gggccgcacc gaaccagcgg tccccctgca agcccacttt gacctgaagg acgacctcca
     2341 cctgcccgag gccatcatct cgtcgaacac caacacgttc cacgacccgg tccgcattgg
     2401 cgaccgggtc cggtcccgcc agatcctccg atcggtcagc gaacccaaga cgacccgact
     2461 gggccacggt cgcttctgga ccatcgacgt ggagtacctg aaccaggacg acaccctgct
     2521 gggcgtggag tcctacacgg ccttcggcta ccgccgcgcc gacgccgaga aaggagtcgg
     2581 ctcgtgaacc gaaccgtgac tcgactggtc catggtgacg tcgcgatcgg tgacactctg
     2641 cccggtctgg gcgtcgacgt gacggccacc acggtcgtgc tcggcgcact ggcatcacgg
     2701 gactggcgac ccatgcacca cgaccgtgac ttcgccatta accgcaacgg gacgcaggac
     2761 atcttcctca ataccccgaa tcaggcagcc tggttcgagc gttacgtgac cgactggaca
     2821 gggcccaccg gccgactggg ccgcatgacc ttccgcatga acacctcggt gtttcccggc
     2881 gatcacatgg tcttcacgtc caccgtcacc ggtaccgagg tcgacgatgc cggatgcgga
     2941 tgggtcgacc tggacgtggc cctcatggtg ggcgaggtgg ccgccaccac gtgcgccacc
     3001 cgggtggccc tccccctcga cgagaacgac aatccctggg ctcgccgtgg cgatgcctgg
     3061 cgaccctagg agacccgacc gtggacctcg ccttcaccga cgaacaggac atgctgcgaa
     3121 aggccgtgcg cagcctgtgc gccgacgccg cggactcggt acgtgccatg gagaacgatc
     3181 cgaagggctt cgacgacgac ttctggcagg gcctagcggc catgggcctg accgggctca
     3241 tgacctccga agccctcggc ggctcggaca tggggctgtt ggacgctgtg gtggtctacg
     3301 aggaactggg ccgcagcctc gtgccctcac ctcatctggc gtcggcggta gtggccgccg
     3361 gcgtgctggc taccgccgga tccgacgccc agcaggccga atggctgccc gccatggcca
     3421 ctggcgacgc cgtgctgtcc ccggcgtggc tggagccgga caacagctcg ggccccagcg
     3481 gcgtccaact gactgcgcag gccgacccga ccagaggcga cgaccgggaa ttcgtcctga
     3541 ccggcgtcaa gcgacacgtc cccttcgcct cgtcggccga ccgactggtg gttctggccc
     3601 gaacgggaga ccgaagcgag gcgatcgacc tgttcttggt ggatcccacg gccccgggcg
     3661 tcacactgac cctccaaccg acggtggccg gcgacaccca gtaccgggtc gacctcgacg
     3721 gcgtccgggt gacggccgac gatcggatcg gtgaggccgg taccggctgg accacctggt
     3781 cgtcggtcat gaccgacgca atggttctag tggcggccca ggcagtaggc gctgccgagg
     3841 ccacccacgc cctgaccacg gaatacgcca aagagcgaca ccagttcgac aagcccatcg
     3901 gctcgtttca ggccatcagc cactatctgg ccgacggcat cacggccatc gacggtgccc
     3961 gggtgctggt ccaccgggcc gcttggaccc gcgacgaggg gcgggacgtg gcctcgctgg
     4021 cccccatggc caagctgttt gccacccagg cctgccggga cgtgaccggt gtggccatcc
     4081 aggtgcacgg cggtatgggc ttcaccgtgg agtgcgatgc ccagctgtac ttccgccggg
     4141 caaaatcctg gcagctgaac tggttcgaca acgaccacct cgaggacctg atcgctgccg
     4201 ccgtcctcga ctgacccgtc ccagaagatg ttgcttccga ctgggggccg gctggaagca
     4261 accggacgtg gatgccctaa cgtccggacc ctgtcagacg accggtctgc ggaggacgcc
     4321 gggggggcac catgggaacg tcttggatca tcgagggctc ggtcgatgac cgttggccga
     4381 tcaacacccg gggcaacgtc ggcgaggtct tccccgaggt cctaactcca ctctcgtacc
     4441 ggctgggggt gatcgctgca gagaaggcat ggcgtgatgc ctatgccgaa ctcggagtgg
     4501 ccgtgaagag cgacttcgct ggcgacgacc cggtgatcat cggcctctac ggcggctacg
     4561 cctacctcaa cctctcctac ctgcgaatcc tcggcgtccg ggctcccggg tcgtctccgg
     4621 aggccatcga tgtggctttc ttcggtgaag gtgatccccc gccctacgaa ccgaggaagg
     4681 gcgaccggaa cctccgctcc acgctccgga tcctgaagtc ggtgatgggc gctctgggca
     4741 cgaaggccat gccgtcaatg gtggccgaga gctacgccct ggccgacgcc caccgagagg
     4801 cctgtccgcc actcgacgcc tctgacgagg atctgctggc ctacctccac gcctttcccg
     4861 cggcctttgg tccggccttc aagaaccaca tgctctcatc gggcctagcg tcaatcgtgg
     4921 ccggctttct ggctgatgcc tgtgcagcgg caggtcaacc tggcctggtg acccacctac
     4981 tcgggtcggc aggtgacgtg aagtcggccg agtacgcccg cgacctgtac gccattgccc
     5041 tgacggtgca gaaccagccc acggtggccg ccgcctttga cgccggcgtg gccgggctcc
     5101 ttcaacggtt ggacggttct cgggccggcg attccaacgt ggctgacttc ctcgaacgat
     5161 tcgccgcctt cgtggccgac catggacacc gcggccccaa cgactgggag ctctcgtcgc
     5221 gcaactggga gaacacgccg gagatggccc tcgtggccat cgaccgcatg cgtctggccg
     5281 accacgacct ggacccggcg gcccgcctag ccgacgacgg tgagcgtcgc gccgcagcca
     5341 ttgccgtggt ccgtccccac gtcaagggac tggaccggaa gaatttcgac aaggcgttgg
     5401 ctgccaccgg ctggtgggct caggcccgcg aagccacccg ggatcgggcc attcgcatcg
     5461 gcgcccccac caagcaggtg taccgcgaac tcgtccgtcg ggctgccaag cgtggaggcg
     5521 acccgaatcc ggtgcgagtc gccctgctgg atccactcga cgagctcccc gcctacctgg
     5581 ccgatccggg agcgttcgcc aacctgctag ccgagcgggg cgccctgttc gaccggtatg
     5641 cggcagtcga accgcgcttc ttcatcacca gccaagacga ggtgcccacc atcgaggagc
     5701 tcgaagccga ccaggccgcc cgagccgccg acaccatcgc cgctcccggt gatgtgctca
     5761 ccggtgcatc gggatgccag ggcgtggccc ggggccgggc ccgcatcgtg atggatccgg
     5821 ccgatgccct cgacctcgag ccaggcgaag tgttggtggc ccccatcacc gacccggcgt
     5881 ggactccgct gttcctgccg tcggccgccg tggtggtcga cgtaggggcg ctcatgagcc
     5941 acgcggtaat cgtgtcgcgt gaactgggca tcccgtgcgt ggtgtccgtc gaaggcgcca
     6001 cccgacggat tcctgacggg gcgctggtcg aggtggacgg caccgccgga acggtcaccg
     6061 tgctcgacgg ctaacccgga ccgtcagccg gtgacgccga tcggacagga cacgccggtg
     6121 ccaccaagac cgcagtagcc catggggttc ttggctaggt actgctggtg gtattcctcg
     6181 gcgtagaaga actcggatcg atccacgatc ccggtgacaa tctcgtcgta accagcctcg
     6241 gccagccggg gggcaaagtc attgcgggtg gcctcagcgg tggcccgttg ggtggcgtcg
     6301 gccacgtgga tctcggaccg gtactgagtg cccacgtcgt tgccctgtcg catcaactgg
     6361 gtcggatcgt ggttctccca gaacacccgg agcacactgg ttaggtcgat cgccgcggtc
     6421 tcccacgcca ccagcacgac ctcgttgtgt ccggtgtaac ccgagcagac ctcttcgtag
     6481 gtggggttgg gggtgtggcc gccggcgtaa cccaccgcag tggtccacac gccgggcgtg
     6541 tcccagaaca tgcgctcagc gccccagaag cagcccattc ccacgatgac tgtctcgatg
     6601 ccgtcgacga atgggccgac caggggtcgc ccgttcacga agtgggcggc tgggacggcc
     6661 atgacatcgg gccgaccggg cagcgcgtcg gctggatccg gaatggaaag tggcttgtgt
     6721 ccgaacatgg cgtgatccta ggacgggccc ggatcgactc gaaccagatc cgctccgact
     6781 cccggtcaga tggtgaaggc caggcgggtg gccatttggg ttcccagatc gacgtcgcca
     6841 cccaccgtca cccgaccgtc gtccagtagc ggctgcggat cgatccgacc accggtgagc
     6901 gacaaccagt cgtgtgacga catggccagg gtcaccgtcg gttcgccttc cagctcgtcg
     6961 accaccgccg cccgtccatc gacggccacc cgaatggtgg cctcgaccgg tccggtgagg
     7021 gtcacctcga cccggctccc gtcgggcgct cccgccttct tgccgatgac gaatccggcc
     7081 gcagtactca cctcggccac tgacatctcg gccggccgac cggcagttcc ctgcgggtga
     7141 cccaacggcg cacgacagtc ctcgaggtgg agccacgagt cgtagacccg aacgtgcatg
     7201 aatcgtaggt acggcacctc gcctaccggc gaccagccga ccttcaggat ctcctcgtcg
     7261 ggcatggcgt tcagttgatc gagccgttcg gtcgagatgg tccggaaggc gtccagcacc
     7321 tcggcgcccg acatcgaccg catcgattcc acccactgtt cgttgcccgc cgcgatggcg
     7381 ttcttgaggt gctcggtcgg gaactcgacc tggggagcct gctcgccccg gagcatccgc
     7441 tcggttccga tgatatgggc caggttgtcc tggacggtcc agccaggaca ccggctgggc
     7501 gtggcccagt cgtcggccga caagccctcc gcccagtcga tccactcgtt ccagatttcg
     7561 gcgagtccgc cgagaatgtg gtcgcggtcc aacgtgatgt ccatggaatc tccgttcggg
     7621 ggggtcgttc gtcgagcgtt cgggtctggt cagggcgtga cgttgatcag ggggtcgggt
     7681 tggccacgga ctgccactcc cgggcgtcga ggtagggctt gaacacctcg ccgaccgcgt
     7741 gcaggtcggc tggggtcttg gggcgctgca actcgtagag gtgaggaaac tcaagccatc
     7801 caagcaccag gtcccagagt cgctcggcag cctctccggt cggtggttcg atgaggaccg
     7861 ggccgaacag cttccgggag tcgtcggcat cggcacctgg gaacaccaac gtcgggaccc
     7921 cccaaccacc catgcccagc acacgatcat gatcggcccg gacgtcgtcg tgggtggtct
     7981 catcggccaa cgcggcatcc acgtagccgg gatcgagg
//
LOCUS       DASCMR010000390         1793 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001884807, whole genome shotgun sequence.
ACCESSION   DASCMR010000390 DASCMR010000000
VERSION     DASCMR010000390.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1793)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1793)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1793
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001884807"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            188..1153
                     /locus_tag="QGG16_08965"
     CDS             188..1153
                     /locus_tag="QGG16_08965"
                     /inference="COORDINATES: protein motif:HMM:NF014647.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HJP25446.1"
                     /translation="MPEGGGATTASTASREAGDHVTLIDDFADARCDLIVTIGAEMGE
                     ATTASARRHPDVDFIGIDQHHGEVLPNLAGLVFPEDRAGFLVGVLAASATVSEIVAVV
                     LDSSTDPSSVAYGTGFTNGVAHVDPDVEVLSIVHPDDRGEPDADWGVAAAREALDGGA
                     DVVFGPGSRSGRGVLVEVAGTGYDARNGALCIGAEADDWLQVIKARRCLLTSVMKLPN
                     EFHSMYFSPGRPALIKDYEEALKLPAEYESERSFSTLTLINQEFLLGGTPSGGHVGPV
                     GLHFFNLWGAHKTGVPNRTFGASDDLKSMLADLTRALWTGEVPAS"
     gene            complement(1402..>1793)
                     /locus_tag="QGG16_08970"
     CDS             complement(1402..>1793)
                     /locus_tag="QGG16_08970"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25447.1"
                     /translation="MLARFEDRWRVRAAGADLAGALGMMMGDDPDAGTFLRLLAWSIL
                     SGDADLSTYRRHSAMHELLPLVDEAGGEASGEGPDAETVVAAGMAMIYGWRFFNPFIT
                     RMLDLEGADVERLHTEMGRILRERATG"
BASE COUNT          320 a          632 c          560 g          281 t
ORIGIN      
        1 gacaccaacc accgcggcac caaccaccac cgcggcacca accaccaccg cggcaccaac
       61 ctggacgtct gattcgacct gggacatgtg cctcgtgacc gcccccgccg accgcaggta
      121 cgagtggctc aaccacgaaa cctggatatc cctcgagcgg caacgccggg aaatccagag
      181 gtccctcatg ccggaaggag gtggcgccac caccgcatcc accgcttctc gggaagcggg
      241 cgaccacgtg acacttatcg acgacttcgc cgacgcgcgc tgtgacctca tcgtcaccat
      301 cggagccgaa atgggcgaag cgacgacagc tagcgcccgt cggcatcccg atgtcgactt
      361 catcggcatc gaccagcacc acggcgaggt actcccgaat ctggccgggc tggtcttccc
      421 cgaggatcgt gcagggttcc tcgtcggagt actcgccgcg tcggcgaccg tgtccgagat
      481 cgtcgccgtg gtgttggatt cgagcaccga tccctcgtcg gtcgcctacg gcaccggctt
      541 caccaacggg gttgcccacg ttgaccccga cgtcgaggtc ctctcgatcg tccacccgga
      601 cgacagaggg gaaccggacg ccgactgggg agtagccgcg gcccgtgaag ccctcgatgg
      661 cggcgccgac gtcgtgttcg gacccgggag cagaagcggg cgaggagtgc tggtggaggt
      721 ggccggaacg gggtacgacg cccgaaacgg agcactatgc attggcgcag aggccgacga
      781 ttggctccag gtgatcaagg cccggcggtg cctgctcacc agcgtcatga aactgcccaa
      841 cgaattccac agcatgtact tcagcccggg tcggccggct ctcatcaagg attacgagga
      901 ggcgctgaaa ctgccggccg agtacgagag cgagcgctcc ttttccacgc tgaccctcat
      961 caaccaggag ttcctcctcg gagggacccc atccggaggt cacgtcggac cagtcggcct
     1021 gcacttcttc aacctctggg gcgcccacaa gacgggggtc cctaatcgga cctttggggc
     1081 atccgacgat ctcaagtcga tgctggccga cctcaccagg gccctttgga ccggcgaggt
     1141 cccagcctcg tagggaccgg gcctacacgc tgtttgtcgc cagacgcctg gccttcgtca
     1201 gcagacatgg tgatcgctca ctcgcacgca gcgattggtg agtgtgccga tgccgtcgac
     1261 gtgggtggtg tgcccgggga gttccgggtt ccgggcctgc ggtagggccc acccccacat
     1321 ttgagtgggc gagaaacgat cccgacccgt ccgatacccc acccgccacg ccgggctcgt
     1381 cccggcatga tcgcccctcg gtcacccggt ggcacgctcc cgcaggatcc gtcccatttc
     1441 ggtgtgcagg cgctccacgt cggcaccctc aaggtccagc atccgggtga tgaacgggtt
     1501 gaagaaccgc cagccataga tcatggccat gccggccgcc accacggtct cagcgtcggg
     1561 cccctcacca ctcgcttcgc cccccgcctc gtcgacgagc ggcagcaact cgtgcatggc
     1621 cgagtgtcga cggtaggtcg agaggtcggc gtcccccgac aggatcgacc aggcgagcag
     1681 tcggaggaac gttccggcat cggggtcgtc gcccatcatc attccgagcg ctccggcgag
     1741 gtcggctccc gctgcacgca cccgccaccg atcctcgaac cgggcgagca tgg
//
LOCUS       DASCMR010000391         2067 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001886742, whole genome shotgun sequence.
ACCESSION   DASCMR010000391 DASCMR010000000
VERSION     DASCMR010000391.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2067)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2067)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2067
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001886742"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            67..143
                     /locus_tag="QGG16_08975"
     tRNA            67..143
                     /locus_tag="QGG16_08975"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:101..103,aa:Met,seq:cat)
     gene            283..1752
                     /locus_tag="QGG16_08980"
     CDS             283..1752
                     /locus_tag="QGG16_08980"
                     /inference="COORDINATES: protein motif:HMM:NF020337.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CotH kinase family protein"
                     /protein_id="HJP25448.1"
                     /translation="MFLLTACSSTASIAPSTTTTVVSTHVTAETTTTATETTTTVVST
                     HVTAETTTTATETTTTAGGNVSVLAADDSGYIFDQERLHTFELTLSDEALAQIDRNPS
                     AEEWVLGSLTFEGETIDRVGIRYKGSIGAWVGCLSDPDWSDPSGHKVCTKLSMKVKVN
                     WDDSNREFHGLRRLQFHTMNLDPSQMHERLGYWLFREMGVPAPRSVHARLIVNGTYLG
                     VFALTEQVDGRFTRHNFDDGTGNLYKEVWPLNWDGDTITNDFEFVEALKTNEDENPSI
                     ELIKNFGSEVKAAGPGEAAEVVDRWMDIDEVLAWAVVDRTIRNDDGPFHWYCFDGCRP
                     HNYYWYEDPTAGTLHLIPWDLDNAFQNIVKDSNPVTPVADAWGEITANCLPFGYGDWG
                     LLQRSAACDPLFAAWAMFDDDYGRLLNEFLDGPFAEELVTAQIEAWATQIADATAEAA
                     DIHDDAVSVRKWAGAVKELLAALDHARSIARSPLDGPDA"
     gene            1792..>2067
                     /locus_tag="QGG16_08985"
     CDS             1792..>2067
                     /locus_tag="QGG16_08985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4956 domain-containing protein"
                     /protein_id="HJP25449.1"
                     /translation="MSTPWLIVSDLVAVAVLVFVLYFPRNGRRDMVVALLGINVGLLG
                     IAMTLTRSTVNLGLGLGLFGVLSSIRLRSSELGQQEGAYYFTALALGL"
BASE COUNT          382 a          695 c          613 g          377 t
ORIGIN      
        1 ctatctgaca gttcgctgat cgaccgtcgg gtaggagcga tagtggggcg ccgttaccct
       61 cccctctgcg gggtggagca gtctggtagc tcgtcgggct cataacccga aggtcgcagg
      121 ttcaaatcct gcccccgcca ccaaacgagg aggcccggga tcacaacggt tccgggccct
      181 tctggttctc cggatcgttc gctgaagtgg ctgagtgtca gaagaacagt cacgacctac
      241 ggtgaaccag tgcatctgaa ctcactccgc acagttttgg gcgtgtttct gcttaccgcc
      301 tgctcctcta cggcctccat tgcgcccagc accaccacga cggttgtctc gacgcacgtc
      361 accgccgaaa cgacgaccac cgccacagag accaccacga cggttgtctc gacgcacgtc
      421 accgccgaaa cgacgaccac cgccacagag accaccacca cagccggtgg gaacgtgtcg
      481 gtgctcgctg ccgacgattc cggctacatc ttcgaccagg agcggttgca cacgttcgag
      541 ttgacactgt ccgacgaggc tcttgcccag atcgaccgaa acccgtcggc cgaggagtgg
      601 gtgctgggct cgctcacctt cgagggtgag accatcgacc gggtcggcat ccggtacaag
      661 ggttcgattg gagcatgggt cggctgcctc tccgacccgg actggtcgga cccgtccggc
      721 cacaaggtct gcaccaagct gtcgatgaag gtcaaggtca actgggatga ctcgaaccgg
      781 gagttccacg ggctgcggcg cctgcagttc cacaccatga acctggaccc gtcgcagatg
      841 cacgagcgcc tcggctactg gctatttcgt gaaatgggtg tgccggcccc ccggtcggtc
      901 cacgcccgac tgatcgtcaa cggcacctac ctcggggtgt tcgccctcac cgagcaggtc
      961 gatggccgct tcacccgcca caacttcgac gacggcaccg gcaatctcta caaggaggtg
     1021 tggccgctca actgggacgg cgacaccatt actaacgact ttgaattcgt ggaggcgctc
     1081 aagaccaacg aggacgagaa cccctccatc gagttgatca agaacttcgg ttccgaggtg
     1141 aaggctgctg ggccgggtga ggcggccgag gtggtcgacc ggtggatgga tatcgacgaa
     1201 gtgctggcct gggcggtcgt cgaccgcacc atccgcaacg acgacggccc cttccactgg
     1261 tactgcttcg acgggtgccg cccccacaac tactactggt acgaggaccc gacggccggc
     1321 acgctgcacc tcatcccatg ggacctcgac aatgcctttc agaacatcgt caaggactcc
     1381 aacccggtca ccccggtggc cgacgcctgg ggcgaaatca ccgccaactg ccttccattc
     1441 ggttacgggg attggggttt gctgcagcga tcagcagcct gtgacccgct gttcgccgct
     1501 tgggccatgt tcgacgacga ctacggacgg ctcctcaacg agttcctcga cggaccgttt
     1561 gccgaggaac tcgtgacagc ccagattgaa gcctgggcga cccagatcgc cgacgccacc
     1621 gccgaagccg ccgacatcca cgacgacgcc gtgtcggtac gcaagtgggc cggcgctgtc
     1681 aaagagttgt tggccgccct tgaccatgcc cggtccatcg cccggtcgcc tctagacggc
     1741 cccgacgcct aactttgttg gcgaacgacc ccgaagacag gtgactgccc catgtcaaca
     1801 ccctggctaa tcgtctccga cctggttgcc gtagcggtgt tggtgttcgt cctgtacttc
     1861 ccccgcaacg gccggcgcga catggtggtg gcactgctcg gcatcaacgt cgggttgctc
     1921 ggcatcgcca tgaccctgac acgcagcacg gtgaacctcg gccttgggtt gggcctgttc
     1981 ggcgtgctgt caagcatccg cctgcgctcc tcagaactgg gccagcagga gggcgcctac
     2041 tacttcaccg cccttgccct tggtcta
//
LOCUS       DASCMR010000392         2710 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001890444, whole genome shotgun sequence.
ACCESSION   DASCMR010000392 DASCMR010000000
VERSION     DASCMR010000392.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2710)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2710)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2710
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001890444"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1088)
                     /locus_tag="QGG16_08990"
     CDS             complement(<1..1088)
                     /locus_tag="QGG16_08990"
                     /inference="COORDINATES: protein motif:HMM:NF021355.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-propeller domain-containing protein"
                     /protein_id="HJP25450.1"
                     /translation="MAAHYGVTHPHPAGRLLGAVLAPLMMVLLAGACAQDPEGPGLSG
                     GRTTTTGAVDVSGTELTAGLVAFTACDELLVHLQAEAAQRVGPYGLSGGRYGGPVMLE
                     AVALAEDSMGDGAATFSPRTADETLVEGQDYSGTNVQELGIDEPDLIKTDGRRILVVE
                     DDRLHHVSVAGGTATLTDSLRIKGHWSRQMLLSGDRALLIADTHVDGDPELRPAFSSL
                     VPEGGWRSLTSLIEVDLSDPTDLKIANVLTVEGYHVSTRVVGGSARVVVSTPPDELPF
                     VYPQNSNGEERARRFNREVVAETTLADWMPDFVLESADGTVVEGPLHECTDVSRPTTF
                     AGLSTLSVLTVPLVEPLSRPATTAVLAEG"
     gene            complement(1067..1660)
                     /gene="leuD"
                     /locus_tag="QGG16_08995"
     CDS             complement(1067..1660)
                     /gene="leuD"
                     /locus_tag="QGG16_08995"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HJP25451.1"
                     /translation="MEAVQIVSGTGVPLRRSDVDTDQIIPSDWLKRVERTGFDKGLFS
                     EWRDDRNFVLNDERYSEAAVLVAGPNFGTGSSREHAVWAIQQYGFGAVVSPRFADIFR
                     NNCTKNGLVPVQVSDEVGAALLDAVEADPDLVITVDVAALTLEAPDAGISCSFPLEPS
                     TRERFLEGLDDIGISLRHEADIEGYETTRPAWLPTTA"
     gene            complement(1686..2651)
                     /locus_tag="QGG16_09000"
     CDS             complement(1686..2651)
                     /locus_tag="QGG16_09000"
                     /inference="COORDINATES: protein motif:HMM:NF012550.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitase family protein"
                     /protein_id="HJP25452.1"
                     /translation="MGPAGQVIEGGLVGCDHPGTLAVTVNGELPAGATAKDVILAIVG
                     RLGTGGGIGSVIEYRGDVIRNLSMEGRMTVCNMSIEAGARAGMIAPDQTTFDYLAGRA
                     HAPAGAGWEAAVADWATLATDDDAVFDNEIVLEGSDIVPHVSWGTNPGQVVRLDGSDP
                     DPAHMADAGESESATRALDYMGLTAGTPMRDVAVDTVFIGSCTNGRIEDMRAVAAVAE
                     GRTVKEGVRTLVVPGSGAVKAQAEAEGIPAILTAAGFDWREPGCSMCLAMNPDKLSAG
                     ERCASTSNRNFEGRQGRGGRTHLVSPAVAAATAIAGTFASPADLA"
BASE COUNT          424 a          914 c          942 g          430 t
ORIGIN      
        1 ccctcggcca gcacggcggt cgtggcgggt cgggacagcg gttcgaccag tggaacggtg
       61 agtaccgaca gggtcgagag gccggcgaag gtggtgggac gcgacacgtc ggtgcactcg
      121 tgcagcggcc cctcgaccac cgtcccgtcg gccgactcca ggacgaagtc gggcatccag
      181 tcggccaggg tggtctcggc caccacctcc cggttgaagc ggcgagcccg ctcctcgccg
      241 ttggagttct gcgggtacac gaagggcagt tcgtcgggtg gtgtggagac gaccactcgg
      301 gccgagccgc cgaccacacg ggtggacacg tggtagccct cgacggtgag cacgttggcg
      361 atcttcaggt cggtcggatc cgacaggtcg acctcgataa ggctggtcag cgatcgccat
      421 cccccctcgg gtacgaggct ggagaaggcc ggccgtagtt cgggatcccc gtcgacgtgc
      481 gtatcggcga tgagtagggc ccgatcgccg gacaggagca tctggcggct ccagtggccc
      541 ttgatgcgaa gggagtcggt caatgtcgca gtgccgcctg ccaccgatac gtggtggagt
      601 cgatcgtcct cgacgaccag gatccgacgg ccgtcggtct tgatgaggtc aggttcgtcg
      661 atgcccagtt cctgaacgtt ggtacccgag tagtcctgcc cttcgacgag agtctcgtcg
      721 gcggtccggg ggctgaacgt cgcggccccg tcacccatcg agtcttcggc cagggccacc
      781 gcctccagca tcaccgggcc gccgtaccgg cccccactca ggccgtaggg gccgacccgt
      841 tgcgcggcct cggcctgcag atggaccagc aactcgtcac acgccgtgaa ggcaacgagg
      901 ccggccgtca actcggtgcc cgacacgtcg accgccccgg tggttgtggt gcggccgccg
      961 gaaaggccgg gaccttcggg gtcctgtgca cacgcgccgg ccagcagcac catcatcagg
     1021 ggggccagga cggcgcctag gaggcgcccc gcggggtgtg ggtgggtcac gccgtagtgg
     1081 gcagccatgc cgggcgagtg gtctcgtagc cctcgatgtc ggcttcgtgg cgcagagaga
     1141 tgccgatgtc atcgagtccc tcgaggaacc gctcccgggt ggagggttcc agcggaaacg
     1201 agcacgagat cccggcatcc ggtgcttcaa gcgtcagagc ggccacgtcc acggtgatga
     1261 ccagatcggg gtcggcctcc acggcgtcga gtagggcggc gcccacctca tcggacacct
     1321 ggaccggcac caggccgttc ttggtgcagt tgttgcggaa gatgtcggcg aaccggggtg
     1381 agaccacggc accgaatccg tactgttgga tggcccacac ggcgtgctcg cgtgacgagc
     1441 ccgtcccaaa gttggggccg gccaccagaa cggcggcctc ggagtagcgc tcgtcgttca
     1501 acacgaagtt ccggtcgtcg cgccattcgg agaacaggcc cttgtcgaaa ccggtgcgtt
     1561 ccacccgctt gagccagtcg ctggggatga tctggtcggt atccacatcg gagcgacgca
     1621 gtggcacccc ggtacccgag acgatctgta cagcttccat ggtcgtgctc ccttcttgtt
     1681 ccgggtcagg ccaggtcggc cggcgaggcg aacgtgccgg cgatggcggt ggccgcggcg
     1741 acggccggcg agaccagatg ggtgcgaccg ccccggccct ggcggccctc gaagttgcgg
     1801 ttgctggtgc tggcacagcg ttcacctgcc gacagcttgt cggggttcat ggcaagacac
     1861 atcgaacagc cgggctcacg ccagtcgaag ccggctgcgg tgaggatggc ggggatgccc
     1921 tcggcctcgg cctgcgcctt gactgcacct gaacccggaa cgacgagcgt gcgtacaccc
     1981 tccttaacgg tgcggccctc ggcgacggct gccacggccc gcatgtcctc gattcggccg
     2041 ttggtgcatg acccgatgaa cacggtgtca actgccacgt cacgcatcgg ggtgccggcg
     2101 gtcagcccca tgtagtccag tgcccgggtg gccgactcgc tctcaccggc atcggccata
     2161 tgggccgggt ccggatccga accgtcgagg cggacgacct ggcctgggtt cgtgccccac
     2221 gaaacgtgcg ggactatgtc ggaaccctcc agcacgatct cgttatcgaa cacggcgtca
     2281 tcatcggtgg ccagcgtggc ccagtcggcc acggccgcct cccagccggc gcccgccgga
     2341 gcgtgggccc gaccggccag gtagtcgaac gtggtctggt cgggggcgat catgccggcc
     2401 cgtgcaccgg cctcgatcga catgttgcag accgtcatgc ggccctccat ggacaggttg
     2461 cggatcacgt cgcccctgta ctcgatcacc gacccgatgc cgccacccgt cccgagccgt
     2521 cccacgatcg ccaggatcac gtcctttgcg gtcgcaccgg ccggcagctc gccgttgacg
     2581 gtcaccgcca gggtgccggg atgatcgcac ccgaccagac caccttcgat tacctggccg
     2641 gccgggccca cgctccagcg ggcgccgact gggaggtagc cgtggccgac tgggcagcgc
     2701 tggccaccga
//
LOCUS       DASCMR010000393         2707 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001900047, whole genome shotgun sequence.
ACCESSION   DASCMR010000393 DASCMR010000000
VERSION     DASCMR010000393.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2707)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2707)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2707
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001900047"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..884
                     /locus_tag="QGG16_09005"
     CDS             <1..884
                     /locus_tag="QGG16_09005"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJP25453.1"
                     /translation="NMAARFASADLAEEPGSAIGMLIWASTFGSVLGPLLGFGPLRSL
                     ATLVGLHELAGPYLLSVLLFGIAALAVHLFLRPDPLVVAGGLGNVEVREPLRSFLRPI
                     VGSPDGRLAVGSMVVGHVVMVGIMTMMPLHMRSGGHGLQLIGAMISLHIVGMYAFSPI
                     VGRLVDRLGPHRLIVVGSLLLAVGADVAAHDEAHQSLGAFVGMFIVGIGWSFGLIASS
                     ALLVRTFDGPNRVGIQGLADMCMTTGGASAGIVAGLVLEVSTFPVLGHGAAVVGALPA
                     VAVLIRWWSKRRMASAL"
     gene            881..2086
                     /locus_tag="QGG16_09010"
     CDS             881..2086
                     /locus_tag="QGG16_09010"
                     /inference="COORDINATES: protein motif:HMM:NF014564.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HJP25454.1"
                     /translation="MSGPLDGFRILDLSQIVSGPFGTMLLSDQGADVIKVEPVVGQDV
                     TRRQNFARGGLSAFYINGNRGKRSMSLDLSRDEGRRILLDLAAEVDVFIQNFRPGACD
                     RLGVGYDDVRAVNPDIVYVSISGYGPDGPYSGRPVLDPVIQGLTGMVSHQVNPDIPFP
                     DLVRNIVSDKATALTVAQACTAALLARERGSGGQHVVIPMLDATLAFFWNDGMVAHTM
                     KGDGVSPGKTLAEVYRLTDCIDGKIIYFSASTAHIHGVCRAVGHPEWCDDPRYSLEGF
                     VRDQQNLVDFGVMTAEAFASITMADALAGLLEADVPSGPILEKEEVLNHPQVVHNGAI
                     ATWEHPSAGTVRSARPGARFSETPIEMRLSASHKGADNREVLRSIGRTDVEIDGLLAD
                     GVIGEPDLF"
     gene            2156..2575
                     /locus_tag="QGG16_09015"
     CDS             2156..2575
                     /locus_tag="QGG16_09015"
                     /inference="COORDINATES: protein motif:HMM:TIGR03618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PPOX class F420-dependent oxidoreductase"
                     /protein_id="HJP25455.1"
                     /translation="MDTSPSIADIPASHVDLFDLPAIWHIATIGPNGEPQVSPVWATF
                     DGTHVRFPHAEGRQKWRNLCADDRIALSATDPDNNERYLEVRGRVVGWERDGALSLLD
                     AMAKKYRDEDEFPREHAVPLDKRCTAVVEPLHCTTMG"
BASE COUNT          480 a          814 c          851 g          562 t
ORIGIN      
        1 cgaatatggc agctcggttc gcgtcagccg atcttgcgga ggagccggga tcagccattg
       61 gaatgttgat ctgggcttcg actttcggat cggtccttgg tccactgctg ggatttggcc
      121 cgctccgctc cttagccact ctggtgggtc tccacgagtt agccggtccc tacctgttgt
      181 cagttcttct gtttggcatc gccgccctgg ccgttcacct attcctgagg cccgacccgc
      241 tggtggtcgc cgggggtctc gggaacgtcg aggtacgtga accgctgcga tccttcctcc
      301 gtccgatcgt gggatcaccg gatggacgac tagcggtggg ctcgatggtc gtggggcacg
      361 tggtgatggt cggaatcatg acgatgatgc cgcttcacat gcgttccggt ggccatggac
      421 tccagctcat cggcgccatg atctcgctgc acatcgtcgg gatgtacgca ttttcaccaa
      481 tagtcgggag gcttgtcgat cgactggggc cgcacaggct gattgtcgtc gggagcctcc
      541 tactggccgt tggtgccgat gtggccgccc acgacgaagc ccaccagtcc cttggtgcct
      601 tcgtggggat gttcatcgtt ggcattggat ggagctttgg actcattgcc tcttcggcat
      661 tgctggtccg gaccttcgac ggcccgaatc gagtcgggat tcagggactg gctgacatgt
      721 gcatgactac cggtggagct tcagcaggca tcgtcgcagg tttggtcttg gaggtatcga
      781 cctttcctgt gctgggacac ggggccgcag tggttggggc gctacctgcc gtagcagttc
      841 tgatccgttg gtggtccaaa cggcgaatgg caagtgcact atgagcggcc cccttgacgg
      901 gttccgcatc ttggatctca gtcagatcgt cagcggaccg ttcgggacga tgctcctttc
      961 cgaccaggga gcggacgtga tcaaggttga accggtggtg ggccaggacg tgacccgtcg
     1021 acagaacttc gcccgcggcg gtctctcggc cttctacatc aatggcaacc gtggcaagcg
     1081 ctcgatgtcg ctggatctaa gtcgagacga aggtcgaagg atcctcctag acctcgctgc
     1141 cgaggttgat gtcttcattc aaaacttccg accgggagcg tgcgatcgac tgggtgtcgg
     1201 ctatgacgac gtccgggcag tgaatcccga catcgtttac gtgtcaatca gtggttacgg
     1261 tcccgatggg ccctactcgg ggcgaccggt ccttgatccg gttatccagg gtctgaccgg
     1321 aatggtgtcc caccaggtga acccggatat cccgttcccc gatttagtcc gcaatatcgt
     1381 gtctgataag gccaccgctc tgaccgtggc gcaggcctgc accgctgctc tcctggccag
     1441 agaacggggt tccggtggcc aacacgtggt catcccaatg ctggacgcca cacttgcgtt
     1501 cttctggaac gacgggatgg tggcccacac catgaaggga gacggcgtat cgccgggcaa
     1561 gacgctggcc gaggtctacc gcttgactga ctgcatcgac ggaaagatca tctacttctc
     1621 ggcctcgacg gcgcacatcc atggggtgtg tcgggctgtc ggacatcctg aatggtgtga
     1681 cgatccccgc tacagcctcg agggcttcgt ccgtgaccag cagaaccttg tcgacttcgg
     1741 tgtgatgacc gccgaagcgt ttgcatccat caccatggct gacgctctgg ccgggctatt
     1801 ggaggcggat gtcccgagtg gtccgatcct cgaaaaggaa gaggtgttga accatccgca
     1861 ggtagtgcac aacggggcga tcgccacgtg ggaacatccc tccgccggca cggtccggag
     1921 cgcccgtccg ggggcccggt tctccgaaac gcccatcgag atgcgcctgt cggcatccca
     1981 taagggggca gataaccgtg aggttctacg cagcatcggc cggaccgatg tcgagatcga
     2041 cgggttgcta gccgatggtg tgatcggcga accggacctg ttctagaacg acggaggctc
     2101 cgggtgagcc ctggcgaagg ccatgggaat catcccgtgg ggctagcgtc cgtccatgga
     2161 cacctccccc tcaatcgccg atatccccgc ttcacacgtc gacctgttcg acctgccagc
     2221 tatctggcat atcgcaacca tcggccccaa tggcgaacct caggtctcac cggtgtgggc
     2281 cactttcgac ggcacccatg tccgcttccc ccacgctgag ggccgtcaga aatggcgcaa
     2341 tctctgcgcc gacgaccgca ttgccttgtc ggccaccgat cccgacaaca acgagcggta
     2401 ccttgaggtc cgtggtcgcg tagtcgggtg ggaacgcgac ggcgccctga gcctgctgga
     2461 cgccatggcg aagaagtacc gggacgagga cgagttcccc cgcgagcatg ccgtaccgct
     2521 ggataagcgg tgcaccgcag tggtcgaacc actgcactgc acaactatgg gatgaatcga
     2581 taagcggcat gccgacggac aatgactgac tgaccagcac caggaaccga tacctggtgc
     2641 accctcggtg cgtcggcctc gtaatcggtt catcggcgct agaggcatac gtggagtcgc
     2701 ccagaag
//
LOCUS       DASCMR010000394         2044 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001905977, whole genome shotgun sequence.
ACCESSION   DASCMR010000394 DASCMR010000000
VERSION     DASCMR010000394.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2044)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2044)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2044
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001905977"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..751)
                     /locus_tag="QGG16_09020"
     CDS             complement(<1..751)
                     /locus_tag="QGG16_09020"
                     /inference="COORDINATES: protein motif:HMM:NF015251.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25456.1"
                     /translation="MTRGIVNAFRLASVVARVVPPAISLPVARMVGRIAGYLDRDRRR
                     LVERNLRRVRGPELTGRQLRRSVDLVFASYADYYLQSFRLPSMSAEEIVSGFTEEGYE
                     RIAEGLEAGNGVIMAMPHLGSWEWAAHWLTLHHGVPVGCVVESLEPPELFDWYRSFRA
                     SLGMKVVGLGPGAGTETMAMLRENRAVCLPSDRHVGGSGVAVEFFGEVTMLPAGPATL
                     ALRTGAVLLPIAIYDHPGGCHGVVRPPVAAQR"
     gene            complement(774..1454)
                     /locus_tag="QGG16_09025"
     CDS             complement(774..1454)
                     /locus_tag="QGG16_09025"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF013250.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HJP25457.1"
                     /translation="MLDGSWRTVVDRGLTPIGQSLQRAGISADVVTVVGILMASGASV
                     AIGMGNLRLGFMLLVLTGVPDALDGAVAKAAGTASSRGAYFDSVADRLTDALLFGGVA
                     WHLATVRTDRMMMLPVAIMATAMFISYQRAKAESLGYDAKGGLMERAERFIVLAFGLL
                     FFEILVPVLWVMLALSLVTAVQRFVKVWRQATADRELPAGGWPGRRRQLRMERRRRHG
                     APTRPNRH"
     gene            complement(1584..>2044)
                     /locus_tag="QGG16_09030"
     CDS             complement(1584..>2044)
                     /locus_tag="QGG16_09030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25458.1"
                     /translation="LPDDLDARGAGLVGPYVFPDNDRRRIPGFIYLVLAAVTVCVATL
                     AEGSPLVDGGLVAGAIGLALVGLYHLQAGWSLKIDEADALVAAVRAVGFPVGHASAQM
                     AWRGLRSRPTWRVLVYSNESPPERRGLVFVDGIDGEMVAAHVEDNPEDWS"
BASE COUNT          377 a          703 c          687 g          277 t
ORIGIN      
        1 cgcgttgggc cgctaccggt gggcgaacca cgccgtggca gccgcccggg tggtcgtaga
       61 tggcaatggg caacaggacg gccccggtgc gcagcgccag ggtggccgga ccggcgggca
      121 gcatcgtgac ctcgccgaag aactcgaccg ccacgcccga gccaccgaca tgccggtcac
      181 tgggcaggca caccgcccgg ttctcgcgga gcatggccat ggtctcggtg ccggcacccg
      241 ggccgaggcc caccaccttc atcccaaggg acgcccggaa gctccggtac cagtcgaaga
      301 gttccggcgg ctcgagcgac tcgaccacgc accccacggg aacgccgtgg tggagggtca
      361 accagtgggc agcccactcc cagctaccga ggtgtggcat ggccatgatg acgccgttac
      421 cggcctcgag cccctcggcg atccgctcgt agccctcctc ggtgaagccg gacacaatct
      481 cctcggcgct cattgacggc agccggaaac tctggaggta gtagtcggcg tacgaggcga
      541 acaccaggtc cactgatcgc cgcagttggc ggccggtcag ttccggccca cgaacccgac
      601 gcaggttgcg ttcaacgagt cgacgacggt ccctgtcgag gtagccggcg atacgaccca
      661 ccatccgggc aacgggcaac gagatcgccg gagggaccac gcgcgcgacc accgaagcaa
      721 gtcggaaggc attgacgatt ccccgggtca tgagcaaccg gaaggtggag gcgtcagtgg
      781 cgattcggcc gagtgggggc gccgtgacgt cgacgacgct ccatccgcag ctgccggcgc
      841 cggccgggcc aaccgcctgc cgggagttcc cggtctgcgg tggcctgacg ccacaccttc
      901 acgaaccgct gcaccgcggt aaccaggctg agcgccagca tcacccagag cacgggaacg
      961 aggatctcga agaagagcag accgaaggcc aggacgatga accgctcggc gcgctccatg
     1021 agcccgccct tggcgtcgta gcccagcgac tcggccttgg ctcgctggta ggagatgaac
     1081 atggccgtgg ccatgatggc caccggcaac atcatcatcc ggtcggtgcg aacggtggcc
     1141 agatgccacg ccacgccacc gaagaggagg gcgtcggtga gccggtcggc cacggaatcg
     1201 aagtaggcgc cgcgggatga cgccgttcct gcggccttgg ccactgcccc atcgagtgca
     1261 tcgggcaccc cggtcagcac cagcagcatg aatccgagac gcaagttgcc catgccaatg
     1321 gccaccgagg ccccggacgc catgaggatg ccgacgaccg tgacgacgtc cgctgagatc
     1381 ccggcccgtt gcaggctctg accaatgggc gtgagaccgc gatccaccac ggtgcgccaa
     1441 ctgccgtcca gcatgatggt tgctcctgtt ggacccggcg ggtcccagac ctcgagaggt
     1501 taccggagtc acggtcgacc ctcggggtac cggcgggctt ccgggcatga cggatcggcc
     1561 accacgtcag gttcggtgcc gggtcaggac cagtcttcgg gattgtcctc gacgtgggcg
     1621 gcaaccatct cgccgtcgat gccgtcgacg aataccaggc cgcgacgttc gggcggcgat
     1681 tcgttcgaat acacgagaac ccgccacgtt ggacgactcc gtaggccgcg ccaggccatc
     1741 tgggccgatg cgtgaccaac ggggaagccc acggcccgta cggccgccac cagcgcgtca
     1801 gcctcgtcga tcttgaggct ccagccggcc tgcaggtggt acaggcccac cagggcgagg
     1861 ccaatggctc cggcgaccag tcctccatcg accagcggcg agccttcagc cagcgtggca
     1921 acacaaacgg tgaccgcggc caacaccagg tagatgaacc cggggatccg tcgccggtcg
     1981 ttgtcgggga atacgtaggg cccgaccagc ccggcaccac gtgcgtctag gtcgtcggga
     2041 agtg
//
LOCUS       DASCMR010000395         1615 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001924171, whole genome shotgun sequence.
ACCESSION   DASCMR010000395 DASCMR010000000
VERSION     DASCMR010000395.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1615)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1615)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1615
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001924171"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..281
                     /locus_tag="QGG16_09035"
     CDS             <1..281
                     /locus_tag="QGG16_09035"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25459.1"
                     /translation="PYAVTLGCRATEAGFFRGGDTLRRINATGEDDQAEPGLLRRWDG
                     VAWPSASERSFVLTALPSSSREFSPFPGIDLLDVYRFLDRQGGTATTS"
     gene            complement(283..1131)
                     /locus_tag="QGG16_09040"
     CDS             complement(283..1131)
                     /locus_tag="QGG16_09040"
                     /inference="COORDINATES: protein motif:HMM:NF012376.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase"
                     /protein_id="HJP25460.1"
                     /translation="MLIAQISDCHIRDHEGWFGRLVDTTETLGLVVEHLLALEPAPDV
                     ILATGDLTDDGTPAQYAILRDVLAPIAERIVPLPGNHDEGPFFRLAFADLLPADTAVD
                     HCSYVVDRHPVRLVGLDTSLPGRHDGLFDADREAWLEEALSADDRPTLVFTHFPPFDT
                     GLVFMDQAGVSNADRLRATIERHPHVRLLVTGHLHRPIQTNIGSTLVSTCPSTGNQIN
                     LDLHPDRAAAIDEPPAFQLHRWDGERFVTHTGTVRDPTVVRTVDLGRHAAEVRRRHEA
                     GEPFTK"
     gene            complement(1151..1222)
                     /locus_tag="QGG16_09045"
     tRNA            complement(1151..1222)
                     /locus_tag="QGG16_09045"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1187..1189),aa:Gly,seq:tcc)
     gene            1312..>1615
                     /locus_tag="QGG16_09050"
     CDS             1312..>1615
                     /locus_tag="QGG16_09050"
                     /inference="COORDINATES: protein motif:HMM:NF012398.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HJP25461.1"
                     /translation="MTSSDASPNVVPNGAHLIGGDWSTHAPGGTAVSDNPARPDQPVG
                     EYPLGDVSTAADAVTSAVDAQATWTALGFGARARILERAAVLFDERADDLALVATLE"
BASE COUNT          278 a          508 c          562 g          267 t
ORIGIN      
        1 ccccgtacgc ggtgaccctc gggtgccggg cgaccgaagc cggtttcttc cggggaggtg
       61 acacgctccg gcggatcaac gcgaccggcg aggacgacca ggccgaaccc ggtctgctgc
      121 ggcgttggga tggcgtggcc tggccatcgg cctcggaacg cagtttcgtg ttgacggccc
      181 taccttcttc atccagggaa ttctcgccgt tcccgggcat cgacctgctc gacgtctacc
      241 ggttcctcga tcgccagggc ggcaccgcta caacttcctg aactacttgg tgaacggttc
      301 gccggcctcg tgtcgacgac ggacctccgc cgcgtgccgc ccgaggtcga cggtccggac
      361 cacggtggga tcgcggaccg ttcccgtgtg ggtgacgaag cgttcaccgt cccaccggtg
      421 gagttggaaa gccggcggtt cgtcaatggc cgctgcccgg tcaggatgca ggtcgaggtt
      481 gatctggttt ccggtggacg ggcaggtcga gacaagggtc gacccgatgt tcgtctggat
      541 aggacggtgg aggtgcccag tcaccaggag gcgaacgtgc gggtgacgct cgatggtggc
      601 acggaggcga tcggcattgg agacgccggc ctggtccatg aacaccagtc ccgtatcgaa
      661 cggcgggaag tgggtgaaca cgagggtggg tcgatcgtcg gccgacagcg cctcctcaag
      721 ccaggcctcc cggtcggcgt cgaacaggcc gtcgtggcga ccgggcaagc tcgtgtccaa
      781 cccgacgagc cgtaccgggt gccggtcgac cacgtaactg cagtggtcga cagccgtgtc
      841 agcgggaagc aggtcggcga aggccagacg gaagaaaggc ccctcgtcgt gattgccggg
      901 gagcgggacg atccgttcgg cgatgggagc caacacatca cggaggatgg cgtactgggc
      961 tggcgtaccg tcatcggtca ggtcaccggt ggccaggatc acatcgggtg caggttcgag
     1021 ggccaacagg tgttcgacca ccaggccgag tgtctcggta gtgtcgacga gccggccaaa
     1081 ccaaccctcg tggtcccgaa tgtggcagtc cgatatctgg gcaatcagca cgacacgagg
     1141 ctacgggacg agcgggtgga gggaatcgaa ccctcatctt cagtttggaa aactgaggtt
     1201 ctaaccgttg aactacaccc gcggaccgcc gtggcggacc cggtgaacct atcggcctcc
     1261 gctccggccc gtccgtcctt aggtccggac ggggtatgta cgcttccggc catgaccagc
     1321 agcgacgctt ctcccaacgt ggttccgaac ggcgctcacc tgatcggcgg cgactggagc
     1381 acacatgctc caggcggcac agcggttagc gacaaccccg cacggcccga ccaaccggtg
     1441 ggtgaatacc ccctcggcga tgtctcgacg gcggccgatg ccgtcacctc ggcggtcgat
     1501 gcccaggcaa cgtggacagc cctcggcttc ggtgcccggg cgaggatcct ggaacgcgct
     1561 gccgtgctgt tcgacgagcg ggccgacgac ctggcgttgg tggcaaccct tgagg
//
LOCUS       DASCMR010000396         2859 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001924570, whole genome shotgun sequence.
ACCESSION   DASCMR010000396 DASCMR010000000
VERSION     DASCMR010000396.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2859)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2859)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2859
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001924570"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..385
                     /locus_tag="QGG16_09055"
     CDS             <1..385
                     /locus_tag="QGG16_09055"
                     /inference="COORDINATES: protein motif:HMM:NF013245.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP25462.1"
                     /translation="NAPTARWLLLPVLFALQSLFSLGASFAAARFNHLYRDLENLLPF
                     VFRLLFYVSGVLYSVDHYVDDAFLRGLFALNPMYVYVTAWRWVMVGGPATVVEATAAV
                     SWALVALVAGFAVFRAGEQTYGRTG"
     gene            418..1098
                     /locus_tag="QGG16_09060"
     CDS             418..1098
                     /locus_tag="QGG16_09060"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJP25463.1"
                     /translation="MTYTIRSHRPLIRDLLRGQRPAAQQVHAVRGVTFDVHVGESVGV
                     VGPNGSGKTTLLQATTGLLAVSAGEILVRSVPAFLGVQAVLRNQLTGRRNIEVGLLAQ
                     GLERAAVDDLVPAVVEFTGLGDAIDMRMETYSSGMRARLHFSVATATSPEILLIDEAL
                     AVGDRAFREKSARRLDEHRAGSGTVLLVSHDLGEIRRSCDRVIWLQGGRIVADGPTGE
                     VLAAYEAS"
     gene            complement(1083..2090)
                     /locus_tag="QGG16_09065"
     CDS             complement(1083..2090)
                     /locus_tag="QGG16_09065"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HJP25464.1"
                     /translation="MPGEETGSPVPDVAVVLPVRDGAATLGDAVTSVLAQEFTGTIEV
                     CIAAAPSADRTREVADGLAAADPRVTVVDNPAGVTPAGLNAAIRATSAPVVVRVDGHA
                     ELSPGYVARAVETLERTGAVNVGGIQDPRGTTPLEVAVGRAMASGFGAGDARYRRGGP
                     EGPVDTVYLGVFRRVALEAVGSFDESLVRNQDYELNWRLREAGGKVWFDPALRVAYRP
                     RGSVAGLARQFFGYGRWKRVVLRRHPRSLRWRQLAAPAATVGVAVGLVGGLWWLPTLI
                     LPAGYLAVVAGASLVVGDRPGTMARLLVAFPTMHLAWGAGFLIGPPRSAGRNRSVQDA
                     S"
     gene            complement(2120..>2859)
                     /locus_tag="QGG16_09070"
     CDS             complement(2120..>2859)
                     /locus_tag="QGG16_09070"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: protein motif:HMM:NF014453.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0006486 - protein glycosylation [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="sugar transferase"
                     /protein_id="HJP25465.1"
                     /translation="VSLGDVMPEPLAALDRSGRGVYLRVTATTALLGLRDVREIGGMP
                     YVAIRARALRTHQVRLKRLVELVVLLAAVPVVVPVVALLATYVRLVAGGGVLYRQVRT
                     GRHGEPFTMAKFRTMHHDAEADGTARLAVADDARVVRGCRWLRRTRLDELPQLWHVVQ
                     GRMSLVGPRPERPERILEFEAALPGYGRRHEIAPGITGLAQVRAGYHTDPAYKLGHDL
                     QYLVSWSPVLDLQILARTVLVLFRPGS"
BASE COUNT          426 a         1049 c          987 g          397 t
ORIGIN      
        1 caacgcaccg accgcccgct ggctgctcct gcccgtgctg ttcgccctgc agtccctgtt
       61 cagcttgggt gccagcttcg ccgccgcccg gttcaaccac ctgtaccgcg acctcgagaa
      121 cctgctgccg ttcgtcttcc gcctgctgtt ctacgtgtcg ggcgtcctct actcggtcga
      181 ccactacgtg gacgacgcct ttctgcgggg cctgttcgcc ctcaacccga tgtacgtcta
      241 cgtgacggcc tggcggtggg tcatggtcgg cggaccggcc accgtggtgg aggcaacggc
      301 cgccgtgtcc tgggcactgg tggcgctggt ggccgggttc gccgtgttcc gggccggcga
      361 acagacctac gggcggaccg gatgacggcg taggcgctgc gctgcgtggg cgccgaggtg
      421 acttacacca tccggtcgca ccgccccctc atccgcgacc tgctccgtgg acaacgtccg
      481 gctgcccagc aggtgcacgc cgtgcggggc gtaacgttcg acgtccacgt gggcgagagc
      541 gtgggcgtgg tcggccccaa cggctcgggc aagaccaccc ttctgcaggc caccaccggc
      601 ctcctggccg tgtcagccgg cgagatcctg gtcaggtcgg ttccggcctt cctgggtgta
      661 caggccgtgc tgcgcaacca gttgacgggt cgacgaaaca tcgaggtcgg cctgctggct
      721 cagggtttgg aacgggccgc cgtcgacgac ctggttccgg cggttgtcga gttcaccggg
      781 ctgggtgacg ccatcgacat gcggatggag acctactcgt cgggcatgcg ggcccgactg
      841 cacttctcgg tggccactgc cacctcgccg gagatcctgc tcatcgacga ggcactggcc
      901 gtcggcgacc gggcgtttcg cgagaagagc gcccggcgac tcgacgagca tcgggcgggt
      961 tctggaacgg tgctgctggt cagccacgac ctgggagaga tccgacgatc ctgtgaccgg
     1021 gtgatctggc tgcagggcgg ccgaatcgtg gccgacgggc cgaccggtga ggtactggct
     1081 gcctacgagg cgtcctgaac cgaccggttg cgtcccgccg agcggggcgg cccgatgagg
     1141 aaccccgcgc cccacgccag gtgcatggtc ggaaaggcca ccaggaggcg ggccatggtg
     1201 cccggacggt cgccgaccac cagcgacgcc cccgccacga cagccaggta gccggcaggc
     1261 agaatcagag ttggcagcca ccacagtccg ccgaccaggc ccaccgccac gccgaccgtg
     1321 gctgccggag cggccaactg ccgccaccgg agcgacctcg ggtgacggcg cagcaccacc
     1381 cgcttccagc gtccgtagcc gaagaactgg cgggccagtc cggcaaccga gccgcggggc
     1441 cggtaggcca cccgtagcgc cgggtcgaac cacaccttcc ccccggcttc acggagtcgc
     1501 cagttcaact cgtagtcctg gttgcgaacc agcgattcgt cgaacgaccc gaccgcctcg
     1561 agggcaacgc gccggaacac cccgaggtac acggtgtcaa cgggcccctc ggggccgccg
     1621 cggcggtagc gggcgtcgcc ggcaccgaag cccgacgcca tggcccggcc caccgccacc
     1681 tccagtggcg tggtcccccg ggggtcctgg atgcccccca cgttgacggc ccccgtccgc
     1741 tccagcgtct cgacagcccg ggccacgtag cccggcgaca gttcagcgtg gccgtcgacc
     1801 cggaccacca ccggcgccga ggtggcccgg atggcggcgt tcagtccggc cggcgtgacg
     1861 cccgccgggt tgtccaccac cgtcacccgc gggtcggcgg cggccagtcc gtcggccacc
     1921 tcgcgtgtcc ggtcggccga cggtgccgca gcgatgcaga cctcgatcgt tccggtgaac
     1981 tcctgggcca gcaccgacgt cacggcgtca cccagcgtgg ccgccccgtc ccgtaccggc
     2041 agcacgacgg ccacgtcggg caccggagaa ccagtttcct caccgggcat cggctggtcc
     2101 gacattggca ggtcggccct cagctgcccg gtcggaacag caccagcacc gtccgggcca
     2161 ggatctggag gtccagcacc ggcgaccacg agaccaggta ctggaggtcg tggcccagtt
     2221 tgtaggccgg atcggtgtgg tagccggccc gcacctgggc cagaccggtg atgcccgggg
     2281 cgatctcgtg gcgccggccg tagcccggca gagccgcctc gaactcgagg atccgctcgg
     2341 gtcgttcggg ccggggtccg acgagggaca tgcggccctg caccacgtgc cacagctgag
     2401 gtagctcgtc gagccgggtc cgacgcagcc agcggcaacc gcgcaccaca cgggcgtcgt
     2461 ccgctacagc caggcgggcc gtgccatcgg cctcggcgtc atggtgcatg gtgcggaact
     2521 tggccatcgt gaacggctcc ccgtggcgcc ccgtccgcac ctggcggtac agcaccccgc
     2581 cgccggccac caggcgaacg taggtggcga gaagggccac caccggcacc accaccggga
     2641 cggccgccag cagcacgacc agttccacca ggcgcttgag gcgcacctgg tgggtgcgaa
     2701 gagcccgggc acggatggcc acgtacggca taccgccgat ctcgcgcacg tcacgtaggc
     2761 caagcagggc ggtggtcgcc gtgacccgca ggtacacgcc ccgacccgaa cggtcgagcg
     2821 cggcgagcgg ctcgggcatc acgtcaccca gggacacat
//
LOCUS       DASCMR010000397         9666 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001924629, whole genome shotgun sequence.
ACCESSION   DASCMR010000397 DASCMR010000000
VERSION     DASCMR010000397.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 9666)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9666)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9666
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001924629"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..277)
                     /locus_tag="QGG16_09075"
     CDS             complement(<1..277)
                     /locus_tag="QGG16_09075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020808074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25466.1"
                     /translation="MLDVNEFDQLRIGLATADGIRMWSNGEVKKPETINYRTLKPEKD
                     GLFCEKIFGPTKDWECYCGKYKRVRFKGIICERCGVEVTRSKVRRDRM"
     gene            complement(346..3969)
                     /locus_tag="QGG16_09080"
     CDS             complement(346..3969)
                     /locus_tag="QGG16_09080"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_function: GO:0032549 - ribonucleoside binding [Evidence
                     IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HJP25467.1"
                     /translation="MSSARPLVRDRYSFGNLEEVLPLPHLIDIQRKSFEWFSAEGVAD
                     TFRDLSPITDFSETLSLELEFDPTDEDLCPPPKFTIEECKERDMTFSAPIFVRAAFKN
                     ENTGEIKEQTVFMGDFPRMTEKGTFVINGTERVVVSQLVRSPGVIFQPGDRYRLRNMS
                     KHQLVTGTIHPYRGEWIEFDVEHKPGKHVTAGTRVARKRRISMFTLLRALGYDEENEP
                     GFLDRFVRYFDYLEGQWEKDQLPEGWQDAVEAGERKSPQEEALLEIYKRVRPGEPPSV
                     EAARAYLRNAFFESRRYDLSRVGRYKLNRKLGPEIEKIEEIFGLELERPDPDSPVLTR
                     SEVLATCTYLLHLAKGEPGYRLDDQDHFANRRIRSVGELIQNQLRIGLSRMERVVRER
                     MTTMDVEAIAPQNLVNIRPVVAAIKEFFGTSQLSQFMDQVNPLSGLTHRRRLSALGPG
                     GLSRERAGFEVRDVHFSHYGRMCPIETPEGPNIGLIGGLATYGRVNPFGFIESPYRKV
                     IDGRVTDEIVYMAADDEEEYVVAQANAPLNDDGTFRNDRVLVRRSPQAASLNDLKLQL
                     EQDVFFGATTEISYVPGTEVQLMDVSPKQIVSVATALIPFLEHDDANRALMGANMQRQ
                     AVPLVRAEAPYIGTGIEASAAHDAADMLLANEAGTVMAIDGVSVTMNYAKTGTVTHQL
                     LKYVRSNQDTCVNQKIRVTPGQKVKAGQLLADGPSTDGGELALGKNLLVAFMSWEGYN
                     FEDAIILSERLVKDDVLTSIHIHEHTIDARDTKLGAEEITGDIPNLSDEILADLDELG
                     IVRVGAEVSPGDVLVGKVTPKGETELTPEERLLRAIFGEKSREVRDTSLKVPHGETGK
                     VIDVRVQSRDDGDELPPGINQLVRVYVAQKRKISVGDKLAGRHGNKGVISKILPIEDM
                     PYQADGTPVDIILNPLGVPSRMNVGQVLEAHLGYCARWGWEIDGEAVGSEPVRGIEKK
                     TRPSTEPSVHVATPVFDGAKWDEEDLAGKHPTIQKILGNLRPESVDGDRMVQLDGKTT
                     LYNGRTGEAYDSEVMVGYVYILKLAHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQR
                     FGEMEVWALEAYGAAYCLQELLTIKSDDVLGRVKVYEAIVKGDNIPEPGIPESFKVLI
                     KEMQSLCLNVEVLAEDGREIEMRDFDEDVYRAAEELGIDLSRPERGSDEEDERRAAGL
                     LAR"
     gene            complement(4331..4714)
                     /gene="rplL"
                     /locus_tag="QGG16_09085"
     CDS             complement(4331..4714)
                     /gene="rplL"
                     /locus_tag="QGG16_09085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HJP25468.1"
                     /translation="MMATKEEILDAIAGMTVLELSELLSDFEEKFGVTAAAPVATAAA
                     APVGGDAGGEEEEKDSFDVVLTGAGDKKIQVIKEVRSLTNLGLKDAKDLVDGAPGTVL
                     EGATKEDAEKAKEALEAAGASIELK"
     gene            complement(4714..5406)
                     /gene="rplJ"
                     /locus_tag="QGG16_09090"
     CDS             complement(4714..5406)
                     /gene="rplJ"
                     /locus_tag="QGG16_09090"
                     /inference="COORDINATES: protein motif:HMM:NF000955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015934 - large ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HJP25469.1"
                     /translation="MGEARSEKIAVVDEVREKFSASDAAVLTEYRGLDVPAMAELRRA
                     LRESGGEYKVYKNTLVRFAVEELGLEIDDLLTGPTAIAFVGEQADGSAGDPVGVAKAL
                     KEFAKANEALIIKGGLLDEKRLTAEEISALAEIAPREVLLAQLAGAMAAPMQQFAALL
                     KALPQNMAYALQALIEQGGAPGAPTVDETDAAPAAEETDATDSSTEEKAADEGTDTVG
                     APVSQDDNEEEE"
     gene            complement(5743..6438)
                     /gene="rplA"
                     /locus_tag="QGG16_09095"
     CDS             complement(5743..6438)
                     /gene="rplA"
                     /locus_tag="QGG16_09095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HJP25470.1"
                     /translation="MGKQGKRYTDASSRYDRDQMYSATEALDLALSLAGAKFDEGVDL
                     LVRLSVDPRKAEEMVRGTVALPSGTGKDVRVAVFAQGEAANAAREAGADHVGGDDLAA
                     EVEGGMLDFDVAIATPDMMPTVGKLGRALGPRGLMPNPKSGTVTDDVAKAVGEFKGGK
                     VEFRTDRYGNVHLPIGKVSFDAAALGANLLAALDEIERLKPSSAKGRYFKKVSISSTM
                     GPGIRIDPGRLTD"
     gene            complement(6578..7003)
                     /gene="rplK"
                     /locus_tag="QGG16_09100"
     CDS             complement(6578..7003)
                     /gene="rplK"
                     /locus_tag="QGG16_09100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HJP25471.1"
                     /translation="MAKKKMVAVVKIQIPAGQASPAPPVGTALGPHGVAIMDFCKEYN
                     AKTEDKRGQIVPVEISIYEDRSFTFVTKTPPTSFLIRQAAGLDKASQNPGREEAGSIT
                     WAQVTEIAESKLPDLNAIDIEGAKLQVAGTARSMGIAVS"
     gene            complement(7203..7763)
                     /gene="nusG"
                     /locus_tag="QGG16_09105"
     CDS             complement(7203..7763)
                     /gene="nusG"
                     /locus_tag="QGG16_09105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011983234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HJP25472.1"
                     /translation="MESAYDRRGNWYVVHTQSGYEKKVRQNLQARTASMHLEDRILEV
                     EIPMEDVDEFRNGKKVTVSKKVFPGYLLVRCYLDDEAWAAIRDTPGIVNFVGAGGKPS
                     RLSRKEVETFLPVADESESVVPKRSKARFGFGVGDTVRVKEGPFADFSGAIQEINEDQ
                     LKVKVLVNIFGRETPVELEFAQVAQL"
     gene            complement(8066..8362)
                     /gene="secE"
                     /locus_tag="QGG16_09110"
     CDS             complement(8066..8362)
                     /gene="secE"
                     /locus_tag="QGG16_09110"
                     /inference="COORDINATES: protein motif:HMM:NF012793.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HJP25473.1"
                     /translation="MSMNREQKRMMQRQGEVDADGEPIRQRRQQQNRSAEERAGLRQF
                     AREVRAELRKVAWPSRAETGNYTAVVIITIVAITAIVAGLDWVFSQSVLELFDV"
     gene            complement(8427..8499)
                     /locus_tag="QGG16_09115"
     tRNA            complement(8427..8499)
                     /locus_tag="QGG16_09115"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8464..8466),aa:Trp,seq:cca)
     gene            complement(8656..8817)
                     /gene="rpmG"
                     /locus_tag="QGG16_09120"
     CDS             complement(8656..8817)
                     /gene="rpmG"
                     /locus_tag="QGG16_09120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HJP25474.1"
                     /translation="MASDKRVQVTLECQECKRRNYNTTKSKVNTRERIELKKYCRWCR
                     NHVDHKETR"
     gene            complement(8893..8966)
                     /locus_tag="QGG16_09125"
     tRNA            complement(8893..8966)
                     /locus_tag="QGG16_09125"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(8930..8932),aa:Met,seq:cat)
     gene            complement(8971..9043)
                     /locus_tag="QGG16_09130"
     tRNA            complement(8971..9043)
                     /locus_tag="QGG16_09130"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(9008..9010),aa:Thr,seq:ggt)
     gene            9132..9635
                     /locus_tag="QGG16_09135"
     CDS             9132..9635
                     /locus_tag="QGG16_09135"
                     /inference="COORDINATES: protein motif:HMM:NF024812.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase family protein"
                     /protein_id="HJP25475.1"
                     /translation="MEIRLARSGDAEAIRAIYNHEVRTSTATFDIVERSVSAQEIWMA
                     DRSGAFSVLVAVEGGPDDQVIMGFASLSPFRERAAYRSTVENSIYVADGYRNRGVADR
                     LMGDLVEVARTSGFHSVIARIGGGNEASTTLHAKHGFVEVGVERQVGRKFNRWVDVTV
                     MQLVFDD"
BASE COUNT         1601 a         3113 c         3087 g         1865 t
ORIGIN      
        1 ccatgcggtc gcgccgcacc ttggaccggg tcacctcgac gccgcaacgc tcgcagatga
       61 tgcccttgaa ccggacccgc ttgtacttgc cgcaatagca ctcccagtcc ttcgtcgggc
      121 cgaagatctt ctcgcagaag agcccgtcct tctccggctt gagggtgcgg taattgatgg
      181 tctccggctt cttgacttcg ccgttggacc acatgcggat tccgtccgca gtggccaggc
      241 cgattcggag ctgatcgaat tcgtttacgt caagcactgt gtcttcctgc gtctcgttgc
      301 gatgcgtggc tggtgtctgg ttggtgtcgg tcgctcaggg gcgggtcagc gggcgagaag
      361 gccggcggca cgccgctcgt cctcctcgtc ggacccacgc tccgggcggg acaggtcgat
      421 gccgagttcc tcggcggcgc ggtagacatc ctcatcgaag tcccgcattt cgatctcgcg
      481 gccgtcctcg gcgaggacct ccacgttgag acacagggac tgcatctcct tgatgagcac
      541 cttgaagctc tcggggatgc ccggctcggg aatgttgtct cccttgacga tggcctcgta
      601 gaccttgacc cgacccaaca cgtcatcgga cttgatggtc aggagctcct ggaggcagta
      661 ggcggcgccg taagcctcga gcgcccacac ctccatctca ccgaaccgct ggccgccgaa
      721 ctgggcctta ccgccgagag gctgctgcgt gatcatcgag tacgggccgg tcgaccgagc
      781 gtggatcttg tcgtccacta ggtgggccag cttcaggatg tagacgtagc cgaccatgac
      841 ctcgctgtcg tacgcctcgc cggtccgacc gttgtagaga gtcgtcttgc cgtccagctg
      901 aaccatccgg tccccgtcga ccgattcggg tcgcaggttg ccgagaatct tctggatggt
      961 cgggtgctta ccggccagat cctcttcgtc ccatttggca ccgtcgaaga cgggcgtggc
     1021 cacgtggacc gagggctcgg tggacggacg ggtcttcttc tcgatacccc gcaccggttc
     1081 ggaccccacg gcttcgccgt cgatctccca accccaccgg gcgcagtagc cgagatgggc
     1141 ctccagcacc tggccaacgt tcatccgtga cggtacgccg agcgggttaa ggatgatgtc
     1201 caccggtgtg ccatcggcct ggtacggcat gtcctcgatg gggaggatct tggagatcac
     1261 acccttgttg ccgtggcggc cggccagctt gtcgcccacg ctgatcttgc gcttctgggc
     1321 tacgtagacc cgaaccaact ggttgatccc ggggggcagt tcgtcgccgt cgtcgcggct
     1381 ctgcacccgg acgtcgatga ccttgccggt ctcaccgtgc ggaaccttca gcgatgtgtc
     1441 gcgcacctcg cgggacttct ccccaaagat ggcccgcagg agacgctcct ccggggtgag
     1501 ttcggtctcc cccttcgggg tgaccttgcc gaccagcaca tcgccgggcg acacctcggc
     1561 gcccacgcgc acgatgccca actcgtcgag gtcggcgagg atctcgtcgg acaggttggg
     1621 gatgtcgcct gtgatctctt cggcacccaa cttggtgtcg cgagcgtcga tcgtgtgctc
     1681 gtggatgtgg atcgacgtga ggacgtcgtc cttaactagg cgctccgaaa ggatgatggc
     1741 gtcctcgaag ttgtagccct cccatgacat gaaggccacc agcaggttct tgcctagcgc
     1801 cagctcgcca ccatcggtgg acggaccgtc ggccagcaac tgaccagcct tgaccttctg
     1861 gcccggcgta acccgaatct tctggttcac gcaggtgtcc tgattagaac ggacgtactt
     1921 gagtaactgg tgggtaaccg tgccggtctt ggcgtagttc atggtgaccg acacgccgtc
     1981 gatggccatc acggtgccgg cctcattggc cagcagcatg tcggcagcat cgtgggccgc
     2041 gctggcctca atcccggtgc cgatgtatgg agcctcggcc cggaccagcg gaaccgcctg
     2101 acgctgcatg ttggcgccca tgagggcccg gttggcgtcg tcgtgctcta ggaacggaat
     2161 cagggccgtg gccaccgaca cgatctgctt gggcgagacg tccattagtt ggacctcggt
     2221 gcccggcacg taagagatct cggtggtggc accgaagaag acatcctgtt cgagctgcag
     2281 cttgaggtcg ttcagcgagg cggcctgcgg cgaccggcgc accagcacgc ggtcgttgcg
     2341 gaaggtgcca tcgtcgttaa gcggagcgtt ggcctgagcg acgacgtact cctcctcgtc
     2401 atcggccgcc atgtagacga tctcgtcggt gacgcgaccg tcgatcacct tgcggtacgg
     2461 cgactcaatg aagccgaacg ggttcacccg tccgtaggtg gccagaccac cgatcaggcc
     2521 gatgttgggg ccctcggggg tctcgatcgg acacatccgt ccgtaatgcg agaagtggac
     2581 gtcgcggacc tcgaagcctg cccgctcacg ggataggccg ccggggccga gtgctgagag
     2641 acggcgacgg tgggtcagac ccgacaacgg gttgacctgg tccatgaact gcgacaactg
     2701 gctggtgccg aagaactcct tgattgcggc aaccaccggt cggatgttga ccaggttctg
     2761 cggggcgatg gcctccacgt ccatggtcgt catgcgctcg cgcacgaccc gctccatacg
     2821 agacaggccg atacgaagct ggttctggat caactcgccc accgaacgga tacgccggtt
     2881 ggcgaagtgg tcctgatcgt cgaggcggta gccgggctca cccttggcca ggtggagcag
     2941 gtaggtacag gtggccaaga cctcggaccg ggtcaggacc ggcgagtcgg ggtcggggcg
     3001 ctcgagctcg agaccgaaga tctcctcgat cttctcgatc tcggggccga gtttccggtt
     3061 cagcttgtag cgaccgaccc gggacaggtc gtagcgacgc gactcgaaga aggcgttgcg
     3121 aaggtaggca cgggcggcct cgacggacgg tggctcaccg ggacggaccc gcttgtagat
     3181 ctcgagcagc gcctcttcct gtggcgactt gcgctcacca gcctcgacgg catcctgcca
     3241 cccttcgggg agctggtcct tctcccactg gccctcgagg tagtcgaagt accggacgaa
     3301 gcggtccagg aatcccggct cattttcctc gtcgtaaccg agggcacgaa gcagggtgaa
     3361 catcgagatg cggcgcttac gggccacccg ggttccggcg gtgacgtgct tgccgggctt
     3421 gtgctcgacg tcaaactcga tccactctcc ccggtagggg tggatggtgc cggtgaccag
     3481 ctggtgcttg gacatatttc gcagccggta ccggtcaccg ggctggaaaa tgacgccagg
     3541 ggaacgcacg agctgggaca ccacgacacg ctcggtgccg ttaatgacga aggtgccctt
     3601 ctcggtcatg cgggggaagt cccccatgaa gaccgtctgc tccttgatct caccggtgtt
     3661 ctcgttcttg aaagcggcgc gcacgaagat gggcgcggag aaggtcatgt ccctctcctt
     3721 gcattcctcg atcgtgaact tcggcggcgg gcacaggtcc tcatccgtcg ggtcgaactc
     3781 gagttccaac gagagcgtct cgctgaagtc ggtgatgggg ctgaggtccc gaaacgtgtc
     3841 agcaacgcct tctgcgctga accactcgaa cgacttccgc tggatgtcga tgaggtgggg
     3901 cagcgggagg acttcctcca ggttgccaaa cgagtaacgg tcccggacga gggggcgagc
     3961 agaggacacc tagaactcct ggccagggga aacggacgtg gtggtcaccg tggacacgtc
     4021 gacgaacgcc aagaaaacag cacgaatggc gggcgcgacc acggcaactg gggatcctaa
     4081 cggtcgcgcg caggcaggca caacccctgc ggggcagcac catccagccc catagggctg
     4141 atctgacgcg cacggtacgg gttcagcgcg tgccggtcaa ggaccgtccc cgatcgagag
     4201 gtgaacggaa ccgacgggca acccgaagcg acaggtaacc catggaaaac aacggaaccc
     4261 cgggcctcgt ccaaagacgg ggacccgggg tccgtacgaa cgccccaaca atggggcgct
     4321 taacgagttg ctacttaagc tcgatgctgg ccccggcggc ctcgagggcc tccttggcct
     4381 tctcggcgtc ttccttggta gcgccttcca gcacagtccc cggagcgcca tcgaccaggt
     4441 ccttggcgtc cttcagacca aggttggtca acgaacgcac ctccttgatg acctggatct
     4501 tcttgtcgcc agcgccggtc aggacgacgt cgaaggagtc cttctcctcc tcctcgccac
     4561 cagcgtcgcc accgaccggg gccgcagcag ccgtggccac cggggccgca gcggtcacgc
     4621 cgaacttctc ttcgaagtcc gacagcagct cactaagttc cagcacggtc atcccggcga
     4681 tcgcgtccag gatctcttcc ttcgtcgcca tgattactcc tcttcttcgt tgtcgtcttg
     4741 gctgacaggt gcaccgacgg tgtcggtgcc ttcgtccgct gccttctcct ccgtggagga
     4801 gtcagtagca tcggtttcct cggcggcggg tgccgcatcg gtctcgtcca cagtgggagc
     4861 gcccggggca cccccctgct ctataagggc ctgtagtgcg taggccatgt tctgcggcag
     4921 tgccttaagc agagcggcga actgctgcat cggggcggcc atggcgccgg ccagctgggc
     4981 cagtagcacc tcgcgcgggg cgatttcagc cagtgctgag atctcctcgg cggtcagccg
     5041 cttctcgtcc agcaggccac ccttgatgat cagagcctcg ttcgccttgg caaactcctt
     5101 gagtgccttg gctacaccta ccggatcgcc ggcggaaccg tcggcctgct cgcccacgaa
     5161 ggcaatagcc gtcgggccgg tcaacaggtc gtcaatctcg aggcccagct cctcgacggc
     5221 gaagcgcacc agggtgttct tgtacacctt gtattcgccg ccagactcgc gtagggccct
     5281 acgcagttcg gccatggccg gaacatcaag gccccggtac tcggtcagga ccgcggcatc
     5341 gctggccgag aacttctctc ggacctcgtc gaccaccgcg atcttctcgg atcgggcttc
     5401 tcccacgctc acacctcctc gtctgttcta ttcggtcggg ccggcgctgc cgtacccacc
     5461 cggtttgcgg ttgtcctgtc atgccgaccc gatggtcggc cgcacaccgc agaccgggac
     5521 ccgggcaaac ccgggtccga tcaggaggtc tcccctgctc gggcggtcga tcggtgcgcc
     5581 ggacggatcc ggtgggcatc gggactcgtt ctgcgccgtg gcgcaacccg gaggtcttcg
     5641 gtgagcgtgt cgattgtgtc ggtcagggta ccggcgacgg ccggtgcccc caccggggag
     5701 tgatcccgtt acccagagat ccgggttgcc gggaaaaccg gatcagtcag tgaggcgacc
     5761 cggatcaatg cggatcccag ggcccatcgt cgacgagatc gataccttct tgaagtaccg
     5821 gcccttggcc gacgacggct tcaggcgctc gatctcgtcg agggccgcca acaggttggc
     5881 gcccagcgcg gcggcgtcga agctgacctt gccgatcggc aggtggacgt ttccgtacct
     5941 atcggtgcgg aactccacct tgccgccctt gaactctccg accgccttgg ccacatcatc
     6001 ggtgaccgtg ccggacttcg ggttgggcat aagcccgcgc ggtccgaggg cccgaccgag
     6061 ctttccgacg gtgggcatca tgtccggggt agcaatggcc acatcgaagt cgagcatgcc
     6121 gccctcaacc tcggcggcca gatcgtcacc acctacgtgg tcggcgcccg cctcacgggc
     6181 tgcgttggcg gcttcaccct gcgcgaacac ggcgacacgg acgtccttgc cggttcccga
     6241 cgggagggcg acggtgccac gcaccatctc ctcggccttg cgggggtcga cgctaaggcg
     6301 gaccagtagg tctaccccct cgtcgaactt cgccccggcc aatgacaatg ccagatcgag
     6361 agcctcggtt gccgagtaca tctgatcgcg gtcgtatcgt gacgatgcgt ccgtgtaccg
     6421 cttgccttgc ttacccatgt cgccttcttc ctgttccagc tccctcgggc gggtcggtgt
     6481 ctccggtggg gcgaggtcct cccccatccc ggaaccgctg ttgcggtgac cctcgatctc
     6541 agtttttaga ttcccggtcg aaccgggagc cgccagctca gctgacagcg atgcccatac
     6601 tgcgcgcagt gccggcaacc tggagtttgg cgccttcgat gtcgatggcg ttcaggtcgg
     6661 gcagtttgga ttcggcgatc tcggttacct gggcccaggt gatcgaaccg gcctcttccc
     6721 gccccgggtt ctgtgacgcc ttgtcaaggc cggcggcctg acggatcagg aacgaggtgg
     6781 gcggcgtctt ggtgacaaag gtgaacgacc ggtcctcgta gatgctgatc tcgacgggga
     6841 cgatctggcc gcgcttgtcc tcggtcttgg cgttgtactc cttgcagaag tccatgatcg
     6901 ccacaccatg ggggccgagc gcggtaccca ctggcggggc cggcgatgcc tgaccggccg
     6961 gaatctggat cttgacgacc gctaccatct tcttcttcgc catgtctcgg attctctgtt
     7021 cgtgatcggg gtttcgtagt ggtattgctc gccggaacgg aagactgaac gcctctagtt
     7081 ccggtcatcg gccgtcgggg ccgatcgggg taacggtcaa gtctggtgcc ggagcggtcg
     7141 atcggcaacc tgcaccccga tgggggtcac gttgtcgccg gtcgtccggt acggacgtcg
     7201 gatcagagct gggccacctg ggcgaactcc aactcgaccg gggtctcccg accgaagatg
     7261 ttgaccagca ccttgacctt gagctggtcc tcgttgatct cctggatggc gccggagaag
     7321 tcggcgaacg gcccctcctt gacgcggacg gtgtcgccca cgccgaagcc gaaccgggcc
     7381 ttggagcgct tgggcaccac agactcggac tcgtcggcta ccggcaggaa ggtctcgacc
     7441 tccttgcgac tgaggcgcga cggcttaccg ccagcgccca caaagttcac gattcctggc
     7501 gtatcgcgga tggccgccca tgcttcgtca tcgagatagc agcgcaccaa caggtagccg
     7561 gggaagacct tcttagagac ggtgaccttc ttaccgttgc ggaactcgtc gacatcctcc
     7621 atcggaatct cgacttcgag gatgcggtcc tccaaatgca tcgaagcggt ccgggcctgg
     7681 aggttctggc ggaccttctt ctcgtagccc gactgcgtgt gaacgacgta ccagttgccg
     7741 cgccggtcat aggcgctctc cacggcgggc gtcggctcct cgtcggaatc ctcatcgagg
     7801 agctcgtcct cgtcgataac cggttcatcc gggatggcta attcctcgac tgctgcctct
     7861 tcttcctcaa ctgctgcctc ttcgcccggc tggtcggccg cctgggccgc ctcggatgcg
     7921 gcctccgggc cggcgtcagt cggatccagg accagagtcc cagtgggtag caaatcgatg
     7981 gcttctgcag gggcgtcgac gccggctgcg tcggaggctg gggcgtccgg atcaacattc
     8041 acgatggggt ctccgctagt ggacatcaga cgtcgaatag ttcgagaacg gactgggaga
     8101 acacccagtc gaggccggcc acgatggccg tgatggccac gatggtgatg atcaccaccg
     8161 cggtgtagtt gccggtctcg gcacgggacg gccaggcgac ctttcgcagc tcggcacgca
     8221 cctcgcgggc gaactggcga aggccggcac gttcctcggc cgagcggttc tgctgctgac
     8281 gtcgttggcg aatcggctcg ccgtcggcgt cgacctcgcc ctgacgctgc atcatgcgct
     8341 tctgttcgcg gttcatcgac atgggggatg tcctcgtgaa attccggtgg ctgtgttcgg
     8401 gagcggtccg cgtcggaccg gtcttgcagg gcaggaggga ctcgaacccc caaccgccgg
     8461 ttttggagac cggtgctcta ccaattgagc cactgccctg tgtcccgacc tccgacccga
     8521 ggtcggaatc ggggggcggt acgcccggag gttaccagcg gggttccgac ctcccgcagg
     8581 ggggatctgg cctcccatag ggcgatcaga tgtcccgcag gaagaacctg atgggtctgc
     8641 cgacgaaaaa cgctctcagc gcgtctcctt gtgatccacg tggttgcggc accagcggca
     8701 gtacttcttg agctcaatgc gctcgcgggt gttcaccttg gacttggtgg tgttgtagtt
     8761 gcggcgcttg cactcctggc attccagggt gacctgcact cgtttatcgg acgccatctc
     8821 ggcctcattc cttcattgat ccgccggagc gaacgtatct cgtcatcggc ggctgacccg
     8881 aaccgatgct tgtagcgacg gacagattcg aactgtcgac ctctcgatta tgagtcgagc
     8941 gctctcacca gctgagctac gtcgccagcg agctccctga cagaatcgaa ctgtcgacct
     9001 tctccttacc atggagacgc tctgccgact gagctaaggg agcctgatca cctcacgatg
     9061 accgggcaca atgatgccac gcgatccgac caatcccacc ggtgttccgc caccgggtac
     9121 cgtcagcgcc catggagatc cggctggccc ggtccggtga tgccgaagcg atccgggcca
     9181 tctacaacca cgaggtacgt acctcgacgg ccacgttcga catcgtggaa cgcagcgtct
     9241 ctgctcagga gatctggatg gccgaccggt cgggagcgtt cagcgtgctg gtggccgtcg
     9301 aaggcgggcc cgacgaccag gtcatcatgg ggttcgcctc gctgtccccg ttccgggagc
     9361 gagccgccta ccgaagcacc gtcgagaact ccatctacgt cgccgacggg taccggaaca
     9421 ggggtgtggc cgaccggctg atgggcgacc tcgtcgaggt ggcacggacc agcggtttcc
     9481 actcggtcat cgccaggatc gggggaggta acgaggcgag cacgaccctc catgccaagc
     9541 acggcttcgt cgaggtgggt gtggaacgtc aggtgggtcg caaattcaac cgatgggtcg
     9601 atgtgaccgt catgcagctt gtcttcgacg actgagcttc ctgccttcca gatactggcc
     9661 ctctga
//
LOCUS       DASCMR010000398         2936 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001932604, whole genome shotgun sequence.
ACCESSION   DASCMR010000398 DASCMR010000000
VERSION     DASCMR010000398.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2936)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2936)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2936
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001932604"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            169..834
                     /locus_tag="QGG16_09140"
     CDS             169..834
                     /locus_tag="QGG16_09140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25476.1"
                     /translation="MSETSAPTPLDERSLGWLRYLHRKATTPDDWNRNGQPHPHWDDR
                     TGEPMLSWHRFDLVDSSYSVALMADRTPAWREPYAEILDELVERHTSWWAASDWLTQF
                     GPDPDRSRYPEGWRPLVPEPLWGEYDVPGWTANGIEPYGIQMDPIAADGMLFFKGFFG
                     LLLGLHRHVTGDDRWDQPFDMIRDGEHTFTWTHSAISSHLADQWRDRPIGVHCENTKI
                     WPY"
     gene            862..1662
                     /locus_tag="QGG16_09145"
     CDS             862..1662
                     /locus_tag="QGG16_09145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25477.1"
                     /translation="MHDTLMGTDHHRVFDPWWEHATANYVTWQDGRPVAMDLYYDPVV
                     DEHVSSPMALLAPVWYLAPQRPDVAHSIWEMAVAFAGLDGDANPVGLEDPNFASLLAM
                     QTSEFDDDRIRERIWAVLDDIHEPTWDHDLGEFTFGFGLGEPHPRGQLNARVMAGWVC
                     QPGAWSRIFAENPVDRFTEPTITGVNFPDVALSEAWWDGAALHLAAQPRNASLSGTCT
                     SVRVSGLPTDGSWALTCSDGSTAPFDVLGGAVDLDLIADGSRHTLSRI"
     gene            1777..2073
                     /locus_tag="QGG16_09150"
     CDS             1777..2073
                     /locus_tag="QGG16_09150"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25478.1"
                     /translation="MSQTIHVGFPCQEGKGPELLELLKGALVETRAWDGCEAVEVFSN
                     ADDPDFVILWETFAQRSDHEAYLAWRIETGLPEALGPYLTGGLEVTYLAAHPDV"
     gene            2268..>2936
                     /locus_tag="QGG16_09155"
     CDS             2268..>2936
                     /locus_tag="QGG16_09155"
                     /inference="COORDINATES: protein motif:HMM:NF012503.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HJP25479.1"
                     /translation="MHDFDADNEALVRAVVDHALQRMADQPPMQPAKSAAELRDLVGE
                     TITAEGLGGTEALRRYVEHLAPSNIAADNPRYLAFVAGAPTPAASAFDFVVGTSSVAG
                     SSWLDGAGMVYAENQALDWIADLAGLPDTAGGCFVTGGTMGNLSALVTARDVANRARM
                     AGGLDRPIRWAVVASASTHASIDSAARVMDVDVLLADLDGELRLTGDAVTATINGRPA
                     GTEVF"
BASE COUNT          518 a         1022 c          888 g          508 t
ORIGIN      
        1 caacgtcgtt agggtgggtg gcaccgtgct ggtcgccgcc gccttccccc acaccgcgga
       61 acggatctct gccgccggat tcgccgtgca caccgttgag gcgtccgaac tggccaaggc
      121 cgagggtgcc ctgacctgct gcagtctgct cttcgaggtg agcgccacat gagcgagact
      181 tcagcgccca ccccgctcga cgagcggtca ctgggttggc tgcggtacct gcatcgcaag
      241 gccaccaccc ctgacgactg gaaccgcaac ggtcagcctc acccccactg ggatgaccgc
      301 actggcgaac cgatgctgtc gtggcaccgg ttcgacctcg tcgactccag ttactccgtg
      361 gccctcatgg ccgaccggac cccggcgtgg cgggagccct acgccgaaat cctcgacgag
      421 ttggtcgagc gccatacatc gtggtgggcc gcctcggact ggttaaccca gttcggcccc
      481 gaccccgacc gctcccgcta cccagagggt tggcgcccac tcgtacctga gccattgtgg
      541 ggcgaatacg acgtgcccgg ttggacagcc aatggcattg agccgtacgg catccaaatg
      601 gaccccattg cggcggacgg catgttgttc ttcaagggct tcttcggtct gctgctcggg
      661 ctccaccgcc acgtcaccgg cgatgaccgt tgggaccagc cattcgacat gatccgtgac
      721 ggcgagcaca cgttcacttg gacccactcc gccatctcct cccatctagc cgaccaatgg
      781 agggatcgcc cgatcggcgt gcactgtgag aacaccaaga tttggcccta ttgactaagc
      841 ggcgccggcc tcggtctgag gttgcacgac acactcatgg gcaccgacca ccatcgggtg
      901 ttcgacccgt ggtgggaaca cgccacggcc aactatgtga cgtggcagga cggtcggccc
      961 gtggccatgg acctctacta cgacccggtg gtcgacgaac atgtgtccag ccccatggcg
     1021 ctcctggcgc cggtctggta tctcgcacca cagcgacccg acgttgcgca ctccatctgg
     1081 gagatggccg tggcttttgc cggactggat ggcgatgcca acccggtcgg actcgaggat
     1141 cccaacttcg cctcgttgtt ggccatgcag accagcgagt ttgacgacga caggatccgc
     1201 gagcggatat gggcggttct cgatgacatc cacgaaccca cctgggacca cgacctcggc
     1261 gagttcacgt tcggattcgg actcggcgag ccacacccgc ggggtcagtt gaacgccagg
     1321 gtcatggccg gctgggtatg ccaaccgggt gcctggagtc ggatattcgc cgagaatccc
     1381 gtcgaccgat tcaccgaacc gacgatcacc ggagtgaact tccccgacgt cgcgctcagc
     1441 gaggcctggt gggacggagc ggccctccat ctcgctgctc aacctcgaaa cgcctcgctc
     1501 tctggaacat gtacgtctgt tcgggtctcc ggcctaccca ccgacggttc atgggccctg
     1561 acgtgctccg acggttccac cgctcccttc gacgtcttgg gcggggccgt cgatctcgac
     1621 ctcatcgccg acggcagccg gcacacgctg agccggatct gaccagcctc cgaaagctgt
     1681 aaacggctga cgatttgtca accccatcat gactctgatg agatcagatc tccagcggaa
     1741 tcaacctgat tccactcagg cggaaggcgc aatcagatgt ctcagacgat ccacgtgggg
     1801 tttccctgcc aagagggcaa gggcccggaa ctcctcgaat tgcttaaggg cgccctcgtt
     1861 gaaacccggg cctgggacgg ctgtgaagcc gttgaggtgt tctccaatgc cgacgacccg
     1921 gatttcgtga tcctctggga gactttcgcc caacgctccg accatgaggc ctatctggca
     1981 tggcgaattg agaccggcct ccccgaggca ctcggcccgt acctgaccgg cggcctcgag
     2041 gtcacctacc tcgccgccca ccccgacgtc tgatcccgtc cggcccatag gcccggatcg
     2101 gcgtagcacc gaggacaaat cgcgaccgct ttcagaagct gatccacagg gaaccgtcac
     2161 tgacctcgac cagtaaccgc tgtatctact gaagtaggta cgagccgata ttggacctcg
     2221 cctcaccgga ccctcgccga gcggagggag gcccgtagcc tcccggcgtg cacgacttcg
     2281 acgccgacaa cgaggccctc gtcagggctg tcgtcgacca cgctctccag cggatggccg
     2341 accagcctcc catgcagccg gcgaagagcg ccgccgagct ccgagacctc gtcggcgaaa
     2401 ccatcaccgc ggagggactg ggtggcaccg aagcactccg ccgctatgtc gaacacctcg
     2461 ccccgagcaa catcgcggcg gacaaccccc gctacctggc cttcgtggcc ggtgcaccca
     2521 ccccggctgc cagcgccttt gacttcgtgg tcggcacctc ttcggtggcg ggttcgagtt
     2581 ggttagacgg cgccggaatg gtctacgccg agaaccaggc cttggactgg atcgccgatc
     2641 tggccggcct gcccgacacg gcgggaggct gcttcgtcac cggcgggacg atggggaacc
     2701 tgtccgcgct agtcaccgca cgcgacgtcg ccaaccgggc ccgaatggcc ggcggactgg
     2761 accgaccgat ccgatgggcg gtcgtggcat cggccagcac ccatgcctcg atcgactcgg
     2821 cagcgcgtgt catggacgtc gatgtactcc tcgccgacct tgacggcgaa ctgcgcctca
     2881 ccggtgatgc cgtcacggcg accatcaacg gtcgtcccgc cgggaccgag gtgttc
//
LOCUS       DASCMR010000399         3029 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001934754, whole genome shotgun sequence.
ACCESSION   DASCMR010000399 DASCMR010000000
VERSION     DASCMR010000399.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3029)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3029)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3029
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001934754"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..375
                     /locus_tag="QGG16_09160"
     CDS             <1..375
                     /locus_tag="QGG16_09160"
                     /inference="COORDINATES: protein motif:HMM:NF024591.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25480.1"
                     /translation="GDYGRLEGGQLFLSSRLRDLILRGGENVYPGEVEARLEMHPAVV
                     ECAVDGVDHRTLGQEVKAYVVVRPDMALDLDEVRAFCGETLAPYKLPDHLEVLSEPLP
                     RNASGKVVKAVLRGEATQTFVE"
     gene            381..1025
                     /locus_tag="QGG16_09165"
     CDS             381..1025
                     /locus_tag="QGG16_09165"
                     /inference="COORDINATES: protein motif:HMM:TIGR03085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03085 family metal-binding protein"
                     /protein_id="HJP25481.1"
                     /translation="MAKHAHDERQVLCDLLSEVGPDAPTLCAGWRTRHLAAHLVVRER
                     RPDVGPGLVLGGSFARHTARVTERLAGRPEWDRLVGRLRSGPPAVLRPVDDPMNLIEF
                     FVHHEDVRRAVDGWTPRVLAGDVGDALWRFQRGRTSMQVRQIRDVDLSIARPGQDPVT
                     VGRRRSSEAGRPVMVTGEPGELALYFFGRRNHAVVDLTGDDDGVAEVRSATFGL"
     gene            1097..2230
                     /locus_tag="QGG16_09170"
     CDS             1097..2230
                     /locus_tag="QGG16_09170"
                     /inference="COORDINATES: protein motif:HMM:NF013347.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25482.1"
                     /translation="MVDELVAFGARPERTGRGSVSVGLTTRRLYAANLFLRCATRVLV
                     RIDRFTARSFADLERHITAIDWSPWLPSDAVPRFRVTTRHSRLWHDGAVGERFAAAFP
                     ARGDRDEHRVDPDPGVEVAGDDGGTGPLVVVRGLDDRFTVSVDASGAPLHERGWRQAT
                     AKAPLRESVAAGLLASAGWDPSSALVDPMCGSGTIAIEAALLAAGTPAAAGRDLALRA
                     WPSFEPGTWASVGADAERLRVEASVPDGTDLPRIVAADRDAGAVEAARANAERAGVAD
                     RIEFRVAPVAALEPPAGMLPSGPPGLVATNPPWGGRVGGGDLRNLYATLGNVAAERHP
                     GWQIGVLVADRSLARQVRPGLGELLHLELGGRSAHWLVGRLPS"
     gene            2456..>3029
                     /locus_tag="QGG16_09175"
     CDS             2456..>3029
                     /locus_tag="QGG16_09175"
                     /inference="COORDINATES: protein motif:HMM:NF016176.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HJP25483.1"
                     /translation="MPTPVLILVGVLALALVAWWFLVRSDTPPAPDLAKAAETAAAAQ
                     VSDTTMQATTTAVPATTGVPVVDPSGRWAVDPAIGSFRDFTSTWVGYRIDEELGKGIG
                     ATTAVGRTPLVTGTVEVSDGIVVSAEVTADLRGLQSDRAYRDGKVFEVLHVDRHPEAV
                     FVLAAPVPLTAGATEMSIAVPGVLTVNGVSV"
BASE COUNT          435 a         1003 c         1076 g          515 t
ORIGIN      
        1 ggagactacg ggcgcctcga gggaggccaa ctgttcctgt ccagccggtt gcgcgacttg
       61 atcctccgtg gcggcgagaa tgtctatccg ggcgaggtgg aggcccgact ggagatgcat
      121 ccggcggtcg tggagtgcgc cgtcgacggt gtcgaccacc gcactctggg tcaggaggtc
      181 aaggcctatg tggtggtccg gccggacatg gcgctcgacc tcgacgaggt gcgggcgttt
      241 tgtggcgaga cgctcgcccc ctacaagttg cccgatcacc tcgaagtgtt gtccgagccg
      301 ctgccccgca acgcttcagg caaggtcgtc aaggccgtgc ttcgaggcga ggccacacag
      361 actttcgtcg agtaggaccg atggctaagc acgcacacga tgagcgccag gtcttgtgtg
      421 acctgctgtc agaggtcggc cctgacgcgc cgaccctgtg tgccggatgg aggacccggc
      481 acctagccgc ccacctggtg gtgcgggagc gacgccccga tgtcggcccc ggcctagtcc
      541 tcggcggctc gttcgctcgc cacaccgccc gggtaacgga gcgcctggca gggcggcccg
      601 aatgggaccg tctcgtcggt cgcctgcggt ccgggccgcc ggcggtcctg agaccggtcg
      661 acgatccgat gaacctcatc gagttcttcg tccaccacga ggacgtccgc cgggctgtcg
      721 acggttggac cccacgggtc ttggcgggcg acgtcggcga cgcactctgg cggttccagc
      781 gaggacgaac ctcgatgcag gtccggcaga tccgcgacgt cgacctgtcg atcgctcggc
      841 cgggacagga tccggtcacc gtcggtcgac gacggtcatc ggaagcgggt cgaccagtga
      901 tggtcaccgg agagccgggc gaactggccc tttacttctt tggacgccga aaccacgccg
      961 tggtggacct gaccggcgac gacgacggcg tggctgaggt ccgctcagcg acattcgggc
     1021 tctgaacacc atgggccgcc gccgtgcgtc tgaccatccg tgcctggttg tctgcccgcc
     1081 ggggctcgag gatctcgtgg tcgacgaact ggtggccttc ggtgcccggc ccgagcggac
     1141 cgggcgggga agcgtgtcgg taggcctcac aacccggcgc ctctacgcag ccaacctctt
     1201 tctccggtgc gcgactcgag tcctggtccg gatcgacaga ttcaccgcac ggtcgttcgc
     1261 cgacctagag cggcacataa ccgccatcga ctggtcgccg tggctgccca gcgatgccgt
     1321 tccgcgcttt cgggtgacga cccggcactc gaggctctgg cacgacgggg cggtgggcga
     1381 acgcttcgct gccgccttcc cggctagggg cgatcgcgat gagcatcggg tcgaccctga
     1441 ccccggggtc gaagtggcgg gtgacgatgg tggaaccggt ccgctggtcg tggtgcgggg
     1501 cctagatgac cgattcaccg tcagtgtcga tgcctcgggc gcgccactcc acgaacgcgg
     1561 ttggcgacag gccacggcga aggcgccgct ccgagaatcg gtggccgccg gcctactcgc
     1621 ctcggcaggc tgggacccgt catcggccct ggtcgatccc atgtgtggat caggcaccat
     1681 tgccatcgaa gcggctctgc tcgccgccgg gacaccagcc gcagcgggcc gcgacctggc
     1741 tctccgggca tggccctcgt tcgaaccggg cacctgggcc agtgtgggcg ccgacgccga
     1801 acgactccgg gtcgaggcgt cggtgcccga cggtaccgac ctgccgcgca tcgtggctgc
     1861 cgaccgggat gccggagcgg tcgaggctgc ccgagccaac gccgaacggg ccggcgtagc
     1921 cgaccgcatc gagtttcggg tggctccagt ggcggccctc gaaccacccg ccggcatgct
     1981 tccatccggg ccgccgggcc tagtggctac caacccgccg tggggtggcc gggtcggtgg
     2041 aggtgatctc cggaacctct acgccacgct tggcaacgtc gccgccgaac gccatccagg
     2101 ctggcagatc ggggtgctgg tcgccgaccg ttccctggcc cggcaggtca ggcctgggct
     2161 cggcgaactt ctacacctgg aactcggcgg ccgatcggct cactggttgg tcggccgcct
     2221 gccctcctga cggagcccca ggctttaagg ggtgccgcct agtcgagggc gtccttgaac
     2281 aggcggtgtt cgtctccctc tccccacggg cgggtgatct ggtgttcgta gaacaggccg
     2341 aacttcatga tgtggagcct atggacgctt gcccgaccgg gcccggtcgg gagggggagc
     2401 cctagggtcg cctcatggtg gttcgaccgt ggtgaccgtg gcggggagac ggaaggtgcc
     2461 cacgccggtt ctgatattgg tgggggtcct cgcgctagcc ctagtcgctt ggtggttcct
     2521 cgtgcggtcc gatacgccac ccgctccgga tttggccaag gcggccgaga cagcggcggc
     2581 cgctcaggtg tcggacacca cgatgcaggc cacgaccacc gctgttccgg cgacgactgg
     2641 cgtgccggtc gttgacccgt cgggaaggtg ggccgtggac cccgctatcg gatcgttccg
     2701 ggacttcacg tcgacttggg tgggttaccg gattgacgag gaactgggga aggggatcgg
     2761 agccacgaca gctgtgggcc gtacaccgct ggtcactggg accgtggagg tcagcgacgg
     2821 gatcgtagtg tccgctgagg tcacagccga tctccgtggc ttgcagtccg accgggccta
     2881 ccgggacggg aaggtctttg aggttctcca tgtcgaccgg catcccgagg ccgtcttcgt
     2941 actggccgcc ccagttcccc tgaccgctgg cgccaccgag atgtccatcg cggtgcccgg
     3001 cgtcctgacc gtcaacgggg tgtcagtgg
//
LOCUS       DASCMR010000400         4225 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001935114, whole genome shotgun sequence.
ACCESSION   DASCMR010000400 DASCMR010000000
VERSION     DASCMR010000400.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4225)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4225)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4225
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001935114"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..978)
                     /locus_tag="QGG16_09180"
     CDS             complement(<1..978)
                     /locus_tag="QGG16_09180"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024831.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HJP25484.1"
                     /translation="MAVLSMHTSPLVQPGSGDGGGMNVYVRELASALSQAGGGSTVFT
                     RRTDDHTPTVVDVEPGFRVVHIDAGPHDLPKEDLPGVVDEFTDGVASYLTSHPGHDGV
                     LANYWLSGVSGHRLKHELGLPLLTIFHTLAQVKAETGDPEPRRRIEAEMAVVGCSDLM
                     LANSPEERRQLVDLYGADPTRIEVVPPGVDHAFFTPGSQSVARRATGLGDGPVMLFAG
                     RIQPLKGVDVAVGALDMLGRSDARLVVVGGASGAKGEAEERRLHELADMHGLVGRVQF
                     VPPQPHHCLAYWYRAADVVVMPSRSESFGLVALEAAACGVPVVAADVGGL"
     gene            complement(991..1227)
                     /locus_tag="QGG16_09185"
     CDS             complement(991..1227)
                     /locus_tag="QGG16_09185"
                     /inference="COORDINATES: protein motif:HMM:NF014636.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoaD/ThiS family protein"
                     /protein_id="HJP25485.1"
                     /translation="MAVLRLFASVRVAADTGKVHVPGSTVGEVLAAADEKFGEAFAGV
                     ATTCRVWLNGEAAMATDPVDDDDEVALLPPVSGG"
     gene            1299..1904
                     /locus_tag="QGG16_09190"
     CDS             1299..1904
                     /locus_tag="QGG16_09190"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012521.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HJP25486.1"
                     /translation="MPADRTPVTRLLVVRHGQSEWNAAGQWQGRADPPLTMEGQRQAA
                     AAARALGAFDAVVSSPLLRAAETATIISEHLGIGPVLVETDLMERDAGEWQGLTRGQI
                     ETDWPSYLEQGKRPPGYEPDQVMLDRVMAALDRVVQQASGGEVLVVAHGGVVYSLEEA
                     CGEPWRRIPNLGARWFEIADGRLSVGPRVELIPDGTLPDVL"
     gene            complement(1948..2169)
                     /locus_tag="QGG16_09195"
     CDS             complement(1948..2169)
                     /locus_tag="QGG16_09195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25487.1"
                     /translation="MTDPDIAPVVPPAGPAPETDDAELEVLESDLATIEAVMDRVDFG
                     DLEGAEAMMARLSDGQLEEGHAENTDESE"
     gene            2193..2996
                     /gene="yaaA"
                     /locus_tag="QGG16_09200"
     CDS             2193..2996
                     /gene="yaaA"
                     /locus_tag="QGG16_09200"
                     /inference="COORDINATES: protein motif:HMM:NF015820.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HJP25488.1"
                     /translation="MPASLILLPPSEGKAAGGEGPSWDSVDQSFSDLAGPRREVIAAL
                     DKAMRGSAEARSKLLGVKAARADEATAANLAVASSPTMAAIDRYTGVLYDALEYPSLP
                     AKVRRGVDRQVVIFSGLWGVVRPTDPIPNYKLKMGASLPGLGKPARFWKPLISDAMAD
                     AMAASRTDTVWDLLPNEHAAAWDPSVAGRRIRVRFLDDVMKNGKRTLVTVSHWNKLLK
                     GALVCHVVEHGLDDPAGLIDFDHPEGYRYDPSLTTTTGTTTDVALVTKR"
     gene            complement(3028..>4225)
                     /locus_tag="QGG16_09205"
     CDS             complement(3028..>4225)
                     /locus_tag="QGG16_09205"
                     /inference="COORDINATES: protein motif:HMM:TIGR01679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003885 - D-arabinono-1,4-lactone oxidase
                     activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="D-arabinono-1,4-lactone oxidase"
                     /protein_id="HJP25489.1"
                     /translation="RVVGAGHSFTAVARTDDVLVSLDELTGVAAVDDDTGRVTVRAGM
                     RLCDLNPELDARGLAMPNLGDIAYQSVAGAISTSTHGTGLGFQSIAAGVVGLRLVTGD
                     GTVVVLDDDHDPDLRDVARVGLGALGVVTEVTLQCVPAFNLHAIDEIMAVDDVVAAFD
                     SWAEETDHAEFFWMPHTGMAQVKRNTRTIEAPRPARNIGHAARRRWKRFKNKELLENV
                     AFGALNHMGRLRPSSIPRLNNLVFDEVGRAEYLTTSYEVFASERRVRFLEMEYAVPRE
                     HGLEAFSRVRSLIDTLDRPISFPIEFRILGGDDVPLSTAEGRDTCFIAVHVFRGTPFE
                     QYFRGVEAIMDDYAGRPHWGKLHFQTAATLVRRYPQWDRFQEARDRLDPTRRFTNDHL
                     ATVLGR"
BASE COUNT          739 a         1420 c         1411 g          655 t
ORIGIN      
        1 cagcccaccc acgtcagcgg cgactacggg cactccgcag gccgccgcct ccaacgccac
       61 caggccgaac gactcggacc ggctgggcat gacgactacg tcagcagccc ggtaccagta
      121 ggcgaggcag tggtggggct gcggcgggac gaactggacc cggccgacca gaccgtgcat
      181 gtcggccagt tcgtgcaggc gccgctcctc agcctcaccc ttggcaccac tggcaccgcc
      241 caccaccacg aggcgagcat ctgagcggcc gagcatgtcc agagcgccga cggcgacgtc
      301 aacacccttg agtggttgga tacggcccgc gaacagcatc accggaccat caccgagacc
      361 ggtggctcga cgggccaccg actgggaccc gggcgtgaag aaggcgtgat cgacaccggg
      421 ggggacgacc tcgatgcggg tcggatccgc tccgtacagg tcgaccagtt ggcgacgttc
      481 ctcggggctg ttggccaaca tcagatcgga acagccgacc accgccatct cggcctcgat
      541 ccggcgtcgg ggttccgggt caccggtctc agccttcacc tgggccagcg tgtggaagat
      601 ggtcaggagg ggcaggccca actcgtgctt gagtcgatgg cccgacaccc cactcaacca
      661 gtagttggcc agcacaccgt cgtgccccgg gtgagatgtc aggtaggacg ccaccccatc
      721 ggtgaactcg tcgacgacgc ccggaaggtc ctctttgggg aggtcgtgtg gaccggcatc
      781 gatgtgaacg acccggaagc ccggctcgac gtcaaccacc gttggggtgt ggtcgtcggt
      841 tcggcgggta aacaccgtgg acccaccgcc ggcctgggac agcgcggagg ccagctcgcg
      901 gacatagacg ttcatgccgc caccgtcacc cgatccgggc tggacgagcg gcgaggtgtg
      961 catggagagg acggccaagc gacgcatgat tcagcccccc gaaacgggtg gcagtagggc
     1021 cacctcgtcg tcgtcgtcca ccggatcggt agccatagcg gcctcgccgt tcaaccacac
     1081 ccggcaggtg gtggccacac cggcgaacgc ctcaccgaac ttctcgtcgg ccgcggcgag
     1141 gacctcgccc acggtggatc cggggacgtg gaccttcccg gtgtcggcag cgacccggac
     1201 cgaggcaaag aggcgcaaca cggccatccg tcaagtgtat ggatgacctc cccggcctcc
     1261 ccattcggag gacggggagg ccggtacggt cggtggccat gcccgctgac cggacgcccg
     1321 tcaccaggct gctggtggtt cgccacgggc agtcggaatg gaacgcggcg ggtcaatggc
     1381 agggccgtgc cgacccgcca ctgaccatgg agggccagcg ccaggcagca gccgccgccc
     1441 gtgcgctggg ggccttcgat gccgtggtgt cctcaccgtt gctgcgggcc gctgagacgg
     1501 cgaccatcat ttccgagcac ctgggcatag gcccggtact ggtcgaaacc gacctcatgg
     1561 aacgcgacgc cggcgagtgg cagggcctga cccgcgggca gatagagacg gactggccca
     1621 gctacctcga acagggaaaa cggccaccgg gctacgaacc cgaccaggta atgctggacc
     1681 gggtcatggc cgcgctggat cgggtggtac aacaagccag tggcggcgag gtgctagtgg
     1741 tggcccacgg cggggtcgtc tactcgctcg aagaggcctg cggggagccc tggcggcgca
     1801 tcccgaacct cggtgcccga tggttcgaga ttgcggacgg acgcctgagc gtaggaccac
     1861 gagtggaact catccctgac ggaaccctgc ccgacgtgct ctgacccggc accggtacca
     1921 gcgccggtac cggtggaggc gctagcccta ctcggattcg tcggtgtttt cggcgtggcc
     1981 ttcttcaagc tggccatcgg acagcctggc catcatggcc tcggcgccct caaggtcgcc
     2041 gaagtcgacc cgatccatga ccgcctcgat ggtggccaga tcggactcca acacctcaag
     2101 ttcggcgtca tcagtttcgg gtgccgggcc ggccggaggc acaacaggag ctatgtcagg
     2161 gtcggtcacg cgggtgagag taccgtcgac cggtgcctgc ctcgctgatc ctcctcccac
     2221 cttccgaggg caaggccgct ggtggtgagg ggccctcgtg ggactccgtc gaccagtcgt
     2281 tctccgatct tgccggcccc cgccgtgagg tgatcgccgc cctcgacaag gcaatgcgcg
     2341 gatcagccga ggctcgctca aagcttctgg gggtgaaggc cgcgcgggcc gacgaggcca
     2401 ccgcggccaa tttggcggtg gcttcgtcgc caactatggc agccatcgac cgctacaccg
     2461 gcgtgctcta cgacgcgctg gagtatccgt cgctcccagc caaggtacgc cggggcgtgg
     2521 accgccaagt agtgatcttc agtgggctct ggggggtggt acgtcccaca gacccgattc
     2581 ccaactacaa gttgaagatg ggtgcatcgc tccccggcct cgggaagccg gcccgattct
     2641 ggaagccgct gatcagcgac gcgatggccg atgcgatggc cgcatcgcga acggacacgg
     2701 tctgggacct gctgcccaac gagcacgccg cggcctggga tccatcagtc gccggtcggc
     2761 gtattcgggt gcgcttcctg gacgacgtga tgaagaacgg taagcggaca ctggtgacgg
     2821 tgtcgcactg gaacaagttg ctgaaaggag ctctggtgtg ccacgtggtc gagcacgggt
     2881 tggatgaccc agccggcctg atcgacttcg accaccccga gggctaccgc tacgacccgt
     2941 cactcaccac gaccaccggt accaccaccg acgtcgccct cgtcaccaaa cgctgactgt
     3001 cagacgctgg ctgtcagaca ctgaaagtca gcggccgagg acggtggcga ggtggtcgtt
     3061 ggtgaagcgg cgtgtggggt cgaggcggtc ccgggcctcc tggaatcgat cccactgcgg
     3121 gtagcggcga accaacgtgg ctgccgtctg gaagtgaagc tttccccagt gggggcgccc
     3181 ggcatagtcg tccatgatcg cctcaacgcc ccggaagtac tgctcgaacg gcgtcccccg
     3241 gaacacgtgc acggcaatga aacaggtgtc gcgcccctcg gccgtcgaca gcggcacatc
     3301 gtcgccgccc aggatgcgga actcgatcgg gaagctgatc ggccgatcca gcgtgtcaat
     3361 cagcgaccgc acccggctga acgcctcgag gccgtgctcg cggggcaccg cgtactccat
     3421 ttccaggaac cggacccgcc gctcgctggc gaacacctcg tacgaggtgg tcaggtactc
     3481 ggctcgccca acctcgtcga acaccaggtt gttgagccgt gggattgacg acgggcggag
     3541 ccgccccatg tgattcaacg ctccgaaggc cacgttctcc agcaactcct tgttcttgaa
     3601 gcgcttccat cggcgccgag ccgcatggcc gatattgcgg gctggtcgcg gcgcctcaat
     3661 ggtgcgtgtg ttgcgtttca cctgggccat cccggtgtgt ggcatccaga agaactcagc
     3721 gtggtcggtc tcctcggccc agctgtcgaa ggcagccacc acgtcatcga cagccatgat
     3781 ctcgtcgatg gcgtgcaggt tgaaggccgg gacgcactgc agggtgactt cagtgaccac
     3841 cccgagcgct ccgaggccta cccgtgccac atcacgcagg tcggggtcgt ggtcatcatc
     3901 aagtaccacg accgtgccgt cgccagtgac cagtcgtagg ccgaccaccc cggcggcgat
     3961 cgactggaat cccagcccgg ttccgtgagt cgaggtggag atggctccgg ccaccgactg
     4021 gtaggcgatg tcgcccaggt tgggcatggc caggccacgg gcatccaact ccgggttgag
     4081 atcgcacagg cgcatcccgg cccgcacggt cacccgtccg gtgtcgtcgt cgacggccgc
     4141 caccccggtc aattcgtcga ggctgaccag cacgtcgtcg gtgcgggcca ccgcagtgaa
     4201 cgaatggccg gcccccacca cccgg
//
LOCUS       DASCMR010000401         3919 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001935314, whole genome shotgun sequence.
ACCESSION   DASCMR010000401 DASCMR010000000
VERSION     DASCMR010000401.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3919)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3919)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3919
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001935314"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..276
                     /locus_tag="QGG16_09210"
     CDS             <1..276
                     /locus_tag="QGG16_09210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="flap endonuclease"
                     /protein_id="HJP25490.1"
                     /translation="RYGHLESIPADAEDWDVTVRSAAKLAATLVERRDDAELYRHLAT
                     LDLDAPVMDDVEDLRWTGPADHLEAVCAHIDAPRVAERARRLAAERT"
     gene            complement(318..986)
                     /locus_tag="QGG16_09215"
     CDS             complement(318..986)
                     /locus_tag="QGG16_09215"
                     /inference="COORDINATES: protein motif:HMM:TIGR00730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HJP25491.1"
                     /translation="MVATGYRTRSSCPKADRYGPVMALDNDATTTTGRPPSGRRALGV
                     FCGSRSGTDDSATDLARELGGAMAATGIDLVYGGSRIGVMGALAEAVLDAGGRIIGVI
                     PSGLFGDEMPHCRLTERIEVADMHERKRIMYARADAFCCLPGGYGTLEELFEAATWTQ
                     LGLHDRHKPVALLDGGAPGSPGYWSLLEAFLDAMVDAGYAKPENRGIVKRVETVAEVL
                     SLLD"
     gene            985..2541
                     /locus_tag="QGG16_09220"
     CDS             985..2541
                     /locus_tag="QGG16_09220"
                     /EC_number="6.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016874 - ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA carboxylase subunit beta"
                     /protein_id="HJP25492.1"
                     /translation="MADHTMSERLDGLNERRESAIHAGPERAVQRQHDKGKMLARERI
                     EYLLDPGSFHELDMLARHRAHESGIEERPYTDGVITGWGTIDGRKVFLFSQDFTVFGG
                     ALGEVFAEKIHKVMDLALSVGAPFVGLNDGAGARIQEGVVSLDGYGGIFWRNVQASGV
                     IPQISVVLGPCAGGAVYSPAMTDFIFMVREKSHMFITGPDVVKTVTGEEVTLEELGGA
                     GSHSTKSGVATFVCEDEHEVLDEVKALLAQLPSNNLEEAPLVETDDPGDRLCPELNDL
                     MPDSANVPYDMRTVIETVLDDGYFLEYHSAWAGNIVCGFGRLDGRSVGVVGNQPMHFA
                     GVLDIEASEKAARFVRTCDAFNVPIITFVDVPGFLPGVDQEYGGIIRHGAKLLYAYCE
                     ATVPRIQVITRKAYGGAYVVMDSKSVGSDLSLAWPSAELAVMGPQGAVEIVHRRELQD
                     AADPDTRRAELIDEYTEKFANPYVAAERGYVDDVIDPADTRVKLVAGLRMLVTKQEES
                     PRRKHGNVPL"
     gene            2566..2787
                     /locus_tag="QGG16_09225"
     CDS             2566..2787
                     /locus_tag="QGG16_09225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25493.1"
                     /translation="MESEQSAQSGIRVTAEGATPQELAAILAAVEALWPKSGVDARTP
                     PDPGVWRFSGRWWRAGDLPICRSRTGLGS"
     gene            complement(2784..3470)
                     /gene="aat"
                     /locus_tag="QGG16_09230"
     CDS             complement(2784..3470)
                     /gene="aat"
                     /locus_tag="QGG16_09230"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HJP25494.1"
                     /translation="MPGTRPPVEPPASTWTFPRADTADENGVVGVGADVDPGTLLTAY
                     RSGLFPMPVEPDGPMAWWSPDPRGVLEINDLRVSRSLRRSLGRYEVRVDTAFADVVVA
                     CADPTRDRGWIDERIAGAYTELHRLGWAHSVEAWDDCGLAGGLYGVAVGGLFAGESMF
                     HRRTDASKVALHHLVDLMGTETHRLIDVQWCTPHLARMGASEMDRDRYLERLADLVTV
                     PGPCWPGEPI"
     gene            complement(3513..>3919)
                     /locus_tag="QGG16_09235"
     CDS             complement(3513..>3919)
                     /locus_tag="QGG16_09235"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: protein motif:HMM:NF012387.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HJP25495.1"
                     /translation="FRFDPSIDIIQGGAPTTNDWSDRGPGYTIPDEGGAYYATTSGQL
                     LGPFTYQAGDLVMARSAGPDSSGAQFFFATGSRTSLLDAQGTYIVFGHADEAGTAVLQ
                     AMMGLYEVDETSQYGGGPSRDVVVRSVTIEAD"
BASE COUNT          670 a         1297 c         1313 g          639 t
ORIGIN      
        1 cggtacggcc acctcgaatc gatcccggct gacgccgagg actgggatgt cacggtgcgg
       61 agcgccgcca agctggctgc cacgttggtc gagcggcgcg acgacgccga gctctaccgg
      121 catctggcca ccctggacct cgatgccccg gtcatggacg acgtggagga cctccggtgg
      181 accggcccag ccgaccacct tgaggcggtg tgcgcccaca tcgacgcccc ccgtgttgcc
      241 gaacgggccc gtcggctggc cgccgaacgc acctgaccag tagcaactgg tttagtcgag
      301 cccggccagc acccgtctca gtccagcagc gagagaacct cggccaccgt ttccacccgc
      361 ttgacgatgc cgcggttctc aggctttgcg taacccgcat ccaccatggc gtccaggaac
      421 gcctcgagga gggaccagta gccgggtgat ccgggtgcgc ctccgtctaa cagggcaacc
      481 ggcttatgcc gatcgtggag gcccagctgg gtccaggtgg ctgcttcgaa caactcctcg
      541 agggtgccgt acccgccggg caggcagcag aaagcgtcgg ctcgggcgta catgatgcgc
      601 tttcgctcat gcatgtccgc cacctcgatg cgctcggtga ggcgacaatg tggcatctca
      661 tcgccgaaca ggcccgacgg gatcacaccg atgatccggc caccggcatc caacacggcc
      721 tcggccaacg cacccatcac cccaatccgc gaacccccgt agacgaggtc gattccggtt
      781 gcggccatgg ccccacccag ctctcgggcg aggtcggtcg ccgagtcgtc ggtgccggaa
      841 cgggaaccgc agaaaacgcc gagagctcgc ctcccagatg ggggcctacc ggttgtcgtc
      901 gtggcgtcat tgtcgagggc catgaccgga ccgtaccggt ctgctttcgg acaggacgac
      961 cgcgttctgt accctgtggc gaccatggcc gatcacacga tgtccgaacg tctcgacggt
     1021 ttgaacgaac gccgcgagtc ggcgatccac gccggccccg agcgggccgt tcagcgccag
     1081 cacgacaagg gcaagatgtt ggcccgcgag cggatcgagt acctgcttga cccggggtcc
     1141 ttccacgagc tcgacatgct ggcccgccat cgggcgcatg agagcggcat cgaggagcgg
     1201 ccctacaccg acggggtgat taccgggtgg ggcaccatcg acggccgcaa agtcttcctg
     1261 ttctcccagg attttacggt gttcggcggg gcgctcggcg aggtgttcgc cgagaagatc
     1321 cacaaggtca tggacctggc actcagcgtc ggcgcgccgt tcgtcggcct caacgacggg
     1381 gctggggccc gtatccagga gggcgtggta agcctcgacg gttacggcgg gatcttctgg
     1441 cgaaacgtcc aggcctcggg ggtcatcccg cagatcagcg tggtcctcgg cccgtgcgcc
     1501 ggaggagccg tgtatagccc ggccatgact gacttcatct tcatggtccg tgagaagtcc
     1561 cacatgttca tcaccggtcc cgacgtggtc aagacggtca ccggcgagga ggtcaccctc
     1621 gaggaacttg ggggtgccgg cagtcactcg acgaagtccg gcgtggccac cttcgtgtgt
     1681 gaagacgaac atgaagtgct cgacgaggtc aaggccctac tggcccaact gccgtccaat
     1741 aacctcgagg aggccccgct cgtcgagact gatgaccccg gtgaccgcct gtgtcccgag
     1801 ctgaacgacc tcatgccgga cagcgccaac gtcccctacg acatgcggac cgttattgag
     1861 acggtgctcg acgacggcta cttcctcgag taccactcgg cctgggccgg caacatcgtg
     1921 tgcggcttcg ggcgactcga cggtcgcagc gtcggcgtgg tgggaaacca gcccatgcat
     1981 ttcgccgggg tgctcgatat cgaggcctca gagaaggcgg cccgattcgt tcgcacgtgt
     2041 gacgcgttca acgtgccgat catcaccttc gtagacgtac ccggcttcct ccccggggtc
     2101 gatcaggagt acggaggaat cattcgccac ggggccaagt tgctctacgc ctactgcgag
     2161 gccaccgtgc cccgcatcca ggtcatcacc cgcaaggcct acggcggcgc ctacgtggtc
     2221 atggactcca agtcagtggg ttcggacctg tcgctggcct ggccgagtgc cgagctggct
     2281 gtcatgggcc cgcagggagc cgtggagatc gtccaccgcc gggaactcca ggatgccgcc
     2341 gaccccgaca cccgccgggc tgagctcatt gacgagtaca cggagaagtt cgccaatcca
     2401 tacgtggccg cggaacgggg ttacgtagac gacgtgatcg acccggccga cactcgggtc
     2461 aagctggtgg ccggactccg gatgttggtg accaaacagg aggagtctcc tcgccgcaag
     2521 cacggaaacg tgcccctcta gcgggcggcg atcgaggaat aggtcatgga atctgagcag
     2581 tccgcgcagt caggcatccg ggttaccgcg gagggtgcga cccctcagga gttggcggcc
     2641 atcctggcgg ccgtcgaggc gctgtggccg aagtcgggtg tcgatgcgcg aacgccgccc
     2701 gatcctgggg tctggcgctt ctcgggtcgg tggtggcgag ctggcgactt gccgatttgc
     2761 cggtcccgta ccgggctggg ctcctagatc ggttcacccg gccagcaagg gccgggcacg
     2821 gtgaccaggt cggcgagccg ctccaggtag cgatccctgt ccatctcgct ggcccccatt
     2881 cgtgccaagt gcggcgtgca ccactgcacg tcgatcaggc gatgggtttc ggttcccatg
     2941 agatcgacga ggtggtgtag ggcgaccttg gaggcgtcgg tgcgtcggtg gaacatcgac
     3001 tcgccggcaa ataggccgcc gaccgccacc ccgtagagcc caccggccag gccgcagtcg
     3061 tcccaggcct cgaccgagtg agcccagccc agacggtgga gctcggtgta ggccccagcg
     3121 atgcgttcat cgatccagcc ccggtcgcgt gtcggatcag cgcacgccac caccacgtcg
     3181 gcaaacgccg tgtcgacacg cacctcgtag cggcctagcg aacgcctcag cgatcgggac
     3241 acccgcaggt cgttgatctc gagcacgccc cggggatcgg gcgaccacca ggccatgggg
     3301 ccatccggtt ccacgggcat gggaaacagg cccgaccggt aggccgtcag cagagtgccg
     3361 gggtctacgt cggcacctac gccgaccacc ccgttctcat cagccgtatc ggcccggggg
     3421 aacgtccagg tactggcagg cggctcgacg ggcggacgcg tcccgggcat cggcacgatc
     3481 cggcctcgta gtgtcgggtg gggtcagacc ggtcagtcgg cttcgatggt gaccgagcgg
     3541 acgaccacgt cccgactcgg gccaccgccg tactgcgagg tctcgtccac ctcgtagagg
     3601 cccatcatcg cttgtagcac tgccgtgccg gcctcatcgg cgtggccgaa gacgatgtag
     3661 gtgccctggg cgtccagcag cgaagtccgg gatccggtgg cgaagaagaa ctgggcgccc
     3721 gagctgtctg ggccggccga gcgggccatc accagatcgc cggcctgata ggtgaacggg
     3781 cctaagagtt ggcctgaagt ggtggcgtag tatgcgccgc cttcatcggg gatggtgtag
     3841 ccggggcccc tgtcggacca gtcattggtg gtcggtgcgc cgccctggat gatgtcgatc
     3901 gacgggtcga accggaaca
//
LOCUS       DASCMR010000402         2022 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001938195, whole genome shotgun sequence.
ACCESSION   DASCMR010000402 DASCMR010000000
VERSION     DASCMR010000402.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2022)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2022)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2022
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001938195"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            317..1843
                     /locus_tag="QGG16_09240"
     CDS             317..1843
                     /locus_tag="QGG16_09240"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_process: GO:0015837 - amine transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HJP25496.1"
                     /translation="MTATTTQERVSQRVPLWRDVVVLKWVTQVVLLFVVLGTMWFLAS
                     QAGDNLRARNINTDFDFLERPVDIQISEGIDTHPDTGGRALWAAMVNTLRLSIAGIFF
                     ATILGVIVGLARLSDNWLVRRIATSWVEVLRNIPLLVQMVIYYSVMTAAFPKLGLETG
                     PINGWLHVSNKGISMPRVHIADGFYQWAVVMLVGVVAAHFVRRHRQRIQDETGANTSP
                     ILWALGTIALFGLIGLFVHPAFSWLGSVFSAVADLLDSLPVAVPQLLFSAMAVGGATV
                     WIRRFVSDHRSARGHLSLTDDDWFRIAFTAVASLAVVFLVVRWSGLSAWTLNSGRDLF
                     EVLADKFNVDGAARPFDAMRPDIVQKGKFPNYGKNGLTMSIGFASVFFAVVFYTSAFI
                     GENVRGGILAVPKGQTEAAKAVGLRRGQILRHVVLPQALRVILPPTGNQYLNLTKNTS
                     LAVAVGMSDMVQVGTTVFNQTGRTLPVVAIWMLFYLSCSLTISVVVNWFNVRMKLVER
                     "
BASE COUNT          343 a          680 c          578 g          421 t
ORIGIN      
        1 gccttccacc aggtgatcag gcaggttgga agctacggcg aggtctatga ccgcaacctg
       61 aacccggtcg gcctgtaccg cgagggcagc gccaacgccg gatggctcga cgggggcctc
      121 atctactccc cgccggcccg ctaggtaggc gaaccaacgc tattgatgat cccggggtct
      181 gggggcgcca gctcccaggc cccgggatca ttcgcgttaa cgacacttga gcacgcggat
      241 actgtccatc ttctggaacc cttccagaga agtctttgac tgatccccag ccccacgatc
      301 tgagcccacg tcgaccatga cggccaccac cacccaagag cgggtttctc agcgagtacc
      361 gctgtggcgc gacgtcgtcg ttctcaagtg ggtgacacag gttgtgctgc tgttcgtggt
      421 gctcggaacg atgtggttcc ttgccagtca agccggggac aaccttcggg cacgaaacat
      481 caataccgac ttcgacttcc tcgaacgccc cgtcgacatc cagatcagtg agggaatcga
      541 cactcacccg gacacgggcg ggcgggctct atgggccgcc atggtcaaca ccctgcgtct
      601 atccattgca ggcatcttct tcgccacgat cctgggcgtg attgtcggcc tggcccggct
      661 gtctgacaac tggctggtgc gccgcattgc cacctcgtgg gtcgaggtat tgcggaacat
      721 tccgctgctg gtgcagatgg tcatctacta ctcggttatg acagccgctt ttcccaagct
      781 cggcctcgaa accggaccca tcaacggctg gctgcatgtg tccaacaagg gcatctcgat
      841 gccacgagtc cacatagccg atggtttcta ccagtgggcg gtcgtgatgc tcgtcggtgt
      901 ggtggccgct cacttcgtcc gccgtcaccg tcaacgaatt caggacgaga ccggcgccaa
      961 cacctcgccg atcctgtggg cgctcggaac gatcgccctg ttcgggctga tcggcctgtt
     1021 cgtccaccct gcgttctcct ggctgggctc cgtcttcagt gccgtcgctg acctgctcga
     1081 ctcgcttccc gtcgccgtcc cacagttgct gttctccgcc atggctgtcg gcggtgccac
     1141 cgtttggatc cgccgtttcg tttccgacca ccgcagtgcc cgcggacacc tctcgctcac
     1201 cgacgacgac tggttccgga ttgcctttac cgctgtggcc tcactggccg tcgtcttcct
     1261 ggtggttcgc tggtccggcc tctcggcgtg gaccctcaac agcggccgcg acttgttcga
     1321 ggtcctagcc gacaagttca acgtcgacgg tgcagcccgc ccattcgacg ccatgcgccc
     1381 cgacatcgtc cagaagggca aattccccaa ctacgggaag aacggtctga cgatgtcgat
     1441 tggcttcgcc tcggtgttct tcgctgtcgt gttctacacg tctgccttca tcggcgaaaa
     1501 cgtccgaggc ggcatcctgg ccgtgcccaa gggtcagacc gaggcggcca aggctgtcgg
     1561 tctccgccgg ggacagatcc tccgccacgt ggtacttcct caggctctcc gggtcatcct
     1621 gcccccgacc ggcaaccagt acctgaacct gaccaagaac acctcgctgg ccgtcgccgt
     1681 cggcatgagc gacatggtcc aggtcggtac cacggtgttc aaccagaccg gccggacact
     1741 ccccgtggtg gccatctgga tgctcttcta cctgagctgt tcgctaacca tctcggtggt
     1801 cgtcaactgg ttcaacgtcc gcatgaaact ggtggagcgg tagatgtcgc tctcggatca
     1861 aggctcgacg ccttccatgg tcgaagcgac gacgagtgcg cgtctgtccg cgccacccga
     1921 agtaccaaaa ttggcaccgc gtgagtgggt gaaggagaac ctcttctcga gccccttcaa
     1981 ctccgtgctg accgtcgtca ccacaatcat cctgttggca at
//
LOCUS       DASCMR010000403         5295 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001940936, whole genome shotgun sequence.
ACCESSION   DASCMR010000403 DASCMR010000000
VERSION     DASCMR010000403.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5295)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5295)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5295
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001940936"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..243)
                     /locus_tag="QGG16_09245"
     CDS             complement(<1..243)
                     /locus_tag="QGG16_09245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25497.1"
                     /translation="MAGGLGFPWRAAPVPTGIEPPSPDHGLGADYDTGWARRYPARVA
                     RAAILESVMRPTMAVIASPARRGLDRLDDVDGPVVFV"
     gene            complement(300..1910)
                     /locus_tag="QGG16_09250"
     CDS             complement(300..1910)
                     /locus_tag="QGG16_09250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050043 - lactate racemase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lactate racemase domain-containing protein"
                     /protein_id="HJP25498.1"
                     /translation="MTGHLAPRPGFVLDVDRNSPPIVFHHGEGFRLERLPSDRSRVIY
                     PAEPLEGLPDPDGAIRHALLNPIGDSDPLPALLTAGMKLTIAFDDISLPLPPMRRPDI
                     RQRIIEAVLDLAAEAGVDDVHLIAALAIHRRMTEDELRHAVGDRVYDAFAPDGRLYNH
                     DAEDPDGMVVLGETPHGEDVQFSKRAAESDLLVYVNINLVAMDGGHKSTATGLSGYTG
                     LRHHHNVKTMQNSKSFMDRENSELHASNWRMGKVVRDAGVKIFQIETTVNNNTFGREG
                     PLALLQKREWEWSARDRMQFLGMKAGLEIMPTKTKRKVFSSWQAPYALTSVQAGEVEA
                     VHEVTTANVYRQQLVPVEGQTDILTMGLPYICPYNVNSIMNPILVMCLGLGYFFNLYK
                     GKPLVREGGVLIMSHPTPWEFNPIHHPSYIDFFEQVLADTTDPIEIERKYEKQFAEDE
                     WYIHLYRNSYAYHGVHPFYMWYWGSHALQHLGRVIIVGGDPAAVRRMGFQSASTLQDA
                     LEMASDVVGPQPTITHMKNPPILMADVT"
     gene            complement(1924..3147)
                     /locus_tag="QGG16_09255"
     CDS             complement(1924..3147)
                     /locus_tag="QGG16_09255"
                     /inference="COORDINATES: protein motif:HMM:NF012335.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HJP25499.1"
                     /translation="MKALQFRRNLPRYAAARVAGSITPGRGASAGPLKLVDLDTSRTP
                     GPDWVRVRPRLSGICGSDLATVDGRSARYFEPLVSFPFVPGHEVVGDLDNGSRVVLEP
                     VLGCVSRNLDPTCTPCAEGHLGNCEHTSFGDLGPGIQIGSCHDTGGGWSTAFNAHPSQ
                     LHPVPETLDDEAAVMVEPTACGVHAALMAEVPEGGVVAVLGAGTLGLVTLAALRAHAT
                     PGTVVATARYPEQRRQAAALGADQVVAPDEIRRAVRRITGSRAIGAPGLGETPTEGLV
                     DRLTGGADVVIDCVGSSSSLTDALAIVRPRGRIVLVGMPAEVSLELTPLWHREITLVG
                     AYTYGTETLPDGTERRTFDLAADLVGAASLGSLVSAPYPLARYRDALEHAASAGRRGA
                     TKIAFDLRDEKERLL"
     gene            complement(3144..>5295)
                     /locus_tag="QGG16_09260"
     CDS             complement(3144..>5295)
                     /locus_tag="QGG16_09260"
                     /inference="COORDINATES: protein motif:HMM:NF019605.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="HAD-IB family hydrolase"
                     /protein_id="HJP25500.1"
                     /translation="FDSLRDSLGPDGFAEMAARRITALAGDVTVDGLGLDDNGRAALA
                     ACDIVIHSAAAVSFDSPLDQAIEVNLLGPVRVVEALSELGVTPHVVTVSTCYVAGSRR
                     GAAPEEPVDASPFFVDVDWRTEVDAARRIRRETETTSRTPESLAEFRSKARGELGAAG
                     TPNLAAKTEQLRSRWVDDRMAESGVARASSLGFPDAYAYTKALGEIATAESRGAVPVS
                     VVRPAIIESAVADPSPGWIRGFRMAEPVIISYARGLLKEFPGVPEGTIDVIPVDFVVA
                     AICAVAARGPLAADGGPDIVQVASGSVNPLRYGTLVDQVREWFTEHPIYDDMGQPIPV
                     PEWSFPGRGRVKKQLQRAATMLDHAQKVFDVLPVRGRQALVGTRLEEQRELIQRAEGY
                     VDLYGAYAECEAEYGLDRLLALWDSLDDADQAAFAFDPRIIDWEAYVPDVHLPSVVKA
                     GRVPMKPPSRGGESRSARLRRQALAPERHLAAFDLENTLIASNVVASYAWLGSRRLRG
                     RDRVRFVAGLVAEAPALLSLDKKDRSDFLRHFYRRYDGAPVDQITIDATEKFSEMILA
                     KSFPAAIRRVREHRALGHRTLLITGALDFVVEPFRPLFDDIVCAELGVVDGKYDGQLT
                     SVPPTGEARYQALVDYSAAHGLDLSESVAYADSASDLPMLEAVGFPVAVNPETRLAGI
                     ARKRGWLVEDFQKSPGMYRSPLPLAPMRTVGTTR"
BASE COUNT          893 a         1621 c         1912 g          869 t
ORIGIN      
        1 cacaaacacc acaggtccat ccacgtcgtc aaggcggtcc agaccacgtc gggctggtga
       61 ggcaatcacg gccatggttg gacgcatcac cgattcgagg atggcggctc tggccacccg
      121 ggctggatac cgacgtgccc acccggtgtc gtagtcggcc cccaagccgt ggtcgggcga
      181 cggtggctcg ataccggtgg gcacgggcgc tgcacgccac gggaagccga ggccgcccgc
      241 catcgagcga gccttcgcca cagatcgggc cgcaaaactc attgggcggt tcccacgact
      301 caggtcacgt ctgccatcag gatgggtggg ttcttcatat gggtgatggt cggctgagga
      361 cccaccacgt cagatgccat ctccagggcg tcctgcagtg tcgacgccga ctggaagccc
      421 atgcggcgga cggccgccgg gtccccaccg acgatgatga cccgcccgag gtgctgcagg
      481 gcatggctgc cccagtacca catgtagaac gggtgcacac cgtggtaggc gtatgaattg
      541 cggtacaggt ggatgtacca ctcgtcctcg gcgaactgct tttcgtactt gcgctcgatc
      601 tctatcggat cggtggtatc ggccagcacc tgctcgaaga agtcgatgta gctcgggtgg
      661 tggatcgggt tgaactccca aggggtgggg tggctcatga tgagcacacc accttcccgc
      721 accagcggct tccccttgta gaggttgaag aagtacccga gcccgagaca catgacgaga
      781 atcgggttca tgatcgagtt gacgttgtac ggacagatat agggaaggcc catggtcagg
      841 atgtcggttt ggccttcgac gggtaccagt tgctggcggt acacgttggc tgtggtgacc
      901 tcgtggacgg cctcaacctc accggcctgc accgaggtga gggcgtaggg cgcctgccac
      961 gacgagaaga cctttcgctt ggtcttggtc ggcatgatct ccaggccggc cttcatgccg
     1021 aggaactgca tgcggtcacg ggccgaccac tcccattcgc gtttctggag gagagcgagc
     1081 gggccttccc ggccgaacgt gttgttgttg accgtcgtct cgatctggaa gatcttcacg
     1141 ccagcgtccc gaacaacttt gcccatccgc cagttggagg cgtgcagttc agagttctcg
     1201 cggtccatga acgatttcga gttttgcatg gtcttgacgt tgtggtggtg gcgcaggccg
     1261 gtgtagcccg ataggccggt ggccgtgctc ttgtggccgc cgtccatggc caccaggttg
     1321 atgttgacgt agacgagaag gtcgctttcg gcggcccgct tgctgaactg gacgtcctcg
     1381 ccgtgggggg tctcgccgag caccaccatg ccgtcgggat cctcggcatc gtggttgtag
     1441 aggcgaccat cgggggcgaa ggcgtcgtac acccggtcgc ccaccgcgtg gcgcagctcg
     1501 tcttcggtca tccgccggtg gatggccagg gcggcgatga ggtgtacgtc gtcgacaccg
     1561 gcctcggcgg ccaggtccag tacagcttcg atgatccgct ggcggatgtc aggccgccgc
     1621 atcggcggca ggggcaggga gatgtcgtcg aaggcaatgg tcagcttcat gcccgcggtc
     1681 agtagggccg gcaacgggtc cgaatcgccg atcgggttga ggagggcgtg gcggatggcg
     1741 ccgtccgggt cggggaggcc ctccaacggt tcggccggat agatgacacg ggagcggtcg
     1801 gacggcaacc tctcaagtcg gaagccctcg ccgtggtgga acacgatcgg cgggctgttg
     1861 cggtcgacgt cgagcacgaa acccggtcgg ggtgcgagat gtccggtcat gggaggtatc
     1921 cagtcacagg aggcgttcct tctcgtcgcg gaggtcaaag gcgatcttgg tcgcgccccg
     1981 gcgcccggcc gaggccgcat gctcaagggc gtcgcggtag cgggcaaggg gatagggggc
     2041 cgacacgagc gaaccaaggc tggcagcacc gacaaggtcg gcggccaggt cgaaggtgcg
     2101 gcgctcggta ccgtcaggaa gcgtctcggt gccgtacgtg taggcgccca caagggtgat
     2161 ctcgcggtgc cagaggggag tcagctcgag ggagacctca gcgggcatgc cgacgagcac
     2221 gatgcgaccc cttgggcgga cgatggccag cgcgtcggtg aggctggaag aggatccgac
     2281 gcagtcgatg accacgtcag cgccaccggt gagtcgatcc accaaccctt cggtaggggt
     2341 ctcgccgagc ccgggtgcgc cgatggcccg gcttccggtg atccgacgga cggcccgacg
     2401 gatctcatcg ggagcgacca cttggtctgc gcccagggcg gcggcctgtc gacgctgctc
     2461 ggggtagcgg gcggtagcca ccacggtgcc gggcgtcgcg tgcgcccgga gggcggccag
     2521 ggtgaccaag ccgagggtgc cggctcccag cacggctacc acgccgcctt cgggtacctc
     2581 ggccatcagt gcggcatgca ccccgcaggc cgtgggctca accatgacgg ccgcttcgtc
     2641 gtcgagggtc tcgggaacgg gatgcaactg gctggggtgg gcgttgaatg ccgtggacca
     2701 gccgccccca gtgtcgtggc aggaaccgat ctggatcccc ggtccgaggt cgccgaacga
     2761 agtgtgttcg cagttaccga ggtgcccctc cgcgcacggg gtgcacgtcg gatcgaggtt
     2821 tcggctgacg cagcccagaa ccggttccag gacgacccgg gagccattgt caaggtcgcc
     2881 gaccacctcg tggccgggga cgaacgggaa cgacacgagg ggttcgaagt agcgggccga
     2941 gcggccgtca acggtggcca gatctgagcc gcagatgcct gatagacgag ggcggacccg
     3001 cacccagtcg gggccgggcg tccgagaggt gtcgaggtcg acgagcttga ggggtccggc
     3061 ggacgctccc cggccgggcg tgatgctgcc ggccacgcgg gccgccgcgt agcggggcag
     3121 gttccggcgg aactgcaggg ccttcatctg gtagtgccca cggttcgcat cggggccagt
     3181 ggtaaaggac tgcggtacat gccgggcgac ttctggaagt cctcgacgag ccaaccccgc
     3241 ttccgggcga tgccggccag acgggtctcc gggttgacgg cgactgggaa gccaacggcc
     3301 tcgagcatcg gaaggtcgct ggccgaatcc gcataggcca ccgactcgct taggtccaga
     3361 ccatgggctg cggagtagtc gacgagggcc tggtagcgag cctcgccagt cggtggcacg
     3421 gaggtgagtt ggccgtcgta tttgccatcc accacgccca actcggcaca gacgatgtcg
     3481 tcgaagagcg ggcggaacgg ctcgacgacg aagtccaggg caccggtgat gagtagtgtg
     3541 cggtggccca gagcccggtg ctcgcgtacc cgacggatgg ccgccggaaa tgacttggcc
     3601 agaatcatct cgctgaactt ctcggtggcg tcgatagtga tctgatcgac gggggccccg
     3661 tcgtaccggc ggtagaagtg acgtaggaag tcgctgcgat ccttcttgtc gagcgacagc
     3721 agggcaggcg cctcggctac cagcccggcc acgaagcgga cccggtcgcg accacgtaga
     3781 cgtcggctac ccagccacgc atagctggca accacgttgg acgcgatgag agtgttctcc
     3841 agatcgaagg cggccaggtg gcgttctggg gccagggcct ggcggcgtag gcgggccgat
     3901 cggctctcgc cgccccggga cggtggcttc atggggaccc ggccggcctt gacgaccgat
     3961 gggaggtgga cgtcggggac gtaggcctcc cagtcgatga tcctggggtc gaaagcgaag
     4021 gccgcctggt cggcgtcgtc gagcgaatcc cagagggcta gtagccggtc cagtccgtat
     4081 tcggcctcgc actcggcgta ggcgccgtac aggtcgacgt agccctcagc ccgctggatc
     4141 agctctcgct gctcctcgag gcgggtgccc accagagctt ggcggccccg taccggtagg
     4201 acgtcgaaca ccttctgggc atggtcgagc atcgtggcgg cccgttgcaa ctgcttcttg
     4261 acccgtcccc ggccagggaa cgaccactcg ggcaccggga tgggctggcc catgtcgtcg
     4321 tagatggggt gttcggtgaa ccactcgcgc acctggtcga ccaaggtgcc gtagcgaagc
     4381 ggattgaccg aaccagaggc cacctggacg atgtcgggcc caccgtccgc tgccaggggc
     4441 ccgcgggcag ctaccgcgca gatggcggcc accacgaagt cgaccgggat gacgtcgatg
     4501 gttccttcgg gaacgccggg gaactccttc aggaggccac gggcgtacga gatgatgacc
     4561 ggctcggcca ttcggaagcc acggatccag ccgggtgatg ggtcggcaac ggccgattcg
     4621 atgatcgccg gacggaccac gctgacgggt acggcgcctc gggactcggc ggtggcgatc
     4681 tcgccgaggg ccttggtgta ggcgtaggcg tcggggaagc caagcgacga ggcacgggcg
     4741 acaccggatt cggccatgcg gtcgtcgacc catcgggatc gcagttgctc ggtcttggcg
     4801 gcaaggttgg gcgtaccggc agcaccgagt tcgccgcgag ccttggagcg gaactcggcg
     4861 aggctttccg gggtgcggct ggtcgtctcg gtttcgcgac gtatgcgacg tgcggcgtcg
     4921 acctcggtgc gccagtcgac gtcgacgaag aacgggctag cgtcgaccgg ctcctcaggg
     4981 gcggcaccgc gacggctgcc agccacataa caggtggaca cggtcaccac gtgtggggtc
     5041 acacccagct cggacagtgc ctcgacgact cggactggtc ccagcaggtt gacctcgatg
     5101 gcctggtcga gtggcgagtc gaagctcacc gcagcggccg aatggatgac gatgtcgcat
     5161 gcggcgagag cggcccggcc attgtcgtcc aggccgagtc cgtcgacggt gacgtcgcca
     5221 gccaatgccg tgatccgtcg ggcggccatt tcggcgaaac catcgggacc gagggaatca
     5281 cgcagtgagt caaag
//
LOCUS       DASCMR010000404         2936 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001940953, whole genome shotgun sequence.
ACCESSION   DASCMR010000404 DASCMR010000000
VERSION     DASCMR010000404.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2936)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2936)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2936
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001940953"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..808
                     /locus_tag="QGG16_09265"
     CDS             <1..808
                     /locus_tag="QGG16_09265"
                     /inference="COORDINATES: protein motif:HMM:NF016142.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HJP25501.1"
                     /translation="TALDCASRVRASGAVPATVAVIDGSLRVGLSVDEIERLGSGEAE
                     KASLRDLGHLLAEGRTGSTTVAATMFASHRAGIRVFATGGIGGVHRGDGQDISADLTA
                     LATTPVAVVCAGVKAVLDLPRTVEALETLGVPVVGQKTGVMPEFWTRGGDLPVSVRSD
                     RPTTTAGILHAHWGCGLLSGVVVANPIPVSDEADPQTIADAIAGGLAAADAAGVHGRD
                     VTPFLLAHIGQTTHGASLEANVALVKHNAAVAAEIAAALAALPTLGVGRN"
     gene            812..2440
                     /locus_tag="QGG16_09270"
     CDS             812..2440
                     /locus_tag="QGG16_09270"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF019581.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HJP25502.1"
                     /translation="MVNRYPEQGTIITGGPAYPLAKGGLGTVEAVRIDGGRITHVGSL
                     AGARALGDAQVVDLDGRSILPGFVDAHTHPLMHGQCASWADLTSAASIDEVVKLLGEH
                     ARTEARSIGPIRGFGYDHHRLAEGRHPTAVELDLVADNRTVTAMHVSGHGFSVNSHGL
                     AEAGITAAAPTPPGGVIDRDEDGRPTGRVFDAACDLLTGPDGVKLGNHGPNLHLPDDP
                     DDLASMLDDAQEAFLAAGITTVGDCQVTEREMRAFLAARDAGRLALRVVMYVLSSHVD
                     GLDRLGIESWLGNDRLSVGGVKHYADGALTGGTAYLPCGCGATHGHLYHGPGELEDLL
                     VASATAGRQTATHAQGPEAIQLVLDALGRAPLRPDLRHRIEHCGFPSADQLAEMYRLG
                     VVPVPQPTQVHLYGEGVRRDHPEVADGMYPSGRIAAAGLPVVLSSDAPVTRPCVMLSC
                     WAAETRLTSAGRVLGDENRITRAQSLTGYTVGGAHALRRDDVGSLAVGNPADLVLLAD
                     DPFTVAVDRLPDVAVLETWVDGHPAWTLIDGRTP"
     gene            complement(2490..2855)
                     /locus_tag="QGG16_09275"
     CDS             complement(2490..2855)
                     /locus_tag="QGG16_09275"
                     /inference="COORDINATES: protein motif:HMM:NF024375.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HJP25503.1"
                     /translation="MDPIGSAERRVANRFEAEFVPFIVDGEPSPGEWILQLDGSYPLG
                     GGFHVYRMDPGTRTTPHEHTCDEQFLMLEGELIDHDGHVYRPGDLVLLAAGTRHDSRT
                     ETGCTLAVFIATTEENLVD"
BASE COUNT          487 a         1025 c          953 g          471 t
ORIGIN      
        1 gacagcactg gactgtgcat ctcgcgttcg ggcctcaggt gccgtcccgg ccactgtggc
       61 cgtcatcgac ggatcactcc gggtcggcct ctcggtcgac gagattgagc gccttggcag
      121 tggggaggcc gagaaggcca gtcttcgcga cctgggacac ctgctggcgg aaggtcggac
      181 gggttccacc acggtggccg ccaccatgtt cgcttcccac cgggctggga tccgagtgtt
      241 cgccacgggt gggatcggtg gtgtacaccg cggtgatggt caggatattt cggctgacct
      301 caccgctcta gccacaacgc cggtggccgt ggtatgcgcc ggagtcaaag cggtcctcga
      361 cttgccccga accgttgaag ccttagagac gctcggagtc ccggttgtcg ggcagaaaac
      421 cggcgtgatg cccgagttct ggacccgggg cggcgaccta ccggtgtcgg tccgttctga
      481 ccgtccaaca accacggccg gcattcttca cgcccactgg ggttgcggtc tactcagcgg
      541 agtagtggta gctaatccca tccctgttag cgacgaggcc gacccacaga ccatcgctga
      601 tgccatcgcg ggtggtctgg ccgcagccga cgctgccgga gtacacggtc gcgacgtaac
      661 acccttcctg ctggcgcata tcggccagac cacccacggt gccagcctcg aggccaacgt
      721 ggcccttgtg aagcacaatg ccgctgtagc cgccgaaatc gccgctgcgc tggccgccct
      781 tccgaccctt ggcgtgggga gaaactaaga ggtggtcaac cgctatcccg agcagggcac
      841 gatcatcacc ggtggacctg cctatccgct cgcgaaaggc ggcctcggga ccgttgaggc
      901 ggtccggatc gacggtggcc ggattaccca cgtcggatcg ctggccggtg caagagccct
      961 cggcgacgct caggttgtcg acctagacgg ccgcagcatc ctcccgggct ttgtcgacgc
     1021 ccacacccac cctcttatgc acggccagtg cgcctcgtgg gccgacctga cctcggcggc
     1081 cagcatcgac gaggtggtca aactgctcgg agaacacgcc cgaaccgagg cccgctccat
     1141 aggtccgatt cgcggcttcg gctacgacca ccaccgcctg gccgagggtc ggcaccccac
     1201 agccgtggaa ctggacctgg tggctgacaa ccgaacggtc accgcaatgc acgtaagtgg
     1261 ccacggattc tcggtgaaca gtcacgggct ggccgaggcc ggtatcaccg cggcggcgcc
     1321 caccccgccc ggtggcgtca tcgaccgtga cgaggacgga cggcccaccg gtcgagtatt
     1381 cgacgccgcc tgtgacctgc tcaccggacc cgacggggta aaactcggaa accacggccc
     1441 caacctccac ctgccggacg acccggacga cctggccagc atgctggacg acgctcagga
     1501 ggcgttcctg gctgccggaa tcaccaccgt gggcgactgc caggtcaccg aacgggaaat
     1561 gcgggccttc ctggccgctc gggacgccgg gcgcctcgcg ttgcgcgtgg tgatgtacgt
     1621 cctgtccagt cacgtcgacg gcctggaccg cctggggatc gagtcgtggc tggggaacga
     1681 ccgcctgtcg gtcggcggag tcaagcacta cgccgacggt gccctgactg gaggcaccgc
     1741 ctacctaccg tgcggctgcg gggccaccca cgggcacctg taccacggtc cgggcgaact
     1801 ggaagacctg ctggtcgcct cggccactgc cggtcgtcag accgccactc acgcgcaagg
     1861 acctgaggcc atccaactgg tgctggacgc tctgggccgg gccccgctgc gccccgacct
     1921 ccggcaccgc atcgagcact gtggattccc gtctgccgac cagctagccg agatgtatcg
     1981 gctgggagtg gtcccggtcc cacagccaac ccaggtccac ctttacgggg agggtgtgcg
     2041 ccgcgaccac cccgaggtgg cagatggcat gtacccctca ggacggatcg ccgcggccgg
     2101 cctacccgtc gtgctgtcct cggacgcccc ggtaactagg ccatgcgtga tgctgtcctg
     2161 ctgggcagct gagacgcgtc tgacctccgc gggacgcgtc ctcggcgatg aaaaccggat
     2221 cacccgggca caatccctca ccggctacac ggtcggcgga gcccacgctc tgcggcgaga
     2281 cgacgtcggg tcactggccg tcgggaaccc cgccgacctc gtactcctgg ccgacgaccc
     2341 gttcactgtc gccgtcgacc gtctcccgga cgtagccgtc ctagagacct gggtcgacgg
     2401 ccatcccgcc tggaccctca tcgacggccg cacgccgtga agaccgccag cgtagaaaac
     2461 agctgaagag gaaccagcgg cggaaccggt cagtcgacca ggttctcctc tgtcgtagca
     2521 atgaagacgg cgagggtgca tccggtctcg gttctcgagt cgtgccgggt ccctgcggcc
     2581 agcagcacca gatctcccgg ccggtatacg tgaccgtcgt ggtcaatcag ctcgccctcc
     2641 agcatcagga actgctcgtc gcaggtgtgc tcgtggggtg tagtccgcgt gcccgggtcc
     2701 atgcggtaga cgtggaaacc gccccccagc gggtacgacc cgtcaagctg caggatccac
     2761 tcgccgggcg acggctcgcc gtcgacgatg aacgggacga actcggcctc gaaccggtta
     2821 gctacccggc gttcggcgga accgatgggg tccatgtgcg gcccctgcca ctccccgtgc
     2881 ccgtctacgg tcacgactct gcggccagat cggcgaggta ttgctgggtg aagtcc
//
LOCUS       DASCMR010000405         1627 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001941557, whole genome shotgun sequence.
ACCESSION   DASCMR010000405 DASCMR010000000
VERSION     DASCMR010000405.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1627)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1627)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1627
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001941557"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..595)
                     /gene="rsgA"
                     /locus_tag="QGG16_09280"
     CDS             complement(<1..595)
                     /gene="rsgA"
                     /locus_tag="QGG16_09280"
                     /inference="COORDINATES: protein motif:HMM:NF015170.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase RsgA"
                     /protein_id="HJP25504.1"
                     /translation="MDPDLLQAFGWTGGARPDDGRLGRIVRVDRGECDVVTDEGRLRV
                     LSDSQRSQDLLAPATGDWVVVVDDPELGPLISRVLDRANTVSRRDPSEAVIEQVLVAN
                     VDLVLIVHGLDRPLPPGRLERFLVVGWDSGAEVVVVLTKADREPEAAIEVAATVRALA
                     PDVEVLTVGMGRDYPGHEQVASLMTPGRTVVLLGESGA"
     gene            complement(630..>1627)
                     /locus_tag="QGG16_09285"
     CDS             complement(630..>1627)
                     /locus_tag="QGG16_09285"
                     /inference="COORDINATES: protein motif:HMM:NF024116.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HJP25505.1"
                     /translation="NASAGFGFGQDPVIEAAAVARVGRLPDVVAVTGTRQLSDIVTVP
                     FAGAEDYYRAFPVPVIATGPELPATLEVPMVSGRFLNAFDKQSSARVAVIGRDLADEY
                     GYLAGESRTIELNGLEYGVVGVLDWVLLEPSMDSAVFVTFAAAIADWDLDDPDPNRLY
                     VRAPTNTAMVAKEIPIVVSLGGPDGANASVPTDLLDAQSQVDESLNNLTKMMGGLALI
                     VGGVGIANVMSISVIQRSSEIGIRRALGHSRGTIAVQFLFEALVVGVFGGILGALVGA
                     GVVWGVAAQRGYTMVLSVTGLAGWALVSVGVAVVAGLYPSSKAARLEPLETLRLG"
BASE COUNT          323 a          601 c          478 g          225 t
ORIGIN      
        1 cggctcccga ctcccccaac agaaccacgg tgcgtcccgg cgtcatcaac gaggcgacct
       61 gttcatgccc tggatagtca cgccccatgc cgacggtcag aacctcgaca tcgggagcca
      121 gcgcccggac ggtggccgca acctcgatgg cggcctccgg ttctcgatcc gccttggtca
      181 ggaccacgac cacctcggct ccgctatccc aacccacgac caggaaccgc tcgagacgcc
      241 ccggcggaag gggccggtcc agtccatgca cgatgagtac cagatccacg ttggccacca
      301 ggacctgctc gatgaccgcc tcggacgggt cacggcgcga caccgtattg gcccggtcca
      361 gcacacgcga gatcagcgga cccaactcgg gatcgtcgac caccaccacc cagtcgccgg
      421 tggccggcgc cagcaggtcc tgagaacgtt gtgaatcaga gagcacccgg aggcgaccct
      481 cgtcagtcac cacgtcgcac tcgccccggt cgacccgcac gatccgaccc agacgaccgt
      541 catcggggcg cgctccgccg gtccagccga aggcttgtag gaggtcagga tccatcggga
      601 ccgatgctag ggccctcaat agggcgccat catccgaggc ggagggtctc caacggctcc
      661 agacgggcgg ccttggacga cggatagagg cccgccacca cggcaacgcc gaccgagacc
      721 agtgcccacc cggcgagtcc ggtcacgctg agcaccatgg tgtagcccct ttgggccgcc
      781 accccccaga ccacgccggc acctaccagc gccccgagga tccccccgaa cacccccacc
      841 acgagggcct cgaacaaaaa ctggacggcg atggtccctc gactgtgtcc gagggcccgc
      901 cggatcccaa tctccgaaga tcgctggatc accgagatgg acatcacatt ggcgatgccc
      961 acaccaccca cgatgagggc cagcccaccc atcatcttgg tcaggttgtt gagactctcg
     1021 tcaacctgcg actgagcgtc cagcagatcc gtggggaccg aggcattagc cccatccggc
     1081 ccgccgaggc tgaccacgat ggggatctcc ttagccacca tcgctgtatt ggtgggagcc
     1141 cggacgtaca gacgattcgg atcgggatcg tccagatccc agtcggcaat cgcagcagcg
     1201 aacgtcacga acaccgccga atccatcgac ggttccaaca gcacccagtc cagaaccccg
     1261 accaccccgt actccaagcc gttcaactca atggtgcgcg actcccccgc cagatagccg
     1321 tattcgtcgg ccagatctcg cccgataacg gccacccggg cgctggactg cttgtcaaag
     1381 gcgttcagga accgtcccga gaccatcggg acctccaggg tggcgggcag ttcggggccc
     1441 gtggctatca ccgggacggg gaaggcccgg tagtagtcct ccgctccggc aaacggcacg
     1501 gtcacgatgt cagacagttg acgggtgccg gtcaccgcca ccacgtcggg cagtcgcccg
     1561 acacgggcca cggcggcagc ctcgatgact gggtcctggc cgaatccgaa ccctgccgag
     1621 gcattga
//
LOCUS       DASCMR010000406         2446 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001942293, whole genome shotgun sequence.
ACCESSION   DASCMR010000406 DASCMR010000000
VERSION     DASCMR010000406.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2446)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2446)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2446
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001942293"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1176
                     /gene="argH"
                     /locus_tag="QGG16_09290"
     CDS             <1..1176
                     /gene="argH"
                     /locus_tag="QGG16_09290"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020376849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HJP25506.1"
                     /translation="LSDGSFTFVVSDEDIHTAVERRVTELAGEAGARLHTGRSRNDQV
                     ATDLRLWTLRELTDLSALVTSFQDTLASRADDAGEAYLPGYTHLQQAQPVLLAHQLLA
                     HGWALSRDVDRLLDARDRADVSPLGAGALAGSSLPLDPDSVAADLGFAARFENSLDAV
                     SDRDFVAEALFALALLGVHLSRIGEELVLWSTDEFGFVDLDDAFSTGSSMLPQKKNPD
                     IAELARGKAGRLVGHLTGLLTSLKGLPLAYNKDLQEDKEPLFDACDTIRLTLLALDGM
                     VSTLVFHTDRMAEAADSPYAAAIDLAEHLVAAGMPFRDAHAVVGALVRAALAGEGSLA
                     DLVAADERLGPEAADLLDPGTAVRRRTTPGGAGPGPVAIQRDRFSEQLAAQRTRLLA"
     gene            1179..1562
                     /locus_tag="QGG16_09295"
     CDS             1179..1562
                     /locus_tag="QGG16_09295"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF024675.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HJP25507.1"
                     /translation="MSYTQTIRVRYGEVDAQGVVFNAHYLAYLDDVSDTWLRAFDGNF
                     EETGWEIMLRRADLTWHGPAGVHDDLVVTAEVARWGTTSFDMAFEARVEDHLVLTATV
                     YYVGVSVGDHVPMPPPQAIRTHLGG"
     gene            1559..2167
                     /locus_tag="QGG16_09300"
     CDS             1559..2167
                     /locus_tag="QGG16_09300"
                     /inference="COORDINATES: protein motif:HMM:NF012514.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HJP25508.1"
                     /translation="MSGQREVDPGLFGGATAGISEMAGRSTPDLTDVVAAGPAGPDRD
                     RILNLLASHPDALSRSCRPGHLTGSALVVDPSDNRILVLFHTKLQRWLQPGGHADGDG
                     DLARVALREAVEETGISGLRLVEPPVDLDVHMVDPPSEDPHEHHDIRYLVVAPPGSVP
                     VGNHESEALKWVDRGDLVGMGADPGLIRLADRALSRLEELDI"
     gene            complement(2196..>2446)
                     /locus_tag="QGG16_09305"
     CDS             complement(2196..>2446)
                     /locus_tag="QGG16_09305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25509.1"
                     /translation="LVDDLGRIPGGTAHDRSLVALWLADWEIYLIDRANHAERLRTEG
                     DVKPLLPALPSGAGSVLERMNGFAQANDFEACLDPGDM"
BASE COUNT          389 a          823 c          823 g          411 t
ORIGIN      
        1 ctatccgacg gatcgttcac cttcgtggtg tccgacgagg acatccacac cgcggtcgaa
       61 cggcgggtca ccgaactggc tggagaggcg ggggcccgac tccacactgg tcggagccga
      121 aacgaccagg tggccaccga cctgcggctt tggaccctgc gggagttgac cgacctatcc
      181 gccctagtta cctcgttcca ggacacgctg gcctcccggg ccgacgacgc cggcgaggcg
      241 tacctgcctg gctacaccca cctccagcag gcccagccgg tccttctggc ccaccaactg
      301 ctcgcccacg ggtgggcact ttcccgggac gtggaccggc tcctggacgc ccgggaccgg
      361 gccgacgtct ccccgctggg ggccggagcc ctggctgggt cctcgctgcc ccttgacccc
      421 gacagcgtgg cggccgatct gggcttcgct gcccggtttg agaactcgtt ggatgcggtg
      481 agcgaccggg acttcgtggc cgaggcgctg ttcgccctcg ccctgcttgg ggtccacctg
      541 tcacggatcg gtgaggagtt ggtcctgtgg tccacagacg aattcggctt cgtcgacctc
      601 gacgacgcct tctcgaccgg ctcctccatg cttccccaga agaagaaccc tgacatcgct
      661 gagttggccc gtggcaaggc tggacgcctc gtcgggcacc taactggcct cctgaccagc
      721 ttgaagggac tcccgctggc ctacaacaag gacttgcagg aggacaagga accgctgttc
      781 gatgcttgcg acaccatccg gctcacgctg ctggccctgg acggcatggt gtccacgctg
      841 gtcttccata cagaccgcat ggccgaggcg gccgatagcc cgtacgcggc agccatcgac
      901 ctggccgagc acctggtggc cgcaggcatg ccatttaggg acgcccacgc cgtggtcgga
      961 gcgctagtcc gggccgccct ggccggcgag ggctcgctag ccgatctggt agccgccgac
     1021 gagcggctgg gccccgaggc ggctgaccta ctggatccgg gtaccgccgt tcggcggcgg
     1081 accacgccag ggggcgccgg accaggaccg gtggccatac aaagggaccg gttctctgag
     1141 cagctggctg cccaacggac ccgtttgttg gcctgaccgt gagctacaca cagaccatcc
     1201 gagtccgata tggcgaggtc gatgctcagg gcgtggtgtt caacgctcac tacctggctt
     1261 acctagacga cgtctccgac acctggcttc gcgcctttga tgggaacttc gaagagacag
     1321 gctgggagat aatgctgcgg cgggccgatc tgacctggca cgggccggcg ggcgtccacg
     1381 acgacctggt ggtcacggct gaggtggccc gctgggggac cacctcgttc gatatggcct
     1441 tcgaagcccg agtggaagac cacctggtgc tgaccgccac cgtgtactac gtcggggtgt
     1501 ctgtgggcga ccacgtgcca atgcccccgc cgcaagccat ccgcacccac ctgggcgggt
     1561 gagcggccaa cgggaagtcg atccggggtt gttcggggga gccaccgccg ggatcagcga
     1621 gatggccggg cggtctaccc ccgacctgac ggacgtcgtg gcggccggcc cggccggccc
     1681 ggatcgagac cgcattctga atctgctggc ctcgcacccc gacgccctat cccggagctg
     1741 tcgaccaggc cacctgaccg gctcggccct tgtcgtagat ccgtcggaca accgaatcct
     1801 cgtgctgttc cacaccaagc tgcagcgttg gttgcagccg ggtggccacg ccgacggcga
     1861 cggcgacctg gcccgcgtgg cactacgaga ggcggtcgag gagacgggaa tttccgggct
     1921 ccgactagtg gagccaccag tggatctcga cgtgcacatg gtcgatccac cgtctgagga
     1981 ccctcacgag caccatgaca tccgctatct ggtagtggcg cctccgggtt cggtgccggt
     2041 gggcaaccat gagtcggagg cgctcaaatg ggtggaccgg ggggatctgg tgggcatggg
     2101 agcagatccc ggactcatcc gtctcgctga ccgggccctg agccgcctcg aggaactcga
     2161 catctgagcg tcgggtcccg ggggttccag aagccctaca tgtctccggg gtcgaggcag
     2221 gcctcgaagt cgttcgcctg ggcgaaaccg ttcatacgtt ccagcacgct gcccgcgcca
     2281 ctggggaggg cgggaagcag gggtttcaca tctccctctg ttcggagtcg ctcggcgtgg
     2341 ttggcccggt caatgaggta gatctcccag tcggccaacc acagtgcgac cagtgatcgg
     2401 tcgtgggccg tgccgccggg gatccgaccg aggtcgtcga ccagtc
//
LOCUS       DASCMR010000407         1568 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001950438, whole genome shotgun sequence.
ACCESSION   DASCMR010000407 DASCMR010000000
VERSION     DASCMR010000407.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1568)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1568)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1568
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001950438"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..551)
                     /locus_tag="QGG16_09310"
     CDS             complement(<1..551)
                     /locus_tag="QGG16_09310"
                     /inference="COORDINATES: protein motif:HMM:NF012673.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HJP25510.1"
                     /translation="MADPDTLRDLALAIARAVAPAIGQQAGQVDVSATKSTSTDLVTE
                     VDRWSEAQIVSRILDDRPDDSILGEEGTGVTGNSGVRWVIDPIDGTTDFVYGHPGFSI
                     SIGVEVDENPVAGVIVDPLLGDEFCAAVGHGTTRNGESVQVSNVDELPRALVATGFSY
                     DAERRRRQAQVLVEVLPRVRDIRR"
     gene            complement(563..859)
                     /locus_tag="QGG16_09315"
     CDS             complement(563..859)
                     /locus_tag="QGG16_09315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25511.1"
                     /translation="MNEPRPVDDASAEPSTLARALALLAILAAGTCGGLVGHSVTDLQ
                     CAEGCPMLAGSMGLVGAVLAAAGVAVVAVLALRAMAEWETTERQRTARDRHPVD"
     gene            907..1500
                     /locus_tag="QGG16_09320"
     CDS             907..1500
                     /locus_tag="QGG16_09320"
                     /EC_number="3.6.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012514.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HJP25512.1"
                     /translation="MAEHEDPRKMWSTAGDPHRGDRKLQAREWVVVGGLLVIASERRK
                     GPEEILLVANRRRGGAVEWTPPGGVVDPGEVPLDALTREVAEETGLKVAGWTGPCYRV
                     RVDFPDREMTLDVVVHRAVSWSGVMSFDDPDGIVEDARFVDVGEVDALMATAPVWVSE
                     PLAAWLGDPVRDRCGEHGFTAWGLRAEDLVVERVVDQ"
BASE COUNT          244 a          484 c          564 g          276 t
ORIGIN      
        1 cgtcggatgt ctcgcacccg ggggagcacc tcgacgagca cctgggcctg gcgacgccgg
       61 cgctcggcgt cgtaggagaa gccggtggcc accagtgccc gcggtagttc gtccacgttg
      121 ctcacctgca ccgactcgcc gttgcgggtc gtgccgtggc cgaccgcagc gcagaactcg
      181 tcgccgagta gaggatccac gattactccg gcgactgggt tttcgtccac ttccacgccg
      241 atggagatgg agaagcctgg atggccgtac acgaagtccg tggttccgtc gatggggtcg
      301 atcacccaac gcaccccgga attcccggtc acgccagttc cttcctcgcc gaggatcgag
      361 tcatcgggcc ggtcgtcgag gatacggctg acgatctgcg cctcggacca gcgatcaacc
      421 tcggtcacca ggtcggtgga tgttgacttg gtggctgaca catccacctg tccggcctgc
      481 tgtccaattg cgggggcgac cgcccgcgct atcgctaggg caaggtcgcg gagcgtgtcg
      541 ggatcggcca cggtggggcg gatcagtcca ccgggtggcg gtctcgggcg gttcgttggc
      601 gttcggtggt ctcccactca gccatggccc gcaaggcgag cacggccacc acggcgacac
      661 cagccgccgc caggaccgcg ccgacgagtc ccattgaccc ggccagcatg gggcaaccct
      721 cggcgcattg caggtcggtc accgagtggc ccacgaggcc tccacaggtc ccggctgcca
      781 gaatggccag cagggccaac gcccgggcca acgtggacgg ttcggcggag gcgtcgtcga
      841 ctggtcgtgg ttcgttcacg gcccgaacgc taccggcccc cttcgggcgg ctgtcagact
      901 gcgacgatgg ccgaacacga ggacccccgg aagatgtggt cgacggctgg ggaccctcat
      961 cgtggagata ggaaactgca ggcccgggag tgggtcgtcg tcggtggcct cctggtgatc
     1021 gcttccgaaa ggcgcaaggg gcctgaggag attctgttgg tggccaaccg acgtcgtggt
     1081 ggtgccgtcg aatggacgcc tcccggcggg gtggtcgatc cgggtgaggt gccgctggac
     1141 gcactgaccc gtgaggtggc cgaggagaca gggctcaagg tcgctggatg gactgggccc
     1201 tgctaccgcg tgagggtgga cttccctgac cgcgagatga cgctggacgt agtggtccac
     1261 cgggccgttt cgtggtccgg ggtgatgtca ttcgacgacc cggatgggat cgtggaggac
     1321 gcccgatttg ttgatgtggg cgaggtagat gccctgatgg ctacggcgcc ggtatgggtg
     1381 agtgaaccct tagccgcttg gctgggcgat ccggttcgcg accgatgcgg cgagcacggt
     1441 ttcaccgcct ggggtctccg ggctgaggac cttgtcgtag agcgcgtggt cgaccagtag
     1501 ggaacgtgag caccgaaacc ccgatcctgc atgttgacat ggacgccttc ttcgcgtccg
     1561 ttgaggtg
//
LOCUS       DASCMR010000408         3219 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001952000, whole genome shotgun sequence.
ACCESSION   DASCMR010000408 DASCMR010000000
VERSION     DASCMR010000408.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3219)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3219)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3219
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001952000"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..948
                     /locus_tag="QGG16_09325"
     CDS             <1..948
                     /locus_tag="QGG16_09325"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:NF023227.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006261 - DNA-templated DNA replication
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HJP25513.1"
                     /translation="LSLDEAFLDVSGASRLHGSPEKVAAAIRNDLSESESLTCSVGVA
                     PNKFLAKLASGQAKPKAGLAGPVFGTGIAVVAADGVEAFLDPLPVQAVWGVGPRTFER
                     LERFGVRTVADLRGVPADTLVSALGRTVGSQLWRLARGIDDRTVEPEQVTKSIGHEET
                     FARDLADPLEIRRHLVRMVDAVARRARSTGVAGRTVSVKLRYPDFTTMGRSHTLADPT
                     DLAVEILEVATGLVDSVDTTPGIRLLGVSLGNLQDGSVRQLRFNDIEVAEGRAPGWRA
                     AEGAVDEIRERFGNSAIGPAVADELGPKEIGDSQWGPDV"
     gene            1018..1416
                     /locus_tag="QGG16_09330"
     CDS             1018..1416
                     /locus_tag="QGG16_09330"
                     /inference="COORDINATES: protein motif:HMM:NF022684.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3040 domain-containing protein"
                     /protein_id="HJP25514.1"
                     /translation="MPLSEEEERILSEMEERLIETDPRLVREVSETTVYTQPLRSMKW
                     AVGGFVAGVTLMVATLSTSYMLAFVGFLVMLGSALRLERDARQVGRTGLRQVADSGRT
                     ASLRDAVGGTRARARDRMRDRFRRGEGGRI"
     gene            1443..2378
                     /locus_tag="QGG16_09335"
     CDS             1443..2378
                     /locus_tag="QGG16_09335"
                     /inference="COORDINATES: protein motif:HMM:NF012692.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HJP25515.1"
                     /translation="MLAIDVGGTKLAAGLVDGDGRLIDQRQSATVAFADVDADPGPVP
                     LDGEQTIDGTFEALWSIVEPFVDRADAVGVGCGGPMAGGPGDRRMSPLHIPLWDDLPL
                     AGLLAERSGLDVVVDNDAKALALGEGWCGAAAGHRNFLAMVVSTGVGGGIVLDGRLVD
                     GATDNAGHIGHLVVDPGGPDCACGSRGCLEAVASGTAIALATGAPAAEASDEVRRRVG
                     MMVGRGVADVVNLLDLPLVVVAGSVALGFGAPFFDAAEEALRERCGLSFTRGARIVPA
                     GLGADGPLVGAAAVWHHHRGDGVLSNAPPLGEDCN"
     gene            2378..2629
                     /locus_tag="QGG16_09340"
     CDS             2378..2629
                     /locus_tag="QGG16_09340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25516.1"
                     /translation="MGVRWFARIAAAVAVRPVLWGVALRQAHRLADRHWWRRPPFLPV
                     PARAYAAFRTTTQYGDPTAAPSVHDVIVWLQWVRRFPGD"
     gene            2630..>3219
                     /locus_tag="QGG16_09345"
     CDS             2630..>3219
                     /locus_tag="QGG16_09345"
                     /inference="COORDINATES: protein motif:HMM:NF015084.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25517.1"
                     /translation="MTGWNVRWPVGSVADRHGPVGEISERSVLRHRVSHSTVVLGSGQ
                     RAPSGLVDRATAKGLDVVRRRSGGGAVLLEHDGLLWVDVLVPRNDPLWNDDVGRSSMW
                     LGAAWSEALAVSGVVTDVHRGSFCCGLAGRAVCFVSRAAGEVVSQGRKVVGISQRRDR
                     SGARFQCAVLLGADAATRSVAPLIDLLGLVPRAELLA"
BASE COUNT          439 a          944 c         1217 g          619 t
ORIGIN      
        1 ctctctctgg atgaagcgtt cctagacgtg tcgggcgcca gtcggctcca cgggtctccg
       61 gagaaggtag cggcagccat caggaacgac ctctcggaga gtgagtcgtt gacctgcagt
      121 gtcggtgtag ccccgaacaa gtttctggcc aagttggcca gcgggcaggc caagccgaag
      181 gccggtctcg ctggccccgt gttcggaacc ggcattgcgg tggtggcggc cgacggggtg
      241 gaggcgtttc tagatccact tcccgttcag gccgtgtggg gggtcggtcc gcgtaccttc
      301 gagcgtctgg aacggtttgg ggttcgaacg gtggcagacc tccggggcgt accggccgac
      361 acgctggtct cagcgctggg ccggacggtg ggcagccaac tctggcgtct cgcccgtgga
      421 atcgatgatc gcacggtgga acccgagcag gtcaccaagt cgatcgggca cgaggagaca
      481 tttgccaggg acctagccga cccgctggag attcgccgcc acctcgttcg tatggtggac
      541 gcggtggccc gtcgggcccg ctccacaggg gtggccggac gcacggtgtc ggtgaaactg
      601 cgctacccgg acttcaccac gatgggccgt agccacacgc ttgccgaccc gaccgacctg
      661 gccgtggaga tcctcgaggt ggccaccgga ctggtggatt cagtggacac caccccgggg
      721 atccgtcttc tcggggtttc gcttggcaat ctccaggacg gttcggtccg tcaactccgc
      781 ttcaatgaca tcgaggtcgc ggagggacgg gcgcccggtt ggcgggccgc cgagggagct
      841 gtggatgaga tccgggagcg cttcgggaac agtgccattg gaccggcggt agctgacgaa
      901 ctgggaccta aggagatcgg tgacagccag tgggggcccg acgtctgacc cgtcggttcc
      961 ccgttttcga tgagcgggcg cgttgccgct cgcgcgccgc tgtgcgatgc ttgaggggtg
     1021 ccactttccg aggaagagga acgcatcctc agcgagatgg aggaacgtct cattgagacg
     1081 gatccccgtc tggtccgcga ggtgagcgag acgacggtct atacccagcc gttgcggtcc
     1141 atgaagtggg cggttggtgg attcgtagct ggggtcaccc tgatggtggc gaccctttcg
     1201 acgtcgtaca tgctggcctt tgtgggcttt ttggtcatgt tgggttcggc acttcgtctc
     1261 gaacgcgacg cccgacaggt cggccgtacc ggtctgcgac aggtcgccga ttccggccgt
     1321 actgcctcct tgcgcgatgc ggtaggcgga acccgggctc gggcccgcga tcggatgcgt
     1381 gaccgtttcc ggcgcggtga gggtggccgg atctgaccag aggagccgac cgccgaccca
     1441 cggtgctggc catcgacgtg ggtgggacca agttggctgc gggtctggtg gacggcgatg
     1501 gtcggctgat cgaccaacgc cagagcgcaa ccgtcgcgtt tgccgatgtc gacgctgacc
     1561 ctggtcccgt acctctggac ggtgaacaaa cgatcgacgg caccttcgaa gcgctctggt
     1621 ccatagtcga acctttcgtc gaccgcgctg atgcagtcgg cgtgggatgc ggcggcccga
     1681 tggcgggtgg gccgggtgac cgacggatgt ccccgttgca cattcccctg tgggacgacc
     1741 ttccgttggc gggcctgttg gccgagcggt ccgggctgga cgtcgtggtc gacaatgacg
     1801 ccaaggcgtt ggctcttggt gagggctggt gcggggcggc ggccggccac cggaacttcc
     1861 tggcgatggt tgtctcgacc ggcgtcggtg gggggatcgt gctcgacggt cgcctggtcg
     1921 atggcgccac cgacaacgct ggccatatcg gccacctcgt ggtggacccc ggcggcccgg
     1981 attgtgcctg cgggtcccgg ggttgcctcg aggcagtggc gtcggggacg gcgattgctc
     2041 tggccaccgg tgcacctgcc gccgaggcct cggacgaggt tcgtcgtcgg gttgggatga
     2101 tggtgggtcg gggagtagcc gacgtggtga acctgctcga cctcccattg gtagtggtag
     2161 ccggttcggt ggctctcggc ttcggcgccc ccttttttga tgcggccgag gaggcgcttc
     2221 gtgagaggtg tggtctgtcc ttcacccggg gtgcgcgcat cgtgccggcc ggactggggg
     2281 ccgacggccc gttggtgggg gcggcggcag tgtggcacca ccaccgtggc gacggtgtgc
     2341 tttccaacgc ccctcccttg ggggaggatt gcaactgatg ggcgttcggt ggtttgcacg
     2401 gatagcggcg gcggtagcgg tgcgccccgt cttgtggggc gtggcccttc ggcaggccca
     2461 ccgtctggct gatcggcact ggtggcggcg tcccccgttc cttccagtac cggctcgggc
     2521 ctatgcggcc tttcggacga ccacgcagta cggcgatccg acggcggcgc cgtcggttca
     2581 cgacgtcatc gtgtggctgc aatgggttcg acgcttcccg ggtgactgaa tgaccggatg
     2641 gaacgtgcgt tggccggtgg gctcggtggc tgaccgacac ggaccggtgg gagagatctc
     2701 tgagcggtcg gtactgcgtc accgggtgtc ccactcaact gtggtgctgg ggagcggcca
     2761 acgggcgcct tccgggctgg tcgatcgagc aaccgcgaag ggtttggacg tggtccgacg
     2821 ccggtcaggc gggggagcgg tcctgttgga acacgacgga ctcctctggg tcgatgtgct
     2881 ggtgccacgg aatgatccat tgtggaatga cgacgtggga cggtcgtcca tgtggttggg
     2941 agctgcctgg tccgaggcgt tggccgtatc gggcgtggtg accgatgtcc atcgaggctc
     3001 gttctgttgc gggttggccg gccgggccgt gtgcttcgtg agccgggccg ccggtgaggt
     3061 ggtgtcccaa ggtcgcaagg tggtggggat cagccagcgg cgggaccgga gcggagcccg
     3121 gttccagtgt gcggtgctgc tgggggccga tgccgcaacg cgatcggtgg cccctctgat
     3181 cgacttgctc ggcctagtgc cacgtgcgga gttgctggc
//
LOCUS       DASCMR010000409         3414 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001955193, whole genome shotgun sequence.
ACCESSION   DASCMR010000409 DASCMR010000000
VERSION     DASCMR010000409.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3414)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3414)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3414
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001955193"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            268..1215
                     /locus_tag="QGG16_09350"
     CDS             268..1215
                     /locus_tag="QGG16_09350"
                     /inference="COORDINATES: protein motif:HMM:NF015431.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HJP25518.1"
                     /translation="MNQITTHQSGASGPTSRTGDLPSIQGLNTFAIVARHESFSSAAD
                     ELEIGQSAISHAIRQLERWFGCALFDRDHRGIRLTAEGRILADGVGAGLARVHQAVRD
                     VQYLHDHLTEVVTISVSTATASNWLIPRLTRFKADHPEIDVRCVTTDSDRNFDTGSVD
                     LFIPVGRARWPGCQRWALTDETVYPVCSPEYAASVGPMPWTSDQLMGADLLALQERHR
                     SRMRWSEWLAAAGSGVLGGAGQGITNDYSVLLHAAMEGQGVALGWHHLVSDLVAQGRL
                     VRPMAEAVTTDEPLWLNAPPGRSLDSATELLRDWLLDHA"
     gene            1253..1891
                     /gene="upp"
                     /locus_tag="QGG16_09355"
     CDS             1253..1891
                     /gene="upp"
                     /locus_tag="QGG16_09355"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014471148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004845 - uracil phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HJP25519.1"
                     /translation="MNEPAISGLHVIDHPLVAHKLTQMRRVETPSGQFRSLLTEISLL
                     LAYEVTRDLELRNVRITTPMTETDQPELVEDPVVVSILRAGNGLLDGVLQVIPSARVG
                     HVGLYRDHDTLEAVEYYCKFPPLKGRTIIVVDPMLATGNSAAAALDRIKLDGPASIRF
                     LCLLAAPEGIEALQVAHPDVAIWTASVDECLNEVGYIVPGLGDAGDRIFGTT"
     gene            1946..2995
                     /locus_tag="QGG16_09360"
     CDS             1946..2995
                     /locus_tag="QGG16_09360"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013672.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HJP25520.1"
                     /translation="MLILMAFGLMAALTTGPARAAPTGLVDVGEVEDTGAEIGGADGH
                     PTSRDPGVVYLTFDDGPDQLFTPILLDLLDRHGARATFFLLGRNLAARWGSDEVQDLL
                     NRGHAVGNHSTHHRKLTEQDPWSVAADLEEASLLLADRTGFRPSCWRAPYGDLNEMVH
                     SVAGSLDMTHVGWTADPQEWLNPWVPVVVDYLTRKRRDGAVVLLHDRKWLSLHIVDDL
                     LPVFHDDGWRFDALPTCRAPGEREARMATRGSDATPVGRVDRVATVGAVLEVTGWAYD
                     ADAPRGGLDIRVSVGDPDQEAPTTTASRTGSDHDFIVHLDEVPDALICVWAVDAGRRQ
                     DASLGCHRPEIAPEG"
     gene            3018..>3414
                     /locus_tag="QGG16_09365"
     CDS             3018..>3414
                     /locus_tag="QGG16_09365"
                     /inference="COORDINATES: protein motif:HMM:NF013702.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid acyltransferase family protein"
                     /protein_id="HJP25521.1"
                     /translation="MTRQFPNGPPVDEATALLSVQHRVARAMSLVTRLEIGPPPDVTP
                     GPVIHAANHRSLADLLLAANTFSRWGWPIRPLVAGSYFKRAGIGWLLKRLRCIPVDGT
                     EALELATDALHQGWSVAIMPEGRIVPEAEW"
BASE COUNT          595 a         1099 c         1107 g          613 t
ORIGIN      
        1 gcgaagacgc actcttgttc gtcggcgaag aaggactcgt cgacgtaaca gtcggccggg
       61 agcgcgtggg cctcgtggac gggacgccga gtcccgaccc atgcctcctc ggtggtccat
      121 cgggactccg ggacgaaatc caactgttcg gtgaaagtgg tcataaatca taaagagtcg
      181 cattcttgat catctgtcca cggcgacaac ggcgcgacgg tacgcccggt ttcactctgt
      241 gtaaagcatg agtaatctca tgggaccatg aatcagatca ctacccacca gtccggcgca
      301 agcggcccga catcaaggac cggagacctc ccgtcgatcc aaggactgaa cacgttcgcc
      361 atagtggcac gacatgaaag tttctctagc gcggcagacg aactagagat cggccagtcg
      421 gcgatcagcc acgccatccg ccagttggaa cgatggttcg gttgcgccct gttcgatcga
      481 gaccaccggg ggatacgcct caccgcagag ggtcggatcc tggctgacgg cgtgggtgcc
      541 ggtctggccc gtgtccacca agcggtccga gacgtccaat acctccacga ccacctcacc
      601 gaggtggtga ccatctcggt atccacggcc acggccagca actggctgat tccccgtctg
      661 acccgattca aggccgatca cccggagatc gacgtgcgat gtgtcaccac ggattcggat
      721 cgcaattttg acaccggatc ggtcgacctg ttcatcccag ttggtcgggc ccgttggccg
      781 ggctgccaac gatgggccct gaccgacgag accgtctatc cggtctgcag cccggagtac
      841 gccgcatccg tcgggccgat gccgtggaca tccgatcagt tgatgggagc ggaccttctg
      901 gcgcttcagg aacgacaccg atcccggatg cgatggtccg agtggttagc cgccgccggc
      961 tccggtgtgc tgggcggggc aggtcaaggc atcaccaatg actactcggt actgctccac
     1021 gccgccatgg aggggcaggg ggttgccctt ggatggcacc acctggtgtc cgacctggta
     1081 gcgcaggggc gcctcgtgcg accgatggct gaggcggtca ccactgacga gccgttgtgg
     1141 ctgaacgcac cgccgggccg ctccctcgac tccgccactg aactgctgcg cgactggctg
     1201 ctcgaccacg cttgaggaag tgccggctgg ggggccgacc tagggtgcgg ccatgaatga
     1261 acccgccatc tccggcctgc atgtcatcga ccatccgctg gtggcccaca agctcaccca
     1321 gatgcgacgg gtcgagacgc ccagtgggca gttccgatcc ctgctgaccg agatcagtct
     1381 cctcttggct tacgaggtga cacgtgacct cgagctacga aacgtccgga tcaccacgcc
     1441 gatgaccgaa accgatcagc cggaactggt cgaggatccg gtggtggtgt cgatcctccg
     1501 ggccggcaac gggctactcg acggcgtgct ccaggtgatc ccttcggccc gggtaggcca
     1561 tgtcggcctc tatagggacc acgacaccct cgaagctgtc gagtactact gcaagttccc
     1621 tccgctgaaa ggccgaacga tcatcgtggt cgaccccatg ttggccaccg gcaactcagc
     1681 cgccgctgcc ctcgaccgga taaagctcga cgggccggcg tcgattcggt ttctgtgcct
     1741 cctggcagcc ccggagggca tcgaggctct tcaggtcgcc catcccgacg tggccatctg
     1801 gacggcatcg gtcgacgaat gtctaaacga ggttggctac atcgttcccg ggcttggaga
     1861 cgccggtgac cggatcttcg ggacgacttg attcggggtt gtttcggtga aacaagttca
     1921 cgttggcggc cggctgggtg ccgccgtgct gatcctgatg gccttcggcc tgatggctgc
     1981 cctgaccact ggaccggcgc gagcggcccc gactggtctg gtggatgtcg gtgaagtgga
     2041 ggacaccggg gccgagatcg gtggggccga cggccacccg accagccgag accccggggt
     2101 cgtctacctg actttcgacg acggtcccga ccaactcttc accccgatcc tgctggacct
     2161 gctggatcgg cacggcgccc gcgccacctt cttcctcctg ggacggaacc tggcagcccg
     2221 gtgggggagt gacgaggttc aggacctgtt gaaccggggg catgcggtcg gcaatcactc
     2281 cactcaccac cggaagttga ccgaacagga tccatggagc gtggccgctg atctcgagga
     2341 agcgtcgctt ctactggccg accggactgg attccgaccc tcgtgctggc gtgcgcccta
     2401 cggcgacctt aacgagatgg tccactcggt ggccggttcg ctggacatga cccatgtcgg
     2461 ctggactgcc gatccacagg agtggctcaa cccctgggta ccagtagttg ttgactactt
     2521 gacccgaaag cggcgcgacg gtgcggtggt gttgcttcac gaccggaagt ggctgtcgct
     2581 ccacatcgtg gacgacctgc taccggtatt ccacgacgac ggatggaggt tcgatgcctt
     2641 gccgacttgt cgtgccccgg gggaacgtga agcccggatg gcgacccggg ggagcgatgc
     2701 cacgccggtt ggccgggtgg atcgggtagc gaccgtcggt gctgtcctgg aggtcacggg
     2761 ttgggcttac gacgccgacg ccccgagggg cggtctggac atccgcgtga gtgtgggcga
     2821 ccccgaccag gaggcaccga ccacgacggc gtcccggaca ggatcagacc acgacttcat
     2881 cgttcacctg gacgaggttc ccgacgccct aatttgcgtg tgggcggttg acgccggacg
     2941 acgacaggac gcttcccttg gttgtcatcg ccccgagatc gcccccgagg ggtgatgaca
     3001 cccgtaccct ccgtcgggtg acacggcagt ttcccaacgg gccacccgta gacgaggcaa
     3061 cggccctcct gtccgttcag caccgggtgg cccgcgccat gagcttggtg acccggctcg
     3121 agatcgggcc cccacccgat gtcacgcccg gtccggtcat ccacgcagcc aaccaccgga
     3181 gtctggctga cctcctcctg gcggccaata cattcagccg ttggggatgg cccatccgcc
     3241 ccctggtggc cggctcgtac ttcaagcggg cgggcatcgg ttggctgctc aagcgtctac
     3301 gttgcattcc agtcgatggc acggaagcgc tggagctggc caccgatgcg ctgcaccagg
     3361 gatggtcggt ggcgattatg ccggagggtc ggatcgtgcc cgaagcggaa tggg
//
LOCUS       DASCMR010000410         1732 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001960555, whole genome shotgun sequence.
ACCESSION   DASCMR010000410 DASCMR010000000
VERSION     DASCMR010000410.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1732)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1732)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1732
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001960555"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..291
                     /locus_tag="QGG16_09370"
     CDS             <1..291
                     /locus_tag="QGG16_09370"
                     /inference="COORDINATES: protein motif:HMM:NF015995.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter
                     substrate-binding protein"
                     /protein_id="HJP25522.1"
                     /translation="EFPTFADECRTDASWGLNPETTHDCGNPKDGYLKLGVWSGFPDK
                     WPNAYEVVQRMNFTNLDIAQLAMYVDIDGMEPEDAASLWLADNVDRVNAWVG"
     gene            446..1456
                     /locus_tag="QGG16_09375"
     CDS             446..1456
                     /locus_tag="QGG16_09375"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     ATP-binding protein"
                     /protein_id="HJP25523.1"
                     /translation="MTKPKIVCRNVWKLYGPEPEKFLASHDGEPDLATIKESGYIPAV
                     RNASLEINEGELVVLMGLSGSGKSTLVRCMSRLIEPTAGEIDFDGEDLRAASERELVE
                     LRRHKMGMVFQHFALFPHRTVLENVAFPLEVQGVDLAIRNARALEIIDLVGLHGRGNY
                     YPRELSGGQQQRVGIGRSLAVEPDVWFLDEPFSALDALIRRDMQDEFLRLQSTLQKTI
                     IFITHDFDEAIRLADRIAIMRDGVIDQLGTAEELITNPGSDYVAAFTKNVSRAKLLRV
                     HTLMGPPSDSADGEVDGRVFVSSAANQILSSTVPVRVVEDGEVVGSITAAQVTEALFE
                     AE"
     gene            1467..>1732
                     /locus_tag="QGG16_09380"
     CDS             1467..>1732
                     /locus_tag="QGG16_09380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25524.1"
                     /translation="MTDQTTSEPLDTSDAASADGPAKQLSGRQKAAIAFGPFLILWFT
                     WWRLGSHHITRTGKYEGESAALEWLYRVPRTWTVDWFNFAGRDG"
BASE COUNT          346 a          555 c          510 g          321 t
ORIGIN      
        1 gagttcccga cgtttgctga cgagtgccgg accgatgcct cttggggcct caacccggag
       61 acgacgcacg actgtggcaa cccgaaggac ggctatctca agctcggcgt gtggtccgga
      121 ttcccggaca agtggccgaa cgcctacgag gtcgtacaga ggatgaactt caccaacttg
      181 gacattgccc agttggccat gtacgtcgac atcgacggca tggagcctga agatgccgct
      241 tccttgtggc tcgccgacaa cgttgaccgg gtgaacgcct gggttggcta gtcgccatga
      301 gacgcgatgc ctaatggtgt cgtaatgtcg ggccggttgc cggggcccac cccctcggca
      361 accggcccga cgtcgtcatg actgaagtcc taacccgcat acccaccctg acaacgggac
      421 taaggtctcg gcgaggcccg acacgatgac caaacccaag atcgtttgcc gtaacgtctg
      481 gaagctctac gggcccgaac ctgagaagtt cctggcctcc cacgatggcg agccagatct
      541 cgcgacgatc aaggaaagcg gctacatccc agccgttcgg aacgcttcac tagaaatcaa
      601 cgagggcgaa ctcgtcgtcc tgatgggcct tagcggctct ggcaaatcca ccctcgtccg
      661 ctgcatgtct cgcctcatcg agccgaccgc cggtgagatc gacttcgacg gcgaggacct
      721 gcgtgccgcc tctgaacggg agttggtcga acttcgccga cacaagatgg gcatggtgtt
      781 ccagcacttc gcacttttcc cgcaccgcac ggtgctggaa aatgttgcct tcccgctcga
      841 ggtgcaggga gtggacctcg ccatccgaaa cgctcgggcc ctcgagatca tcgacctcgt
      901 cggattgcac ggacgtggca actactaccc gagagagctc tccggtggac agcagcagcg
      961 cgtaggcatc ggccgctctc tggccgtgga gcccgacgtc tggttcctcg acgagccgtt
     1021 ctccgccttg gacgccctca ttcggcgcga catgcaggat gagtttcttc gtctccagtc
     1081 aactttgcaa aaaacgatca tcttcatcac gcacgacttc gacgaggcca tccgtcttgc
     1141 cgacaggatc gccatcatgc gtgacggggt aattgaccag ctgggcactg cagaggagtt
     1201 gatcaccaac ccgggctcgg actacgtcgc agcgttcacg aagaacgtct cccgagccaa
     1261 gttgcttcgt gtccacaccc tgatgggtcc cccatcggat agcgctgacg gcgaggtcga
     1321 cggacgcgtg tttgtctcat cagcagccaa ccagatcctc agttccacgg tcccggtgag
     1381 ggtggtcgaa gacggggagg ttgtcggctc gatcaccgca gcgcaggtga ccgaagcgct
     1441 ctttgaggcc gagtgatcac caggccatga ccgatcagac cacatccgag cccctcgaca
     1501 cctccgacgc ggcgtcggcc gacggaccag caaaacaact atccggccga caaaaggcgg
     1561 caatcgcctt cggaccgttc ctgatcctgt ggttcacctg gtggcggctt gggtcgcacc
     1621 acatcacccg aaccggcaaa tacgaaggtg agtcagcagc gctcgaatgg ctctaccggg
     1681 ttccgcggac ctggaccgtc gactggttca actttgcggg ccgggacggc tt
//
LOCUS       DASCMR010000411        11918 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001960964, whole genome shotgun sequence.
ACCESSION   DASCMR010000411 DASCMR010000000
VERSION     DASCMR010000411.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 11918)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11918)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11918
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001960964"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            364..1620
                     /gene="nhaA"
                     /locus_tag="QGG16_09385"
     CDS             364..1620
                     /gene="nhaA"
                     /locus_tag="QGG16_09385"
                     /inference="COORDINATES: protein motif:HMM:NF018648.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015385 - sodium:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006814 - sodium ion transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HJP25525.1"
                     /translation="MRFLGIEAAGGILLMVATVAALFWANSPWSGSYHDFWHTEVHLG
                     IGDLRLEHHGHPLTLVQLVNDALMAIFFFVVGLEIKRELVTGHLRDRRAALLPAAGAL
                     GGMVVPALIYFAFNSSGDASAGWGIPMATDIAFAVGVLSLLGNRISTPLKVFLLSLAI
                     VDDIGAILVIAVFYTSDLAGEWLVLAVAATVAVVLLTRFKVWYTPLYIVLGSVLWYAM
                     FRSGVHATIAGVIMGLLAPAGVLLQPGEVAPIDVGSLNADGLREAKFRMNESVSVASR
                     LEHQLHPITGFIIIPVFALANAGIEISGDSLRDALGSGVTIGVAIGLVVGKAVGVSLF
                     TMGAVRLGISALPSGATIRHIVGISTIAGIGFTVSLFVTGLAFDDLAIQDEAKVGILL
                     ASMVAALGGVAILLGARSTDEGATHG"
     gene            1613..4738
                     /gene="topA"
                     /locus_tag="QGG16_09390"
     CDS             1613..4738
                     /gene="topA"
                     /locus_tag="QGG16_09390"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003917 - DNA topoisomerase type I (single
                     strand cut, ATP-independent) activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HJP25526.1"
                     /translation="MGDALVIVESPAKAKTIAGYLGDGFVVESSIGHVRDLPMRASDV
                     PAAYKGEPWAKTGVDVDNDFKPLYVVNADKKQQMANLKRLLKKADVLYLATDEDREGE
                     AIAWHLLEVLNPKVPVHRMVFHEITKGAITEALDNTRELDRRLVDAQETRRILDRLYG
                     YELSPVLWRMIGAGLSAGRVQSVATRMIVERERDRMAFNSADYWDLNCAMATRVSQGT
                     GAGFTARLLEVDGRRVALGRDFGDDGHPPRADVLVLDETSAGAVRDDLEGRPATVEAV
                     EPKPYRRRPSAPFTTSTFQQEAGRRLRLSASRAMHAAQGLYQKGYITYMRTDSTTLSD
                     TAVRAARTEATERFGSDHVPDAPRTYANKVRNAQEAHEAIRPAGDRFRHPDTVRGELP
                     KSEADVYELVWRRTVASQMTDATGETVRLRMGADLASGTGVDGVGSRATLAASGTVIQ
                     HQGFRRAYEETRDESPRRGAEATDDDDGDATELVLPAVTVGEVIDVVSATAEGHTTQP
                     PARYTEASLVKGMEEHGVGRPSTYASIMETIQRKYVFKKGTALVPTLSAFAVTNLLEQ
                     HFPRLVDYDFTAGMEDDLDDIANGEAESVPWLHAFYFGSDADIGLHAKVTTRLGEIDP
                     RGVSTVELGATPDGEPVVARFGKFGPYVQVGDETASIPDDVPPDELTVARALEFLHAP
                     ADRELGTDPDTGLVVVARSGRFGPYVSLGRPPERPAPSSPAGRLMALPGNRKEIGVAL
                     GYLRLAAGRLDLAAAKKVLNVPARGVSALALKKVVEATEVGLPVLEVLRDTEALGLSA
                     KACAGIEAFLSLGEQLAGLRSEGPRAVIEAALESSGYGAEIRAADDGGEARLANLEKL
                     SDAVDGFEDIDSLLDELDRQAGADDVPKPKTASLFQTMTLDRITFDEALELLSLPRTV
                     GTDPADGVEVTVHNGPYGAYLRKGSDSRNIETEEKLLTITLEECLALLAQPKRRGRNA
                     PKPPLRELGTDPESGKTIFLKDGNWGPYVTDGEFNASLKRGDAVEELTDERASELLAE
                     RRMKGPAKKKR"
     gene            4808..6238
                     /locus_tag="QGG16_09395"
     CDS             4808..6238
                     /locus_tag="QGG16_09395"
                     /inference="COORDINATES: protein motif:HMM:NF019310.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HJP25527.1"
                     /translation="MIGATGRDPGDPRPGDEFTPFLPLAGRPPLRTRLFGTPAFFRLW
                     MAQVVSATGDWLGLLAISILAIRLGSGNEGAALSLVLAARIVPGFFFGPVAGVLVDRW
                     DRKRTMVTCDVGRAMVMLALPFVDTLVGLFVASLLLEAFTMLWGPAKEASVPHVVPAD
                     QLATANSLSLVAAYGTFPLGALLMALFGRLSTALFDSSWADNVRLDDMGLAFYANALS
                     FLVTGWLILTLNLPKRPRAEKDAAKSRRAALSHPIAELREGWRFAFVNPVVRTVNIGL
                     ATGLMGGGMLVPLGAIYADEVLGAGKSGLGVLITALGLGVAAGVGLVSLLQRRLDKAR
                     TFSRALVGAGIFLALAASISQVHVSTAMVFGIGICAGSVYVLGFTLLHENVDDDLRGR
                     IFSTFYLLVRGCVLLALVVGPLMEDLLDRLSSVLWNRHVELFGVGIDVPGVRLTLWLA
                     SLIILASGALAVGSLKAGVRRGEDVP"
     gene            6235..6861
                     /gene="tmk"
                     /locus_tag="QGG16_09400"
     CDS             6235..6861
                     /gene="tmk"
                     /locus_tag="QGG16_09400"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: protein motif:HMM:TIGR00041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HJP25528.1"
                     /translation="MIGRFIAVEGADGTGKSTQARLLAERLGALFTREPGGTPLGEQI
                     RDLVLDPAGEAPVDRAEALLMAAARAQHVDLVVAPALAAGRDVVSDRYVASSIAYQGH
                     GRGLGAGSVAEVNEFATGGLAPDLVVLIEVAAPVAGSRLGEDREGELDRIEQAGDDLQ
                     GVVADAYRAMAIADPDRWVIIDGDGTVDEVAARVAAMVDDWLNPRWDS"
     gene            6858..8057
                     /locus_tag="QGG16_09405"
     CDS             6858..8057
                     /locus_tag="QGG16_09405"
                     /inference="COORDINATES: protein motif:HMM:NF024575.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25529.1"
                     /translation="MTASTGALAVTTLLDETALWATVVGQESAVALLRRAAEHPVHAY
                     LLIGPPGAGRAEAARAFAGSLFAGNGLAGPPIGAEEGGSAEEGNRHRGLAAVGRHPDL
                     ILVEPEGRALLVADAERITVEGWRSPIEAAHKVIVVDRFDTAEPSAAASLLKTIEEPP
                     ASAVFVLLAEEVPDEHVTIASRCIRVDLPPIPDVVVAETLLADGVSADRITGLAEAAA
                     GSVTRARLLAADPAFLGRRDAWHSVPDRLDGSGASVAVLVTELRELIDAAQKPLEARH
                     REEIEALTEREEAFGTRGSGRRELGERQKREVRRHRDDELRFGLATLSRAYLARVGLL
                     TENLCAEVLSSGSEAFLSATERITEATGDLVRNPNETLLLQALLLDLPSADALAEPLR
                     AVGVDLE"
     gene            8054..8839
                     /locus_tag="QGG16_09410"
     CDS             8054..8839
                     /locus_tag="QGG16_09410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase"
                     /protein_id="HJP25530.1"
                     /translation="MILADPSPMDGSFHLLDDPDHRERCRQVLDAEGALVLEGFFTAE
                     AVARVVADSAPREAEAYYAASTHNVYLTPPDPALAADHPFNRQVVSSKGLIADDQIPD
                     DSPLRTVYDDPSFREFLCAVLGIDAVYPYADELSSINVHFAAHGRELGWHFDNSSFAV
                     TMLLQAPEAGGAFEYVAGVRDADAGEMAFGTVGAVLDGDYSVETLAFAPGDLVLFRGR
                     NAMHRVTSTEGSVTRLLVVFAFNDQPDVALSDSALQTFYGRTS"
     gene            complement(8868..9656)
                     /locus_tag="QGG16_09415"
     CDS             complement(8868..9656)
                     /locus_tag="QGG16_09415"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HJP25531.1"
                     /translation="METTMGRLAGKATFITGAAAGIGRESALLFAAEGAAVAVVDRDS
                     DSAAHVVDEITEAGGTAVGLTADVAVETSVAAAINDAEEAFGRLDVVFNNAGIMLAAD
                     GDAQSTEEAVWDLTMDVNLKGVWFGCRHGIPALRRSGGGSIINTASFVALVGAATPQL
                     AYTASKGGVLAMTRELAVTHAREDIRVNALCPGPLRTELLMSYLDTEEMRQRRLVHVP
                     MGRFGEAAEIAAAALFLASDESSYVTGTDFSVDGGLTAAYVTPE"
     gene            9717..10127
                     /locus_tag="QGG16_09420"
     CDS             9717..10127
                     /locus_tag="QGG16_09420"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25532.1"
                     /translation="MALADYSEVVRGASHHDCPGTCAWEVVLEGGRVVRLLSVEDHPF
                     TAGELSIKVNRYLDRVHDPDRLLTPLNRIPGTPRGEPTFGLFGRWGPGVNAQTNSTVG
                     RRLGSVAFHDTLLEVAGLPERHDPVRAEGTWLRR"
     gene            10112..10981
                     /locus_tag="QGG16_09425"
     CDS             10112..10981
                     /locus_tag="QGG16_09425"
                     /inference="COORDINATES: protein motif:HMM:NF024118.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HJP25533.1"
                     /translation="MATTVTVTGTGTPIPTPDRAGPGVLVAWEPSDGGDPIRIQVDAG
                     RGTVMRLLGAGTSPGGLAAVLLTHHHSDHLVGLDDVLLTRWVMDRDQNLPALPVVVPA
                     GPCVRFVEGLADRWSEDLEVRLAHTGRQQGPRVDAVPFDYPAVPTEVWRSGDVRVVAG
                     QVRHEPVHPAVGFRIETPDGVVVISGDTLVCNEMAELAAGADVLVYEAMRFSEIQKLE
                     EHRRFILDYHADTVEIGCQAQELDVPTLMLTHLIPPPTSAADEALFVDEIRRGGYEGE
                     VVVARDLTSVTLG"
     gene            complement(11091..11804)
                     /locus_tag="QGG16_09430"
     CDS             complement(11091..11804)
                     /locus_tag="QGG16_09430"
                     /inference="COORDINATES: protein motif:HMM:NF013570.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanyl-tRNA editing protein"
                     /protein_id="HJP25534.1"
                     /translation="MTERLYLRDAELRSFEAEVVAVDGNRIELDRTAFYATSGGQPHD
                     TGHLVWATGAATVTDVRTIDGHLLHTVAGPIPTVGTPVAGEVDDERRRQMMRTHTAMH
                     VLCGVMWKHWKRVVTGGNMDALSGRMDFEVDQLPEGFATEVESLCNAEIAADRPIEVS
                     FIARGAAVLDRELIRTKVSLVPASVTEIRVVDIVGLDKQADGGTHVSSTGQVGRLEVV
                     KTESKGKGFKRIRFVLHDA"
BASE COUNT         1874 a         3810 c         4039 g         2195 t
ORIGIN      
        1 cggcttcgcc acgagtcggg cctcggtgtg gcgttgatgc atcgcctagc cgacagggct
       61 gaggtagaaa gcggtccaga cggtacgacg gtccgtctca cgatccgccc cggttgacca
      121 gcccccccga ggaacagcgc ccccagtcct gaagctggtg tccaaaggcg ggcatccata
      181 gtgatggcac agggtgacgg ttaccgttcg tgcgacgcaa cggcggtgga gatcaacctg
      241 atcccgctgg agacgaaccc cgagggagtg ctggaagcaa cgatgtcagg tccacaatct
      301 ggatccagac ccacatggtt gggcagtgac cgtcctctgg cgcgcaccat cggccgacct
      361 gtcatgcggt tcctgggcat cgaggcggcc ggcggcattc tgctcatggt ggccaccgtg
      421 gcggccctct tctgggccaa ttctccctgg tcgggtagct accacgattt ctggcacacc
      481 gaggtccatc tagggatcgg cgatctgcga ctcgaacacc acgggcaccc gctgacgctg
      541 gttcaactgg tgaacgatgc cctgatggcc attttcttct tcgtggtggg cctcgagatc
      601 aagcgtgagt tggtcaccgg tcatctgcgc gaccgtcggg ccgccctgct cccggccgcc
      661 ggggcactag gcggcatggt cgtcccggcg ctgatctact tcgccttcaa ctcgtcgggt
      721 gacgcctcgg ccggctgggg gattcctatg gctaccgaca tcgccttcgc cgtcggggtg
      781 ctctccctgc taggcaaccg gatctcgacg cccctgaagg tctttttgct gtcgctggcc
      841 atcgttgatg acatcggggc gatcctcgtg atcgccgtct tctacaccag cgacctggcc
      901 ggcgagtggc tggtgctggc tgtcgccgcc acggtggccg tcgttctcct gacccggttc
      961 aaggtctggt acacgccgct gtacatcgtg ttgggatcgg tgctctggta cgccatgttc
     1021 cgctctgggg tgcatgccac gatcgccggg gtgatcatgg gactcttggc cccggccggt
     1081 gtcctcctcc agccgggcga ggtagcaccc atcgacgtcg ggtcgttgaa tgccgacggc
     1141 cttcgggagg ccaagttccg gatgaacgag tcggtctctg tggcgtcccg gctcgaacac
     1201 caacttcacc ccataaccgg gttcataatt atccccgtct ttgcgctggc aaacgcaggg
     1261 atcgagatca gtggggactc cttacgcgac gcgctcggct ccggggtgac catcggcgtg
     1321 gccatcgggt tggtggtcgg caaggcggtg ggtgtcagcc tgttcacgat gggagcagta
     1381 cggctgggca tctcggcgtt gccgtcgggg gcgactatcc ggcatatcgt cgggatctcg
     1441 accattgccg ggatcggttt caccgtctcg ctgttcgtga ccggactggc cttcgacgac
     1501 ctggcgatac aggacgaggc caaggtgggc atcctcctag cctcgatggt cgcagccctg
     1561 ggcggcgtgg ccatcctgct gggtgcccga tccactgatg agggggcaac ccatgggtga
     1621 cgcactggtc atcgtcgagt ccccggccaa ggccaagacg atcgccggct acctcggtga
     1681 cggtttcgtg gtggagtcct ccatcggcca tgtgcgggac ctgcccatgc gtgcctcgga
     1741 cgttccggcc gcctacaagg gtgagccgtg ggccaagacg ggcgtcgacg tcgacaacga
     1801 cttcaagccg ctttacgtcg tcaacgccga caagaaacag cagatggcga atctcaagcg
     1861 cctgctgaag aaggctgacg tcctgtatct ggctacggat gaggatcgcg agggtgaggc
     1921 catcgcctgg cacctgcttg aggtcctcaa ccccaaggtc ccggtccatc ggatggtctt
     1981 ccacgagatc accaaggggg ccatcaccga ggcgttggac aacacccgtg agttggaccg
     2041 acgactggtc gacgcccaag agacccgtcg gatcctcgac cgtctctacg gctatgagct
     2101 ctcaccggtg ctttggcgga tgatcggtgc gggcctgtcg gcaggtcgcg tgcagagtgt
     2161 ggccactcgc atgatcgtgg aacgcgaacg tgaccggatg gccttcaatt cggccgatta
     2221 ttgggacctg aattgtgcca tggcaacccg tgtctcacag ggcacgggag caggattcac
     2281 cgcgcgcctc ctagaggttg acggtcggag ggtggccctc gggcgggact ttggtgatga
     2341 cggacaccca ccgcgggccg acgttcttgt cctagacgag acgtcagcgg gcgccgtacg
     2401 tgacgatctg gaggggcgac ccgccaccgt cgaggccgtc gaacccaagc cgtaccggcg
     2461 ccgaccgtcg gcaccgttca ccacctcgac tttccagcag gaggcaggcc gacgcctcag
     2521 gctctctgca tcgcgggcca tgcatgccgc tcagggtctg taccagaagg ggtacatcac
     2581 ctacatgcgg accgacagca ccacgctgtc ggacacggcg gtgcgggccg cccggaccga
     2641 ggccaccgaa cgctttggtt ccgaccacgt ccccgacgcg ccccggactt acgccaacaa
     2701 ggtccgtaat gcccaggagg cgcacgaggc cattcggccg gccggcgacc gcttccgtca
     2761 ccccgatacg gtccgtggcg agcttcccaa gtctgaggcc gacgtctacg agttggtgtg
     2821 gcgccgcacc gttgcttccc agatgaccga cgccaccggc gagacagtcc gcctccgaat
     2881 gggggccgat ctggcgtcgg gcacgggtgt cgacggggtt gggtcccggg ccacgctggc
     2941 ggccagcgga accgtcatcc aacatcaagg attccgccgg gcttacgagg agacccgtga
     3001 cgaatcccct cgtcgtggtg ccgaggccac cgacgacgat gacggcgacg ccacagagtt
     3061 ggtgcttcca gcggtgaccg ttggcgaggt tatcgacgtg gtgtcggcaa ccgcagaagg
     3121 ccacaccacc cagcccccgg cccgctacac cgaggcctcg ctcgtcaaag gaatggagga
     3181 acacggcgtg ggccggccct ccacctatgc ctccatcatg gagaccatcc agcggaagta
     3241 cgtgttcaag aagggcacgg cgctggtgcc gacgttaagt gcatttgccg tcaccaacct
     3301 gctggaacag cacttccccc gcctcgtcga ctacgacttc acggcgggta tggaagacga
     3361 cctcgatgac atcgccaacg gtgaggcgga gagcgttccg tggctgcacg ccttctactt
     3421 cgggtccgat gctgacatcg gtctgcacgc caaggtcact acccgcctcg gcgagatcga
     3481 cccccggggg gtaagcaccg ttgaactcgg ggcgacgccc gacggcgagc cggtggtggc
     3541 ccgtttcggc aagttcggcc cgtacgttca ggtgggcgac gagacggcgt cgatccccga
     3601 tgacgtaccg cccgacgagc taacggtggc ccgggcgctc gagttcctgc acgctccggc
     3661 tgaccgggag ctgggtaccg accccgacac gggactggtg gtcgtggcac gttccggacg
     3721 atttggcccc tacgtgtcgc tcggccgtcc acccgaacgc cctgcaccgt cgtcgccggc
     3781 cggtcgtctc atggcccttc cgggcaaccg caaggaaatc ggcgtggcgc tcggttacct
     3841 gcgtctggct gccggccggc tcgacctggc cgcggcgaag aaggtgctga acgtgccggc
     3901 gcgcggggtc agcgcgttgg ctctcaagaa ggttgtcgag gcgactgaag tggggctgcc
     3961 ggtgttggag gtcctgcggg acacagaggc cctcggtctc tcggccaagg cctgtgccgg
     4021 catcgaagcc ttcctgtccc tcggggaaca gttggctggc ttgcgatccg aagggccgcg
     4081 tgccgtgatc gaggcggctc tggaatcctc gggctatgga gctgagatcc gggctgctga
     4141 tgacggtggc gaggcccgcc tcgcgaacct ggagaagctt tctgacgcgg tggacgggtt
     4201 cgaagacatc gattcacttc tcgatgaact agaccgccag gccggtgccg atgacgtccc
     4261 gaagcccaag acggcttcgc tgttccaaac catgacgttg gatcgcatta ccttcgacga
     4321 ggcgcttgag ttgctgagcc tgccccggac cgtgggtacc gatccggctg acggggtcga
     4381 agtcaccgtg cataacggtc cctacggcgc ctacctccgg aaggggtcgg atagccgcaa
     4441 catcgagact gaagagaagc tccttacgat cacgctcgag gagtgcctgg cgctcctggc
     4501 ccaaccaaag cgacgtggtc gtaacgcccc gaagccgccg ctgcgcgagt tgggtaccga
     4561 tcccgagagc gggaagacga tcttcctcaa ggacggcaac tggggcccct atgtgaccga
     4621 cggggagttc aacgcctcgt tgaagcgcgg cgacgctgtc gaggagctca ccgacgaacg
     4681 ggcatcagag ttgttggctg aacgacgtat gaagggccca gccaagaaga agcgttgatt
     4741 ggtggctggc tgcgcccggc gatcgaccgc ccccgggtgg tcgactcctc tcccatagaa
     4801 tggatgggtg attggagcga cgggacggga cccgggcgac ccccgccccg gagacgagtt
     4861 cactcccttc ctgccgctgg cgggtcgtcc gccgctacgt acccgcctgt tcggcactcc
     4921 ggcatttttc cgcctctgga tggcccaggt cgtctcggcg accggcgact ggttgggact
     4981 tttagctatc tcgatcctgg ccatccggct gggttcgggt aacgagggag ctgccctcag
     5041 tctggtgcta gcggcccgca ttgttcccgg gtttttcttt ggtccggtag ccggcgttct
     5101 ggtcgaccgg tgggaccgca agcgcaccat ggtcacctgt gatgtgggcc gggccatggt
     5161 gatgctggcc ctgccgttcg tggacaccct ggtcggcttg ttcgtcgcct cgcttttatt
     5221 ggaggcgttc accatgctgt ggggtcctgc caaggaggca tcggtgcctc acgtggtccc
     5281 ggccgaccag ttggccacgg ccaactccct gtcgctggtc gctgcctatg ggacctttcc
     5341 cctcggggcg ctgctcatgg ccctgtttgg gcgactgtcc acggccctgt ttgattcgtc
     5401 gtgggccgac aacgtgcgac ttgacgacat gggcctggcc ttctacgcca acgccctctc
     5461 gttcctggtc accggttggc tgattctgac actgaatctg cctaagcgtc cccgggccga
     5521 gaaggacgct gcgaagagtc gccgggccgc cctgtcccac ccgatcgccg agctgcgcga
     5581 aggctggagg ttcgctttcg tgaacccggt ggtccgcacc gtgaacatag gtctagccac
     5641 cggcctcatg ggaggcggga tgttggtgcc tctcggggcc atctacgccg acgaggtctt
     5701 gggtgccgga aagtcgggtc tgggcgtact cattacggca ctcggtctgg gtgtggccgc
     5761 tggcgtcgga cttgtctcac tgctgcagcg acgtctcgac aaggcccgta ccttcagcag
     5821 ggccctggtc ggcgcgggga tctttctggc cttggcggcg tcgatcagcc aggttcacgt
     5881 gtcgacggcc atggtgttcg ggatcgggat ctgtgctggg tcggtctacg tcctcgggtt
     5941 caccctcttg cacgagaacg tggacgacga cttgcgaggc cgaatcttct cgaccttcta
     6001 cctgctggtc cggggctgtg tgctactggc cctggtcgtc gggccgctca tggaggatct
     6061 actagaccgg ctatctagtg tcctgtggaa ccgccacgtg gagttgttcg gcgtgggaat
     6121 agatgtgcct ggggtgcgcc tgacactgtg gttggcttcg ctgatcatcc tggcgtcagg
     6181 ggcgctggcc gtcggctcgc tgaaagccgg cgttcgccgc ggggaggatg tgccgtgatt
     6241 ggtcggttca tcgccgtcga gggggcggac ggcacgggca agagcaccca ggcccggttg
     6301 ttggccgaac gccttggggc gctgttcacc agagaacccg ggggaacgcc gctgggtgag
     6361 cagatccgcg atctggtgct ggacccggct ggcgaggccc cggtggatcg ggccgaggcc
     6421 ctactgatgg cagccgcccg agcacagcac gtggacctgg tggtggcacc cgccctggct
     6481 gccggccgtg acgtggtatc ggatcgctac gtggcatcgt cgatcgcgta ccagggccat
     6541 ggtcgtgggc ttggtgccgg gtcggtcgcc gaggtaaacg agttcgccac cggcgggttg
     6601 gctcccgatc tggtggtcct gatcgaggtg gcggcgccgg tggccggcag ccgactgggt
     6661 gaagaccgcg aaggggagtt ggacaggatc gagcaggccg gcgacgacct gcagggggtg
     6721 gtggctgacg cgtaccgggc aatggcgatc gccgacccgg accgctgggt catcatcgac
     6781 ggtgacggca cggtcgacga ggtagcggcc cgggtagccg cgatggtcga cgattggttg
     6841 aatccgcggt gggattcgtg actgccagca ctggtgcatt ggccgtcacc accctgctgg
     6901 acgaaacggc gctttgggcc acggtcgtgg gtcaggagtc ggcggtggcg ctgctgcgtc
     6961 gggccgccga gcacccggtc cacgcctacc tgctgatagg gcctccgggg gccggccggg
     7021 ccgaggcggc aagggccttc gccggttcac tgtttgctgg gaacgggtta gccggtccac
     7081 ccattggagc tgaggagggt ggatctgccg aggaggggaa tcgacatcgg ggtctggccg
     7141 ccgtcgggcg ccatcccgac ctgatcctgg tggagcctga gggccgggca ctgctggtgg
     7201 ccgacgccga gcggatcacc gtggagggct ggcggtcgcc tatcgaggcc gcccacaagg
     7261 tcatcgtggt tgaccgcttt gacactgccg aaccgtctgc ggcggccagc ctgctcaaga
     7321 cgatcgagga gccacccgcc tcggcggtgt tcgtcctgct ggccgaggag gtgcctgacg
     7381 agcacgtgac catcgcctcc cgctgtatcc gtgtcgacct acccccgata cccgatgtcg
     7441 tggtggctga gactctgcta gccgacgggg tgtccgccga tcggatcacc gggttggcag
     7501 aagccgcggc aggcagcgtg acccgggctc ggctactggc cgccgacccg gctttcctag
     7561 gccgacggga tgcctggcat tccgtgcccg atcggttgga cgggtcgggc gcttcggtgg
     7621 ccgtactggt caccgagctg cgggagctca tcgacgctgc ccaaaagccg ttggaagccc
     7681 gtcatcgaga ggagattgag gccctgacag agcgcgagga ggcgttcggt acccgtggat
     7741 ctggtcgccg tgagctggga gagcgtcaaa agcgggaggt ccgacggcac cgcgatgacg
     7801 aactccgctt cggcctagcc accctgagcc gcgcctacct ggcgcgggtc ggcctgttga
     7861 cagagaacct ctgcgcagag gttctgtctt cagggtccga ggcgttcctg tcggccaccg
     7921 agcggatcac cgaggccact ggtgatctgg ttcgcaatcc caacgagacc ctgctgcttc
     7981 aggccctcct tctggacttg ccgtcggccg atgctttggc cgagccgctc cgggccgtcg
     8041 gggtggacct ggaatgatcc tcgccgaccc ctctccgatg gatgggtcgt tccatctgct
     8101 ggacgacccg gaccaccgag agcgttgtcg gcaggtgttg gatgccgagg gcgccttggt
     8161 gctcgaaggc ttcttcaccg ccgaggcggt ggccagggtg gtggctgact cagcgccccg
     8221 ggaggccgag gcgtactacg ccgcgtcgac ccacaacgtg tacctaaccc cgccggaccc
     8281 cgcgctggct gccgaccacc cgtttaaccg tcaggtggtg tcgtccaagg gcctgatagc
     8341 cgacgaccag attccggacg actccccgct acggaccgtt tacgacgacc cttccttccg
     8401 ggagtttctg tgtgcggtac tgggtatcga cgccgtctat ccgtacgccg acgagctgtc
     8461 gtcgatcaac gtccactttg cggcccacgg acgtgagctg ggctggcact tcgacaactc
     8521 ctcctttgcc gtgaccatgc tgctccaggc ccccgaggcc ggtggagcct tcgagtacgt
     8581 ggccggggtg cgcgacgccg atgccggaga aatggcgttt ggcacggtgg gagcggtgct
     8641 cgacggcgac tattccgtgg agacgctggc cttcgctccc ggcgacctag ttctgttccg
     8701 gggacgcaac gccatgcacc gggtgacctc gaccgagggc tcggtgaccc gcctgctggt
     8761 ggtattcgcg ttcaacgacc agccggacgt ggccctttcg gattcggccc tgcagacctt
     8821 ctacggacga acgtcctgaa cgtccagcgt cccggcgggc cggtccacta ttcgggcgtc
     8881 acgtaggcgg cggtcagtcc accgtccacg gagaagtcgg tcccggtcac gtacgacgat
     8941 tcgtcagacg ccagaaacag ggccgctgcc gcgatctcgg ccgcctcgcc gaagcggccc
     9001 atgggtacat gcacaaggcg acgttgccgc atctcttcgg tgtccaggta cgacatcagc
     9061 agttcggttc gcaacggtcc cggacacagg gcattgaccc ggatgtcttc ccgagcgtgg
     9121 gttaccgcaa gctcgcgggt catggccagc accccgccct tggacgctgt gtacgccagc
     9181 tgtggtgtgg cggctcccac cagggccacg aagctggctg tgttgatgat cgacccgcca
     9241 ccggatcgac gcagcgccgg gatgccgtga cggcagccga accacacgcc cttgaggttg
     9301 acgtccatgg tcaggtccca gacggcctcc tcggtggatt gggcgtcgcc gtcggcagcg
     9361 agcatgatcc cggcgttgtt gaagaccacg tcaaggcgtc cgaaggcctc ctcagcgtcg
     9421 ttgatcgctg cggcaaccga tgtttcgacg gccacgtcag cggtcagccc gacggccgta
     9481 ccccctgcct cggtgatctc gtctaccacg tgggccgcgc tgtcactgtc ccggtcgacc
     9541 accgccacgg cagcgccctc ggcggcgaac agcagcgccg actcccgtcc gatgccggcc
     9601 gccgcgccgg tgatgaaggt ggccttgccg gcaagtcgtc ccatggtggt ctccataggc
     9661 cgagcatcgc acatctgcac tgtgccaaga ccgggtcgct ctgacaggct gtggagatgg
     9721 cgctagcgga ctactcagag gtagtacgcg gtgcctccca ccacgactgc ccgggtacct
     9781 gtgcttggga ggtcgtcctg gaaggtggtc gggtcgtgcg gctgctgagc gtggaggatc
     9841 acccgttcac ggcaggtgaa ttgtccatca aagtgaaccg ttacctcgac cgggtccatg
     9901 acccggatcg gctactcact ccgctgaacc ggatccccgg caccccaagg ggcgaaccga
     9961 ccttcggatt gttcggaagg tggggcccgg gagtcaacgc ccagaccaac tcgacggttg
    10021 gccgacggct cggatcggtc gcctttcatg acacgctgct ggaggttgcg ggactgcctg
    10081 agcggcatga cccggtgagg gcggagggaa catggctacg acggtgacag tgaccggcac
    10141 gggaaccccg atccctacgc ccgaccgggc tggaccgggg gttctggtgg cctgggagcc
    10201 ttcagacggt ggcgatccga tccgtatcca ggtggatgcg ggtcggggca cggtgatgcg
    10261 tttgctgggt gctggcacga gtccgggtgg gctcgccgcc gtgctgttga cccaccacca
    10321 ttccgatcac ctcgtcgggc tggacgacgt gctgctgacc cgatgggtca tggaccgcga
    10381 ccagaacctg ccggcccttc cggtggtcgt gccggcgggc ccctgtgttc ggttcgtcga
    10441 gggtctggcc gaccggtggt ctgaggatct cgaggtgcgc ctagcccaca ccgggcgcca
    10501 gcaaggtccc cgggtcgacg ccgtgccctt cgactacccg gcagtgccca ccgaggtctg
    10561 gcgatccggt gatgtccggg tggtggccgg tcaggtccgt cacgaaccgg tgcacccggc
    10621 tgtcggcttt cgtatcgaga cgccagacgg ggtggtggtg atctcgggcg acaccctggt
    10681 gtgcaacgag atggccgagc tggccgccgg agctgatgtg ctggtctacg aggcgatgcg
    10741 gttcagcgag atccagaagc tagaggagca ccggaggttc attctcgact accacgccga
    10801 cactgtggag attggctgcc aggctcagga actcgacgtg ccgaccctga tgctcaccca
    10861 cctcatcccg cctccgacgt cggcggcaga cgaggcactt tttgtcgatg agatccgacg
    10921 tggtggctat gagggcgagg tcgtggtggc ccgggatctc acgtcagtca ctctcggtta
    10981 atcccgccac atggtcgccg ggttcgacgt cggcggtccg ggtcaccgag ccgcaaccgg
    11041 ttaagggggg ccacagcacc acgttggaga cagtagtgag gaacggtcgg tcaggcgtcg
    11101 tggaggacga accggatccg cttgaagccc ttcccctttg actcggtctt gactacctcg
    11161 aggcgaccta cctgaccggt ggatgacaca tgggtaccgc cgtcggcctg cttgtctagg
    11221 ccaacaatgt ccactacccg gatctccgtc accgaggcgg gaaccagact gaccttggtg
    11281 cggatgagct cgcggtccag cacggcggca ccgcgagcga tgaatgacac ctcgatgggc
    11341 cggtccgcag cgatctcggc gttgcacaga gactcgactt ctgtcgcaaa cccctcgggt
    11401 aactggtcga cctcgaagtc cattcggccc gagagggcat ccatgttgcc gccggtcacc
    11461 acccgcttcc agtgcttcca catgacgccg cacagaacat gcattgcggt gtgggtacgc
    11521 atcatctggc ggcgtcgttc gtcatccacc tcgccagcca ccggggttcc gacggtgggg
    11581 atcggaccgg ccaccgtgtg caggaggtgt ccgtcgatgg tccgaacgtc ggtgacggtg
    11641 gccgcaccgg tggcccacac cagatggccg gtgtcatgcg gctggcctcc gctggtggca
    11701 tagaaggccg tgcggtccag ttcaatccga ttaccgtcca cggccaccac ctcagcttcg
    11761 aatgaccgga gctccgcgtc gcgcaggtag agacgttcag tcacgggctt gttcctgcgg
    11821 ttcgggctac atcgatgcgg agttctcccg ctagcaccgt ccacgccagg ggagtcagtc
    11881 ccgcgccgtc ggccggccag gtactcgtcg aatcacag
//
LOCUS       DASCMR010000412         1746 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001962826, whole genome shotgun sequence.
ACCESSION   DASCMR010000412 DASCMR010000000
VERSION     DASCMR010000412.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1746)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1746)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1746
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001962826"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..632
                     /locus_tag="QGG16_09435"
     CDS             <1..632
                     /locus_tag="QGG16_09435"
                     /inference="COORDINATES: protein motif:HMM:NF012655.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HJP25535.1"
                     /translation="SPSSHTGSELTDRLLQAAAEVFAEKGYEKAGVAEIARRAGVTTG
                     AIYNRFGGKAELLLEAADHHMPGSLDTVLNSSGSGSATEVLSRLGDHLLDDLDGGHGL
                     FLEAVVAARRDPELADRLRCRVTDEDRRLGKIVSEGTSDGLLDPGLDEQAVVRLAHAI
                     GFGMLLTRSMGLDLPEPDNWHAVIDRVLAGLALPTENFPTDDSLTGDQT"
     gene            629..>1746
                     /locus_tag="QGG16_09440"
     CDS             629..>1746
                     /locus_tag="QGG16_09440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin-like domain-containing protein"
                     /protein_id="HJP25536.1"
                     /translation="MTITQDDAATSSGGSPVEGPSDGATAFDQLIDKVRAEFDTQFTW
                     DYERGRDGLNRLYEKAKRSQWNVSDDLDWSIDVDPERMVRLQAETTGIPAGFPARSLL
                     DVKGSPVASWNDDQWVDFAVNSQCASLSQFLHGEQGALLCTARLVESVPWIEAKYYGS
                     TQVVDEARHVEAFARYLDEKMPTTYPINENLKSLLDSVLSDERWDLVYLGMQVVIEGL
                     ALAAFGMMLGTTQEPLLKNLLRYVMSDEARHVAFGILSLQEIYADLSADDFRLRQEFA
                     FEACNQMRRRTLNAELWPSYGISNEEIEALLPDQNSQQKFQQLLFSKIVPNCKKLGLL
                     DHRDGWLRERFQEMNIIQFEDWENTAEALDLDGPVADR"
BASE COUNT          334 a          614 c          528 g          270 t
ORIGIN      
        1 actcacccag ttcccacacc gggagcgaac tcacggaccg tctgctgcaa gcggcggctg
       61 aggtgttcgc cgaaaagggc tacgaaaagg ctggcgtcgc cgagatcgcc cgtcgagccg
      121 gcgtaaccac cggcgccatc tacaaccgct tcggcggcaa ggccgaactc ctcctcgaag
      181 ccgccgacca ccacatgccc ggctcgctcg acacggtgct caacagcagt gggagcggct
      241 cggcaaccga ggtgctgtcc cggctcggcg accacctgct cgacgacctg gacggcggcc
      301 acgggctgtt cctcgaagcc gtggtggccg cccgtcgcga ccccgagttg gctgaccgcc
      361 tccggtgtcg ggtgaccgac gaggaccgac ggcttggcaa gatcgtcagc gagggcacca
      421 gcgacggact cctggacccg ggcctcgacg agcaggcggt ggtccggctg gcccacgcca
      481 tcggcttcgg gatgctgctg acccgttcga tgggcctaga cctccccgag cccgacaact
      541 ggcacgccgt catcgaccgg gtcctggccg gactggcgct ccccaccgag aactttccca
      601 ccgacgattc cctgaccgga gaccagacat gacgatcacc caggacgatg ccgctacctc
      661 gagtggcggg tccccagttg agggaccttc cgacggcgct accgctttcg accagctcat
      721 cgacaaggtc cgggccgagt tcgacaccca gttcacatgg gattatgaac gcggtcggga
      781 cggcctgaac cgcctctacg agaaggccaa gcggtcccag tggaacgtca gcgacgacct
      841 ggactggtcg atcgacgtgg acccggagag gatggtccgc ctccaggccg aaaccaccgg
      901 aattccggcc gggttcccgg cccgcagcct gctcgacgtc aagggctccc ccgtcgcctc
      961 atggaacgac gaccagtggg tcgacttcgc ggtcaactcc cagtgcgcgt cgctcagcca
     1021 gttcctgcac ggggagcagg gcgccctgct ctgtacggcc cgtctcgtcg aatcggtccc
     1081 gtggatcgag gccaagtact acggctccac ccaggtggtc gacgaagccc gccacgtcga
     1141 ggcgttcgcc cggtatctcg acgaaaagat gcccaccacc tacccgatca acgaaaacct
     1201 gaagtcgctg ctggactcgg tactaagcga tgaacgatgg gaccttgtct acctcggcat
     1261 gcaggtggtg atcgaaggcc tggccctagc cgccttcggc atgatgctgg gcaccaccca
     1321 ggagccgcta ctcaagaatc tgctgcgcta cgtgatgtcc gacgaggccc gccacgtggc
     1381 cttcgggatc ctctcgttgc aggagatcta cgccgacctc tcagccgacg atttccggct
     1441 ccgccaggaa ttcgccttcg aggcctgcaa ccagatgcgc cgccgcaccc tgaacgccga
     1501 gttgtggccc agctacggca tctccaacga ggagatcgag gccctgctac ccgaccagaa
     1561 ctcccagcag aagttccaac agttgctgtt ctccaagatc gtccccaact gcaagaaact
     1621 gggcctgctc gaccatcgag acggctggct gcgcgagcgc ttccaagaga tgaacatcat
     1681 ccaattcgag gactgggaga acaccgccga agccctcgac ctcgacggac cggtagccga
     1741 ccggga
//
LOCUS       DASCMR010000413         2845 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001967489, whole genome shotgun sequence.
ACCESSION   DASCMR010000413 DASCMR010000000
VERSION     DASCMR010000413.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2845)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2845)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2845
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001967489"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1701
                     /locus_tag="QGG16_09445"
     CDS             <1..1701
                     /locus_tag="QGG16_09445"
                     /inference="COORDINATES: protein motif:HMM:TIGR01511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HJP25537.1"
                     /translation="RATSMDTLVSMGTAAAWAWSVVALVAGRGHVYFETAAVIVTLVL
                     MGRWLEQRARQRSGEAIRSLAGLSVRDATLANGPTIPIVDVEVGMRLLVRPGEKVPVD
                     GRILEGSSNVNESMLTGEPLPVAVGVGDTVTGATVNANGALVIEAIRVGADTTLARIM
                     RLVDEAQADTAPVQRLVDRISAIFVPVVLGVSVATLLAWLVTGQPTADAFTAAVAVLI
                     IACPCALGLATPTAVMVGTGRGAQLGVLIRGGEVLESARRVDHVVLDKTGTVTAGHMT
                     MQKVVPAAGVDAGSALRIAASLEELSEHPVATAIVDAADRQLPVSDFTNLPGMGVRGV
                     VNGIEAAVGRPALFNRLSDQLALAVDEAADAGHTAVVVGWEDQARAVLVVADEVRPTS
                     AEAVAGFRRLGLDVTLLTGDDERTARSVAAAVGIDRVVAGVLPDGKDIEIRRLREEGH
                     VVAMVGDGINDAPALARADLGIAMGTGTDVAMEAADFTIVAGDLRAVVDAIRLSRRTL
                     NTIRGNLFWAFAYNVAAVPLAAVGVLDPMIAAGTMAFSSVFVVTNSLRLRRFRGRAGV
                     "
     gene            1771..>2845
                     /locus_tag="QGG16_09450"
     CDS             1771..>2845
                     /locus_tag="QGG16_09450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020379165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP25538.1"
                     /translation="MNHDIPDDLAGYLVELDEFIDREIKPLEEQDDNIRFFDHRREDA
                     RTDWDRDGLPNREWEALLSEARRRADEAGHYRYPLSAEMGGRDGTNLGMAVIREHLAT
                     RGLGLHNDLQNEHSIVGNNVGLLLMLEYGSDEQKEEWVPHLLAGTRGFAFGITEPDHG
                     SDATHMETNAVRDGDGWVLNGEKTWNSGIHRAHSDLVLARTSGEPGDGHGITAFLTPM
                     DADGLKIEEYLWTFNMPTDHGRVSLTGVHVPHGAILGEEGRGLQIAQHFFNENRIRQA
                     ASSLGAAQYCINESVHYAGERRPFGKPLSINQGIQFPLVELQTECEMLRALVQKTAWQ
                     MDAYGAFSVSDRVSMCNYRANRLC"
BASE COUNT          494 a          921 c          962 g          468 t
ORIGIN      
        1 cgggcgacat cgatggacac cctggtgtcg atgggtaccg cagcggcctg ggcgtggtcg
       61 gtggtggcac tcgtggccgg ccggggtcac gtctacttcg agaccgccgc ggtgatcgtg
      121 acccttgttc tgatgggtcg ttggttggaa cagcgggctc gccaacgatc tggcgaagcc
      181 atccgatccc tggccggact gtcggtccgt gacgccacgc tggccaatgg gcccacgatc
      241 cctattgtcg atgttgaggt cggcatgcga ctactggtgc gtcccggcga gaaggtcccg
      301 gtcgatggcc ggatcctcga gggttcttcg aacgtcaacg agtcgatgtt gaccggtgaa
      361 cccctcccgg tagcggtggg agtgggtgac acggtgacgg gcgcgaccgt caacgccaac
      421 ggggctctgg tcatcgaggc catccgcgtg ggcgccgaca ccaccctggc ccgcatcatg
      481 cgactcgtcg acgaggccca ggccgacacc gccccggtgc aacgcctggt cgaccggatc
      541 tcggcgatct tcgtgccggt ggtcctcggc gtctcggtcg cgacccttct ggcctggctg
      601 gtcaccggtc aacccacggc cgatgccttc accgccgcag tagccgtgct gatcatcgcc
      661 tgcccatgtg cgctgggtct ggccacaccg acggcggtga tggtgggcac cggtcggggc
      721 gcccaacttg gagtcctcat ccgcggcgga gaggtactcg agtcggcccg aagggtcgac
      781 cacgtggtgc tcgacaagac aggcaccgtc accgccggcc acatgacgat gcaaaaagtg
      841 gtcccggccg ctggcgtgga cgccggctcg gcactacgga tcgccgcctc gctcgaagag
      901 ctttccgaac acccggtcgc gacagccatt gtcgacgccg ctgatcgaca actaccggtt
      961 agtgacttca ccaacctccc cggcatgggc gttcggggcg tggtcaacgg catcgaggcg
     1021 gcggtcggtc ggcccgccct gttcaaccgg ttgtccgacc aactggctct ggccgttgac
     1081 gaggcggccg acgccggcca cacggcggtc gtcgtggggt gggaagacca ggcccgggct
     1141 gtgctcgtgg tcgccgacga ggtacgacca acgagtgccg aggcggtcgc cggattccgg
     1201 cgcctgggcc tcgatgtgac actgctgacc ggtgacgacg aacgaaccgc ccgctcggtg
     1261 gccgccgcgg tggggatcga ccgggtggtt gccggcgtgc tacccgacgg caaggacatt
     1321 gagatccgcc gactccgcga agaaggccat gtggtggcca tggtgggcga cggcatcaac
     1381 gatgccccgg cgctggcccg ggccgacctc gggatcgcca tgggaacggg aaccgacgtg
     1441 gccatggagg cggccgactt cacgatcgtg gccggcgacc tccgagcggt cgtcgacgcc
     1501 atccgactat cgaggcgcac cctgaacacc atccggggga acctcttctg ggccttcgcc
     1561 tacaacgtgg cggccgtgcc actagcagcc gtcggcgtgc tcgacccgat gatcgcagcg
     1621 ggcactatgg cgttctcatc ggtgttcgtg gtcaccaact cactgcgtct ccgacgtttc
     1681 cgcggtcggg cgggggtctg aggactcagg ccgcggcgtg gcgggaccat ctctgatcgg
     1741 tcagagtggg cacacccccg aggagggccc atgaaccatg acattcccga tgacctcgcc
     1801 ggctacctgg tcgagttgga cgagttcata gatcgcgaga tcaagccgct cgaagaacag
     1861 gacgacaaca ttcggttctt cgatcaccgc cgtgaggatg cgcgtaccga ctgggaccgt
     1921 gacggtctcc ccaaccgcga gtgggaggcc ctcctgtccg aggcccggcg tagggccgac
     1981 gaggcaggcc actaccgcta cccgctctcg gctgagatgg gtggccgtga cggtacgaac
     2041 ctgggcatgg ccgtcatcag ggaacacctc gccaccaggg gacttggcct gcacaacgac
     2101 ctccagaacg aacactcgat cgtcggcaac aacgtgggcc tcctattgat gttggaatac
     2161 gggagcgatg aacagaagga ggaatgggtg ccccacctgc tggccgggac ccgaggattc
     2221 gccttcggaa tcactgaacc ggaccacggc tcggatgcga cccacatgga gaccaatgcc
     2281 gtgcgcgacg gtgacgggtg ggtactcaac ggggaaaaga cgtggaactc cggcatccat
     2341 cgggcgcaca gcgacctggt gctggccaga acctcgggcg aacccggcga cggccacggc
     2401 atcacagcct tcttgacccc catggacgcc gatggcctga agatcgagga gtacctctgg
     2461 accttcaaca tgccaaccga ccatggccgc gtctcgttga ccggcgtaca cgtacctcat
     2521 ggagccatcc tcggcgagga agggcggggg ctgcagatcg cccaacattt cttcaatgag
     2581 aaccggatcc ggcaggcggc ctccagcctc ggcgccgccc agtactgcat caacgagtcg
     2641 gtgcattacg caggagagcg caggccgttc ggcaagccgc tctcgatcaa ccaggggatc
     2701 cagtttcccc tggtggaact tcagacggag tgcgagatgc tcagggcgct ggtgcagaag
     2761 accgcgtggc agatggacgc ctacggggcg ttctcggtct cggacagggt ttcgatgtgc
     2821 aactaccggg ccaaccggtt gtgct
//
LOCUS       DASCMR010000414         2422 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001978871, whole genome shotgun sequence.
ACCESSION   DASCMR010000414 DASCMR010000000
VERSION     DASCMR010000414.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2422)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2422)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2422
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001978871"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..654)
                     /locus_tag="QGG16_09455"
     CDS             complement(<1..654)
                     /locus_tag="QGG16_09455"
                     /inference="COORDINATES: protein motif:HMM:NF012457.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 1 glycosylhydrolase"
                     /protein_id="HJP25539.1"
                     /translation="MSQPDFLWGVTDSSLSVEGVAPTADWSRWERDGRVPTSGDGAGF
                     AIDHADDLRLTAALGFTDVRITVEWARLEPRPGVVDTDALDQAREVLTAAVEAKLRPW
                     VTLVHGTLPGWFADDERGFAEPASRSSWWARHVDRTAEALEDLAAGWVPIEDPIGSAF
                     RGHLLGIRPPGRTNPEAAQVAIEGALEATFEAWRLLQSGDAPVMGVFGAPSVFATSPE
                     "
     gene            complement(676..1521)
                     /locus_tag="QGG16_09460"
     CDS             complement(676..1521)
                     /locus_tag="QGG16_09460"
                     /inference="COORDINATES: protein motif:HMM:NF013722.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /protein_id="HJP25540.1"
                     /translation="MPINPDAVGSVGEPTEISWTSKQSLLYSLGIGAGVADPTGFELE
                     FTTENSDGINQRSFPTQGVVMGGGGTPDFGSFNPVFLLHAEQSITCHREIPAEGTGIA
                     TGKIGPIWDKGKAALVYLETDVTDSDGKPLWSTSAGLFLGGEGGWGGDRGPSADWAAP
                     DRGADHVVSYATRADQALLYRLNGDRNPLHSDPTFASAAGFDKPILHGLCTYGFTGRA
                     LLHATCGSDPGRFGGMGGRFKSPVMPGEVLDVHVWEVDDTTVLFQTRVGDRVVFDSGV
                     MERRP"
     gene            1825..2109
                     /locus_tag="QGG16_09465"
     CDS             1825..2109
                     /locus_tag="QGG16_09465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WhiB family transcriptional regulator"
                     /protein_id="HJP25541.1"
                     /translation="MGIIAKPDLDTDWKDSSNCLGVDPDLFFPERGASTREAKEVCRG
                     CIVQEDCLEYALANGEKFGIWGGMSERERRRIRRQRALERQAAARTAEAV"
     gene            2201..2401
                     /locus_tag="QGG16_09470"
     CDS             2201..2401
                     /locus_tag="QGG16_09470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase TatA/TatE family
                     subunit"
                     /protein_id="HJP25542.1"
                     /translation="MNMLAFLGTQELIIVAIIALVLFGGNQIPKLARNLGKAQKELQR
                     GLAEGQAEADKQSEAQPEKDQE"
BASE COUNT          415 a          740 c          857 g          410 t
ORIGIN      
        1 ctcgggggac gtggcgaaca ctgacggcgc gccgaatacg cccatgaccg gagcgtcacc
       61 gctctgcagg aggcgccacg cttcgaaggt tgcttcgagt gcgccctcga tagcgacctg
      121 ggccgcctcg gggttggtcc taccgggggg gcggatacct agcaggtggc cccggaaggc
      181 tgatccgatg gggtcctcga tggggaccca gccggcggcc agatcctcga gggcctcggc
      241 ggtgcgatcg acgtggcggg cccaccagct gcttcggctc gctggctcgg cgaaccctcg
      301 ctcgtcgtca gcgaaccacc cggggagcgt cccgtggacc aacgtgaccc atggtcgtag
      361 ctttgcctcg acggcggcag tcaagacctc ccgggcctgg tccagcgcgt cggtgtcgac
      421 cacccccggt cggggttcga gtcgggccca ctcgacggtg atgcggacgt cggtaaatcc
      481 cagtgcggcg gtcagccgga ggtcgtcggc gtggtcgatg gcgaacccgg ctccgtcacc
      541 tgaggtcggt actcgtccgt ctcgttccca gcgcgaccag tcggcggtcg gtgccacccc
      601 ctcgaccgac agggacgagt cggtcacccc ccatagaaag tccggttggc tcatcgccgt
      661 ggaaccgtgg gttgtctagg ggcggcgttc catcacaccg gagtcgaaga ccacgcggtc
      721 gccgacccgg gtctggaaga ggacggtggt gtcgtcgacc tcccacacat ggacgtcgag
      781 tacctcgccg ggcatgaccg gcgacttgaa tcggccgccc atgccgccga atcgacccgg
      841 gtccgaacca catgtcgcgt ggagcagtgc cctgccggtg aatccatagg tgcacaagcc
      901 gtggaggatc ggcttgtcga agccggcggc cgaggcgaac gtcgggtcgg agtgcagcgg
      961 gttgcggtcg ccgttgaggc ggtacagcag ggcctggtcg gcccgggtgg cgtaggagac
     1021 gacatggtcg gcaccacggt ccggcgccgc ccagtcggct gacgggccac ggtccccgcc
     1081 ccagccgccc tcgccgccca gaaagagccc ggcgctggtc gaccacagtg gtttgccatc
     1141 ggagtcggtc acgtcggtct cgaggtagac gagcgccgcc ttgcctttgt cccagatcgg
     1201 gccgatcttc ccggtggcga tgccggtgcc ctcggcggga atctcccggt gacaggtgat
     1261 ggactgttca gcgtgtagca ggaagaccgg gttgaagcta ccgaagtcgg gggttccgcc
     1321 tccgcccatg accacaccct gggtcggaaa ggaccgctgg ttgatcccat cggagttctc
     1381 ggtcgtgaac tccagttcga agccagtcgg gtcggccacg ccggcaccga taccgaggga
     1441 gtacagcagg ctctgcttgg aggtccagga gatctcggtc ggttcgccga ctgatccaac
     1501 ggcgtctggg ttgatgggca ttgtcacttc cgggtctgtg tagggcgcgc ccgacgaggc
     1561 acgatggatg gtaccgatga cgttacgggc tggtcgactg gtgcttgctg ttcggggacg
     1621 tactggtgga ctttgtggaa cagcgtcgga cagttcgatc ccgatgttga attgattggg
     1681 aaatcccaga ttttccttgc aattcgggga atcacagtgg tgtaattcca tggacggaac
     1741 ccttcggggg gttctggggg accgagactg gccccagtga ccggaacgac cggtcgatcg
     1801 accggtgaaa ggcggatcag caacatgggg atcatcgcaa agcccgacct ggataccgat
     1861 tggaaggatt cgtcgaactg tctcggtgtg gatcccgacc tgttctttcc cgagcgtggg
     1921 gcgagtacgc gagaagccaa ggaggtgtgc cggggctgca tcgtgcagga ggactgcttg
     1981 gagtatgcgc tggccaacgg cgagaagttt ggtatctggg gtggcatgag cgagcgggaa
     2041 cgtcgccgca tccgtcgcca gcgggccctc gaacggcagg ctgccgcccg gaccgctgag
     2101 gccgtctgag aatcgtcccc cggggccgac accgagcgtc agagtgaccg ggcaatcggg
     2161 tgaccgggcc agtagccgga ccggtaggta gagtcgctct atgaacatgc ttgcattcct
     2221 ggggacccag gaactgatca tcgtggcgat catcgcccta gtcctattcg gtgggaacca
     2281 gataccgaag ctggcccgca acctcggcaa ggcccagaag gagctccagc gggggctcgc
     2341 cgagggtcag gcagaagccg acaaacagtc ggaggcccaa ccggagaagg accaggagta
     2401 ggcgccccac gtggcgtccc ga
//
LOCUS       DASCMR010000415         3066 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001987696, whole genome shotgun sequence.
ACCESSION   DASCMR010000415 DASCMR010000000
VERSION     DASCMR010000415.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3066)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3066)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3066
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001987696"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..252)
                     /locus_tag="QGG16_09475"
     CDS             complement(<1..252)
                     /locus_tag="QGG16_09475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25543.1"
                     /translation="MNSATAGESIGADFRPFDCDNHYYECEDAFTRHVPEAMRHRVVQ
                     WVEMDGRRHHLVGGRLSNAVANPTWNPIARPGALHLYFRG"
     gene            318..1151
                     /locus_tag="QGG16_09480"
     CDS             318..1151
                     /locus_tag="QGG16_09480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012231397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HJP25544.1"
                     /translation="MSNGESGSYIFDTLLVTVTNHVATVVLNRPDAHNAFTAGMKRDC
                     RDLWEALRGDDDVRVIVLTGAGNRAFCTGIDRNEPFTALDDSPALYGTSNNFMYDDPG
                     DWLGPKSNDLWKPVIGAVNGMACGGAFYLLGECDVLIAADHATFFDPHVTYGMPAVYE
                     PMKMLGMMPFGELMRMSLTGNGERISADSAREMGLVSEVVPGDELNAAADRLACAIAA
                     NPPWAVQGTLRAIWAARDLGRLGSRTMAASILSAATDKAALSAGVEGFSSGERPEPRV
                     R"
     gene            complement(1195..2385)
                     /locus_tag="QGG16_09485"
     CDS             complement(1195..2385)
                     /locus_tag="QGG16_09485"
                     /inference="COORDINATES: protein motif:HMM:NF013775.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase"
                     /protein_id="HJP25545.1"
                     /translation="MAKRLPLNIPQTPGEITADWLTDVVQSSGMVTAARVVDFEVGSP
                     GSGVGFTGQTLRVGLTWDVVEDDAPSAVLVKFPSENAGNRGLAEAEGGYDREFDFYER
                     LAHLVPVRVPRLIHAVRDPGPSGAARKRRERIIDGLPAPVAKFIGRHARKMVRASRRR
                     YALVLEYVADTRVTTAQTFPPAEDLTEILHTLARLHAHFWRHPMLDDAAVIEWSMVTQ
                     MPNVMHGLYRAWRNEVVARRPDLFVERFMHHADWFGDNIERLVAHLNEPLALRHGDSR
                     TDNMLFTDSGMVLIDFGVSGSGRPAGDVAYLLSESIPPGPGAREAFLAGCCDYHAELV
                     AVGVDDHPLDAFLVDCEVVLAAQAYRAVLMEATYEADYDGESLAEIWGPRIGALLAEE
                     PPEI"
     gene            complement(2400..>3066)
                     /gene="selD"
                     /locus_tag="QGG16_09490"
     CDS             complement(2400..>3066)
                     /gene="selD"
                     /locus_tag="QGG16_09490"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004756 - selenide, water dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0001887 - selenium compound metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HJP25546.1"
                     /translation="DAGGFVIAGGHTVDDPEPKFGLAVVGEADPNRLLTNAGFRPGDV
                     LVLTKPLGVGVITTAIKQGDAPTDVIDAAQASMTRLNAEAATVALGCGATGATDVTGF
                     GLLGHLGRAVVESTVDATIEVGAVPLLPGTRELAESGAMPGGSRRNLDWADDLLDRGG
                     FGDLDALLMADAQTSGGLVFGVAPDRADEALVALAATGHVAAVVGHVVARGSDGSHRL
                     RLV"
BASE COUNT          551 a         1045 c          987 g          483 t
ORIGIN      
        1 cccgcgaaag tacaagtgaa gagctccggg ccgcgcgatc gggttccacg tcggattggc
       61 caccgcgttg gataggcgtc cacccaccag atggtgtcga cgtccgtcca tctccaccca
      121 ctgcaccacc cggtggcgca tggcctcagg tacatgccgg gtgaaggcgt cctcgcactc
      181 gtagtagtgg ttgtcgcagt cgaacgggcg gaagtccgct ccgatgcttt cccctgccgt
      241 tgcgctgttc acaaagcggg acagtaccga ccgaccgggg acgaggccga acggggcccg
      301 gcactagtgt cgggctgatg agcaatggtg agagcgggtc ctacatcttt gacacgctgc
      361 tggtgaccgt caccaaccac gtggccacgg tggtgttgaa ccgccccgac gcccacaatg
      421 ccttcaccgc cgggatgaag cgcgactgcc gtgacctgtg ggaggcgcta aggggcgatg
      481 acgacgtccg ggtgatcgtc ctgaccgggg ccggcaaccg ggcgttctgt accggcatcg
      541 accgcaacga gccgttcacc gccctcgatg attcgccggc gctgtacggc acgtcgaaca
      601 acttcatgta cgacgacccc ggtgattggc tgggaccaaa gtccaacgac ctctggaagc
      661 cggtgatcgg agccgtcaac ggcatggcct gcggcggcgc cttctacctg ttgggcgagt
      721 gcgatgtcct gatcgccgct gatcacgcca cgttcttcga tcctcacgtg acctacggga
      781 tgcccgcggt ctacgagcca atgaagatgc tggggatgat gccgtttggc gagttgatgc
      841 ggatgtccct taccggcaac ggcgaacgga tctcagccga ctcggcccgc gaaatgggcc
      901 tggtgtcgga ggtcgtccca ggtgacgaac tgaatgcggc ggccgaccga ctggcgtgcg
      961 ccattgccgc taacccgcct tgggcggtgc aaggaacgct gcgggccatc tgggccgccc
     1021 gtgaccttgg ccgactcggg agccggacca tggcggcgtc gatcctcagt gcggcgaccg
     1081 ataaggccgc gctgtccgcc ggagtcgaag gattcagctc cggcgagcga cccgaaccgc
     1141 gcgtccgcta agggaaacga gtatccggta gagggagggc gccagcccga ccgatcagat
     1201 ctccggcggt tcctcggcca acagggcacc gatccggggt ccccagatct cagccaacga
     1261 ctccccgtca tagtcggcct cgtaagtcgc ctccataagt accgcccggt aggcctgtgc
     1321 ggccagcacg acttcgcagt ccacgaggaa ggcatccaag gggtggtcgt ccaccccgac
     1381 ggccaccagt tcggcgtggt aatcgcagca acccgccaag aaagcctccc gggccccagg
     1441 acccggcggg atgctctccg aaagcaagta ggccacatct ccggccggac gacccgagcc
     1501 cgacacccca aagtcgatga gcaccattcc cgagtcagtg aagagcatgt tgtcagtccg
     1561 actgtcaccg tggcgcaggg ccagcggctc gttgaggtga gccacgagcc gttcgatgtt
     1621 gtcgccaaac cagtcggcgt ggtgcatgaa ccgctcgacg aaaagatcgg gacgtcgtgc
     1681 caccacctcg ttgcgccatg cccggtaaag gccgtgcatg acgttgggca tctgggtcac
     1741 catcgaccac tcgatgaccg ctgcatcgtc caacatcggg tggcgccaga agtgggcgtg
     1801 caggcgggcc agggtgtgga ggatctcggt caggtcctcg gcaggcggga aggtctgggc
     1861 cgtggtgacc cgagtgtcgg ccacgtactc cagaaccaac gcgtagcggc ggcgcgatgc
     1921 ccgaaccatc ttgcgggcgt ggcggccgat gaacttcgcc accggtgccg gcaacccgtc
     1981 gatgatccgc tctcgacgct tccgggccgc ccctgaaggt cccgggtctc gcaccgcgtg
     2041 gatgagccga ggcacccgaa cgggcaccag gtgggccagc cgctcgtaga agtcgaactc
     2101 ccggtcgtat ccaccctcag cctcggccaa cccacgatta cccgcattct cgctggggaa
     2161 cttcaccaac accgcgctcg gcgcgtcgtc ctccacgacg tcccacgtca atccgacccg
     2221 cagcgtctgg ccggtgaacc cgacgcctga tccggggctc cccacctcga agtcgaccac
     2281 tcgggcggca gtaaccatgc ccgaggactg cacgacgtcg gttagccagt cggcagtgat
     2341 ctcaccgggc gtctgaggga tgttgagagg aagtcgcttg gccacgttcc tcagggctcc
     2401 tagaccaatc gaaggcgatg ggaaccatca ctgcctcgag ccaccacatg tccgacaacc
     2461 gccgcgacgt ggccggtggc tgcaagcgcg acgagcgcct cgtcagcccg gtcgggagcc
     2521 acgccgaaca ccagaccccc cgaggtctgg gcatcggcca tgagcaacgc atcgaggtcg
     2581 ccgaagccgc ccctgtcgag gaggtcatcg gcccagtcca ggtttcggcg actgcctccg
     2641 ggcatggcgc cggactctgc cagttcccgg gtaccgggca acaggggcac cgcacccacc
     2701 tcaatggtgg cgtccaccgt cgattcgacc acggcccgac ccaggtggcc cagcagaccg
     2761 aagcccgtta cgtcggtggc acccgtggcc ccgcagccca gagcaaccgt cgccgcctcc
     2821 gcatttagac gggtcatcga ggcctgcgca gcatcgatca cgtcagtcgg agcgtcgccc
     2881 tgcttgatag ccgtggtgat cacccctacg cccaacggct tggtcagaac caggacgtcg
     2941 ccgggccgga agccagcgtt ggtgagcagt cggttgggat cggcttcccc gacgacggcc
     3001 aggccgaatt tgggctccgg atcgtcgacc gtgtggcccc cggcgatcac gaacccgccc
     3061 gcgtcg
//
LOCUS       DASCMR010000416         2719 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001992867, whole genome shotgun sequence.
ACCESSION   DASCMR010000416 DASCMR010000000
VERSION     DASCMR010000416.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2719)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2719)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2719
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001992867"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1105
                     /locus_tag="QGG16_09495"
     CDS             <1..1105
                     /locus_tag="QGG16_09495"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: protein motif:HMM:NF013327.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HJP25547.1"
                     /translation="GLDGGPRWSDDVPDDHESQQPVGDDLDAAAVFFDDGPLITSASA
                     EFDPPLLPPDEPLPDFSEQAEGGTVREPAPADPVPTAPVAPGPDRGSPAAGGRDMTMA
                     VVTGVGLGALALAAFRIGTDASVALVTILLVLAAAEFFMALRRAGYQPAALLGVVAVG
                     ALNLAAYWRFEAAVPLVLGLTVLFSLFWYLTGIDRQAPLLNVSVTLFGVLYVGLLGSF
                     AGLMLTDPNGTGMLLAAVLCTVGYDTGGLVVGRMFGRSPLSAVSPNKTTEGLIGGMAV
                     SFAMAVLVVGQITPFGQDPGDLGSAFVLGIVVALAAPLGDLCESMIKRDLGLKDMGTI
                     LPGHGGLMDRFDALLFVLPATYYTARLMDLFTG"
     gene            1119..2276
                     /gene="dxr"
                     /locus_tag="QGG16_09500"
     CDS             1119..2276
                     /gene="dxr"
                     /locus_tag="QGG16_09500"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HJP25548.1"
                     /translation="MPPTSVAVLGSTGSIGTQTLDVVAARPDEFDVVALGAARSVDLL
                     VEQAKAFRPEVVAIADASLGGAVEAGVPAGTTVLAGPDAMAEAAVSADVAINGVVGFA
                     GLPVTLAVLAAGHRLGLANKESLIAAGPVVQRVRATPGAELLPVDSEHCAIHQCLRAN
                     DVDERVDRIVLTASGGPFRGRTRADLASVTVEQALAHPTWSMGPKITVDSSTLMNKGL
                     EVIEAHELFGTDYDHIDVVVHPQSIIHSMVTFTDGATIAQLSNPDMRLCMGYALAWPD
                     RLDVPYGAIDWAVLDRLDFEAPDRDAFGCLDLAFAAGQAGRTAPAWLNAANEVAVAAF
                     LDGVLSWVGITELLTDVLEAWPGDEATDVDAVLDVDRRAREAATALVLSRS"
     gene            2282..>2719
                     /locus_tag="QGG16_09505"
     CDS             2282..>2719
                     /locus_tag="QGG16_09505"
                     /inference="COORDINATES: protein motif:HMM:NF014244.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HJP25549.1"
                     /translation="MRPAGSTDHHIRLALMAGALVSFTLIGGWPGLVVVMSFVAMLTL
                     HELGHFLVARWAGMQVTEFFLGFGPRLWSVQRGECTYGVKAIPAGAYVRITGMTSLDE
                     VDPSIEHRTYRAQSYPRRLAVALAGSATHFGVALLLLFVLYSMV"
BASE COUNT          366 a          905 c          905 g          543 t
ORIGIN      
        1 cggcctcgat ggcggtcccc gctggtccga cgacgtcccg gacgatcacg agtcccagca
       61 accggtgggc gacgaccttg atgcggctgc tgtgtttttc gacgacgggc cgttgatcac
      121 ctcggcgtcc gccgagttcg atcctccgct gctgccgccc gacgagccgt tgcccgactt
      181 cagcgaacag gccgaaggcg gaacggtgcg cgaaccggca cctgccgatc cggtgcccac
      241 cgcacccgtc gccccgggcc ccgaccgggg aagcccggcg gccggtggcc gcgacatgac
      301 catggcggtg gtgaccggtg tcggtctcgg agcattagcc ctagccgcct tccggatcgg
      361 cactgatgct tccgtcgccc tggtcaccat cctgctggtg ctggctgccg ccgagttctt
      421 catggcgcta cgccgcgccg gctatcagcc cgccgctctt ctcggtgtgg tggccgtcgg
      481 tgcacttaat ctcgccgcct actggcgatt tgaggcggca gttccgctcg tgctgggcct
      541 caccgtgctg ttcagcctct tctggtatct caccggtatc gaccgtcagg ccccgctgct
      601 gaacgtgtcg gtgaccctgt tcggcgtcct ctacgtcggg ttgctggggt cgttcgccgg
      661 gctgatgctg accgacccga acggcactgg gatgctcctg gccgctgtgc tctgcaccgt
      721 gggctacgac accggcggac tggttgtcgg tcggatgttc ggtcgtagcc cgttgtcggc
      781 cgtgagcccc aataagacca ccgagggcct catcggcggt atggccgtga gcttcgccat
      841 ggctgtcctg gtggtcggac agataacccc gttcggtcag gatcccggtg acctcggctc
      901 agccttcgtg ctgggcatcg tggtcgctct ggcggccccg ttgggcgatc tctgcgaatc
      961 gatgatcaag cgtgatctcg ggctcaagga catgggcacc atcctcccag gccacggtgg
     1021 actcatggac cgcttcgacg ccctgctgtt cgtcctgccg gccacgtact acacggcccg
     1081 gctgatggac ctgttcaccg gctgacccgg tcgatttcat gcccccgacc tcggtggccg
     1141 tgctcggttc gacaggttcg atcggcaccc agaccctcga cgtcgtggca gcgcgccccg
     1201 acgagttcga cgtggtggcc ctcggagccg cccgatccgt agatcttctg gtcgagcagg
     1261 cgaaggcctt ccgacccgag gtggtggcca tcgccgatgc atccctcggt ggcgccgttg
     1321 aggcgggtgt tccggcgggg accacggtgc tcgccggtcc ggatgccatg gccgaggccg
     1381 ctgtgtccgc cgatgtggcc atcaacggcg tggtgggttt cgccggactg ccggtcaccc
     1441 tcgctgtcct ggccgccggt caccgacttg gcctggccaa caaggagtcg ttgatcgctg
     1501 cgggcccggt cgttcaacgg gtccgggcca cgccgggcgc cgagttgttg ccagtggaca
     1561 gcgaacactg cgccattcac caatgcctcc gggccaacga cgtcgacgag cgggtggacc
     1621 gcattgtcct gaccgcctcc ggtggtccgt tccggggtcg gacccgagcc gatctggcat
     1681 cggtaaccgt tgagcaggca ctggcccatc cgacgtggtc catgggcccc aagatcaccg
     1741 tcgactcgtc gacccttatg aacaagggtc tcgaggtgat cgaggcccat gagttgttcg
     1801 gcaccgacta cgaccacatc gacgtggtgg ttcatccgca gtcgatcatc cactcgatgg
     1861 tgacattcac cgacggggcc accattgccc agctctcgaa cccggacatg cgactgtgca
     1921 tgggttatgc gctggcctgg ccggaccgcc tcgacgtgcc atacggagcg atcgactggg
     1981 cggtgctgga ccggctggac ttcgaagcgc cggatcgcga tgcctttggt tgcctggatc
     2041 ttgccttcgc tgccggtcag gccggtcgta cggcacccgc gtggcttaac gcagccaacg
     2101 aggtggccgt ggcggccttt ctcgacgggg tgctctcgtg ggtgggtatc accgagttgc
     2161 tcaccgacgt gctcgaggct tggccgggag acgaggccac cgacgtcgat gcggtcctgg
     2221 acgtcgaccg gcgggcacgt gaggccgcca cggccctcgt cttatctcgg agctgaaccc
     2281 ggtgcgtccg gcaggatcca cagaccacca catccgtcta gccctgatgg ctggcgccct
     2341 ggtctcgttc acactgattg ggggttggcc gggcctggtg gtggtgatgt cgtttgtcgc
     2401 catgttgacg ctccacgagc ttgggcactt tcttgtggcc cgatgggctg gcatgcaggt
     2461 aactgagttc ttcctcggat tcggaccccg gttgtggtcg gtccagcggg gtgagtgcac
     2521 ctacggggtg aaggcgattc cggcgggtgc ctacgtccgt atcacgggca tgaccagcct
     2581 cgacgaggtg gatccgtcga tcgagcaccg cacctaccgg gcccagtcat acccccgacg
     2641 gctggctgtg gccctggctg gctcggccac gcacttcggc gtggctctcc tgttgttgtt
     2701 cgtgctgtac agcatggtg
//
LOCUS       DASCMR010000417         1649 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001994785, whole genome shotgun sequence.
ACCESSION   DASCMR010000417 DASCMR010000000
VERSION     DASCMR010000417.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1649)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1649)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001994785"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            179..>1649
                     /locus_tag="QGG16_09510"
     CDS             179..>1649
                     /locus_tag="QGG16_09510"
                     /inference="COORDINATES: protein motif:HMM:NF012711.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HJP25550.1"
                     /translation="MSVEATEQGEGDTEAPDPMERVMALMAPGAPFEMGTEEVLGEEM
                     QVFVKRLGSLRDLLASSARHGDIDYAVFHDGDRRIALSFADNVRRVASVASALSDRGI
                     GAGDRVAILAANRPEWMLTFWATVSLGAVVVACNGWWTRDEIEHALGRTRPSLLVADR
                     PRLERLEGADPGMPVVVMEDDFDALADFAPDADLPDVDIDEDQPALMQFTSGTTGRPR
                     AAVLSHRSLIGFVQIVVFLGAAQGAQVGASTSGAARPRLAVFPMFHISGLQSASITPM
                     ATGAGNVWPMGRFDPATVIRLTTEERIYAWNGTATHIFRLLEHPDIEDLDVSLVETIA
                     IGGSATTPELLRATEERFPHLVNTFTSGYGSTEAGGMVSHASNEMLRANADSIGMAMP
                     TVSLKVVDEDGAELPEGENGAICVRSPLTMTGYWEDSEATTEALLEGRWLKTGDYGRL
                     EGGQLFLSSRLRDLILRGGENVYPGEVEARLEMHPAVVEC"
BASE COUNT          278 a          566 c          542 g          263 t
ORIGIN      
        1 acctccaggc ccacacccgc accctcatcg cagggttcaa ggtgcccgag cacgtgtggt
       61 tccgcgacga gtcgttgccc cgcaacgcca acggcaagtt cgtcaagcgc cagctccgcg
      121 aggaccttgt cggaacaccg acggccgtct gagccgactg cagccgaaga ggagactcgt
      181 gtcggtcgaa gccacagagc aaggggaggg cgacaccgag gcccccgacc ccatggaacg
      241 ggtcatggct ctcatggccc ccggtgcccc gttcgagatg ggcaccgaag aggttctcgg
      301 tgaggagatg caggtcttcg tcaagcgact cggctcgcta cgcgacctgc tggcatcgtc
      361 agcccgtcac ggcgacatcg actatgcggt attccacgac ggggaccggc gcatcgcact
      421 gtccttcgcc gacaacgtcc gtcgggtcgc ctcggtggct tccgcactgt ccgaccgcgg
      481 gatcggcgct ggtgaccgcg tggccatcct ggccgccaac cgcccggagt ggatgctgac
      541 gttctgggcc accgtgtccc tgggggccgt tgtcgtggcc tgcaacggat ggtggacccg
      601 cgacgagatc gaacacgcgc tgggtcggac ccgcccgtct ctgctggtcg ccgaccgtcc
      661 gcgcctcgag cgcctcgaag gcgccgatcc gggcatgccc gtcgtcgtca tggaggacga
      721 cttcgatgcc ctagccgact ttgcccccga cgccgacctg cctgacgtcg acatcgacga
      781 ggaccagcca gcgttgatgc agttcacctc gggaaccacg ggacgaccca gagcagcggt
      841 actgagccac cggagcctga ttggcttcgt ccagatcgtc gtcttcctcg gtgccgccca
      901 gggggcacag gtcggcgcct cgacgtcggg agcggcgcgc ccccggctgg ccgtgttccc
      961 gatgttccac atctcggggc tgcagagcgc cagcatcacc cctatggcca ctggtgccgg
     1021 caacgtctgg cccatgggcc gattcgaccc ggcgacggtc atccggctca ccaccgaaga
     1081 gcgcatctac gcctggaacg gtacagcgac ccacatcttc cggttgctgg aacaccccga
     1141 tatcgaagac ctcgacgtga gcctcgtgga gaccatcgcc atcggcggat cggccaccac
     1201 tcccgagctc cttcgggcca ccgaggagcg gttcccccat ctggtgaaca cctttacgtc
     1261 gggctacggg tcgacggagg ccggcgggat ggttagccac gccagcaacg agatgcttcg
     1321 ggcgaacgcc gacagcatcg gcatggccat gcccacggtg tcgctcaagg tcgtcgacga
     1381 ggacggtgcc gaacttcccg agggggagaa cggcgccatc tgcgtgcgta gcccgctcac
     1441 catgaccggc tactgggagg actccgaggc cactaccgag gccctcttgg aaggccgatg
     1501 gttgaagacc ggagactacg ggcgcctcga gggaggccaa ctgttcctgt ccagccggtt
     1561 gcgcgacttg atcctccgtg gcggcgagaa tgtctatccg ggcgaggtgg aggcccgact
     1621 ggagatgcat ccggcggtcg tggagtgcg
//
LOCUS       DASCMR010000418         7077 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001999326, whole genome shotgun sequence.
ACCESSION   DASCMR010000418 DASCMR010000000
VERSION     DASCMR010000418.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 7077)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7077)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7077
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001999326"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(178..1119)
                     /gene="trxB"
                     /locus_tag="QGG16_09515"
     CDS             complement(178..1119)
                     /gene="trxB"
                     /locus_tag="QGG16_09515"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004791 - thioredoxin-disulfide reductase
                     (NADP) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HJP25551.1"
                     /translation="MIIGSGPAGLTAAIYAARADLAPLVIEGEPSSNSDQPGGQLMLT
                     TEVENFPGFPEGVMGPQLMGDMRAQAARFGAEIVTAKVSRVDFAERPFRIWIGDPDAD
                     EPTHTADAVIVSTGARSVMLGLEAEQRLIGHGLSTCATCDGFFFRDQEIAVVGGGDSA
                     LEEAGFLTKFASKVTLVHRRDELRASKIMQQRALDNPKIEFSWNSTVDDVLGESKVEG
                     LALRDTVTDEKRVLPVTGVFIAIGHRPNTDLFNGILDMDEAGYLVTGADRSTTNVDGV
                     FACGDVQDHTYRQAITAAASGCMAAIDAERWLESRTD"
     gene            complement(1207..1539)
                     /locus_tag="QGG16_09520"
     CDS             complement(1207..1539)
                     /locus_tag="QGG16_09520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25552.1"
                     /translation="MMTPVDPHPTEDPTPGTPVRGDWASSLVDRFVEVVDQVRNVTTR
                     PIITLARALVFGLVMVCCAVAATVLAGIGLFRLLDVVLPGESWSAHLVLGATCCALGG
                     LLWSRRSP"
     gene            complement(1633..2469)
                     /locus_tag="QGG16_09525"
     CDS             complement(1633..2469)
                     /locus_tag="QGG16_09525"
                     /inference="COORDINATES: protein motif:HMM:TIGR00762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005504 - fatty acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HJP25553.1"
                     /translation="MTVRIVTDSACDLTEAEIEAHGIDLVPLSIRFGEDVQLDREELS
                     VDDFYRRMASSDELPQTAAPSPGAFAAVFQRRLDEGADAIVCINLSSGMSATMESSEL
                     GAREVDGDVRIVDSRSVTAGQGVMVLAAAIAAASGASADEIVALAEDIRDRTRVFAAI
                     DTLENLKKGGRIGNAQALLGSMLSIKPLIDVSSGIVEEAGRQRTRKKSLAWLRDRVAD
                     HVDEIETLSVMHAQADDVDDLVTMLSDLVDPSIIRVGVIGPVVASHGGPGVVGLCFTL
                     RP"
     gene            complement(2466..4436)
                     /locus_tag="QGG16_09530"
     CDS             complement(2466..4436)
                     /locus_tag="QGG16_09530"
                     /inference="COORDINATES: protein motif:HMM:NF039636.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6049 family protein"
                     /protein_id="HJP25554.1"
                     /translation="MQVLMTVLLAALLVSASAGATAEQARADGDSASLGLIAQSPWID
                     DDGDLALQLRITGDATGSHLRLGLHHPVDRRGLLALRDDPVLGVPESTLTIDVSDVIN
                     SAGVASLTLPVGPDGILRSRPGEVSPLTVELVAANGHLLDRLVTPVVHLPIVPAGEAA
                     AQRPLLVGISLDIDGPPPLRPDGRVELDEATVRYLGAVANAVLDHPGAPVDVRLPPAT
                     MAGLAHSDDLAHARLLAQLAAAVQSGGLHLRSSPFVTADPEAWRQAGRSDVHRDLLDH
                     GDQVLTEHLGAAPDRSVAVLEPTAVPSTLDLLNRLGTVHHVVSADHLDPRPITASHGS
                     THPARLLDAAGVAHPALVSDPDLARHLVDPRGSVSAAQQLVADLALLAWSDPTVTRTA
                     IITVPDGLTIDALTLGLVLGVLRDAPFLHLQSLPDLFEASLTADAAAAINYELWPDPV
                     ISVSRRATDRSLAETTVAAYTAMLGGPHPDAAALNDLLEVTAAAELDGDAMGAYLSAV
                     YATVSGVLDAFTTPSDQSVRLTARRADLPFTIHNGLNTDARVVLVLQSDGRIDFPDGD
                     VIEAVLVPGRNRIAVPVRARTSGDARLQVTVRSPDDARLLQLRSTQLMVRTTSLPGVG
                     VALFVGALAVLAIWWVRSARLRSTRTRLGESP"
     gene            complement(4526..5296)
                     /locus_tag="QGG16_09535"
     CDS             complement(4526..5296)
                     /locus_tag="QGG16_09535"
                     /inference="COORDINATES: protein motif:HMM:NF025054.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HJP25555.1"
                     /translation="MTSGGTVIRLSPWRGNTRTTQVVAVDGPPPRPDDVSDLIEYLGS
                     RGVREIMTTALGPIDQQSFTARGFDPQEHLLLMGRPVDPTNPSSRWTSRWTGRTPSRP
                     RTRPARRRDQDAVLELDDRAFAPFSPFWRFDRAALDEVGQATESHRRRVIRQRANRRT
                     GSTVIGHAITGRTTTIGFLQRLAVDPAAEGRGVGSALVVDALCWLRQTGAHEVWVNTQ
                     PDNDRARALYLRHGFTEREGGLDVLHRVIDDPAGDLVR"
     gene            5482..6507
                     /locus_tag="QGG16_09540"
     CDS             5482..6507
                     /locus_tag="QGG16_09540"
                     /inference="COORDINATES: protein motif:HMM:NF013046.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase"
                     /protein_id="HJP25556.1"
                     /translation="MSLLLVTDERFLDHRAGSRHPEQPARLTAVWEGLDAAGVDEAVI
                     RRAPRLADDADLMGVHPPAYLEKLAGIDAEGGGRCDPDTVMGPNSWMAARLAAGAGLV
                     AVDGLRAGHADLAFCAVRPPGHHATPDRSMGFCLLNNVAVAASALVGVGQRVAIVDVD
                     AHHGNGTQDVFYGDDQVLFVSCHQWPLYPGTGAADEVGTGAGVGTTINVPLPPGAAGD
                     DYRHVMGSVVVPAVERFAPDWLLVSAGFDAHRADPLTDMGLTSADYADLVVELVGLVP
                     TGRVVLFLEGGYDLGALADSAGATVAAVVGMDYRPEQATGRGRGGVVGEVDSLVVDLV
                     RRHGLED"
     gene            6511..>7077
                     /locus_tag="QGG16_09545"
     CDS             6511..>7077
                     /locus_tag="QGG16_09545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HJP25557.1"
                     /translation="MDGLSAIPDGTFDDIRAAVAPVAGPFHAAGHGLYLVGGLVRDRL
                     LRDDRTPDHDLTTDATPDRIRELVAEVADAVWLQGERFGTVGLRVGDVTMEITTHRAE
                     AYLSDSRKPVVRFSSELFEDLARRDFTVNAMAVDVADGMLHDPFGGRADLETRTLRTA
                     LDPVESFSDDPLRMLRAARFLSRYGLTPA"
BASE COUNT         1176 a         2114 c         2559 g         1228 t
ORIGIN      
        1 ggcggagcca atcgcctcgt cgaacgtggt ttctgacagg ttggtgatgg cgccggccat
       61 ggggtctcgc ttccctcggg tcccggagga caaattggtc gttgcctctg ccataggtcg
      121 tcgatcgatg acggtcaagg agaggtttct cgaggagcgt aggccgtcga ggggtgatca
      181 gtcggttcgg ctctccagcc aacgctcggc atcgatggcg gccatgcatc ccgaggctgc
      241 agcggtgatg gcctgccggt aggtgtggtc ctggacgtca ccacaggcga acacgccatc
      301 cacgttggtg gtcgaacggt ccgccccggt caccaggtag cccgcctcgt ccatatccag
      361 aatcccgttg aacaggtcgg tattggggcg gtggccaatg gcaatgaaca caccggtcac
      421 cggtagcacg cgcttctcgt cggtcaccgt gtcccgtagg gccaggccct cgaccttgga
      481 ctctccaagg acgtcgtcga ccgtggagtt ccaggaaaac tcgattttgg gattgtctag
      541 ggctcgctgc tgcatgatct ttgacgcccg tagttcgtcg cgacgatgga ccagcgtcac
      601 cttggaggcg aacttggtga ggaatccggc ttcttccagc gcggagtccc cgccaccgac
      661 aacggcgatt tcctgatcac ggaagaagaa gccgtcacag gtggcacacg tggagagccc
      721 atgtccgatc agccgctgct cggcctccag ccccagcatg accgaccggg ctccggtcga
      781 gacgatgacg gcatcggcgg tgtgagtggg ttcatcagcg tcgggatcac cgatccagat
      841 tcggaacggc cgttcggcaa agtcgacccg ggaaaccttg gccgtcacga tctcggcacc
      901 gaaccgggcg gcttgggccc gcatgtcgcc catgagttgg gggcccatca ccccttctgg
      961 gaagccggga aagttctcga cctcggtagt gagcatcaac tgaccaccgg gttggtcgct
     1021 gttcgacgaa ggttcgcctt cgatgaccag gggagcaagg tcggctctgg ctgcgtaaat
     1081 ggccgcggtc aggccagcgg gcccggatcc gatgatcacg acctcgcggt gggatgggac
     1141 ctgtccagat atgggtccag atacgggttc agacacgggt actccagaag ggagagagat
     1201 ttgggatcag ggacttcggc gggaccaaag gagtccgccg agtgcgcagc aggtggcacc
     1261 taggacgaga tgggctgacc agctttcacc gggaaggacg acgtcaagga ggcggaacag
     1321 gccgatgccg gctaggacgg ttgcagcgac ggcacaacac accatgacga gtccaaacac
     1381 cagggcacga gcgagggtga tgatcggccg tgtggtgacg tttcgaacct ggtcgaccac
     1441 ctcgacgaac cggtcgacga gcgacgaggc ccaatcgccc cgaacggggg tcccaggggt
     1501 ggggtcctcc gtggggtggg ggtcaaccgg cgtcatcatg gcgtcgagcc taccgatcac
     1561 cttctgggcc gccgccggag ctgactgcag atgaccagtc cggaacaggg gaatggggcg
     1621 ggaacaggtc gatcagggac ggagtgtgaa gcagagaccg accacgccgg ggcctccgtg
     1681 actggccacc accggtccga tcactcccac ccggatgatc gagggatcca ccaggtcgga
     1741 cagcatggtc actagatcgt ccacgtcgtc agcctgggca tgcatgacgg acagggtctc
     1801 gatctcgtcg acatggtcgg ctacccggtc ccgcaaccac gccaaggact tcttccgggt
     1861 gcgttggcgg ccggcctcct cgacgatgcc ggaactcacg tcgatgaggg gcttgatgga
     1921 gagcatgctc cccagcaggg cctgagcgtt gccgattcga ccacccttct tgagattttc
     1981 caaggtgtcg atagcggcga acacccgtgt gcggtcccgg atgtcttccg cgagggccac
     2041 tatctcgtct gctgacgcgc cactggcagc tgcgatggcg gccgcgagga ccatgacgcc
     2101 ctgtccggcg gtgaccgatc ggctgtccac gatgcgaacg tcgccgtcta cctcgcgggc
     2161 gcctagttcc gaggactcca tggtggccga catcccactg gagaggttga tgcacacgat
     2221 ggcgtcggca ccctcgtcga ggcgacgttg gaatactgcg gcgaatgccc cgggggacgg
     2281 tgcagcggtc tggggaagct catcggacga cgccatgcgg cggtagaagt cgtcgacgga
     2341 caactcttcg cggtccagtt ggacgtcttc gccgaatcgg atgctcagcg ggaccaggtc
     2401 gatgccgtgg gcttcgatct cggcctcggt gaggtcgcag gcgctgtcgg tgacgatgcg
     2461 gacggtcatg ggctctctcc aagtctggtg cgcgtcgagc gtagtcgggc tgagcgaacc
     2521 caccagatgg ccaggacggc gagtgcacca acgaacaacg ccacaccgac gcccgggagg
     2581 ctggtggtac gcaccatgag ttgtgtcgac cggagctgga ggagtcgggc atcgtcgggg
     2641 gatcggacgg tgacctggag tcgggcgtca cctgacgtcc tggcccggac gggcacggcg
     2701 atccggttac gaccggggac cagcacggcc tcgatgacgt caccgtcggg gaagtcgata
     2761 cgaccgtcgc tctggaggac aagcaccacc cgtgcgtcgg tgttcaggcc gttgtgaatg
     2821 gtgaacggca ggtcggctcg gcgtgccgtg agtcggacgc tctggtccga tggggtggtg
     2881 aacgcgtcga ggacaccgga caccgtggcg tacacggccg acaggtatgc gcccatcgca
     2941 tctccgtcga gttcggcagc cgcggtgacc tctagaaggt cattgagagc cgcggcgtcg
     3001 gggtgggggc cacccaacat ggcggtgtag gccgccaccg tggtctcggc gagactccgg
     3061 tcggtggccc gccgggagac cgatatgacg gggtccggcc agagctcgta attgatggcg
     3121 gccgctgcat cggcggtcaa cgacgcctcg aacaagtctg ggagcgactg cagatggagg
     3181 aagggcgcat ccctcagaac tccgaggacc agacccagag ttagggcgtc gatggtcagg
     3241 ccgtcgggca cggtaatgat ggccgttcgg gtcaccgtgg ggtccgacca ggccagcaga
     3301 gctaggtcgg ccaccagttg ctgggcagcg gataccgatc cccgggggtc gaccaggtgt
     3361 cgggccagat cgggatcaga taccagcgcc gggtgggcga ccccggccgc atcaaggagt
     3421 cgggcgggat gggtggagcc gtgtgacgcg gtgatcggac gggggtcaag gtgatcagcg
     3481 gagacgacgt ggtggacggt tcccagtcgg ttcaaaagat cgagggtgga gggaaccgcg
     3541 gtgggttcga gtacggcgac tgatcggtcg ggggcggcgc cgaggtgttc ggtcaggacc
     3601 tggtcgccgt ggtcgagcag atcccggtgg acgtcggagc gtccagcttg tcgccatgct
     3661 tctggatcgg cggtcacgaa cggcgatgac cggaggtgga ggccaccaga ctgcacggct
     3721 gccgctagtt gggccaagag gcgggcgtgg gccaggtcat cagagtgggc cagaccggcc
     3781 atggtggctg gcggcagacg cacgtccacc ggtgcgccgg gatggtcgag aacggcgttg
     3841 gccaccgcgc cgaggtatcg caccgttgcc tcgtccagtt cgacccgccc gtcggggcga
     3901 agcggtggcg gtccgtcgat gtccagcgag atcccgacaa ggagtggtcg ttgggcggcc
     3961 gcttcgccag cgggcacgat cgggagatgg accaccgggg taaccagtcg gtccaatagg
     4021 tggccgttgg cggccaccag ctcgacggtt aatggggaga cttcgccggg tcgcgagcga
     4081 aggatcccgt caggaccgac tggcagggtg agtgaggcca cgccggccga gttgatgacg
     4141 tcggagacgt cgatggtgag ggtggactcc gggactccga gcaccgggtc gtcccggagg
     4201 gccaggagac cacgacgatc cactgggtgg tggagtccaa ggcggaggtg ggagccggtg
     4261 gcatctccgg tgatcctcaa ctggagggcc agatcgccat cgtcgtcgat ccatggcgac
     4321 tgtgcaatga gaccgaggct ggccgagtca ccgtcggctc gcgcctgttc ggccgtcgcc
     4381 cccgcggatg cagataccag cagggctgcg agcaggacgg tcataaggac ctgcatcagg
     4441 accttctgcc gactggtcgg ctggaggggc tgtccgaacc acctcgtggg gttggccgag
     4501 acggccgtgg ttattcgttg ccggttcatc tgaccagatc tccggccggg tcgtcgatca
     4561 ccctgtggag gacgtcgagg cccccctccc gttcggtgaa tccgtggcgg aggtagaggg
     4621 cacgggcgcg gtcgttgtcg ggctgggtgt tcacccagac ctcatgggcc cccgtctggc
     4681 gcagccagca aagtgcgtcg acgaccaggg ccgagccgac gcctcggccc tcggccgccg
     4741 gatcgacggc cagacgctgg aggaatccga tggtggtcgt tcgtccggtg atggcgtgac
     4801 cgatcaccgt ggaacccgtc cgtcggttgg cccgctgtct gatcacgcgt cgacgatgag
     4861 attcggtggc ctgccccacc tcgtcgaggg cggccctgtc gaatcgccag aagggcgaga
     4921 acggggcgaa tgctcggtca tccagttcta gtacggcgtc ctggtcccgt cgacgggcgg
     4981 gtcgggtacg gggacgactg ggggtacgtc cagtccagcg tgatgtccag cgggaggatg
     5041 ggttcgtcgg gtcgacaggt cgacccatga gtaggaggtg ttcctgaggg tcgaacccac
     5101 gtgctgtgaa cgattgttgg tcgatcggtc ccagcgcagt ggtcatgatc tcccggacgc
     5161 cccgggagcc gaggtactcg atgaggtcgg acacgtcgtc gggacgtggt ggtggcccgt
     5221 ccacggccac tacctgggtg gtccgggtgt tgccacgcca tggactcaga cggatgaccg
     5281 tgccgccgct ggtcatgaac cgttcgatac agggaacacc ggaacccggc agcccgacag
     5341 gcggctgggc gacgcgaccc gaggggaagg gttcgtcgac ggaggttcgt tcggtccgga
     5401 cgtcgattcc gacagggtat gacttgcccg actggccaga ggggtcggaa cctccggggg
     5461 cacggaggtt acgctcgcta gatgtcgctc ctcctggtga ccgacgagcg gtttctggac
     5521 caccgggcgg gatcccgtca cccagagcag cctgctcgcc tgacggccgt gtgggagggg
     5581 ctggacgccg caggcgttga tgaggcggtc atccgtcgtg cgccgcgcct ggccgatgat
     5641 gcggacctga tgggcgtcca tccgccggcg tacctcgaga agctggctgg gatcgatgcc
     5701 gagggtggtg gccggtgcga tcccgacacg gtcatgggcc cgaattcctg gatggcagcc
     5761 cgactagcgg ccggcgcggg cctggtggcg gttgatgggc ttcgtgccgg tcacgccgac
     5821 ctggccttct gtgcggtacg acctccaggg catcacgcca cgcccgaccg gtccatgggg
     5881 ttctgtcttc tcaacaacgt ggcggtggcc gcctccgctc tggtaggagt cggtcaacgg
     5941 gtggccatag tcgacgtgga cgcccaccac ggcaacggca cccaggacgt cttctacggt
     6001 gatgaccagg tgctgttcgt gtcgtgccac cagtggccgc tgtatccggg taccggcgcg
     6061 gccgacgagg tcggtacagg tgcgggagtc ggcaccacga tcaacgttcc ccttccccct
     6121 ggcgcggccg gcgatgacta ccgccacgtc atggggtcgg tggtggttcc cgccgttgag
     6181 cgttttgctc ctgattggct gctcgtctct gcaggcttcg acgcccaccg ggccgatccg
     6241 ctgacggaca tgggtctgac ctcggccgac tacgcagacc tggtcgtcga actggtgggg
     6301 ctggtcccga cgggccgggt ggtgttgttc ctggaaggcg ggtacgacct tggtgcactc
     6361 gccgattcgg ccggggccac cgtggcggcc gtcgtcggca tggattatcg gcccgaacag
     6421 gccacaggtc gagggcgcgg cggtgtagtg ggcgaggtcg attccctcgt ggtggatctg
     6481 gttcgacgcc acggcttgga ggattgaacg gtggacgggc tctccgccat tcctgatggg
     6541 acgtttgacg acatccgcgc tgcagtggcg ccagtggccg ggccattcca cgcggccggg
     6601 cacggtctct atctagtcgg cggactggtc cgtgaccggc tcctgcgcga tgaccggacg
     6661 cccgatcacg acctgaccac tgacgccacc cctgaccgga tccgggaact ggtggccgaa
     6721 gtggctgatg cagtgtggtt gcagggcgag cggttcggca cggtcggact gcgggtgggc
     6781 gacgtcacca tggagatcac cacccatcga gctgaggcct acttgagcga ctcccgtaag
     6841 ccggtggtgc gattctccag cgagctgttc gaggacctgg ctcgtcggga tttcacggtc
     6901 aacgcaatgg ctgtcgacgt agctgacgga atgttgcacg atccgttcgg tggtcgcgcc
     6961 gacctggaga cccggaccct acggactgcg ttggatccgg tggagtcgtt ttccgatgac
     7021 ccgctgcgaa tgttgcgggc tgccaggttc ttgtcccggt atgggttgac gcctgcc
//
LOCUS       DASCMR010000419         2598 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000001999433, whole genome shotgun sequence.
ACCESSION   DASCMR010000419 DASCMR010000000
VERSION     DASCMR010000419.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2598)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2598)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2598
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000001999433"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..>2598)
                     /gene="rpoC"
                     /locus_tag="QGG16_09550"
     CDS             complement(<1..>2598)
                     /gene="rpoC"
                     /locus_tag="QGG16_09550"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012227938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HJP25558.1"
                     /translation="DWECYCGKYKRVRFKGIICERCGVEVTRSKVRRDRMGHIELAAP
                     AVHIWYLRGTRSWLAYLLMGTEPREELKAKQLEKVIYFAANLVVWVDEDKRHEDLPEL
                     ESELAEERLAIEEERDRELNRRQEDLESELAEMEAEGSKESDLKARAKAADKDLQFIR
                     DQYEQELDVLNRAWDEFTSLFARQIIEEDMLWRELEDRWGEYFEGGMGADALAQLIER
                     IDFDDEEVKLRELIDPPEGQKPLSAQRKQKAIKRLKIVAAFNRRDEHGRRVNEPRAMI
                     LDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPGIIVNNEK
                     RMLQEAVDALFDNGRRGRPVTGPGNRALKSLSDMLKGKQGRFRQNLLGKRVDYSGRSV
                     IVAGPTLKFHQCGLPKVMALELFKPFVMKKLVEEELAQNIKSAKRMVERRKPQVWTVL
                     EDVIREHPVMLNRAPTLHRLGIQAFEPVLVEGKAIRIHPLVCAAFNADFDGDQMAVHL
                     PLSAEAQAEARVLMLSANNVLSPAHGRPLVTPTQDMVIGAYYLTAEGEGLTGEGKVFR
                     DINDLRWAWETGAVHLHARIQYRSSEYPELIDTPANGVAATWHTTTPGRVFFNAALPG
                     HEIEPLEVGGHRAKMIMFVNQQVGKSELGTIVDDLARGYPKKVVAESLDAMKDACFDF
                     ATRSGLTVSIDDVKTPPEKAAILDAHEKRAEKVEAQFRKGIITDGERRQMEVEIWNSA
                     TAEVTDKMVDALEADEANSIDMMVKSGARGNMMQVRQIAGMRGLVANPRGDMIPRPIK
                     SNFREGLAMLEYFIATPGARKGLVDTALRTADSGYLTRRLVDVSQELIINDVDPFASE
                     MGVRGIWID"
BASE COUNT          443 a          844 c          815 g          496 t
ORIGIN      
        1 cgtcgatcca gataccacgc actcccatct cggatgcgaa cgggtcaacg tcgttgatga
       61 tgagttcctg ggacacgtcg accagtcgac gggtcaggta accggagtca gcggtccgca
      121 gagcggtatc gaccagaccc ttacgagcac ccggtgtggc aatgaagtac tccaacatcg
      181 ccagtccctc acggaagttg gacttgatgg ggcggggaat catgtcgcca cgagggttgg
      241 ccactagacc gcgcatgccg gcgatctggc gaacctgcat catgtttcca cgagcacccg
      301 acttgaccat catgtcaatc gagttggcct cgtcggcctc cagggcgtcg accatcttgt
      361 cggtcacctc ggcggtcgcg gagttccaga tctcgacttc catctgccga cgctcgccat
      421 cggtgatgat gcccttccgg aactgggcct cgaccttctc ggcacgcttc tcgtgcgcgt
      481 cgaggatggc tgccttctct ggcggagtct tgacgtcgtc aatggacacc gtcagacctg
      541 agcgggtggc gaagtcaaag catgcgtcct tcatggcgtc gagggactcg gccaccacct
      601 tcttcgggta gccacgggcc aggtcgtcca cgatcgtgcc cagctcggac ttaccgacct
      661 gctggttaac gaacatgatc atcttggctc gatggccgcc gacctcgagg ggctcgatct
      721 cgtggcccgg gagggcggcg ttgaaaaaca cgcggcccgg cgtggtggtg tgccacgtgg
      781 cggccacgcc gttggccggc gtatcgatga gctccgggta ctccgacgag cggtactgga
      841 tgcgggcgtg caggtgcacg gccccggtct cccaagccca tcggaggtcg ttgatgtccc
      901 gaaagacctt gccctcaccg gtcaggccct cgccctcggc ggtcaggtag taggcaccga
      961 tgaccatgtc ctgggtcggg gtgaccagcg gacgaccgtg ggccgggctg agcacattgt
     1021 tggccgacag catcaacact cgtgcctcgg cctgagcctc ggccgacaac ggcaggtgga
     1081 cggccatctg gtcaccgtcg aagtcggcgt tgaacgccgc gcagaccaac gggtggatac
     1141 gtatggcctt gccctccacc aggaccggct cgaaggcctg gatgcctaga cggtgcaggg
     1201 tgggggcacg gttcagcatc accgggtgct cgcgtatgac gtcctcaagg acagtccaca
     1261 cctgaggctt gcgccgttcg accatacgct tggccgactt gatgttctgg gccagttcct
     1321 cctcgaccag cttcttcatg acgaacggct tgaacagctc tagcgccatg accttgggca
     1381 ggccgcactg gtggaacttg agggtcgggc cggccacgat gaccgaacgg cctgagtagt
     1441 cgacgcgctt gccgagcagg ttctgacgga accgaccctg cttgcccttg agcatgtccg
     1501 agagggactt cagcgcgcgg ttacccggac cggtcaccgg acgaccccga cggccgttat
     1561 cgaacagtgc gtcgacggcc tcctggagca tccgcttctc gttgttgacg ataatccccg
     1621 gggcacccag gtcgagcagc cgctttaggc ggttgttccg gttgatcacc cggcggtata
     1681 ggtcgttgag gtccgaggtg gcgaagcgac caccgtcgag ctggaccatg ggacgaagct
     1741 cgggcgggat gaccggcacg gcgtcgagga tcatggcgcg cggctcgttg acccggcggc
     1801 cgtgctcgtc acgacggttg aaggcagcca cgatcttgag gcgcttgatg gccttctgct
     1861 tgcgctgagc cgacaggggc ttctggccct ccggcggatc gatcagctca cgaagtttga
     1921 cctcttcgtc gtcgaaatcg atccgttcga tgagctgggc cagggcatcg gcgcccatgc
     1981 caccctcgaa gtactcaccc cagcgatcct cgagttcacg ccacagcatg tcctcctcga
     2041 tgatctggcg ggcgaacagg ctggtgaact cgtcccatgc gcggttcaga acgtcgagtt
     2101 cctgctcgta ctggtcgcga atgaactgga ggtccttgtc ggcggcctta gcgcgagcct
     2161 tgaggtccga ctccttggag ccctcggcct ccatctcggc cagctcggac tcgaggtcct
     2221 cctggcgacg gttcagctcg cggtcacgct cctcctcgat ggcgaggcgc tcctcggcca
     2281 actcggactc caactccgga aggtcctcgt gacgcttatc ctcgtccacc cacacaacca
     2341 ggttggccgc aaagtagatg accttctcca actgcttggc cttgagctcc tcacggggct
     2401 cggttcccat cagcaggtag gccaaccagg aacgggtgcc ccgcaggtac cagatgtgga
     2461 cggccggcgc ggccagctca atgtgcccca tgcggtcgcg ccgcaccttg gaccgggtca
     2521 cctcgacgcc gcaacgctcg cagatgatgc ccttgaaccg gacccgcttg tacttgccgc
     2581 aatagcactc ccagtcct
//
LOCUS       DASCMR010000420         1810 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002000882, whole genome shotgun sequence.
ACCESSION   DASCMR010000420 DASCMR010000000
VERSION     DASCMR010000420.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1810)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1810)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1810
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002000882"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..228)
                     /locus_tag="QGG16_09555"
     CDS             complement(<1..228)
                     /locus_tag="QGG16_09555"
                     /inference="COORDINATES: protein motif:HMM:NF013891.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-recycling factor"
                     /protein_id="HJP25559.1"
                     /translation="MSDEMIQMVLDEASSSMSDAVTHSRREFSTIRTGRASSSIVEKI
                     MVLAYGVEMRMQELASFSIPEPWQLLLTPHDP"
     gene            complement(344..1081)
                     /gene="pyrH"
                     /locus_tag="QGG16_09560"
     CDS             complement(344..1081)
                     /gene="pyrH"
                     /locus_tag="QGG16_09560"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HJP25560.1"
                     /translation="MSGGERIPGRWGRVVLKVSGEAFAGEAGYGIDGEIVGRIAQEIC
                     SVRTEFEVDIAVVVGGGNIWRGMSGAGAGMDRAQADYMGMLATTINALALQDTLEQMG
                     QPTRVQNAVHMAQIAEPYIRRRAIRHLQKGRVVIFAGGTGNPFFTTDTAAALRAVEIE
                     AGAVLKGTHSGTDGIYTADPKLDPEATRLEEVTYLEVIQKGLRAMDATAITLCMDNAL
                     PIVMFDLMASGNVRAILAGESVGTLVS"
     gene            complement(1084..>1810)
                     /gene="tsf"
                     /locus_tag="QGG16_09565"
     CDS             complement(1084..>1810)
                     /gene="tsf"
                     /locus_tag="QGG16_09565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HJP25561.1"
                     /translation="AKKALIESDGDFEAAAQMLREMGLAKAATRSDRDNVEGAIGLVA
                     DGQRAALVHLKCETDFSAKSDGFLSLVDELTNAVLTEGEGAVDARSSAIDDLRLSIKE
                     NIEVGRVSLIEAGDGNMIDTYLHVQDGRGVNGVVVEGSGVDQETLHQVALHIAFAKPT
                     TLTRDEVPSDLVDKERAALLEITKAEGKPEQAWDKIVEGRLTGWFRETVLLEQGLHGD
                     KTSVGDTLAGGSIERFAQAYLGA"
BASE COUNT          310 a          593 c          570 g          337 t
ORIGIN      
        1 cggatcgtgg ggagtcagca gcagctgcca gggctccggg atcgagaaac tggctagttc
       61 ctgcatccgc atctcgacgc cgtaggccag caccatgatc ttttcgacga tggacgatga
      121 ggcacggccg gtacggatgg tggagaactc ccgacgggaa tgggtcacgg cgtcggacat
      181 gctcgacgag gcctcgtcga gcaccatctg gatcatttcg tcgctcactg catcccccgg
      241 tccatccggc cttcctatcc accggcgacc cgtgggccac cagatggcca ccgggcgcgg
      301 tgcccggcgg tatcccggtc gacgagccga ccgggccgac cggttacgag accagcgtgc
      361 ccaccgactc tccggcgagg atggctcgga cgttacccga ggccatcagg tcaaacatga
      421 cgatcggcag ggcattgtcc atgcagagtg ttatggccgt ggcgtccatt gcccgcaaac
      481 ccttctggat cacctcgagg taggtgacct cttcgagccg ggtggcctca ggatccaact
      541 tgggatcggc cgtgtagatc ccgtcggtgc ccgaatgggt tcccttcagg accgctccgg
      601 cctcgatctc gaccgcccgt agcgcggccg ctgtatccgt ggtgaaaaac gggttacccg
      661 ttccaccggc gaagatgacc acacggccct tctgtagatg ccggatggcc cgacgacgga
      721 tgtacggctc ggcgatctgg gccatgtgga cggcattctg aacacgggtc ggctgaccca
      781 tctgttcaag cgtgtcctga agggcgaggg cgttgatggt ggttgccaac attcccatgt
      841 agtcggcctg agcgcggtcc attccggcac cagctcccga cataccgcgc cagatgttgc
      901 cgccaccgac tacgaccgct atatcgacct cgaattcggt ccggaccgag cagatctcct
      961 gggcgatccg accgacgatc tcgccgtcga tgccgtagcc ggcttcaccg gcgaaggctt
     1021 caccggagac cttgaggacc acccggcccc agcgacctgg gatccgttcg cccccgctca
     1081 cgttcaggcg cctaggtagg cttgggcgaa ccgctcgatg cttccaccag caagggtgtc
     1141 gcccaccgag gttttgtcgc cgtggagacc ctgttcgaga agcacggtct cacggaacca
     1201 gccggtgagc cgtccctcga cgatcttgtc ccaggcctgt tcgggcttgc cctcggcctt
     1261 ggtgatctca agcagcgcag cccgctcctt gtcgaccagg tcagaaggga cctcgtcgcg
     1321 agtcaaggtg gtgggtttgg caaaggcgat gtggagcgcc acctggtgga gggtctcctg
     1381 gtcgacgccg gagccttcga ccaccacgcc gttcacgccg cgcccgtcct gaacgtgcag
     1441 gtaggtgtcg atcatgttgc cgtcgccagc ttcgatgagc gaaacccggc cgacctcgat
     1501 gttttccttg atggagaggc gcaggtcgtc aatggccgat gagcgggcat cgaccgcccc
     1561 ttcgccttca gtcaggacgg cgttggtcaa ctcgtcgacg agggagagga atccgtcaga
     1621 cttcgccgag aagtcggttt cgcacttcag gtgcacgagg gcagcccgct gaccatcagc
     1681 cacgagacca atggccccct cgacgttgtc acggtccgag cgggtggccg ccttggctag
     1741 acccatttct cggagcatct gcgcggcggc ctcgaagtcg ccgtcggact cgatcaacgc
     1801 cttcttggcg
//
LOCUS       DASCMR010000421         3098 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002013442, whole genome shotgun sequence.
ACCESSION   DASCMR010000421 DASCMR010000000
VERSION     DASCMR010000421.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3098)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3098)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3098
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002013442"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            223..903
                     /locus_tag="QGG16_09570"
     CDS             223..903
                     /locus_tag="QGG16_09570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HJP25562.1"
                     /translation="MSTRILTVEDDERIRTAVRLALEEEGWDVEETASGEEALEAFTR
                     QPADVVLIDIMLPGIDGFEVCRNIRRLGDVPIVMVTARSDSHDVVAGLEAGADDYLRK
                     PFDPKELSARIRALLRRVRTDDGPPTRIQVGQLEVLPEEGVVRHAGDDVHLTRTEFRL
                     LVELAAADGRVLSREDLLEKVWGYDYFGDGRLVDVHVRRLRTKIEPDPANPRYVMTVR
                     GMGYKLQI"
     gene            926..2344
                     /locus_tag="QGG16_09575"
     CDS             926..2344
                     /locus_tag="QGG16_09575"
                     /inference="COORDINATES: protein motif:HMM:NF014567.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HJP25563.1"
                     /translation="MTGRPVADDASRLGLGGRIAMLFAVGGLLVSSLLAVSTLVMTRR
                     QLVESREGAAAAMAVGNATRLSNQLTPDSTIEDLPTIADSLTRLEGGQRIIRLGDDWL
                     PAPELDHDDLPLDLLERLEQRAAGQVLAPVRGDPHFVVGIPLTAFDADYYAVVDLVEV
                     SDTLDDLRIILLGAGAVTTVLAALLGSWASTRVLRPLRRIRGAAEAIAGGRLDTRLSP
                     QADPDLDRLSDSFNEMARALEDRIHRDARFASDVSHELRSPLTTLMAGVGVLDARRDE
                     LSERSRTALDLLVQDLERFNRLVNELMEISGYDAGVADLDLSEVDVVRFLQATVAADP
                     ALVLTIPPTTGSLVINADKRRLARVMANLLDNARRYGGGITAVILEHDETIRIAVEDE
                     GPGIPKTERHEIFDRFARGSTGGRRGDHSGTGLGLSLVAEDLRLHRGRVWAEDRTDGR
                     EGARFVLELPLSLTLGNSEVEW"
     gene            2344..2994
                     /locus_tag="QGG16_09580"
     CDS             2344..2994
                     /locus_tag="QGG16_09580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25564.1"
                     /translation="MRAIVGAIARGRWAAPVLIAAITFAACGIPLDDATRDLSVDLPD
                     ALLPAASTTTEAPAPTETVQIFLARVDAADRQILEPVDRDIQGDGSINVILAEVFAGP
                     SADEQDAGLISPFAEGSEVIGTVLEDGLLEVHLDTLEGFPHDDSAGNRLAFAMLVCTA
                     DRLVAGAEIDRVVVLLEGETGLEAINVPVSDGEPPEEGAPVSCANYLSLLPGQPEG"
BASE COUNT          544 a         1037 c          981 g          536 t
ORIGIN      
        1 gtcccacaac cggagaaatg accgtggccg ccccccttgc catccacgga ccgctactgg
       61 atctgctccg atctgccggc gccgaccgtg tctaatccag ctacccagca ggattcctcc
      121 gatggctcta ttggagccat ggccggtagc gctatggaga agcgagacgc cgagatacac
      181 gatgaggcga caagcagtgc tcccatgggg cagcatcgtg gggtgagcac ccgaatcctg
      241 accgtcgaag acgacgaacg cattcgaact gctgtccgcc tagccctcga agaggagggc
      301 tgggacgtcg aggagacggc cagcggcgaa gaggcactcg aggcgttcac ccgccagccc
      361 gctgacgttg ttctcatcga catcatgctt cccggcatcg acgggttcga ggtgtgtcgg
      421 aatattcgtc gcctcggcga cgtccccatc gtcatggtca ccgcccggtc cgacagccac
      481 gacgtggtcg ccggcctcga agccggtgcg gacgactacc tccgcaaacc gttcgacccc
      541 aaggaacttt cggcgcggat acgggccctt ctccgacgtg tccggaccga cgatggccca
      601 ccgactcgaa tccaggtcgg gcaactggag gtcctgcccg aggagggcgt ggttcgccac
      661 gcgggagacg acgtccacct cacccgcacc gaatttcgac ttctggtgga gttggccgcc
      721 gccgacggtc gggtactgag ccgcgaggac ctcctcgaga aggtctgggg atacgactat
      781 ttcggagacg gccgacttgt cgacgtccat gttcgacgac tcagaaccaa gatcgaaccc
      841 gacccagcaa acccccggta cgtgatgact gtccgaggca tgggctacaa gctccagatc
      901 tgaaacgatc ctcttgaatt cacccatgac cggcagacca gtggccgatg atgcgagccg
      961 cctcggactc ggcggccgga tcgccatgct gttcgcggtg ggcggcctgt tggtgtcgag
     1021 cctgttggcc gtcagcacgc tggtaatgac tcgacgccag ctcgtggagt ctcgggaagg
     1081 cgcggcagcg gccatggccg ttggtaacgc cacccgactc agcaatcagc tcacccccga
     1141 ctccaccatc gaggaccttc cgaccatcgc cgactcgttg actcggctcg aaggtggcca
     1201 gcggatcatc cgactcgggg acgactggct ccccgctccc gagctggacc acgacgacct
     1261 cccacttgat ctcctcgaac ggctcgagca gcgcgccgcc ggccaggtac tcgctccggt
     1321 gcgcggggac ccccacttcg tggtcggcat ccccctgacc gcatttgacg ccgattacta
     1381 cgccgtagtc gatctggtcg aggtctccga cacgctcgat gacctgcgga tcatcctgtt
     1441 gggggctggc gcggtgacca ccgtgttggc ggccctcctc gggtcatggg ccagcacccg
     1501 ggtactccgg cctctccgaa ggatccgggg ggctgccgag gctattgccg gtggccgtct
     1561 cgatacccgg ctcagcccgc aggccgatcc cgacctggat cgcctctcgg actccttcaa
     1621 cgaaatggcc cgagcccttg aagatcgaat ccaccgcgac gcgcgcttcg cctccgatgt
     1681 cagccacgaa ctccggagcc cgctcaccac cctcatggcc ggcgtcgggg tgctggatgc
     1741 ccgccgtgac gagctctcgg agcggtcccg taccgccctc gacctcctcg tgcaggacct
     1801 ggaacggttc aaccgcctag taaacgagtt gatggagatt tcgggttacg acgccggcgt
     1861 ggccgacctg gacctctccg aggtggacgt cgtccggttc ctgcaggcca ctgtcgccgc
     1921 cgacccagca ctcgtcctaa ccatcccgcc caccaccggg tcactggtca tcaacgccga
     1981 caagcggcgt ctggccaggg tcatggccaa cctgttggac aacgcccgcc ggtacggcgg
     2041 tggtatcacc gccgtcatct tggaacacga tgagacaatt cgcatcgccg tcgaggacga
     2101 gggaccgggt attccaaaga cggagcgcca cgagatcttc gaccggttcg cccgcggctc
     2161 aaccggcggt cgtcgtggtg accacagcgg cacagggctg gggttgagcc tcgtggccga
     2221 ggatctccgc ctccaccggg gacgcgtgtg ggccgaagat cgaacggatg gacgcgaggg
     2281 tgcccgtttc gtcctggaat tgccgctttc cctgaccctc gggaactcgg aggtggagtg
     2341 gtgatgcgtg ccatcgtcgg agccatcgct cgagggcggt gggcagcacc ggtcctcatt
     2401 gcggcaatca cgtttgccgc ctgtggcatt ccactggacg acgccacccg cgatctgtcc
     2461 gttgatctac ccgacgccct ccttccggct gcgtcgacca ccaccgaggc gccggcaccc
     2521 accgagaccg tgcagatctt tcttgcccgg gtcgacgccg cagaccgtca gatcttggaa
     2581 ccggttgacc gagacattca gggcgacggc tcgatcaacg tgatcctggc cgaggtattc
     2641 gctggaccga gtgcggatga acaggacgcg gggttgatct cgccgttcgc cgagggcagc
     2701 gaggtgatcg gaaccgtgct cgaggacgga cttctggagg tccacctcga caccctggaa
     2761 ggctttcccc atgacgacag tgccgggaat cgtctggcct tcgccatgct ggtctgcacg
     2821 gccgaccggc tggtggccgg tgccgagatc gaccgggtgg tggtgttatt ggaaggtgag
     2881 accgggctgg aagcgatcaa cgtgccggta agcgacggcg aacctcccga ggaaggtgca
     2941 ccggtgagct gtgccaacta cctgtcgttg ctgcccggcc agccggaggg ttgacacgac
     3001 cacagaggta gctcaggaac ccaagcgatc gagagcgcct cggaggtttc gggccgcctg
     3061 acccatgcgt tgctcgttct cgatgagagc gaaacgct
//
LOCUS       DASCMR010000422         2002 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002021516, whole genome shotgun sequence.
ACCESSION   DASCMR010000422 DASCMR010000000
VERSION     DASCMR010000422.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2002)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2002)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2002
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002021516"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(150..950)
                     /locus_tag="QGG16_09585"
     CDS             complement(150..950)
                     /locus_tag="QGG16_09585"
                     /inference="COORDINATES: protein motif:HMM:NF013245.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP25565.1"
                     /translation="MSAVTVDHSTDLRFAGMVASAICGRGMRRIMARPTLIMPVLLMP
                     LIFVVSFTGAFGSLTRVEGYGTDNVFNWMAVYAAMQGAVFAGVGGASTTAEDIENGFF
                     DRLLLTPGSRVPILVGTMAYSALRSTIPTTGVLLVSALGGLRLPGGPLALVTVYVATA
                     GMASAFCLLGLAVVYRFRTMRSMILIQVCGFSLMFLSTGQVPIHFMNGWLHTVARVNP
                     VTNVLRFARQGFLGDLTWSTTWPGLIALGVMVAVAGSLAAHQLRRLAA"
     gene            complement(947..1747)
                     /locus_tag="QGG16_09590"
     CDS             complement(947..1747)
                     /locus_tag="QGG16_09590"
                     /inference="COORDINATES: protein motif:HMM:NF013245.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP25566.1"
                     /translation="MSGGAATGLRLAGAQTLALTRRSVVSEWRQLGNVVPGIVFPLLL
                     AAVYTQQFTRAILLPGFPAVDSFLDFVLPASLVQSVSFGATEAGTELARDIENGFFDR
                     LRASPCTRLPLLLGRLGGAVVVAAVKGVLIIAIFLLFGAEIAGGPAAAVVLVAAAVLL
                     VIAIGGLGQMLAIFTGSQEAVNATFPLVFTSIFMSSAFFPTNLMSGWFREVAEANPVT
                     WIIDPVRRLILEGWSWADVGQALVVPLVISVATVTMAVVALNRKLGSS"
     gene            complement(1758..>2002)
                     /locus_tag="QGG16_09595"
     CDS             complement(1758..>2002)
                     /locus_tag="QGG16_09595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="daunorubicin ABC transporter ATP-binding
                     protein"
                     /protein_id="HJP25567.1"
                     /translation="DVDPVFLESARSVLIGFGPERPAFEGRCAIGLDGGAARVAEVVR
                     ALDDAGVTVSHLELDLPSLDDVFADATGRRLEGAEK"
BASE COUNT          461 a          629 c          605 g          307 t
ORIGIN      
        1 cgaatccaac accagggcgt ttaggcagtt tcgagaaggc attgctcttg gggctgcctt
       61 ctcgagtttc ggtgccctat ggcctctaga gggatcgtgt cgccgtgggc agggggttga
      121 ccgtcgtcga ctagccaatc atccggtggt cacgctgcca gtcgacgcaa ctggtgggca
      181 gcgagagacc cggcgacagc caccatgaca ccaagagcta tgaggcctgg ccacgtcgtc
      241 gaccaggtga ggtcacccag gaacccttgg cgggcaaacc gcagcacgtt ggtgactgga
      301 ttcactctgg cgacggtgtg tagccagccg ttcatgaagt gaatcggcac ctggccggtg
      361 gacaagaaca tcaagctgaa cccgcagacc tggatcagga tcatggagcg cattgtgcga
      421 aaccgataga cgactgccag gccgagaagg cagaacgctg aggccatacc cgccgtagcc
      481 acgtaaacag tcaccagggc aagcggtccg ccgggcaacc tgagtccacc aagagccgaa
      541 actagtaaca cgcctgtagt cggaatcgtc gacctcagcg cgctgtaggc catcgtccca
      601 accaagatcg gtactcggct gccaggagtc agcaacagcc gatcaaagaa gccgttctca
      661 atgtcctcag cggtagtcga tgcaccaccc acccctgcaa acaccgcccc ctgcatggcg
      721 gcgtataccg ccatccaatt gaaaacattg tcggtcccat aaccctcgac ccgagtgagc
      781 gatccgaatg cgcctgtgaa gctgacaacg aagatcagcg gcatcagcag caccggcatg
      841 atcaaggttg gccgcgccat gatgcggcgc atcccccgac cgcagattgc agaggccacc
      901 atgccggcga atctcaggtc cgtggagtga tcgaccgtga cggcgctcac gaggaaccga
      961 gcttccgatt cagggcgacc actgccatcg tcaccgtggc aacagaaatc accaatggaa
     1021 cgacaagtgc ctgaccaacg tctgcccacg accagccctc gagtatgagg cgcctgaccg
     1081 ggtcgataat ccaagtcacg gggtttgctt cggccacctc gcggaaccag ccgctcatca
     1141 ggttggtcgg gaaaaacgcc gagctcatga agatgctcgt gaataccagc ggaaacgtgg
     1201 cgttgacggc ctcctggctg cccgtgaaga tcgccagcat ctggcccagc cccccaatgg
     1261 cgatgacgag gaggaccgct gcggccacca gcacgacagc agcagccgga ccaccggcga
     1321 tctcggcgcc aaacaacagg aatatggcga tgatgagaac ccccttgacg gcggctacta
     1381 ctacggcccc gccgagtcgc cccaacaaca acggaaggcg cgtgcagggc gaggcccgta
     1441 gccgatcaaa gaaaccgttt tcgatgtcac gggctagttc cgttccggcc tcggtcgcac
     1501 cgaacgacac tgattgaacg aggctggccg gcagtacgaa gtcgagaaac gagtcgacgg
     1561 cagggaagcc gggtaacagg atggcgcggg tgaactgttg cgtgtagacg gcggccagca
     1621 gcagcggaaa cacgatccct ggaaccacgt tgccgagctg gcgccattcc gagacaacgg
     1681 atcggcgggt aagggccaga gtttgggctc cggcgaggcg aagccctgtt gccgcacctc
     1741 cgctcacagt tgaagattca cttttcggcc ccctcgaggc gacggccggt cgcgtcggcg
     1801 aacacgtcat caagactggg caggtcaagt tctaggtgtg aaacggttac tccggcgtca
     1861 tctagggccc gaaccacctc ggccacccgt gcagcacctc cgtcgagacc aatggcgcag
     1921 cgaccctcga aagccggacg ctcgggtcca aagccgataa gaacgctccg agccgactcg
     1981 aggaagacag ggtcgacgtc ca
//
LOCUS       DASCMR010000423         1661 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002025485, whole genome shotgun sequence.
ACCESSION   DASCMR010000423 DASCMR010000000
VERSION     DASCMR010000423.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1661)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1661)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1661
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002025485"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1078)
                     /locus_tag="QGG16_09600"
     CDS             complement(<1..1078)
                     /locus_tag="QGG16_09600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25568.1"
                     /translation="MTEMTETPIPEGSPGGPGEAPDSGPDETASPVAALIRRVPLTRW
                     VDLLIVLGGVWFVLWVVNPDGVLFTRSTPTGGDLGAHVWGPAFLRDELLPRFRLTGWT
                     PDWYAGFPAYHFYMVVPMLLVVAVDVGLATPLLAVVLPVLLAAGVVVHRHRLPGWPVR
                     LGLLAALVVLVVPVHYGMAVKWVTVAGLVVMPVAGWAAGRLAGLPFPGPALTSVATLP
                     FLFDQSFNIMGGNLMSTMAGEFAYALAMAACLVYLGLLVRGMETGRGRAPAAAVLALT
                     GLCHLLVAFFALVASLVAFALRPSRQALRWLVTTGLVSGLCAAFWVLPFWWRRDHLND
                     MAWHKLTRFRSYLWDRGDLAADFLS"
     gene            complement(1075..>1661)
                     /locus_tag="QGG16_09605"
     CDS             complement(1075..>1661)
                     /locus_tag="QGG16_09605"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HJP25569.1"
                     /translation="AKDPSLAVGALIQGALYVGLVGVPAWLVMVRGVRWADFGWAGPG
                     RGGHWRDAWHGLIIGVVAQVAVVPAIYLPILLLTDDLDISGPARELVDRADGLGIVLL
                     VLMVVVLAPVAEELFFRGMALRALEARMARRIALVVSASFFGLTHFQLLQLPALIMIG
                     LVCGWLAQRDGRLGRAVWAHVGFNATTIVILLAG"
BASE COUNT          332 a          595 c          551 g          183 t
ORIGIN      
        1 tgctcaggaa gtcggcagcc aggtcacccc ggtcccagag gtaggaccgg aagcgggtga
       61 gtttgtgcca cgccatgtcg ttgaggtggt cccgacgcca ccagaacggc agaacccaga
      121 acgccgcgca gagcccggac accagaccgg tggtcaccaa ccaccgcagg gcctgtcgac
      181 tgggacgcag agcaaaggca accagcgacg ccaccagggc gaagaacgcc accagcagat
      241 ggcacagtcc ggtcaacgca agtacggcgg ctgccggagc gcggccccga ccggtctcca
      301 tgccccgaac taggaggccc aggtacacga ggcaggccgc catggcgagg gcgtaggcga
      361 attcgcccgc catggtcgac atcaggtttc cgcccatgat gttgaacgac tggtcgaaca
      421 ggaacgggag ggtggctacc gacgtgagcg cgggacccgg gaacgggagc ccggccagtc
      481 gaccggccgc ccatccggcc accggcatga ccaccaggcc ggccacggtg acccacttga
      541 cggccatgcc gtagtggacc ggcacgacga ggaccaccag cgcggccagc aggcccagcc
      601 gcaccggcca gcccggcagg cggtgtcggt gcaccaccac cccggcggcc agcaggacgg
      661 gcagcaccac ggccagcaac ggggtggcca accccacgtc gacggccacc accagcagca
      721 tgggaaccac catgtagaag tggtaggcgg ggaatccggc gtaccagtca ggtgtccatc
      781 cggtcaggcg aaaccggggc agcaactcgt cgcggaggaa tgccggcccc cacacgtggg
      841 cgccgaggtc gccgccggtg ggggtagagc gggtgaacag tacgccgtcc ggattcacca
      901 cccagagcac gaaccagacg cctccgagga cgatgaggag gtccacccag cgggtcagcg
      961 gtacccgtcg gatcagggcc gccacggggc tggccgtctc gtcgggcccg ctgtccgggg
     1021 cctctcccgg tcctccgggc gatccttccg ggattggcgt ctcggtcatc tcggtcatcc
     1081 ggccaacagg atcacgatcg tggtggcgtt gaagcccacg tgggcccata cggcccggcc
     1141 cagccgcccg tcgcgttggg ccaaccatcc gcacaccaac ccgatcatga tcagcgccgg
     1201 aagctgcagg agttggaagt gggtcagtcc gaagaaggaa gccgagacga ccagtgcaat
     1261 ccgtcgggcc atccgtgcct ccaacgcccg aagcgccatc ccgcggaaga aaagttcctc
     1321 ggccacgggg gccagcacca ccaccatcag gaccagcagg acaatgccga gcccgtcggc
     1381 ccggtcgacc aactcgcggg ccggccccga gatatccagg tcgtcggtca gcaaaaggat
     1441 cgggaggtag atggccggga cgactgccac ctgagccacc acgccgatga tcaggccatg
     1501 ccaggcgtct cgccagtgtc cgccccggcc tggcccggcc cagccgaagt cggcccacct
     1561 gaccccgcgg accatcacca gccacgccgg gaccccgacc aaccccacgt acagggcacc
     1621 ctggatgagc gctcccacgg ccagactggg atccttggcc g
//
LOCUS       DASCMR010000424         8553 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002029181, whole genome shotgun sequence.
ACCESSION   DASCMR010000424 DASCMR010000000
VERSION     DASCMR010000424.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 8553)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8553)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8553
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002029181"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1318
                     /locus_tag="QGG16_09610"
     CDS             <1..1318
                     /locus_tag="QGG16_09610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25570.1"
                     /translation="HARCVRIVDAVPDELVLVRADSAGAIDPVLTEAARRARVPEPTV
                     LDEMRAVAALAAHGPRGVSSDLAPVLGGVFWKRSGDAPTGPKPIVTRADLGGDSRPDR
                     PPSAPSVVAVGPRTVFEEDGGPAGRRRGVSLPLVSAVVVVALVVLGVILVLQPDEQPI
                     APPLATATTTVPASATPQSTVAPTTVPSETVPPTVASTVEPLATVPPTTLGDASDGDT
                     SASATTLPAETDADPDSDGRPEADQGAGIEADDETGSSESPTTTEAPRLGTVTLSGVG
                     LTVDATTDYEVLVGFGDDAGTALTLVSGALGEAIGDSGWGADETCAAAEVRRLGWGGL
                     EIVLARGSVDDPGRLVQWYLNGPDSTQTSWWTLERIGIGSTVADLRAAHGAGMSLEQP
                     SERDPAGWFNTEPNLGDGVLGAVGNTTDSGRVLLMWAGDGCQRRFS"
     gene            complement(1320..2243)
                     /locus_tag="QGG16_09615"
     CDS             complement(1320..2243)
                     /locus_tag="QGG16_09615"
                     /inference="COORDINATES: protein motif:HMM:NF024109.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HJP25571.1"
                     /translation="MTSVFAGDPTVAAPPWRRIELPELGPIEVRDSGPLRGSGNGSAD
                     GPTILLLHGWTASTDLNWCRTYEPLVRWRNGQIRIVTWDHRAHGARGLRTGTTTRIDD
                     MADDTAAIAGALGIERAIVVGYSMGGAVAQATWRRHPDLVAGLVLGATAARFGVGDRQ
                     RQDFALMDRGIGPARLLESVGCGALAWRVARWFSERHVGRTATEDASFDDWAWRETRA
                     GVLSRVLTAGNDLGGFDATEWLCKVDVPHAVLVCNDDDIVPTVRQRELVDALPAPFVH
                     EMATGHTACVLRPDLFVPALTAALDEVTAVR"
     gene            complement(2240..2713)
                     /gene="greA"
                     /locus_tag="QGG16_09620"
     CDS             complement(2240..2713)
                     /gene="greA"
                     /locus_tag="QGG16_09620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0006354 - DNA-templated transcription
                     elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HJP25572.1"
                     /translation="MADAHQLSQETYDRLAAEFEDLTTRGRIDIARKIETARELGDLS
                     ENGDYHAAKEEQGKMEGRILHLESILEKAEIVELSTGSVDVVAPGTIVAVVYEGDDEP
                     ERMLVGSIEEQRDDVLVVSPGSPLGAALLGSAVGDTVSFEAPGGMLAVKVVAIER"
     gene            2967..3947
                     /locus_tag="QGG16_09625"
     CDS             2967..3947
                     /locus_tag="QGG16_09625"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003862 - 3-isopropylmalate dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HJP25573.1"
                     /translation="MAHRIGIIGGDGIGPEVIAEGLKVIEAAGVALDTVDYDLGGARY
                     GRDGTVLPDEILDEWRQLDALYLGAVGTPEVPPGLIERGLLLKMRFSLDLYVNLRPFV
                     LSAKGIDFRVVRENTEGTYAGEGGFLRQGTPYEIATQGSVNTRHGVERAVRFAFDLAM
                     TRRRHLTLVHKTNVLTFSGDLWERTFNEVAEEYPDVETAYNHVDAACIYFVQSPQQYD
                     VIVTDNLFGDILTDLGGAVSGGIGLASSANLNPDRTSPSMFEPVHGSAPDIAGKGIAN
                     PKAAILSGAMMLDFLGESDAAARVEAACADPSTDVEGTVAIGDAIAGLLA"
     gene            3995..4915
                     /locus_tag="QGG16_09630"
     CDS             3995..4915
                     /locus_tag="QGG16_09630"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transaminase"
                     /protein_id="HJP25574.1"
                     /translation="MPIEKSSKIWMNGELVDWDDATVHVLTHTLHYGNGVFEGIRAYE
                     TDRGPAVFRLREHIERLFRSAKILFLEIPYTVDELVEATLETVRVNGHQSCYIRPLVY
                     LGYGEMGLNPLPCTVDVSIATWPWGTYLGDDGLANGVDMMISSWQRHDPNAMPPAAKG
                     VGHYINSQMAKIQAVKAGYDEAILLSPQGYVSECTGENLFVVRDGGIVTPPSSAGALE
                     GITQSAVRRIAEDLGIPYTTGNILRSDLYTADEAFLSGTAAEVVPIRSVDDRVIGAPG
                     PMTSRIQEVFFQAVRGERPEYSEWNEHVGA"
     gene            4902..6521
                     /gene="cimA"
                     /locus_tag="QGG16_09635"
     CDS             4902..6521
                     /gene="cimA"
                     /locus_tag="QGG16_09635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043714 - (R)-citramalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citramalate synthase"
                     /protein_id="HJP25575.1"
                     /translation="MSAPDMPTLPKAVEIYDTTLRDGAQLEGISLTVDDKLRIAEQLD
                     RLGVHYIEGGWPGANPKDVEFFERARTELDLQRSTLVAFGSTRRVGGKTDGDATLINL
                     LEAGTEVVCIVGKASAYHVTEALRTDLDEGVAMVADSVRHLKSHGRTVFFDAEHFFDG
                     YADDPEFSMRVLLGAAEAGADCLVLCDTNGGSLPGRIESMVRDVVAAVDCAVGVHLHN
                     DTGCGVANALAGVAGGATHVQGTINGYGERVGNCDLVPIIANLTLKMGVETVSADRLA
                     ELTPVAHHVAELVNFAADPQQPYVGATAFAHKAGLHTSAIARRRDAYEHVDPELVGNG
                     TRFLVSEMSGRSTIELKATQLGIELDGDTLGEIVETLKELEYAGYHFEAADASLELLM
                     RAAAGWSHGFFELESFSVDVGHRSGSGSRAWNEVAVEVETEATVKVHVEGERMVATGE
                     GNGPVNALDAALRSALADRHPQLDRLHLTDFKVRVLETREGTAAVTRVLIDTTNGERT
                     WTTIGVSENIIEASWQALVDSLVYGLFHTSA"
     gene            6543..7202
                     /locus_tag="QGG16_09640"
     CDS             6543..7202
                     /locus_tag="QGG16_09640"
                     /inference="COORDINATES: protein motif:HMM:NF012455.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015267 - channel activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin"
                     /protein_id="HJP25576.1"
                     /translation="MTSRSRVLLAECLGTTLLLIGVVGSGIMAARLSPDDVGLQLFQN
                     AVATAAVLVAIIATFGTISADFNPAVTIGAWLLGHRAGRDVAPLIVVQVIGAVAGTVL
                     ANLMFDLEAATWSTTSRSGGHLWLSEVVATVGLLLAVFALVRAGRTAHLPYVVGAYIG
                     GAYYFTSSTSFANPAVTVGRTLSDTFTGIDPSCAPMFVLMQLVGVGVAVVLLRALFPV
                     D"
     gene            complement(7223..8398)
                     /locus_tag="QGG16_09645"
     CDS             complement(7223..8398)
                     /locus_tag="QGG16_09645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HJP25577.1"
                     /translation="MPAMPAVEIEIRSRIDQLLEIDPCNRLGFLGAQYDLGLAWVHFP
                     EGSGGLDADRNLQGLVHDSVVAAAGPQPRYDIGYGMAAPTIVTCGTPEQHRRWLRPLF
                     TGEEIWCQLFSEPGAGSDVAGLSTRAVADGDEWVVNGQKVWTSNAHLARWGLLVTRTD
                     PDAPKHRGLTYFAIDLNQSGVEIRPLRQLTGQAEFNEIYLTDARVAEADRLGDVGDGW
                     RVTLTTLMNERVAIGGETRSSDKGTIDWVFEAWRDYGHDDPARRDDLMRLWVRSETLR
                     LNNMRAEQSRETGTPGPEGSIGKVLSAELNKDAFAFALGLSGMAGTLFDAGYEQDQTR
                     PALDYDSLGEYFLRVRANSIEGGTTEVMRNILGERVLGLPGDVRVDKDVPWIEVPRS"
BASE COUNT         1412 a         2828 c         2828 g         1485 t
ORIGIN      
        1 ccacgcccgg tgcgttcgca ttgtcgatgc cgtgcccgac gaactggtgc tggtgcgggc
       61 agacagcgcc ggtgccattg atccggtcct gaccgaggcg gctcgacggg cccgggttcc
      121 cgagccgacc gtgctcgacg agatgcgagc cgtagcggcg ttggccgccc atgggccacg
      181 gggtgtgagt agtgacctgg caccggtgct tggtggagtt ttttggaagc ggagcggtga
      241 tgctccgacc gggcccaagc cgatcgtgac ccgcgctgac cttgggggcg attccaggcc
      301 ggaccggccc ccctcggcgc cgtcggtggt ggccgtcggc ccgcgcaccg tttttgagga
      361 agacggtgga ccggccgggc gtcgtcgtgg ggtctcgctc ccgctggtct cggctgtcgt
      421 tgtggtggct cttgtggtgc tcggagtgat tctcgtgctg cagccagacg agcagcccat
      481 tgccccgccg ctcgcgacgg cgaccaccac ggtccctgct tcggctactc cacagtcgac
      541 tgtcgcaccc acaaccgtgc cgtcggaaac ggttcctccg accgttgcgt ccaccgtcga
      601 accgttggcg acggttcccc cgaccaccct cggggatgcc tccgatggag acacatccgc
      661 ctcggcgacg accttgccgg ctgagacgga cgcggacccc gactctgacg gtcgcccaga
      721 agccgatcag ggagccggaa tcgaagctga cgacgagacc ggcagttccg aatcgccgac
      781 gacgaccgag gccccccgtc ttggcacggt gacgttgtcc ggcgtcggac tgacagtgga
      841 cgccacgacc gattacgaag tgctggtcgg ctttggagac gacgccggga cggcgctcac
      901 cctggtgtcg ggcgcactgg gtgaagcgat cggggacagt ggctggggtg ccgacgaaac
      961 ttgcgccgcg gccgaagtcc gtcgactggg ttggggcggc cttgagattg tcctggcccg
     1021 cggctcggtc gacgacccgg gaaggttggt ccagtggtac ctcaacggtc ccgactccac
     1081 ccagacgtcg tggtggaccc tggagcgcat cggcatcggc tccacggtgg cggatctgcg
     1141 ggccgcccac ggagccggca tgtccctcga acaaccatct gagcgtgatc cggctggctg
     1201 gttcaacacc gaacccaacc tgggcgacgg agttctcggt gcggtgggca acaccaccga
     1261 ctcgggacgg gtgctgctga tgtgggcggg agacggctgc caacgccggt tctcctgact
     1321 tagcggactg ccgtgacctc gtcgagggcg gcggtcagag cagggacgaa taggtcgggt
     1381 cgcaacacgc aggccgtgtg accggtggcc atctcgtgga cgaagggtgc cgggagagcg
     1441 tcgaccaact cacgctggcg aaccgtcggc acgatgtcat cgtcgttgca gaccagaacg
     1501 gcgtggggca cgtcaacctt gcagagccac tcggtggcgt cgaacccgcc gaggtcgttt
     1561 ccggcggtca gcacccggga caacacgccg gcccgggtct ctctccatgc ccagtcatca
     1621 aatgaggcgt cttcggtcgc agtgcgaccg acgtgacgtt cgctgaacca gcgggcgacc
     1681 cgccacgcca gagcaccaca gcccacggac tccaacagtc gcgccggacc gatgccccgg
     1741 tccatcaggg cgaagtcctg tcgctgtcgg tcgccgacgc cgaatctcgc cgcggtggcg
     1801 cccaggacga gaccagccac caggtcgggg tggcgtcgcc aggtggcctg ggcaacggct
     1861 ccgcccatcg agtagccgac gactatcgct cgctcgatcc ccaacgcacc agcgatggcg
     1921 gccgtgtcgt cagccatgtc atcgatccgt gtagtggtgc cggtgcgaag tccccgggct
     1981 ccgtgggccc ggtggtccca cgtgacgatc cggatctgcc cgttccgcca tcggacaaga
     2041 ggctcgtagg tgcgacacca gttgaggtcg gtgctggccg tccagccgtg gagcaacagg
     2101 atggtcggcc cgtcggcaga accattgccg gagccgcgga ggggtcccga gtcgcgtacc
     2161 tcgatggggc cgagttcggg aagttcgata cgccgccacg gtggtgcggc gaccgtcgga
     2221 tcaccagcga atacgctggt catcgctcga tggcgacgac cttgacggcc aacatgccgc
     2281 ccggtgcctc gaacgagacg gtgtcgccca ccgctgagcc cagcagggca gcacccagcg
     2341 gagaccccgg tgagacaacg agcacgtcgt cgcgctgctc ctcgatcgat ccgacgagca
     2401 ttcgctcggg ctcgtcgtca ccctcgtaga cgacggccac gatggtgccc ggggccacca
     2461 cgtcgacgct gccagtcgaa agttcgacga tctcggcctt ctcgaggatg ctctcgagat
     2521 ggagaatccg gccctccatc tttccctgct cctccttggc ggcgtggtag tcgccgttct
     2581 cagagaggtc gccgagctcg cgggccgttt cgatcttgcg ggcgatgtca atccgcccgc
     2641 gtgtggtgag gtcctcgaac tcggcggcga gccggtcgta ggtctcctgg gaaagctggt
     2701 gcgcatcggc catcccacga gggtagccac ggggacgcga acactagtgg cgatctctag
     2761 gacggctttc tccggcgata cccgtttgac ctgctgcgac accggagcgg tacacttgtg
     2821 gccgtgaacg atcgaccccg ggtaatcatc attcgttagc gcacaccgct ctggtgtgcg
     2881 ccctgaccgt ccaccttggt gggcggtttt ttagttccct gcccgcttcc cgatacatcc
     2941 caagaattcc gtaggagttg gagaccatgg cgcaccgcat cggcatcatc ggtggcgacg
     3001 gcatcggccc cgaggtcatc gccgagggcc tgaaggtgat cgaggccgcc ggcgtggccc
     3061 tcgacaccgt tgactacgac ctcggtggtg cccgctacgg ccgtgacggc accgtgcttc
     3121 ctgacgagat cctcgacgag tggcgtcagc tcgacgccct gtacctcgga gcggtgggta
     3181 ctcccgaggt gccgccgggc ctcatcgagc ggggccttct gctcaagatg cggttctccc
     3241 tcgacctgta cgtcaacctc cgtccgttcg tgctctcagc caaggggatc gacttccgcg
     3301 tggtgcgtga gaacaccgaa gggacctacg ccggtgaggg gggcttcctt cgtcagggca
     3361 caccatacga gatcgccacc cagggctcgg tcaacacccg acacggcgtc gagcgggcgg
     3421 tccgcttcgc gttcgacctg gccatgaccc ggcgccgaca cctcacgctg gtccacaaga
     3481 ccaacgtcct cacgttctcc ggcgacctgt gggagcgaac cttcaacgag gtggccgagg
     3541 aataccccga cgtcgagacg gcctacaacc acgtcgacgc ggcctgcatc tacttcgtgc
     3601 agtcgcccca gcagtacgac gtgatcgtca ctgacaacct gttcggcgac attctcacgg
     3661 accttggcgg tgccgtctcg ggcggcatcg ggctggcttc gtcggccaat ctgaatcccg
     3721 atcgcacatc cccgtcaatg tttgaaccgg tccacggttc ggcccctgac attgccggaa
     3781 agggcatcgc caacccgaag gcggccatcc tgtcgggggc catgatgctg gactttcttg
     3841 gcgagtccga cgcggcggcc cgtgtcgagg cggcgtgtgc cgatccgtcc accgacgtcg
     3901 agggcaccgt ggccatcggt gacgccatcg ccggactgct ggcttgaatt agctggcctg
     3961 accgccactt accgaaccga gaagaggaac cgacatgccg atcgagaagt cgtccaagat
     4021 ctggatgaac ggtgagctcg tcgactggga cgatgccacg gtccacgtac tcacccacac
     4081 cctgcactac ggcaacggtg tgttcgaggg catccgggcg tatgagaccg acaggggtcc
     4141 agcggtgttc cgcctccgcg agcacatcga gcgacttttc cggtccgcca agatcctctt
     4201 cctggagatc ccgtacaccg tcgatgaact ggtcgaggca acgctggaga ctgtccgggt
     4261 caatggccat cagtcgtgct acatccggcc gctcgtgtac ctcggctatg gcgagatggg
     4321 cctcaacccg ctgccatgca cggtcgacgt ctcgatcgcc acctggccgt ggggcaccta
     4381 cctgggcgac gacggcctgg ccaacggcgt agacatgatg atctcgtcgt ggcagcgcca
     4441 cgacccgaac gcaatgccgc cggcagccaa gggcgtcggc cactacatca actcccagat
     4501 ggccaagatt caggcggtca aggccggcta cgacgaggcc atcctgttat ccccgcaggg
     4561 atacgtgtcc gaatgcaccg gtgagaacct gttcgttgtt cgcgacgggg gaatcgtgac
     4621 gcccccgtca agtgccgggg cactcgaggg catcacccag agcgcggtgc gtcgtattgc
     4681 cgaggatctg gggatcccgt acaccacggg gaacattctg cgcagcgacc tctacaccgc
     4741 ggatgaggcg ttcctgtcgg gcacggctgc cgaggttgtg cctatccgtt cggtcgacga
     4801 tcgggtcatc ggagcgccgg gtccgatgac cagccgcatt caggaagtct tcttccaggc
     4861 agtccgcggg gagcgtcccg aatactcgga atggaacgag catgtcggcg cctgacatgc
     4921 ccacgctgcc caaagcagtc gagatatatg acaccacgct gcgagacggc gctcaactcg
     4981 agggcatatc gctgaccgtc gacgacaagc ttcgcatcgc cgagcagttg gaccggctcg
     5041 gcgtgcacta catcgagggc ggctggccgg gcgccaaccc caaggacgtc gagttcttcg
     5101 agcgcgcccg caccgaactg gacctccagc gctcgacgct ggtggccttc ggttccacgc
     5161 gtcgggtcgg gggtaagacc gacggtgacg ccacgttgat caacctgctc gaagccggca
     5221 ctgaggtcgt gtgcattgtc ggcaaggcat cggcgtacca cgtgactgag gccctgcgaa
     5281 ccgatctgga cgagggcgtg gccatggtcg ctgactcggt ccgccacctg aagtcccacg
     5341 ggcggacggt gtttttcgat gccgagcact tcttcgacgg ctacgccgac gacccggagt
     5401 tctcgatgcg ggtcctgctt ggggccgctg aggccggtgc cgactgcctc gtgctgtgtg
     5461 acaccaacgg cggttcgtta cccggacgga tcgagtccat ggttcgcgac gtggtggccg
     5521 ccgttgactg cgcggtcggc gtgcacctcc acaacgacac cgggtgtggc gtggccaacg
     5581 ccctggctgg tgtggcgggc ggtgccaccc acgtccaggg caccatcaac ggctatggcg
     5641 aacgggtcgg caactgcgac ctggttccga tcattgccaa cctgacactc aagatgggcg
     5701 tcgagaccgt cagcgccgac cggctcgccg aactcacccc ggtggcccac cacgtggctg
     5761 aactggtgaa cttcgccgcc gacccccagc agccctacgt gggtgccacc gcgttcgccc
     5821 acaaggcggg actccacacc agcgccattg cccggcgccg cgacgcctac gagcatgtgg
     5881 atcccgaact ggtcggcaac ggcacccggt ttctcgtctc ggagatgtct gggaggtcca
     5941 ccattgaact gaaggcgacc cagctgggca tcgagctcga cggtgacacg ctgggcgaga
     6001 tcgtcgagac cctcaaggag ttggagtacg ccggctacca ctttgaggcc gccgacgcct
     6061 ccctcgaatt gctcatgcgg gctgcagccg gttggtccca cggcttcttc gagttggagt
     6121 cgttctcggt cgacgtcgga catcggtcgg ggagtggaag ccgggcatgg aacgaggtgg
     6181 ctgtcgaggt cgagaccgag gccaccgtca aggtccatgt cgaaggcgaa cgcatggtgg
     6241 ccaccggaga gggcaacggt ccggtcaacg ccctagatgc cgcactccga tcagcgctag
     6301 ccgatcgcca tccgcagttg gaccgcctgc acctgaccga tttcaaggtc cgggtactgg
     6361 agacccgtga gggcaccgcg gcagtcaccc gggtgctcat cgacaccacc aacggtgaac
     6421 gcacctggac gaccatcggg gtgtcggaga acatcatcga ggcgtcctgg caggccctcg
     6481 tcgactcgtt ggtctacggc ctgtttcaca cgtcagcctg agaccgggct gaggctgacg
     6541 tggtgacatc gcgttcgagg gtcctgctgg ccgaatgcct gggaaccacg ttgctgctca
     6601 tcggggtggt cggctcgggg atcatggccg cccgcctcag cccggacgac gtgggcctcc
     6661 agttgttcca gaacgcagtc gccacagcag cagtgctggt ggccatcatc gccaccttcg
     6721 gcacgatctc ggcggacttc aatcctgcgg taaccatcgg cgcctggctg ctgggccacc
     6781 gggcggggcg ggacgtcgcc ccgctgatcg tggtgcaggt catcggtgcg gtggccggca
     6841 cggtgctggc caacctcatg ttcgaccttg aagctgccac gtggtcgacc acgtcacgtt
     6901 cgggtggcca cctatggctg tccgaggtgg tagccactgt gggcctgcta ctggcggtgt
     6961 tcgctctcgt ccgcgcgggc cggaccgctc acctgccata cgtggtaggt gcctacatcg
     7021 gcggggccta ctacttcacc tcgtcgacca gtttcgcaaa cccggcggtc actgtgggac
     7081 gcaccctgag cgatacgttc accgggatcg acccttcgtg cgcgccgatg tttgtgctga
     7141 tgcaactggt cggtgtgggc gtagccgtcg ttctcttacg ggcgctcttc ccggtcgact
     7201 gagcgtcagg tgcccgctct tctcagctac ggggcacctc gatccacgga acgtccttgt
     7261 cgacgcggac gtcaccgggg agtccgagga cccgctcccc caggatgttt ctcatgacct
     7321 cggtggtgcc accctcgatg gagttggctc gcacccggag gaagtactcg cccagcgagt
     7381 cgtagtccag cgccgggcgg gtctggtcct gctcgtagcc cgcatcaaac agggtgccgg
     7441 ccattcctga gaggcccagg gcgaaggcga aggcgtcctt attgagttcg gcggacaaga
     7501 ccttgccgat cgatccctcg gggcccggcg taccggtttc ccgggactgt tcggcccgca
     7561 tgttgttgag gcgcagcgtt tcgcttcgca cccagaggcg catcaggtcg tcccggcgtg
     7621 cgggatcgtc gtgcccatag tcccgccagg cctcgaatac ccagtcgatg gtgcccttgt
     7681 ccgacgaacg ggtctcgccg ccgatggcca cccgctcgtt catgagcgtg gtcagggtga
     7741 cccgccaccc gtcgcccacg tcacccaacc ggtcggcctc agcaacccgg gcgtcggtca
     7801 ggtagatctc gttgaactcg gcctgccccg ttaactggcg gagcggtcgg atctccacac
     7861 cggactggtt caggtcgatg gcgaagtagg tgagtccccg atgtttgggc gcgtcgggat
     7921 cggtgcgagt aaccagaagg ccccaccgag ccagatgggc gttgctggtc cacaccttct
     7981 gaccgttgac cacccattcg tcgccgtcgg ccaccgctcg ggtcgacagg ccggccacgt
     8041 cggatccggc gcccggctca gagaacaact ggcaccagat ctcctcaccg gtgaacaacg
     8101 gtcgcagcca gcgccggtgc tgctcgggag ttccacaggt cacgatggtc ggcgcggcca
     8161 tgccgtaacc gatgtcgtac cggggttgcg gtccagcagc ggccaccacg gaatcatgga
     8221 cgagtccctg cagattccga tcggcatcga ggccaccact gccctccggg aagtgaaccc
     8281 aggccaggcc taggtcgtac tgggcaccca ggaaccccag gcggttgcag gggtcgatct
     8341 ctagtaactg gtcgatgcgg gagcggatct cgatctcgac ggcgggcatg gcaggcatcg
     8401 cgggatccta ggacccgtct gggccggaag cggaatcgga accgtccaca atgcgggccg
     8461 ccggtagcgt gcggcgatga tcaggcggga acagaccgac ggagaggcgg cggctgaggg
     8521 cgcccaactg ggggccattg actggctcct cct
//
LOCUS       DASCMR010000425         2300 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002031138, whole genome shotgun sequence.
ACCESSION   DASCMR010000425 DASCMR010000000
VERSION     DASCMR010000425.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2300)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2300)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2300
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002031138"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..443)
                     /locus_tag="QGG16_09650"
     CDS             complement(<1..443)
                     /locus_tag="QGG16_09650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HJP25578.1"
                     /translation="MENLLDGWGITLATFSPLVGAAVMMLIPREREDQHKLIALVTSL
                     WVAFVGVLLLIQFDLDHTDRLQFGVDKVWIDVISSRFSVGIDGMSLPLILLTMLIVPL
                     CIIYSWNHFPDPVNPKAFLILILILETGMIGTFVAQDLVLFFVFF"
     gene            complement(456..>2300)
                     /locus_tag="QGG16_09655"
     CDS             complement(456..>2300)
                     /locus_tag="QGG16_09655"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR01974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HJP25579.1"
                     /translation="DGLAVMMLLVVTLVSLLVHVYSTDYVHGDRRYTHFFAFLSLFSA
                     SMLLLVVSENTLQLLCAWELVGVCSFALIGHWWEEKPNSDAALKAFLTNRVGDMGLLV
                     GVTVLFFAAGSALPDRFGSFSIAETNALANSGALSHTTLVVAASCLMAAVMSKSGQFF
                     LHTWLPDAMAGPTPVSALIHAATMVVAGVFMIARMYGVFFEGFQIGGSSINLMAFIGG
                     LTTIVGALLAFVQRDIKKVLAYSTISQLGYMVLALGVGARTAAVFHLFTHAFFKACLF
                     LGSGSVSHAVHSFDMKSDMGGLRKDMPHTYRTFMIGTVALAGLPPLAGFWSKDEILVG
                     TGGWGLMGGTGGNGAYTLMLGMGMLTAALTAAYMTRCVYLTFFGEFRGHGEPHESGPR
                     ITGPLWILAGLAVVAGFFNMPKGFQLAPGSLQERFGHFVEPVAGYFPAISHATPSWSL
                     AIVSTLVVIGGIAASGCYYFIKVEAASKAVGTSLTELPDGPTTKYPLARMGHTLLSNK
                     YYLDHFYNGVVADGTKGPLARMANRINQDVIDRTVDVVGETAIKAGTVVYEKIDQLVV
                     DGAVDASGRGASGAGEELRKINSGKVQSYAAILFAAATVLAGILIVLV"
BASE COUNT          479 a          706 c          757 g          358 t
ORIGIN      
        1 tcgaagaaca cgaagaagag caccaggtcc tgggccacga aggtgccgat catcccggtc
       61 tcgaggatca ggatcaggat caggaaggcc ttggggttga ccggatccgg gaagtggttc
      121 cagctgtaga tgatgcacag cggcacgatc agcatggtca acaggatcag cggtagcgac
      181 atgccgtcga tacccaccga gaaccggctg gagatcacgt cgatccagac cttgtcgacc
      241 ccgaactgga ggcggtcggt gtgatccagg tcgaactgga tcagcagcag gacgcccacg
      301 aacgccaccc acaacgaggt tacgagcgcg atcagcttgt gctggtcctc tcgctccctc
      361 gggatgagca tcatgaccgc cgcaccgaca agcggtgaaa acgtggcgag ggtgatgccc
      421 cagccgtcga gcaaattttc catgtcggcg tctccctaga cgaggacgat gagtattccg
      481 gccaggaccg ttgctgccgc gaacaggatc gccgcgtagc tctggacctt tccggagttg
      541 atcttgcgaa gctcttcacc tgcaccggat gcaccgcgtc cggatgcgtc aaccgcccca
      601 tcgaccacca actggtcgat cttttcgtag acgacggtcc cggcctttat ggcggtctcg
      661 ccgaccacgt ccacggtgcg gtcgatgacg tcctggttga tccgattggc cattcgggcc
      721 aacgggccct tggtgccatc ggccacgacg ccgttgtaga agtgatcgag gtagtacttg
      781 ttggacagca gggtgtggcc cattctggcc agcgggtact tggtggtcgg cccatcgggc
      841 agttcggtga ggctggtgcc gacggccttc gaggcggcct ccaccttgat gaagtagtaa
      901 cacccggatg cggcgatgcc gccgatgacg accagcgtcg agacaatggc cagcgaccag
      961 ctcggggtgg cgtggctgat ggccgggaag tagccggcta ccggttccac gaagtggccg
     1021 aagcgctcct ggagcgaccc gggagccaac tggaagccct tgggcatgtt gaagaagccg
     1081 gccacgacgg ccagcccggc caggatccac aacgggccgg taatgcgcgg gcccgactcg
     1141 tggggttcgc cgtgaccacg gaactcaccg aagaaggtga ggtagacgca gcgggtcatg
     1201 taggcagcgg tcagtgccgc ggtgagcatg cccatgccca gcatcagggt gtaggccccg
     1261 ttgcccccgg tgcctcccat caggccccaa ccaccggtcc caacgaggat ctcgtccttg
     1321 gaccagaagc cggccaacgg cggaaggccg gccagggcca cagtgccgat catgaacgtc
     1381 cgataggtgt gcggcatgtc cttgcggagg ccacccatgt cagacttcat gtcgaagctg
     1441 tgcacggcgt ggctgaccga accggaaccc aggaacaggc aggccttgaa gaaggcgtgg
     1501 gtgaacaggt ggaatacggc cgccgtccgg gcacccacgc ccagggccag gaccatgtaa
     1561 cccagctggg aaatcgtcga gtacgcgagc acctttttga tgtcgcgctg cacgaaggcc
     1621 aacagtgcac ccacgatggt ggtcaagcca ccgatgaagg ccatgaggtt gatcgaactg
     1681 cccccgatct ggaagccctc gaagaacacc ccgtacatgc gggcaatcat gaagacaccg
     1741 gccaccacca tggtcgccgc gtggatgagc gccgagacgg gcgtcgggcc ggccatggcg
     1801 tcgggcagcc acgtgtgcag gaagaactgt ccggacttgg acatcacggc agccatcagg
     1861 caactggcgg ccaccaccaa cgtggtgtgc gacagcgccc cgctgttggc cagcgcgttg
     1921 gtctcggcga tggagaacga tccgaagcgg tcaggcaggg ctgaaccggc ggcgaagaat
     1981 aggacggtca cgccgaccag gaggcccatg tcgcccaccc ggttggtcag gaaggccttg
     2041 agtgccgcat cgctgttggg cttctcctcc caccagtgac cgataagggc gaacgagcag
     2101 acgccgacta gctcccaggc gcacagcagc tgcagcgtgt tctccgacac gaccagcagg
     2161 agcatcgacg cgctgaacag ggacaggaag gcgaagaagt gggtgtagcg ccggtcgccg
     2221 tggacgtagt cggtggaata gacgtgaacc agcagcgaca ccagggtcac cacgagcagc
     2281 atcatcacgg ccagcccgtc
//
LOCUS       DASCMR010000426         2414 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002035660, whole genome shotgun sequence.
ACCESSION   DASCMR010000426 DASCMR010000000
VERSION     DASCMR010000426.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2414)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2414)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2414
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002035660"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1116
                     /locus_tag="QGG16_09660"
     CDS             <1..1116
                     /locus_tag="QGG16_09660"
                     /inference="COORDINATES: protein motif:HMM:NF012382.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HJP25580.1"
                     /translation="AFVAEHDLGPFPAMRNRLREVVDLGGFGYHATIDHMIEAFCGWS
                     TRRYGWTPDPALTVPNTSVIQGVWSCVEAFTEPTGAVILTPPIYFPFNTISESTGRRT
                     VDWRLIKDDNGWHYDLDGLAHLLADDPGIQMLLLCHPHNPTGRVLTTDQLTRIVELAS
                     EHDVVIVSDEIHADFTYPGATHVPLAAVPGAASCTVTVTSGIKTFAMGGLRASVASFA
                     DEDMLVRYRRIPEHLLGSPNRLGCEAAIVGWEEGDTWVDQLVALFDHHRHHLASRLAD
                     ELPDVRMHVPQSTFLAWLDLSALGPGDRPGRWLRDRTGVDCKDGPLFGPGGEGHARLT
                     FGTSTAMLDEIIDRLVSGIGTSPASSLETDIGNSAFH"
     gene            1233..>2414
                     /locus_tag="QGG16_09665"
     CDS             1233..>2414
                     /locus_tag="QGG16_09665"
                     /inference="COORDINATES: protein motif:HMM:NF012766.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HJP25581.1"
                     /translation="MKSAPTDDMVHVTRWHWGSKEWSPFSATEMDRRQNALRAHLAAE
                     GVDACLLTSFHNICYYSGWLYCYFGRKYGMVVDTEHATTISAGIDGGQPWRRTHGDNV
                     VYSDWRRDNYYQAVRDLTSGVRRLGVEFDHLSVDQFRALEAALPDVELVDVGEATMWM
                     RTVKSAEEHDLIRHGTRICDLGAAACVEAVAAGTSEHEVALAVTQAMVREIASSFDFV
                     ELMDTWTWFQSGNNTDGAHNPVTNKLVESGDILSLNTFPMIFGYYTALERTMFCDHVT
                     SDEHLRLWEVNVEVHERGLDLIQPGVRCCDIAAELNDIYRSHGLLKYRSFGYGHSFGV
                     LSHYYGREAGVELREDVETVLEPGMVVSMEPMIAIPPGQPGSGGYREHDILIVGTDGA
                     EN"
BASE COUNT          447 a          817 c          731 g          419 t
ORIGIN      
        1 gccttcgtgg ccgaacatga cctgggcccg ttcccagcga tgcggaaccg actgcgggag
       61 gtggtggacc tcggtgggtt cggctaccac gcgaccatcg accacatgat cgaggcgttc
      121 tgcggctggt cgacccgccg ctacggctgg acacccgatc cagcactaac agtccccaac
      181 acctcggtca tccagggcgt ctggtcgtgc gtagaagctt tcaccgagcc gaccggggcc
      241 gtcatcttga ccccacccat ttacttcccg ttcaacacca tcagcgagtc gaccggtcga
      301 cgcaccgtgg actggcgcct catcaaggac gacaatggat ggcactacga cctcgatggg
      361 ttggctcatc tactagccga cgatccgggc attcagatgc tgctgttatg ccaccctcac
      421 aatccaacag gtcgggtgct caccacggac cagctaaccc ggatcgtgga actggcctcc
      481 gagcacgacg tggtgatcgt gtccgacgag atccacgccg acttcaccta tccgggcgcc
      541 acccacgtgc cgctggccgc cgtgccgggg gctgcgtcct gcacggtcac cgtcacgtcg
      601 ggcatcaaga ccttcgccat gggtgggctc cgggcctcgg ttgcatcgtt cgcagatgag
      661 gacatgctgg tccgctaccg gaggatcccc gagcacctgc tgggcagccc caaccgcctg
      721 ggctgcgagg cggcgatcgt cggttgggaa gagggcgata cctgggtgga ccaactggtc
      781 gccctcttcg accaccaccg ccaccacctg gcgtcccggc tcgccgacga gttgcccgac
      841 gtccgcatgc acgttcccca gtcgaccttc ttggcctggc tggacctctc ggcgttagga
      901 cccggcgacc ggcccggacg gtggctccgc gaccggaccg gcgtcgactg caaagacgga
      961 ccgctgttcg ggccgggagg cgaaggtcac gcccggctga ccttcggtac ctctacggcc
     1021 atgctcgacg agataatcga ccgtctcgtc tccggcatcg gaacgagtcc agcatcgagt
     1081 ctggaaaccg atatcggaaa cagcgcgttc cattagcctt gcatcaccag tgagagaggt
     1141 gcgggccacc gacaaggtgg tcccttcgcc attttcccaa gagatcggat ccaacgctgt
     1201 agtggtccgg tctccttcca ggaggtaccc agatgaagtc cgcacccact gacgacatgg
     1261 tccatgtcac gcgctggcac tggggatcca aggaatggtc gccgttctcg gcgaccgaga
     1321 tggaccgccg ccagaacgcc ctccgggccc acctggccgc cgaaggcgtc gatgcctgcc
     1381 tcctgacgtc attccacaac atctgctact actccggatg gctgtactgc tacttcggac
     1441 gcaagtacgg catggtcgta gataccgagc acgccaccac aatctcggcg ggcatcgacg
     1501 gtggccagcc gtggcgtcgc acacatggcg acaacgtcgt ctactccgac tggcggagag
     1561 acaactacta ccaggctgtt cgggatctga cttcgggcgt gcgtcgtctc ggcgtggagt
     1621 tcgaccacct ctcggtcgac cagttccggg cactcgaggc agccctcccc gacgtcgaac
     1681 tagtcgacgt cggggaagcg accatgtgga tgcgaaccgt gaagtccgca gaggaacacg
     1741 acctcatccg tcatggcacc cggatctgtg acctcggcgc cgcggcctgc gtggaggccg
     1801 tagccgctgg cacatccgaa cacgaggtgg cgctagccgt cacgcaggcc atggtccgcg
     1861 agatcgcctc cagcttcgac ttcgtggagt tgatggacac ctggacgtgg ttccagtcgg
     1921 gcaacaacac cgacggcgcc cacaatccgg tcaccaacaa actcgtcgaa tcaggcgaca
     1981 tcttgtcgct gaacaccttc ccgatgatct tcggctacta cacggcactc gaacgaacca
     2041 tgttctgcga ccatgtgaca tccgacgaac acctccggct gtgggaggtc aacgtcgagg
     2101 tccacgagcg cgggctcgac ctcatccagc caggggtccg gtgctgcgac attgccgccg
     2161 aactgaacga catataccgc tcgcacggcc ttctgaagta ccggtcgttc gggtacgggc
     2221 acagctttgg cgtgctcagc cactactacg gccgcgaggc cggcgtcgaa ctccgcgagg
     2281 acgtcgagac ggtgctcgaa ccgggcatgg tcgtgtcgat ggagccgatg atcgccatcc
     2341 cgcccggtca gcccgggtca ggcggctacc gggagcacga catcttgatc gtgggtaccg
     2401 acggcgccga gaac
//
LOCUS       DASCMR010000427         3007 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002038249, whole genome shotgun sequence.
ACCESSION   DASCMR010000427 DASCMR010000000
VERSION     DASCMR010000427.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3007)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3007)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3007
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002038249"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1619)
                     /locus_tag="QGG16_09670"
     CDS             complement(<1..1619)
                     /locus_tag="QGG16_09670"
                     /inference="COORDINATES: protein motif:HMM:NF012546.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HJP25582.1"
                     /translation="MELSIQPYGAWPSPISAELLVAGAAGLGEVVVDAGPDGNTLGSS
                     VWWAESRPDEGGRTVVVRRGSDGVVADAVPAGVDVRTGVHEYGGGAWWVTDGVLVHSD
                     RSDERLIRREPGRPDVEPVILTPEPEVVRGLRYADGRITPDGRWYVCVREAHIGDPQT
                     GADSEPTNELVAVAMDGSQRVEVLVSGPDFVSSPRVSPDGGCLAWIQWNHPDLPWDDT
                     ELWLGDLSSDAHLSGARRVDPPSETGAHEAGESFFQPEWRADGVLHVVTDRDGWWHLY
                     RVAPDTDALEQLTSGAFEVATPQWVFGLSRYALVGDDVWFARREDGVDRLAVLSFDGS
                     AAEGNVADVEPLSAGTPATSIGSLAALDGGVALVAASWTTEPALVAVTCSGSEVIRAP
                     RDLGLGPGWLPVPEQVMFPTSGDEQAHAIVYPPTSPDHDGPVDERPPLIVLVHGGPTG
                     SVRTQLQLAIAYWTSRGFAVTDVDYRGSTGYGRPYRHRLRGGWGVLDVEDCVAAARYL
                     SSSSRPAAGRVDGDRLAIRGGSAGGFTVLAAL"
     gene            complement(1624..2823)
                     /locus_tag="QGG16_09675"
     CDS             complement(1624..2823)
                     /locus_tag="QGG16_09675"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HJP25583.1"
                     /translation="MSIERLSRRITAIAESATMAVDSKAKALKAAGEPVIGFGAGEPD
                     FATPDHIVAAAVAACQDPTSHKYTPAGGLPALKEALVDKTERDSGWRPEVARILVTNG
                     GKHAVYNTCAAVLNPGDEVLLPAPYWTTYPESIALAGATPVPLSTDTASGFRVTVDQL
                     EAARTPNTKALFFVSPSNPTGAVYPADEITAIGRWAVEHGIWVFADEIYEHLTYDGHE
                     HHSMRALVPEIDSHFVAINGVAKTYAMTGWRIGWMIGPADLIKAAGNLQSHATSNVAN
                     VSQRAALAAVSGDLTAVEEMRASFDRRRRTMTDMLRAIDGVDLLTPQGAFYAFPDLTA
                     FLGREIGGRVPTTTSALAAIILDEAKVAIVPGEAFGAPGYARLSFALGDDDLVEGLTR
                     IGNLLAG"
BASE COUNT          472 a         1051 c         1043 g          441 t
ORIGIN      
        1 agggcggcca gcacggtgaa cccaccggcg ctcccgcccc gaatggccaa tcggtcgccg
       61 tccacccgac cggccgccgg gcgactgctc gacgacaggt accgggccgc agccacgcag
      121 tcctcgacgt cgaggacccc ccacccgccg cgaagccggt gtcggtaggg ccggccgtac
      181 cccgtggaac cccggtagtc gacatcagtt accgcgaagc cccgactggt ccagtaggcg
      241 atggccagtt gcagttgggt tcgcaccgag ccggtcggcc cgccatggac gagcacgatc
      301 agcggcggcc gctcgtcgac cggcccgtcg tggtcggggc tggtcggcgg atacacgatg
      361 gcgtgggcct gctcgtcgcc cgaggtgggg aacatgacct gttcgggcac cgggagccat
      421 cccgggccga ggccgaggtc acggggcgcc cggatcacct cggaaccaga acaggtgacg
      481 gccaccagtg cgggctcggt ggtccacgat gccgccacca gagccacgcc gccgtccaac
      541 gcggccagcg acccgattga cgtggccggt gtcccggccg acagcggttc gacgtcggcg
      601 acgttcccct ctgcggctga cccgtcgaag gaaagcacgg ccagacggtc caccccgtcc
      661 tcccggcggg cgaaccacac gtcgtctccc accagcgcat agcgcgacag tccgaacacc
      721 cactgggggg tggccacctc gaaggccccg gaggtcaact gctccagcgc gtcggtgtcc
      781 ggggccaccc ggtacaggtg ccaccagccg tcccggtcgg tgaccacgtg cagcacgccg
      841 tcggcccgcc attccggctg gaagaatgac tctcccgctt catgggcacc tgtctccgag
      901 ggagggtcca ccctccgggc gccgctcagg tgagcatcgg aggacaggtc ccccaaccag
      961 agttcagtgt cgtcccacgg caggtcggga tggttccact ggatccaggc cagacagccg
     1021 ccgtcaggcg agacccgcgg cgacgacacg aagtcgggcc ccgagaccag cacctcgacc
     1081 cgttgggagc cgtccatggc caccgcgacc agctcgttgg tcggttccga atcggcgcct
     1141 gtctgcggat ccccgatgtg ggcctcgcgg acgcagacgt accaccgacc gtccggggtg
     1201 atccgcccgt cggcgtaacg caggccccgg acaacctcgg gctccggggt gagtatgacc
     1261 ggttcgacgt cagggcgacc gggttcccga cggatgagac gctcatcgga acggtcgctg
     1321 tgtaccagca cgccgtcggt cacccaccag gcaccgccgc cgtactcgtg gaccccggtt
     1381 cggacgtcga ccccggccgg aaccgcatcg gccaccactc cgtcggaacc gcgccggacc
     1441 accacggtcc gcccgccctc gtcgggacgg gactcggccc accacacgct gctaccgagg
     1501 gtgttcccgt cggggccggc gtcaacgacc acctcaccca gccctgccgc tccagccacc
     1561 aggagttccg cactgatggg cgacggccag gcgccatagg gctgtattga gagttccacc
     1621 aggtcaaccg gccagcaggt tgccgatccg ggtcaggcct tcgaccagat cgtcgtcacc
     1681 cagggcgaac gacagccggg cgtagccggg agccccgaag gcctcgcccg gcacgatggc
     1741 taccttggcc tcgtcgagga tgatcgccgc caacgccgac gtggtggtgg ggacccgtcc
     1801 accaatctcc cggccgagga aggccgtcag gtcggggaag gcgtagaagg cgccttgggg
     1861 tgtcagcagg tcgaccccgt cgatggcccg gagcatgtcg gtcatggtcc ggcggcgacg
     1921 gtcgaacgac gcccgcatct cctcgacggc cgtgaggtcg ccggagacgg cagccagcgc
     1981 ggcgcgctgg gacacgttgg ccacgttgct ggtggcgtgc gactggaggt tgccagccgc
     2041 cttgatcagg tcggctggtc cgatcatcca tccgatccgc cagccggtca tggcgtaggt
     2101 cttggccacg ccgttgatgg ctacgaagtg gctgtcgatc tcggggacga gtgcccgcat
     2161 cgaatgatgc tcgtgaccgt cgtaggtcag gtgctcatag atctcgtcgg caaacaccca
     2221 gatgccgtgc tcgaccgccc aacgaccgat ggcggtgatc tcgtccgccg ggtagacggc
     2281 ccccgtcggg ttggacggcg acacgaagaa caacgccttg gtgttcgggg tgcgggccgc
     2341 ctccaactgg tcgacggtga ctcggaaacc cgaagcggtg tcggtcgaca gtggcacggg
     2401 cgtggccccg gccagggcaa tggactccgg gtaggtcgtc cagtagggcg ccgggagaag
     2461 cacctcgtcg ccggggttca gcactgcggc gcacgtgttg tacacggcgt gctttccacc
     2521 gttggtgacg aggatccgtg ctacctcggg ccgccagccg gagtcccgct cggtcttgtc
     2581 gaccagggcc tccttgaggg cggggaggcc accggccggg gtgtacttgt ggctggtcgg
     2641 gtcctggcag gcggccaccg cggcggccac gatgtggtcc ggcgtggcga agtccggctc
     2701 gccggcaccg aacccgatta ccggctcacc ggccgccttc agggccttgg ctttggaatc
     2761 gacggccatg gtggccgatt cggctatggc agtgatgcgg cgagaaaggc gttcgatgct
     2821 catgggtctt cctggggagg tacgggatgg ttccgagact gggccagcct gccatctcga
     2881 gaacctgatc ccgaccggtt atcgccgatc agggcgtgat ggccgtccgg gcggtgggct
     2941 cagcagcttg ctggcggcgg gacaccccgc gtgccacggc agccagcagg acgtctcgca
     3001 actcgcc
//
LOCUS       DASCMR010000428         1640 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002065230, whole genome shotgun sequence.
ACCESSION   DASCMR010000428 DASCMR010000000
VERSION     DASCMR010000428.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1640)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1640)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1640
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002065230"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..975)
                     /locus_tag="QGG16_09680"
     CDS             complement(<1..975)
                     /locus_tag="QGG16_09680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015442163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0010498 - proteasomal protein catabolic
                     process [Evidence IEA];
                     GO_process: GO:0019941 - modification-dependent protein
                     catabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proteasome accessory factor PafA2 family
                     protein"
                     /protein_id="HJP25584.1"
                     /translation="MQRRIYGIENEYGITCTVEGSRRLSPDEVARYLFRKVVSWGRSS
                     NVFLVNGARLYLDVGSHPEYATPECDSVRQVVTHDKAGERILEQLVASAEDRLREEGI
                     DGDVYLFKNNTDSANNSYGCHENYLTTRRDEQAEYDEVLIPFLVTRQIWAGAGKIFEN
                     ARGGAGFSISQRAAHIWEGVSSATTRSRPIINSRDEPHADAERFRRLHVIVGDSNMSE
                     YAAFLKVGACGLLLRMLEEPNVVFRDMTLENPIRAIREISNDLTCRRPVRLASGREMS
                     ALDIQREFLDRAARFAQHREMSSEESQVLAMWEHCLDGMEKDPLSLDRE"
     gene            complement(1038..>1640)
                     /gene="prcA"
                     /locus_tag="QGG16_09685"
     CDS             complement(1038..>1640)
                     /gene="prcA"
                     /locus_tag="QGG16_09685"
                     /EC_number="3.4.25.1"
                     /inference="COORDINATES: protein motif:HMM:TIGR03691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005839 - proteasome core complex
                     [Evidence IEA];
                     GO_function: GO:0004298 - threonine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0010498 - proteasomal protein catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="proteasome subunit alpha"
                     /protein_id="HJP25585.1"
                     /translation="RGRAAIGCTFADGVLLCAENPSNTLRKVSEIYDRIGFVGVGRYN
                     EFDSLRKGGVRHADLKGYTYSREDVDARSLANLYAETLGGYFTHEPKPLEIEMLVGEM
                     GEKPDGDQLFHLLYDGTVMDMRTFAVIGGEADAIRGRFEETWSRDSALTVAVNAAVMA
                     LAGPERSLSADDLEVAVLARPNRRRAFRRIEGDELDGLLA"
BASE COUNT          286 a          541 c          499 g          314 t
ORIGIN      
        1 ctccctgtcc agactcagtg gatccttctc catcccgtcg aggcagtgct cccacatcgc
       61 gagcacctgg ctctcctcgg agctcatctc gcggtgctga gcgaatcggg ccgcccggtc
      121 aaggaactcc cgctggatat ccaaggcgct catctcgcgg ccgctggcca gacggaccgg
      181 ccgcctgcaa gtcaggtcgt tgctgatctc tcggatggcc cggatcgggt tttccaaggt
      241 catgtcccgg aagaccacgt tgggttcttc cagcatccgc aggagcagtc cacacgctcc
      301 aaccttcagg aaggcggcgt actcgctcat gttggagtcg cctacgatca catgcagtcg
      361 acggaatcgc tcggcatcgg cgtgcggctc gtcgcgggag ttgatgatgg ggcgggaccg
      421 cgtcgtagcg ctcgagacgc cctcccaaat gtgggcggcc cgctgactga tgctgaagcc
      481 cgccccgccg cgggcattct cgaatatctt ccccgccccg gcccaaatct ggcgggtaac
      541 caggaacggg atgagtacct cgtcatactc ggcctgctcg tcacgtcggg tggtcaggta
      601 gttctcgtgg cagccatagg agttgttggc cgagtcggtg ttgttcttga acaggtagac
      661 atctccgtct attccctctt cgcggagccg atcctcggcg ctggcaacca actgttcgag
      721 gatccgttca cctgccttgt cgtgggtcac cacctggcga actgagtcac attccggcgt
      781 ggcgtactcg gggtgggatc cgacgtcgag gtagagccgg gcaccgttca ccagaaagac
      841 gttggagcta cgtccccacg agaccacttt ccggaacagg tagcgggcca cctcgtcggg
      901 gctaaggcgc cgggagcctt ccaccgtgca ggtgatgccg tactcgttct cgatcccgta
      961 gatccgacgt tgcacgtggt ctccgaccgg tcagtttcgg gatccgacag gccgcaccac
     1021 gatgctccag gcccagctca cgccagaagg ccgtccagct cgtcgccctc gatccgtcgg
     1081 aatgcacgtc gcctgttggg gcgggccaac accgccactt cgaggtcgtc ggccgacagg
     1141 ctccgctccg gtccggccag cgccatgacg gcggcgttaa ccgccaccgt gagagcagag
     1201 tcgcgagacc aagtctcttc gaaccgacca cgaatggcat cggcctcgcc gccgatcaca
     1261 gcgaaggtcc gcatgtccat caccgtgccg tcatagagca ggtggaagag ttggtcgccg
     1321 tcgggcttct cgcccatctc gccgaccaac atctctatct ccagaggctt gggttcgtgg
     1381 gtgaagtacc cgccgagggt ctccgcgtag aggttcgcca acgagcgggc gtcgacatcc
     1441 tcgcggctgt acgtgtagcc cttcagatcg gcatggcgca cgccgccctt gcgaagactg
     1501 tcgaactcgt tatagcgacc gacacccacg aagccgatgc ggtcgtagat ctcactgacc
     1561 ttgcgaagag tgttggatgg gttctctgca cacagcaaga ctccatcggc aaaagtgcag
     1621 ccgatggcgg cacgtccccg
//
LOCUS       DASCMR010000429         3815 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002067606, whole genome shotgun sequence.
ACCESSION   DASCMR010000429 DASCMR010000000
VERSION     DASCMR010000429.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3815)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3815)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3815
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002067606"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1153)
                     /locus_tag="QGG16_09690"
     CDS             complement(<1..1153)
                     /locus_tag="QGG16_09690"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HJP25586.1"
                     /translation="MGTGNRDRSAVTPSLLIVAVIAVAIGVVLRFVALSPMWLDEAIS
                     ASLAGVVTEDVTGGWSALVDALRHDGHPPLYYVLLALWSVPFGESDGALRAFSGVLGV
                     VSLPLAWLVARRHLDRRGCVLVVSVLASSPFAVRYATEARMYALQLALLMALHLAVVR
                     VWERPSVYRSAVLAGVVAALLLTHYWSLFAIAVLGTAGLVAGTLNGRRAIRQAGHLVG
                     AVVAGCLAFLPWLPVFLDQLAHTGTPWSPAPRPTVVAALTLEAYGGGRGSEALLVVVV
                     LAVLVAVGLGCRAGSDRPVLGWTELVWLQVAVVLGVTTMALGAAVSLITDTAFQGRYG
                     VFALVPMVLACAVGLYRLTPRASVAALAVLVLLSGASVARELSRDRTQIG"
     gene            1214..2731
                     /locus_tag="QGG16_09695"
     CDS             1214..2731
                     /locus_tag="QGG16_09695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012229346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HJP25587.1"
                     /translation="MSALDLDKAHYPLMTATPDPSPVTTDGSSSIDSDLRPVIIGGGP
                     AGLTAAYQFGKAGVRATVLEADDVVGGISRTAVRDGWRFDIGGHRFFTKVRVVSDLWH
                     EILEPHDFLLRPRMSRIFYQGQFYDYPLRAMNALRNLGLIEAVRCLLSYLWVRIRPPK
                     DQTNFEGWVASRFGWRLYRTFFKTYTEKVWGLPGTELQADWAAQRIKNLSLLRAVVNS
                     LMPRRKQTDVTSLIEEFEYPRYGPGMMWERCAELVEEQGSDVHLSHPVRRIGHADGRA
                     FEVEAQGPHGPVVLEATDVISSMPLPHLVRAMDPPVPDDVRAAAAGLGFRDFLTVALV
                     VPREDGFPDNWIYVHAPDVEVGRIQNFGQWSPHLVKDGRTCLGLEYFVTEGDHLWTAD
                     DANLVELGKAEMASLGLLEPSRVEAGYVVRMPKAYPMYDAHYQDNVDRIRDWLAKHAA
                     NVYPVGRNGMHRYNNQDHSMFTAMLTVENVLAADHENWHDVWQVNVEEDYHEEIR"
     gene            2728..>3815
                     /locus_tag="QGG16_09700"
     CDS             2728..>3815
                     /locus_tag="QGG16_09700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25588.1"
                     /translation="MNCRNRIRWIIVLTGLGLMIRLAYVLFVERGDPLSGDGTYYHEA
                     ANLLADGLGFTEPYRYLHGGAQEALFVADPTSLETTANTVIPVGHIEPTAGHPPLWVL
                     ILGAFSFLGFTSVTAHQLVGVLTGTVGVAAVAWAGHQYGRSLGLRHVGTIAAGVTAVY
                     AGFWLNDGLVMSESLVVPVTAVLLGVAVRTARSPATRNVLLLGLAGGLAALTRAELVL
                     ALPVLALPILLWRDGSGSVASNAVRLRRYLGVGLVAATVMAPWVARNLAVFEEPVWLS
                     NGTGILVAQTNCDATYYGDKQGAWDFECALPQPLGPDGRATDESVRDIEYRQRGLDYL
                     GDHRGRFVTHVVPKRVGRYWGVYAPIDQL"
BASE COUNT          726 a         1325 c         1184 g          580 t
ORIGIN      
        1 ccccgatctg ggtccggtcg cgcgacagtt cacgggccac cgatgcgccc gacaacagga
       61 caaggacggc gagggccgcc acggaggccc ggggcgtcaa ccgatacagg cctactgcgc
      121 acgccagcac catcggcacc agagcgaaga ccccatagcg gccctgaaag gcggtgtcgg
      181 tgatcaggct caccgcggcc cccagcgcca tcgtggtcac gcccagcacc actgccacct
      241 gcaaccagac cagctctgtc catccgagga ccggccgatc cgagccggca cgacacccca
      301 ggccaacggc caccagaacg gcaagcacca cgacgaccag cagcgcctcg gagcctcggc
      361 cgccgccgta ggcctccaga gtgagggcgg ccaccacggt tggacggggc gccggcgacc
      421 acggggtccc ggtatgggcc agctggtcca agaagacggg caaccacgga aggaaggcca
      481 gacatccagc gaccacggcg ccaaccagat ggccagcctg acgaatcgca cgacggccgt
      541 taagcgtccc ggccaccagt cctgccgtgc ctagcacggc aatggcgaac aatgaccagt
      601 agtgggtcaa caggagggcg gccaccacgc cggccagcac ggcagaacgg taaaccgacg
      661 ggcgctccca gacccggacc acagcgagat ggagtgccat tagaagggca agctgcaggg
      721 cgtacatccg agcctcggtg gcgtaccgca cggcgaacgg gctggacgcc agtaccgaca
      781 ccaccagcac gcaaccccgc cgatcaaggt gccggcgggc caccaaccag gccaaaggaa
      841 gtgaaacaac cccaagcacc cccgagaacg cccggagcgc gccgtcggat tctccgaacg
      901 ggaccgacca cagggccaag agcacgtagt acaggggcgg gtgaccatcg tggcgcaacg
      961 cgtcgaccag agccgaccag ccgccagtca cgtcctccgt caccacaccg gccagcgagg
     1021 cggagatcgc ctcgtccagc cacatgggcg agagggccac aaatcgcagg acaactccga
     1081 tagccaccgc gatgaccgcc acgatcaaca ggctgggcgt caccgccgag cgatcacgat
     1141 tcccagtgcc cacgtggccg agcgtaccgt cgggcctctg ggccgcccgg tacgctcgct
     1201 ccggtcccgg tcgatgtccg ctctggacct cgacaaggcc cactatccgc tgatgaccgc
     1261 caccccggac ccctcccccg tgactaccga cggctcgtcg tcgatcgact ccgacctgcg
     1321 accggtcatc atcggtggcg ggccagccgg cctaaccgcc gcctaccagt tcggcaaggc
     1381 cggagtccga gccactgtgc tggaggccga cgacgtggtg ggcggcatca gtcggaccgc
     1441 tgtgcgtgac ggctggcgct tcgatatcgg cggccaccgc ttcttcacca aggtccgggt
     1501 cgtctccgac ctatggcatg agatcctcga gccacacgac ttcctactca ggccccgcat
     1561 gagtcgaatc ttttaccagg gccagttcta tgactacccg ctccgagcca tgaatgccct
     1621 ccgcaacctg gggctcatcg aggcggttcg ctgtctgctg tcctatctgt gggtccggat
     1681 aaggcccccg aaggatcaga ccaacttcga aggatgggtg gccagccggt tcgggtggcg
     1741 gctgtaccgg accttcttca agacctacac cgagaaggtg tggggactac cggggaccga
     1801 acttcaggcc gactgggcgg cccaacggat caagaatctg tcgctcctga gggccgtcgt
     1861 gaactcactg atgccccgac gcaaacagac tgacgtgacc agcctcatcg aggagttcga
     1921 atacccccgt tacggacccg gaatgatgtg ggagcgttgc gccgaactag tcgaggaaca
     1981 gggatctgac gtacacctct cccatccggt tcgtcggatt ggtcatgccg acggacgggc
     2041 cttcgaagtc gaggcacagg gcccccacgg cccggtcgtc ctggaggcca ccgacgtgat
     2101 ctcgtcgatg ccgctccctc acctcgtccg ggccatggac ccaccggtgc ccgacgacgt
     2161 gagggcggcc gccgccgggc tgggattccg ggatttcctc accgtggccc tcgtggtccc
     2221 ccgggaggac ggatttcccg acaactggat ctacgtacac gccccggacg tggaggtcgg
     2281 tcgtatccag aacttcgggc agtggtcacc gcacctcgtc aaggacggcc gtacttgcct
     2341 gggactcgag tacttcgtga ccgagggcga ccacctctgg acggccgacg atgccaactt
     2401 ggtcgagttg ggcaaggccg agatggcaag cctcgggcta ctagaacctt cacgagtgga
     2461 agccggctac gtggttcgga tgcccaaggc atatccgatg tacgacgccc actaccagga
     2521 caatgtcgac cggatccgag actggctggc taaacacgcc gccaatgtgt acccggtggg
     2581 tcgcaacggc atgcacaggt acaacaatca ggaccactcg atgttcaccg ccatgctcac
     2641 cgtcgagaac gtgctggccg ccgatcacga aaactggcac gacgtctggc aggtaaacgt
     2701 ggaggaggac taccacgagg agatccggtg aactgccgta acagaatccg gtggatcatc
     2761 gtactaaccg gtctcggcct gatgatccgt ctggcctacg tcctgttcgt cgagcgaggt
     2821 gatcccctca gcggcgacgg cacctactac cacgaggcgg cgaacctgct cgccgacggt
     2881 ctcggcttca ctgagccgta ccgctacctc cacggtggcg cccaagaggc attgttcgtc
     2941 gccgatccca cgtccttgga gaccaccgcc aacaccgtta ttcctgtcgg ccatatcgaa
     3001 cccaccgccg gtcacccacc gctctgggtg ctgatacttg gcgccttttc gttcctcggt
     3061 ttcacctcgg tcaccgccca ccaactggtc ggcgtcctga ctggcacggt cggagtagcc
     3121 gccgtcgcat gggccggcca ccagtacggt cgatcgctgg gcctacgcca cgtggggacg
     3181 atcgccgccg gagtgaccgc tgtgtacgca ggcttctggc tcaacgacgg cctcgtcatg
     3241 tcggagtcgc tagtcgttcc ggtaaccgcc gtcctcctgg gggtagcggt ccgaaccgct
     3301 cgatctccgg cgacccgcaa cgtcctcctg ctcggtctgg ccggcgggtt ggcagctctc
     3361 acccgggccg aactggtgct ggcactcccg gtcctggccc tcccgatcct cctctggcgc
     3421 gatgggtcgg gctccgtcgc gtcaaacgcc gttcgcctgc ggcgctactt gggggtcggg
     3481 ctggtcgccg cgacggtcat ggcgccatgg gtagctagaa acctagccgt atttgaggaa
     3541 ccggtatggc tgagcaacgg caccgggatc ctggtggccc agaccaactg cgatgccacc
     3601 tactacggag acaaacaggg tgcctgggat ttcgagtgcg cacttcccca accactgggc
     3661 cccgacgggc gggcgaccga cgagtcggta cgagacatcg aataccggca gcggggtctc
     3721 gactacctgg gcgaccacag gggccggttc gtcacccacg tggtccccaa gcgggtcggt
     3781 cgctactggg gtgtctacgc cccgatcgac caact
//
LOCUS       DASCMR010000430         1603 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002075354, whole genome shotgun sequence.
ACCESSION   DASCMR010000430 DASCMR010000000
VERSION     DASCMR010000430.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1603)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1603)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1603
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002075354"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..864
                     /locus_tag="QGG16_09705"
     CDS             <1..864
                     /locus_tag="QGG16_09705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HJP25589.1"
                     /translation="LPESERKRLRNILDRVKPKQHGIIVRTAAENITKEEIERDVRRL
                     LNQWEEIEKLAERSQAPSLLYREPEMAFRFIREEFNKDFRGVIIDDPDMFERVRTYVE
                     SVNPALVDRISYHDPETESLPLFERHHVHEQLRKALDRKVWLPSGGSLIIEHTEALTV
                     VDVNTGKNVGRSSLEETVFRNNLEAAEELARQLRLRDIGGIIVIDFVDMEVRSNREAV
                     ATTLRDALARDKTRTQVFDISDLGLVEMTRKRIGEGLLESFANACADCGGRGVHLNDE
                     LLAGSGRAGRR"
     gene            963..1271
                     /gene="rplU"
                     /locus_tag="QGG16_09710"
     CDS             963..1271
                     /gene="rplU"
                     /locus_tag="QGG16_09710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012230392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HJP25590.1"
                     /translation="MYAVIATGGKQYRVEEGQRVLVERLGAVDSEVELTPVMVVDGDD
                     VLATPAALSGASVSARIIGDAKGPKIRGFTYKNKSNQRRRWGHRQHLAEIEITGITRG
                     "
     gene            1276..1527
                     /gene="rpmA"
                     /locus_tag="QGG16_09715"
     CDS             1276..1527
                     /gene="rpmA"
                     /locus_tag="QGG16_09715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005229034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HJP25591.1"
                     /translation="MSKTKGGGSTRNGRDSNAQRLGVKVYDGSEVTAGSIIMRQRGTK
                     FHAGENVGRGGDDTLFATADGRVKFGRRGGRKLVDIIVD"
BASE COUNT          327 a          478 c          530 g          268 t
ORIGIN      
        1 ctaccggagt ccgagcgcaa gcgccttcgc aacatcttgg atcgggtgaa gcccaagcag
       61 cacggaatta tcgttcggac agcggccgag aacatcacta aagaggagat cgagcgcgac
      121 gtgcgtcggc tcctcaacca gtgggaggag atcgagaagc tcgccgaacg ctcacaggcg
      181 ccaagcctgt tgtaccgcga gcccgagatg gcgttccgat tcatccgcga ggagttcaac
      241 aaggacttcc gtggtgtgat catcgacgat cccgacatgt tcgagcgggt acggacctac
      301 gtggagagtg tgaacccggc attggtggat cgcatctcgt accacgatcc cgagaccgag
      361 tcgttacccc tgttcgaacg ccaccatgtg cacgagcagt tgcgaaaggc gctggaccgc
      421 aaggtctggc tgccatcggg tgggtcgctc atcatcgagc acaccgaggc cctgaccgtc
      481 gtcgacgtga acactggcaa gaacgtggga cgctccagcc tcgaggagac ggtgtttcga
      541 aacaacctcg aagcggctga ggaactggcc cgccagctac gactccgaga catcggcggc
      601 atcatcgtga tcgacttcgt tgacatggag gtccgatcca accgggaggc cgtggccacc
      661 accctgcgcg acgccttggc gcgggacaag acccggaccc aggtgttcga catctccgac
      721 ctcggcctgg tcgagatgac ccgaaagcgc atcggcgaag ggttgctgga gtcgttcgcc
      781 aacgcatgcg ccgactgtgg tgggcgtggc gtgcacctca acgacgagtt gctggccggc
      841 tccggtcggg cgggccgacg atgaacgccc ggacgacgat gcgaattggg cggcaacggt
      901 cacaccgccg ccactcggtg gccggtgggg gccccgtcgg ccaccggtaa cctgtgtcca
      961 ctatgtacgc agttatcgcc acgggcggaa agcagtaccg ggtcgaagag ggccagcgag
     1021 tcctcgtcga gcgactggga gcggtggaca gcgaagtcga gttgacgccg gtgatggtgg
     1081 tcgatggtga tgacgtgctg gccacccccg cagctctctc cggtgcgagc gtgtcggcac
     1141 gcatcatcgg tgatgccaag ggtccgaaga tccggggctt cacctacaag aacaagagca
     1201 accagcgtcg ccggtggggt caccgccagc atctggccga aatcgagatc actgggatta
     1261 cgaggggctg acgacatgtc aaagaccaag ggcggcggct caacccgcaa cggccgtgac
     1321 tccaatgcac agcgactggg cgtgaaggtc tacgacggca gcgaggtcac tgcaggaagc
     1381 atcatcatgc ggcagcgggg caccaagttc cacgccggtg aaaacgtggg ccgcggaggc
     1441 gacgacacgc tgttcgctac tgctgacggt cgcgtcaagt ttggccgtcg tggtggtcgc
     1501 aaacttgtcg acatcatcgt cgactgatca attcgcatat gggccgcctt cgggcggtcg
     1561 gaagatgacg caccgtttcg acggtgcgtc atcttcgttt tcg
//
LOCUS       DASCMR010000431         8467 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002088245, whole genome shotgun sequence.
ACCESSION   DASCMR010000431 DASCMR010000000
VERSION     DASCMR010000431.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 8467)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8467)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8467
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002088245"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..2174
                     /gene="polA"
                     /locus_tag="QGG16_09720"
     CDS             <1..2174
                     /gene="polA"
                     /locus_tag="QGG16_09720"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: protein motif:HMM:TIGR00593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HJP25592.1"
                     /translation="YAALRGDSSDNLPGVPGVGEKPAAKLINSYGGLDGIFAAADDQT
                     PKLRENLNASEDLARLNEEMMLLVRDVPLGLTADDLDQGPVDVERAGGLLDVLELSRA
                     RERLAALLGVDFGGDGADSRESRDGSTGASGELEVSVSVVTDAAGIEAIRVAAASTGP
                     IGLAAVAEPPSGPAGPDLGPGLAVSDGEEAWWIPAALVADPAVTGALAGLLGTDGPGV
                     AAHDVKPMLRALQRQGIGEVHLVLDTALAGYLLDPADATYDLGVLLERHARRMLPVTG
                     APDGQLDLSGEAADPSVEAGHRAAAVWTLRDPLISAMEAQGLLSLNADIEVPLVAVLA
                     RMEELGIGVDVAELTRLRDELTASCERLRGLVHEAAGEEFNVNSTKQLREILFEKLGL
                     TPGKKTKTGFSTDAATLERLRGDHPVVAHLLAYREVEKLRSTYGEGLLAEAGPGDRIR
                     ATFNQTVARTGRLSSDAPNLHNIPVRTESGRAFRRAFVPIDGCTLLVADYNQIELRVI
                     AHLADDPGLIAAFEAGDDIHTAVAARTWGIDPTDVTSEVRNRAKMVAYGLAYGMEAYG
                     LSQRLGSSVDEANEILESYFAAFPSVRDYMERTVDEARQKGYTETLFGRRRRIPELSS
                     PNFNVRQAGERQAMNAGIQGLAADIFKVALIRIDDRLRADGSASRLVLQVHDEVILEV
                     PIDEVVDVEAMVRSEMTGAYDLRVELAVEVATGATWADAKG"
     gene            2194..2925
                     /locus_tag="QGG16_09725"
     CDS             2194..2925
                     /locus_tag="QGG16_09725"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HJP25593.1"
                     /translation="MDHWFEGVADYLGDAYRRYSFTYGTVQEVDFLIDVLGLGEGSRL
                     LDVGCGPGRHSHELARRGIEVVGIDVSETFVDLARRDAPEGATFIHGDARTMTFDSEF
                     NAAISLCQGAFGLAGGPGADTAVLDPDGAILDRIVAAVRPGGGVALSAFSAYFQIRFL
                     AEADHFDADTGVNREHTALRNGDGVEKPAELWTTCFTPRELRLLADRAGLVVDEVRSV
                     TPGDYASRPPDLEHPEFLLIGRRGD"
     gene            3075..4553
                     /gene="rpsA"
                     /locus_tag="QGG16_09730"
     CDS             3075..4553
                     /gene="rpsA"
                     /locus_tag="QGG16_09730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HJP25594.1"
                     /translation="MSELTLIPSALDSPPMGSFDESGEYIPRPITEDDLGSLTLDEAY
                     SATMVDVENGQLVEGTVVRVDKDEVLLDIGYKSEGVIPPRELSIRNGVDPNEIVAVGE
                     KIEAVVLQREDKDGRLVLSKKRAQYERAWGRIEEIKEGDGMVSGAVIEVVKGGLIVDI
                     GLRGFLPASLVELRRVRDLQPFIGTTIDAKIIELDKNRNNVVLSRRAWLEETQKEQRE
                     DFLHNLRSGEIRNGTVSSVVNFGAFVDLGGMDGLVHVSELSWKHIDHPGSVVAVGDEI
                     EVQVLEVDLGRERISLSLKATQQDPWQEFAGAHQVGELVYGRVTKLVPFGSFVQVGDG
                     IEGLVHISEMSAHHVDLPEQVVTPGEELWVKIIDLDLQRRRISLSIKQAAEGGVVAAE
                     YQEHFGEHAYDDEGNFIGEENSEGQEAWADMFDASASVDGEAVAEDDPAAEATVEEAA
                     TEDAPVDESVDEEASTEEAAAEVEVVPEAEPEPEPEAESTEV"
     gene            4611..5258
                     /gene="coaE"
                     /locus_tag="QGG16_09735"
     CDS             4611..5258
                     /gene="coaE"
                     /locus_tag="QGG16_09735"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228820.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HJP25595.1"
                     /translation="MLEIGLTGGIGSGKSTVASLLVERGAVLLDADAIVRELQEPGTP
                     VFVAMVERWGDDIVAVDGRLDRQAVADRVFGDVDELVALNAIVHPAVADEMTRRRERL
                     AGTDATVILDIPLLVESGHEGLGGIIVVDVDPDVAVDRLVAHRGFTEDDARGRIARQA
                     SREDRLSRAHVVIDNSGTVADLSAEVDLAWAWIEGLERPVPGEAVTRIGSRTERS"
     gene            5290..7377
                     /gene="uvrB"
                     /locus_tag="QGG16_09740"
     CDS             5290..7377
                     /gene="uvrB"
                     /locus_tag="QGG16_09740"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HJP25596.1"
                     /translation="MDDLATPDMSTDSVPTGTVGPARGQPFKVHAPFSPAGDQPKAID
                     ELTDGIEGGERFQTLLGITGSGKSATIAWTIEKVQRPTLVIAPNKALAAQLANELREF
                     FPDNRVEYFVSYYDYYQPEAYLPTSDTFIEKDSSVNDEIDRLRHSATSSLLTRRDTIV
                     VASVSCIYGLGSPEHYEGQLLVLEVGQTIEHRATLSRLVDLRYERNDMVLGRGGFRVK
                     GDTLEIHPAYEETAFRVSLFGDEVEAITEVDPLTGEQLRQLEDLVIFPATHYMADAEN
                     IRRAIGGIEAELVEQLQVFEVEQKLLEAQRLRMRTEHDLEMLGELGYCNGVENYSMHL
                     DGRSYGDRPYTLLDYFPDDFLVVLDESHVAVPQLHGQYAGDRSRKATLIEHGFRLPSA
                     ADNRPLTFDEFTSRVGQVVFLSATPGNWEIEASSRVVEQIVRPTGLIDPEVVVRPTKG
                     QIDDLLEMIAGRVAAEQRVLVTTLTKKMAEDLTDYLLEQGVRVRYLHSDIDTVQRIEI
                     LRDLRLGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSETSLVQTIGRAARNV
                     DGQVVMYADAVTPSMQRAISETHRRRGLQQAHNEEHGIDPQTVRKAVNDILSMIRPDR
                     TAPTPKGRKRQAKRLIEDFAEMSVDDLQRLLYSLEQEMGEAATDLRFEYAARLRDEIR
                     EIERELRDLAEAT"
     gene            7436..>8467
                     /locus_tag="QGG16_09745"
     CDS             7436..>8467
                     /locus_tag="QGG16_09745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012228766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HJP25597.1"
                     /translation="MSERLIVKGAREHNLRDVDLDLPRDRLICFTGISGSGKSSLAFD
                     TIYAEGQRRYVESLSAYARQFLGQMDKPDVDFIEGLSPAISIDQKSASRNPRSTVGTI
                     TEVYDYLRLLYARIGIPHDPETGERLVRQTPQQIVDRILEMDAGTRFQVLAPVVRGRK
                     GTYDTLLGDLAGQGFSRAIVDGEPYELADLERGDLDLARYEMHTIQVVVDRLVLKDGI
                     ERRLTESMETALALAEGIAEVQVMPRDGEVDTEGNSVEPRTIVFSQHLSRPSDGRSFE
                     DLAPRNFSFNSPYGACDHCDGLGTVFQVDADLVVPNPELGLGEGAIAPWSGGNNRYFG
                     RLVEAVTEEL"
BASE COUNT         1543 a         2621 c         2761 g         1542 t
ORIGIN      
        1 cctacgccgc tttgcggggc gactcctctg acaacctgcc tggagttccc ggggttgggg
       61 agaagccggc cgccaagctg atcaactcct atggggggct cgacgggatc ttcgccgcag
      121 ccgacgatca gacgcccaag ctccgggaga acctgaacgc cagcgaagac cttgcccgtc
      181 tgaacgagga gatgatgctg ctagtgcgcg atgtgccgct cgggttgacc gccgacgacc
      241 tagaccaggg ccccgtcgac gtggagaggg ccggtgggct actcgacgtg ttggagctga
      301 gccgggcccg cgaacgtttg gctgccctgc tgggcgtgga cttcggtggc gatggggcgg
      361 attcacggga gagccgagac ggatctacgg gggcctcggg agagttggag gtttccgtca
      421 gcgtcgtcac agatgcggca ggcatcgagg ccatcagagt ggcagctgcg tccaccggcc
      481 cgattggcct ggcagcggtg gccgagccgc catcaggtcc cgccggccct gatcttggcc
      541 cgggcctcgc agtttccgat ggtgaggagg cctggtggat tcccgccgcc ctggtggctg
      601 atccagcggt caccggtgcg ttggcggggc ttctgggtac tgacggcccg ggtgtagcgg
      661 cccatgacgt caagccgatg ttgcgggcct tacagcggca gggcatcgga gaggtccacc
      721 tagtgctgga cacagcgctt gccgggtacc tgctggaccc ggctgacgcc acctacgacc
      781 tcggggtgct tctggagcgt catgccagac ggatgcttcc ggtgaccgga gcgcccgatg
      841 gacagttgga cctcagtggc gaggcagccg atccgtcggt ggaggccgga caccgggcgg
      901 ccgcggtctg gacccttcgg gacccgctga tttcggccat ggaggcccaa gggctccttt
      961 ccctgaacgc tgacatcgaa gttcccctcg tcgccgtgtt ggctcgcatg gaggagttag
     1021 gcatcggcgt ggacgtcgcc gagttgaccc gcctccgtga cgagctgacc gccagttgcg
     1081 aacgcctgcg aggccttgtc cacgaggcgg ccggggagga gttcaacgtc aactccacca
     1141 agcagctcag ggagatcctt ttcgagaagc tgggtctcac tcccggcaag aagaccaaga
     1201 ccgggttctc cacggacgcg gccaccctgg agcgcctcag gggtgatcat cctgtggttg
     1261 ctcacctgct cgcctaccgc gaggtcgaga aactccggtc cacgtacggc gaaggcctgt
     1321 tggctgaggc tggtccgggc gaccgaatcc gcgccacgtt caaccagacg gtcgcccgaa
     1381 cgggtcgact cagctcggat gcaccgaacc tccacaacat cccggtccgc accgagtccg
     1441 ggcgggcctt tcgcagggcc ttcgtaccga tcgacggctg tacgttgctg gtagccgact
     1501 acaaccagat cgagttacgg gtcatcgccc acctggccga cgacccgggt ttgatcgcag
     1561 cgtttgaggc tggtgacgac atccacaccg cggtggccgc ccggacgtgg ggaatcgacc
     1621 cgaccgacgt gacctccgag gtgcggaacc gggccaaaat ggtggcctac ggactggctt
     1681 acggcatgga ggcctacggg ctgtcccaac ggctgggctc atcggttgac gaggccaacg
     1741 agatcctcga gtcgtacttc gccgcctttc cgtcggtccg cgactacatg gagcggacgg
     1801 tcgacgaggc ccgccagaag ggctacacgg agaccctgtt cgggcgccgt cgacgcatac
     1861 cggaactctc gtcgcccaac ttcaacgtgc gtcaggccgg cgaacgccag gccatgaacg
     1921 cgggtatcca gggtctggct gccgacatct tcaaggtggc cctcattcgg atcgacgacc
     1981 ggctccgagc tgacgggtcg gcatcccgtc tagtgctcca ggtccacgac gaggtgatcc
     2041 ttgaagtgcc gatcgatgag gttgtcgacg tggaggccat ggtccgttcc gagatgaccg
     2101 gggcctacga cctgcgggtg gagttggccg tcgaggtcgc caccggcgcc acctgggctg
     2161 acgccaaggg ctgagggatc ggatctctga tagatggatc actggttcga gggtgtcgct
     2221 gactacctgg gagatgccta ccgtcgctac tcattcacct acgggaccgt ccaggaggtc
     2281 gactttctta tcgacgtgtt gggtctcggt gaaggatccc gcctactgga cgtcggttgc
     2341 ggcccgggac gccacagcca tgaactggcc cgacgtggca ttgaggtagt gggcatcgac
     2401 gtgtcggaga ccttcgtgga cctggcccgt cgagacgccc cagaaggagc cacgttcatc
     2461 catggcgatg ctcggaccat gactttcgac agcgagttca acgcggctat ctcgctctgc
     2521 cagggagcgt tcggcctggc tggagggccg ggagccgata cggccgtgct ggaccccgac
     2581 ggagcgatcc ttgaccgcat cgtggccgcc gtccggccgg gagggggcgt ggccctgagc
     2641 gccttttcgg cctacttcca gattcgcttt ctggctgagg ccgaccactt cgacgccgat
     2701 accggcgtca accgggagca cacggcgcta aggaacggcg atggcgtcga gaagccagct
     2761 gaactctgga ccacctgttt cactccgcgg gaactccgcc tgctggccga ccgcgccgga
     2821 ctggtggtcg acgaggtccg ttcagtgact cccggcgatt acgcctctcg tccgccggat
     2881 ctagaacatc ccgagttcct gctgattgga cgacgaggcg actgacggac ctgccctgaa
     2941 tttggttgag ttccgtccga tggggtcgcg atgggggtcc ggtaggatct ccgggtccgt
     3001 ttcgcgtgtg cacatgccgt gtttatgcgt ccggaatgac ctgtccacct actcccatcc
     3061 gacgagaaga acacgtgtcc gaactgactc ttattccctc cgccctcgac tccccgccca
     3121 tgggaagttt cgacgagagc ggggagtaca tcccccgtcc catcaccgag gatgatctcg
     3181 gttccctgac gcttgacgag gcctactcgg ccaccatggt cgacgttgag aacggccaac
     3241 tggtcgaggg caccgtcgtc cgggtcgaca aggacgaggt cctgctggat attggttaca
     3301 agtccgaagg tgtcattccg cctcgcgagc tttcgatccg caacggtgtg gatccgaacg
     3361 agatcgtggc cgttggcgag aagatcgaag ccgtggttct ccagcgtgag gacaaggacg
     3421 gccgtctggt cctgtccaaa aagcgggccc aatacgagcg ggcctggggt cggatcgagg
     3481 agatcaagga aggcgacgga atggtttccg gcgccgtgat cgaggtcgtc aagggcgggc
     3541 tgatcgtcga catcggtctc cgtggcttcc ttcccgcttc actcgtggag ctacgccggg
     3601 tccgtgacct acaacccttc atagggacca cgatcgacgc caagatcatc gaactggaca
     3661 agaaccgcaa caacgtggtc ctgtctcgcc gtgcttggct tgaagagaca cagaaggaac
     3721 agcgcgaaga tttcctgcac aaccttcgct ccggagagat ccgtaatggc accgtgtcca
     3781 gcgtcgtcaa cttcggtgcg tttgtcgacc tcggcggcat ggacggcctc gtgcatgtgt
     3841 cggagttgtc gtggaagcac attgaccacc ccggttcggt agtcgcagtc ggcgacgaga
     3901 tcgaggtgca ggttctcgag gttgacctcg gccgtgagcg catcagcctc tcgttgaagg
     3961 ccactcagca ggatccgtgg caggagttcg ccggggccca ccaggtgggt gaactggtat
     4021 atggccgggt caccaagttg gtgccgtttg gctcgttcgt ccaggtgggt gacgggatcg
     4081 agggtctggt ccacatctca gagatgtcgg cccaccacgt ggaccttccc gagcaagtcg
     4141 tgacgcccgg cgaggaacta tgggtcaaaa tcatcgacct cgaccttcag cgtcgccgga
     4201 taagcctgtc gatcaagcag gccgccgagg gtggggtcgt ggccgccgag tatcaggaac
     4261 acttcggtga acacgcctac gacgatgagg gcaacttcat cggagaggag aactccgagg
     4321 gccaggaagc ctgggccgac atgttcgatg cctcggcttc tgttgacgga gaagcggtgg
     4381 cagaggacga ccctgccgct gaagccaccg ttgaggaggc ggccacagaa gacgccccgg
     4441 tcgacgaatc tgtcgacgag gaggcctcta ccgaggaagc ggcggccgag gtcgaagtgg
     4501 ttcccgaggc tgagcccgag cccgagcctg aggctgagtc caccgaagtc tgacccgaag
     4561 gcctggtttt cttcggtgga tttgaccttc gctaccaggg gacaaactcg atgctcgaga
     4621 tcggcctgac cggcggcatc ggctcgggca agtccaccgt cgcctcgctc ctagtggagc
     4681 gaggcgctgt ccttctggac gcagacgcga tcgttcgcga gcttcaggag ccaggcacgc
     4741 cggtgttcgt ggccatggtg gaacgctggg gcgacgacat cgtggccgtc gacgggagac
     4801 tggaccgtca agcggtggcc gacagggtct ttggtgatgt cgacgaattg gtggcactga
     4861 acgccatcgt gcatcccgcg gtggccgatg aaatgacccg gcgacgtgag aggctggccg
     4921 gcaccgatgc cacggtgatt ctcgacatcc ccctgctcgt cgaatcgggc cacgagggac
     4981 tgggcggcat catcgtggtc gacgtggatc ccgatgtggc cgtggatcgc ctcgtggccc
     5041 atcgggggtt caccgaggac gatgcacggg gccgaatcgc tcgtcaggcc tcccgagagg
     5101 accgtctatc ccgggctcac gtcgtgatcg acaactccgg gacggtggcc gacctgtccg
     5161 ccgaagtgga cctggcatgg gcttggatcg agggtctgga gcggcccgtt cccggtgagg
     5221 ccgtgacccg cattgggagc cgcaccgaac gctcctaggc ccgtcacggc tgctggttac
     5281 gctccacgaa tggacgacct ggccactccg gatatgtcta ccgattcagt gcctaccggg
     5341 accgtcggac cagcccgggg tcagcccttc aaggttcatg cacccttttc gcctgctggc
     5401 gaccagccaa aggccatcga cgaattgacc gacggcatag agggtggcga gcgattccag
     5461 acgttgctgg gcatcaccgg cagtggcaag agcgccacca ttgcgtggac catcgagaag
     5521 gttcagcggc ccacgttggt catcgctccc aacaaggccc tagccgccca actggccaac
     5581 gagctccggg agttcttccc cgataaccgg gtcgagtact tcgtctcgta ttacgactac
     5641 taccaacccg aggcctacct tccgacgtcg gacaccttca tcgagaaaga ctcgtcggtg
     5701 aacgacgaga tcgaccgcct ccgacattcg gccacatcgt cactgctgac ccgtcgcgac
     5761 accatcgtgg tggcgtcagt ttcgtgcatc tacgggctcg gatcacccga gcactacgag
     5821 ggccaactcc tggtgttgga ggtcggccag accattgagc accgggccac tttgagtcgc
     5881 ctcgtcgacc ttcgctacga acgaaatgac atggtgctgg gccggggcgg gttccgggtg
     5941 aagggcgaca cgctggagat tcatcccgcc tatgaggaga cggcgtttcg ggtttcgttg
     6001 tttggcgacg aggtggaggc cattaccgag gtggatccac ttaccggtga acaactccgc
     6061 cagctcgagg acctggtgat cttcccggca acccactaca tggccgatgc agagaacatc
     6121 cggcgggcca tcggcggcat cgaagccgag ctggtcgaac agctccaagt cttcgaagtc
     6181 gaacagaagc tcctcgaagc ccagcggttg cggatgcgca ccgaacacga cctcgagatg
     6241 cttggcgagc tgggctactg caacggggtc gaaaactact ccatgcacct cgacggtcgc
     6301 tcgtacggtg atcgtcccta caccctgctc gactactttc ccgatgactt cttggtggtc
     6361 ctcgacgagt cccacgtggc cgtgccccag ctgcacggcc agtacgccgg cgaccgaagc
     6421 cgtaaggcca cgctcatcga gcatggtttc cggttgccgt cagcggctga caaccggcca
     6481 ctgacctttg acgagttcac cagtcgggtc ggacaggtgg tgtttctgtc ggccacgccc
     6541 ggcaactggg agatcgaggc cagtagtcgg gtggtcgaac agatagtgcg ccccaccggt
     6601 ctgatcgatc ccgaggtggt agttcgcccc accaaaggtc agattgatga cctgttggag
     6661 atgatcgctg ggcgggtggc agccgaacag cgagtgctag tcaccacgct gactaagaag
     6721 atggccgagg acctcaccga ctacctgctc gagcaagggg tacgggtccg ttacctgcat
     6781 tccgacatcg acacggtgca gcgcatcgag atcctgcgtg acctacgact gggggagttc
     6841 gacgtgctcg tcgggatcaa cctgctgcgt gaaggcctcg atctccctga ggtgtcgcta
     6901 gtggccatcc tggacgccga caaggagggt tttctgcgaa gcgagacgtc gctggtgcag
     6961 accattggca gggcggcacg caacgttgat ggccaggtgg tgatgtacgc cgatgccgtc
     7021 acgccgtcta tgcaacgggc gatctccgag acccatcgcc gtcgaggact ccaacaggca
     7081 cacaacgagg aacacgggat cgacccgcag acggtccgta aggcggtgaa cgacatcctc
     7141 tcgatgatcc ggcctgaccg cacagcaccc accccgaagg gaaggaaacg tcaggccaaa
     7201 cgcctcatcg aggactttgc cgagatgagc gtcgacgacc tccaacggct tttgtacagc
     7261 ctcgaacagg agatgggtga ggccgcgaca gacctgcgtt tcgagtatgc ggcccgtctt
     7321 cgcgatgaga tccgcgagat cgaacgggag cttcgggacc tcgccgaggc cacttgacgg
     7381 gctaactggt tgggctcccg actggccctc atgaccggcc cctaggctcg ctcgggtgtc
     7441 tgaacggctg atcgtcaagg gtgcgcggga acacaacctc cgcgacgtcg atctggacct
     7501 ccctcgggac cgactcatct gtttcaccgg catttccggt tccggcaaat cgtcgctggc
     7561 ctttgacacc atctacgccg aggggcagcg ccgctacgtc gagtcactgt cggcctacgc
     7621 ccgtcagttc ctgggccaga tggacaagcc tgacgtggac ttcatcgaag gcctatcgcc
     7681 tgccatatcg attgaccaga agagcgcttc gcgaaatccc cggtcgacgg ttggaaccat
     7741 caccgaggtt tacgactacc tgcgcctgtt gtacgcccgg atcggcattc cacacgatcc
     7801 ggagactggc gagcgactcg tccgtcagac tccacagcag atcgtggacc ggattctcga
     7861 aatggacgct ggtacacgct ttcaggttct ggccccagtg gttcgcggcc ggaaggggac
     7921 ctacgacacc ctgctgggcg acctggccgg ccaggggttc agccgtgcca tcgttgacgg
     7981 cgagccgtat gaacttgccg acctcgaacg gggcgacctg gacctggctc gttacgagat
     8041 gcacaccatt caggtagtcg tcgaccgtct ggtactcaaa gacgggatcg agcgacgcct
     8101 cacagagtcc atggagacgg ctctggctct cgctgagggg atcgccgagg ttcaggtgat
     8161 gccgcgcgac ggtgaagtcg atacagaggg aaactcggtc gagccgcgca ccatcgtgtt
     8221 cagccagcat ctttcgcggc ccagcgatgg ccgatcgttc gaggacctgg ccccccggaa
     8281 cttctccttc aatagtccct acggggcgtg cgaccattgc gacggccttg gcacggtctt
     8341 ccaggtggac gccgacctcg tagtgccaaa ccctgagctg ggcctcggtg aaggagcgat
     8401 tgccccgtgg tccggcggca acaaccgcta cttcggacgc ctcgtcgaag cggtgaccga
     8461 ggagttg
//
LOCUS       DASCMR010000432         3780 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002097930, whole genome shotgun sequence.
ACCESSION   DASCMR010000432 DASCMR010000000
VERSION     DASCMR010000432.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3780)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3780)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3780
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002097930"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..2548)
                     /locus_tag="QGG16_09750"
     CDS             complement(<1..2548)
                     /locus_tag="QGG16_09750"
                     /inference="COORDINATES: protein motif:HMM:NF023275.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-(1->3)-arabinofuranosyltransferase family
                     protein"
                     /protein_id="HJP25598.1"
                     /translation="MILILAYVPLLLNDPGRVAADTKAYLYLDPGRLMERATSMWQPE
                     VAMGTVTHQNIGYLWPIGPFYWLADIAGLPDWLAQRLWMGTVLAAAGLGVRWLLRTLG
                     WRDGGVLVASLAYMLSPYLLNYVDRHSVILLPWAGLPWMLGLTTRSLRTPGWRHAAIF
                     GLVTLTVGGVNASSLLLVGLGPALWLLWSGLEASVPWRRVVGAAVRIGAAFVLTGLWW
                     MVGLAVQASHGLPTLRLTENYRVVSDAATAPELFRGLGYWYFYGQGRLGAWIEPSTSY
                     TRWALPLSFALPLLALLAAAVVRFRHRGHALALIVVGILVGIGAHPYDDPSLLGRIFR
                     EWTLTDVGLALRSTPRALPLSVLGLAICLGAGVGALARWRPRVGPAVTGVLCLLVVAN
                     LSPLWQGEMLGSLVQRPEDIPAYWHDAAEHLETPDSSAPGTGTRVLEIPGSDFAAYRW
                     GNSGDPVLPGLIDRPHVARELIPQGSPASAALLVALDTEIQEGRLDADALAPLARLMG
                     VGDVVLRSDLQFERFRTPRPVDLWEGVRDAPGFDRLIEFGSPLPNVAGPQRPLLDQHT
                     LSRPASAEDPAPVVVLPVTDPVPILRTADPSRPILVSGDAEGIVAAAGEGLLEAGRPL
                     FLTGSFSHDAVRVLDLVGPGTRIVLTDSNRKDGHRWGTIRETAGYTERVDEQAMGLDL
                     SDHALTVIDDLPGVQTVAIQYALRVDASGYGNPVTFTPGDRPFHAVDGDSDTAWTVGA
                     FNHVVGERLILTLDDPVPVAHLVLEQARLRGQNRWITQLAVGLDEQSPLLVDLDETSH
                     TAPGQVVALPDRGVVSRITLEIRATDVGQLDHYAGVTGVGFAEVRVGTPGS"
     gene            complement(2602..3567)
                     /locus_tag="QGG16_09755"
     CDS             complement(2602..3567)
                     /locus_tag="QGG16_09755"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012744.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HJP25599.1"
                     /translation="MAGQPATIMRDGVEVVRRAGRHQVFPRAVLAELLGRHGRRDALV
                     EVWNGMPFLSPLWARGPRMVIQHHDHADMWPLALPPGPARLGSILEHRLAPRWYRSTP
                     VVTLSASSRDGLIAGVGHRPDGVHVVEPGVHRRFSPAGRRDSEPLIVSVGRLTASKRV
                     DVLIRAFAEARDQVAGLRLEVIGDGPEEEALRALAGDLGVYAATTFRGRVSNDELVAA
                     YRRARLVASASISEGWGMTLTEAAACATPSVATDIAGHRDAVIDGRTGLLATTDDELA
                     GLLVEALGSRWDQLSAGALTGATRFDWDRTASGAFRVLASTVPAQ"
     gene            complement(3583..>3780)
                     /locus_tag="QGG16_09760"
     CDS             complement(3583..>3780)
                     /locus_tag="QGG16_09760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25600.1"
                     /translation="PPEPSADDRTSVQKLGDDLDECIDRSGIRRVHVLAWRDLEDPEA
                     GGSELHLQEVTSRWANAGLEV"
BASE COUNT          744 a         1229 c         1251 g          556 t
ORIGIN      
        1 cgcttcctgg tgtaccgacc cgcacctcgg caaatccgac gccggtcaca ccggcgtaat
       61 ggtcgagttg gccgacatcg gtggcccgga tctccagagt gatgcgagac accacgcccc
      121 tatctggcag ggcgactacc tggcccggtg cggtgtggga ggtctcgtct agatcaacca
      181 gcaggggaga ttgttcgtcc aacccaacgg caagctgcgt gatccaacgg ttttgacctc
      241 gaagccgagc ttgttccagc accaggtggg ccacagggac ggggtcatcc agtgtcagaa
      301 ttagtcgttc gccaacgacg tggttgaagg ctcccacggt ccaggccgta tcggagtcgc
      361 cgtccaccgc gtggaacggc cgatcgccag gcgtgaaggt caccgggttg ccgtacccac
      421 tggcgtcgac tcgcagggcg tactggatag ccaccgtctg aacgccgggt aggtcgtcta
      481 tgacggtcaa ggcgtggtcc gaaaggtcga gacccatggc ctgctcgtct actcgctcgg
      541 tgtacccggc cgtctctcga atggtgcccc aacggtgccc gtctttccga ttggagtcgg
      601 tgagaacaat gcgggtgccg ggccccacca gatcaagtac ccggacagca tcgtgagaaa
      661 aggagccggt caggaagagc ggtcggccag cctccagcag tccctcaccg gcggcggcca
      721 cgattccctc agcatcaccc gagaccagaa tcggccggga tggatcagcg gttcggagaa
      781 tgggaacggg atcggttacc gggaggacca ccaccggcgc gggatcctcg gcgctggccg
      841 gtcgactcag ggtgtgctga tccaggagag ggcgctgcgg tccggccacg tttgggagcg
      901 ggctgccaaa ctcgatcagg cgatcaaatc ccggtgcgtc acgtactccc tcccatagat
      961 cgactggtcg gggcgtccgg aaacgctcga actgcagatc agatcggagg accacgtctc
     1021 ccacgcccat caagcgagct agaggagcca gggcatcggc gtccagacgg ccctcctgga
     1081 tctccgtgtc caatgcgacc agcagggctg ccgaagccgg agagccctga ggtatgagct
     1141 cgcgcgccac atgcggacga tcaatgaggc cgggtaacac tgggtcgcca gagttccccc
     1201 agcggtaggc cgcaaagtcg ctcccgggaa tctccagcac cctggtgcca gttcctggag
     1261 cagatgagtc cggggtctca aggtgctctg ccgcgtcatg ccagtaggcg gggatgtcct
     1321 cgggacgttg gaccagtgag ccgagcatct ctccctgcca caggggagac agattggcca
     1381 ccacgagtag acaaaggaca ccggtgacag ccggaccgac tcgggggcgc cagcgagcca
     1441 aagctcccac cccggcccca aggcagatgg ccaggccgag gaccgacagg gggagggccc
     1501 gcggtgtgct gcgcagtgcc aacccgacat cggtaagtgt ccactcgcgg aagatccggc
     1561 cgagaagtga tgggtcgtcg tacgggtggg ccccgatgcc cacgaggatc ccaaccacga
     1621 tcagggccag ggcgtggccc cgatggcgaa accgaaccac ggcagcggcc aggagtgcca
     1681 gtaggggcag agcgaacgac aacggcagtg cccaccgggt gtacgaggtg gagggttcga
     1741 tccacgcccc taggcgaccc tgaccgtaga agtaccagta tcccagtccc cggaacagtt
     1801 cgggagctgt ggccgcgtcc gacaccaccc gatagttctc cgtcagccga agggtgggta
     1861 ggccgtggct ggcttggact gccagaccga ccatccacca gagaccggta agcacgaagg
     1921 ccgcaccgat acgaaccgcg gcgcccacaa cgcgtcgcca tggcaccgag gcctcgaggc
     1981 ccgaccagag cagccacagg gcggggccta gcccaaccag aaggagcgaa ctggcgttca
     2041 ccccacccac cgtcagggtc accagaccga aaatggccgc atgacgccag ccgggagtgc
     2101 gcagcgaccg ggtcgtgaga ccgagcatcc acggtaggcc ggcccatggc aggaggatca
     2161 ccgaatgccg atccacgtag ttgaggagat acgggctgag catgtaggcc agtgaggcaa
     2221 ccaggacgcc accgtcccgc caccccaggg ttcgcagcag ccagcgcacg ccgagaccag
     2281 cggcagctag cacagttccc atccagagtc gttgtgccag ccagtcaggc aagccagcga
     2341 tatcggcaag ccagtagaag gggccgatcg gccacaggta gccaatgttc tggtgggtca
     2401 cggtccccat ggcaacctcg ggctgccaca tcgatgtggc ccgctccatg aggcgaccgg
     2461 ggtccagata caggtacgcc ttggtgtcgg ccgccacccg accgggatcg ttcagcagca
     2521 gcggaacgta ggccagtatg aggatcacca accgctccaa ggcggatccg gacagcctca
     2581 ggaagccagc cggggatcgg atcactgggc gggcaccgtg gaggccagta cccggaacgc
     2641 ccctgaggcc gtgcgatccc agtcaaatcg agtagccccc gtgagggcgc ccgccgaaag
     2701 ctggtcccag cgcgatccca aagcctccac cagtagtccg gccagttcat cgtcggtggt
     2761 ggccagcagg ccggtgcgtc cgtcaatgac ggcgtcacgg tgtccggcaa tatcggtggc
     2821 aaccgacggg gtggcacacg cagcggcctc agtcagggtc atgccccagc cctcgctgat
     2881 cgacgcgctg gccacgagtc gagcccggcg ataggccgct acgagctcgt cgttggagac
     2941 ccgtccacgg aaggtcgtgg ctgcgtacac gccgaggtcg ccagccaggg cccgaagggc
     3001 ctcctcctcg ggaccgtcac caatgacctc cagacgaagt ccagccacct ggtccctggc
     3061 ctcggcaaaa gcccggatca gaacgtccac tcgctttgat gcagtgagtc ggcccaccga
     3121 gacgattagg ggttcggagt cacgccgacc agccggagag aaccggcggt gcacgccggg
     3181 ttcgaccacg tggacgccat cgggccggtg gccgaccccg gcgatcagtc cgtcgcgtga
     3241 tgacgccgag agagttacga ccggcgtgga ccggtaccac cgtggagcaa ggcgatgctc
     3301 cagaatcgat cccagccgtg ccggacccgg tggtagagcc agtggccaca tgtcggcgtg
     3361 gtcgtggtgc tggatgacca tacgtgggcc gcgggcccac aggggagaga ggaagggcat
     3421 cccgttccag acctcgacaa gggcatcccg tcgaccatgt cgacctagta gttcggccag
     3481 tactgcccgc gggaagacct ggtggcgtcc tgcccgacgc actacctcga cgccatcacg
     3541 catgatcgtg gccggttggc cggccacttc agatgtccgt attcagacct ccaggccagc
     3601 attcgcccac cggctggtga cttcctgaag gtggagttcg gacccaccgg cttcggggtc
     3661 ttcaaggtcg cgccaagcca ggacatggac acgtcggatg cccgacctgt cgatgcattc
     3721 gtcgaggtcg tccccgagct tttgaacgga tgtccggtcg tctgccgacg gttcaggggg
//
LOCUS       DASCMR010000433         4322 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002113111, whole genome shotgun sequence.
ACCESSION   DASCMR010000433 DASCMR010000000
VERSION     DASCMR010000433.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4322)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4322)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4322
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002113111"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(336..1319)
                     /locus_tag="QGG16_09765"
     CDS             complement(336..1319)
                     /locus_tag="QGG16_09765"
                     /inference="COORDINATES: protein motif:HMM:NF013200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HJP25601.1"
                     /translation="MSLLVICDHDRGTLSDASLEALTFGRPLAVAAGLEMAAVVIGEG
                     ADSAAAGLGAYGASTVHVASHPLLTDFGPEAWGETVVQLVRGTGATAVLACGTDRGNE
                     VVAQVAARLDQPFVANCRTVDPTGDGSGNWTMTRVQWGGSLLEDAALTAEIHLVTVAH
                     HSVEGVAAEAPASGTMVSFVPELDDALARTVVADRVVLTRGITLSTAPVVVGGGRGVG
                     SAEAFAPLEELAGELGGVVGCSRAVTNNGWRPHSDQVGQTGTRIAPEIYIASGISGAI
                     QHWVGAMAAKNILAINTDGEANMVTRAGHAVIGDLHQVIPAITEEVRRRRG"
     gene            complement(1316..2095)
                     /locus_tag="QGG16_09770"
     CDS             complement(1316..2095)
                     /locus_tag="QGG16_09770"
                     /inference="COORDINATES: protein motif:HMM:NF013200.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HJP25602.1"
                     /translation="MRILVCVKRVPAPGARINVTADGQTVDAAHLGFTTSPHEECAVE
                     EAVQLTEAHGGEVTVMTLGPAEAEEQLRYAASVGAHHFVLIPINDVDWDPQRTALALT
                     EAIAAVEETNGAFDLILFGNESADAGGFQVGVRVANHLGRPIVNGIKGIEIGGELDEG
                     VAAARREIDGGFEVYNVPMPAVLGVKEGINLPRYPTMKGRLASKKAVVDTDERIVEAG
                     GQVRLRLHRPVEQISETVILGTGPEAAPAVVDLLEELGVLS"
     gene            complement(2106..>4322)
                     /locus_tag="QGG16_09775"
     CDS             complement(2106..>4322)
                     /locus_tag="QGG16_09775"
                     /inference="COORDINATES: protein motif:HMM:NF013720.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJP25603.1"
                     /translation="RRMTSAKAWGIEAHMLTPSQVKELVPFINEDVILGGFHCPTVSV
                     VDSLETGTTMRREAIEKAGCQVFANTEVLDIETAEGAGGITTVAAVVTDKGTIEADYV
                     VVACGVWSNRIANMAGATIPLVPAVHQMADVGPMDILAETNNEIGYPVVRDMDTFCYE
                     RQSSGSMEVGSYGHRAILHHPDEIPSNAEAALSPTEMPFTPDDFDDQMETAIELMDML
                     GDAEIKYAINGLLSLTPDTMPCLGETTEVRNLWSAAAVWVKEGPGMAQVVAEWMTHGY
                     PRVIDVHGADVARFYDQERSDEHIWSRADEHFIKTYGIVHPAEQWEGRRNLEVGPYFS
                     RQQDLDATFFQARTWERPQWYGANADLVERYGLAEREVEWDNRWWSPITTGEHLNMRE
                     HCGVVDLSSFQIYELDGPGAIEYAERLAVNKVDVAVGRSIYTPWLTPDGGFHSDLTMM
                     RLGEDRMRIVTGVFDGGRDEFWTRRHMPTDGSVTFTNITRQLTTLGLWGPNAPAVLFQ
                     LTGQDLSQDGSPYGSIIDAEVAGLPVQLFRISYVGDTGWEIYTAWENGPALWDALMEA
                     GADLGIRPTGGGVYGSSGRLEKGYRLMGAELESEYNPLEAGLARPKLKAADFIGRDAY
                     HAAREAGDPEVSMCTLTVEDQTDGQGRSRHMMGGNEPILDADGGRIVDSHGRVSRATS
                     AGYGPSVGKHLLMSYLPRELAVAGTDLQVMYMNELYPVKVASTGAVFDPDDTRLKG"
BASE COUNT          698 a         1456 c         1431 g          737 t
ORIGIN      
        1 tggctgagat gatggccgtg gctgacgagg acggactcat gcctcccaag tcatcgtatt
       61 ttgagcccaa gccccgatcc ggcgtcttcg tccgccgcct cgaccgagag accacagccg
      121 gggccggtga gaactgaccg gtgatcgacg tccgtcgact ccgacacgag gcgaccaacc
      181 cgtgaccggg gcacatgcac aacgggcggt actgcagttt ccggtcgacg gttaacgccg
      241 gtgggtctcg gcgacccgga tcgggccgac gccgtgtgga tggtcaactc agtctgtggc
      301 tgagttgacc atcatttcga tgaccggccc gacgctcaac ctcggcgacg tcgaacttct
      361 tcggtgatgg ccggaatgac ctggtgcagg tcgccgatta ccgcatgccc ggcccgggtg
      421 accatgttgg cctcaccgtc ggtgttgatg gccaggatgt tcttggccgc catggcgccc
      481 acccagtgct ggatggcgcc cgagatgccg ctggcgatgt agatctccgg ggcgatccgg
      541 gtgccggtct gtccgacctg atcgctgtgg ggccgccagc cgttgttcgt gacggcacgg
      601 gaacaaccca ccacgccgcc gagctcgccg gccagttctt ctaacggagc gaacgcctcg
      661 gccgacccca cgccacggcc gccacctacc accaccggtg cggtggacag ggtgatgccc
      721 ctagtcagga cgacccgatc ggctaccacg gtgcgggcca acgcatcatc gagttcgggg
      781 acgaacgaca ccatggtgcc ggaagccggt gcctcagcgg cgaccccctc cactgagtga
      841 tgggccactg tcaccaggtg gatctcggcg gtcagggcgg cgtcctcgag tagcgaaccg
      901 ccccactgga cgcgggtcat ggtccagttc ccggagccat cgcccgtcgg gtcgacggtt
      961 cggcagttgg ccacgaacgg ctgatctagg cgggcggcca cctgggccac cacctcgttg
     1021 ccccgatcgg tgccgcaggc cagcaccgca gtggccccgg tgcctcgtac cagttggacc
     1081 accgtctcgc cccaggcctc ggggccgaag tcggtcaaca acggatgaga tgcgacatgc
     1141 acggtcgacg cgccatacgc gcctagaccg gctgctgcgg aatcggcgcc ctcgccgatg
     1201 accaccgcgg ccatctcgag accggccgcc accgccaggg ggcgcccgaa ggtgagtgcc
     1261 tccagcgagg cgtccgacag ggtgccgcga tcgtggtcgc agatgacgag caggctcatg
     1321 acagcacccc aagttcctca agcaggtcca cgaccgccgg ggcggcctcc gggccagttc
     1381 ccaagatcac cgtctcgctg atctgctcca ccgggcggtg gaggcgcaac cgcacctgcc
     1441 caccggcctc gacgatccgc tcgtcggtgt ccaccacggc cttcttggaa gccagacggc
     1501 ccttcatggt cggataccgc gggaggttga tcccctcctt gacacccaac accgccggca
     1561 taggcacgtt gtagacctca aagccgccgt cgatctcccg acgggccgcg gccacgccct
     1621 cgtccagttc cccaccaatc tcgattccct tgatgccgtt cacgatggga cgtccaaggt
     1681 ggttggccac ccgcaccccg acctggaagc caccggcgtc ggccgactcg ttcccaaaca
     1741 ggatcaggtc gaatgcaccg ttggtctcct ctaccgcggc aatggcctcg gtcagagcca
     1801 acgcggtgcg ttgcgggtcc cagtcgacgt cgttgatcgg gatcagcacg aagtggtggg
     1861 cgccgacgct ggccgcgtag cgcagctgct cctcggcctc cgccgggcca agggtcatga
     1921 cggtgacctc gcccccgtgg gcctcggtca gctggacggc ttcctctacc gcgcactcct
     1981 cgtgcgggct agtggtgaag cccagatggg cggcgtcgac ggtttgaccg tcggcggtca
     2041 cgttgatgcg tgccccggga gccggtacgc gtttaacgca gacgaggatc ctcatggtcg
     2101 tcggatcaac ccttcagtcg cgtgtcgtcc ggatcgaaca ccgccccagt ggaggccacc
     2161 ttcaccgggt acagctcgtt catgtacatg acctgtaggt cggtgccggc cacggcgagc
     2221 tcccgcggca ggtacgacat caacaggtgc tttccgaccg atgggccgta acccgccgag
     2281 gtggcccggc tgactcggcc gtggctgtcg acgatgcggc cgccgtcggc atccaggatg
     2341 ggctcgttgc cgcccatcat gtgtcgcgac cggccctggc cgtcggtctg gtcctcgacg
     2401 gtcagggtgc acatcgacac ctcgggatca ccagcctcgc gggctgcgtg gtaggcgtca
     2461 cgtccgatga agtcggcggc cttgagcttc ggtcgggcca gaccggcttc cagcgggttg
     2521 tattcgctct ccagttcggc acccatcagg cggtagccct tttcgaggcg acctgacgag
     2581 ccgtacacgc caccaccggt cgggcggatg cccaggtcgg cgccggcctc catgagcgcg
     2641 tcccaaaggg cggggccgtt ctcccacgcc gtgtaaatct cccagccggt gtcaccgacg
     2701 taggagatgc ggaatagctg gacgggtagg ccggccacct cggcatcaat gatcgagccg
     2761 tagggggagc cgtcctgact gaggtcctga ccggtcaact gaaacagcac ggccggagcg
     2821 ttggggcccc acaggccgag cgtggtgagc tgccgggtga tgttggtgaa cgtcaccgag
     2881 ccgtcggtcg gcatgtggcg acgggtccag aactcgtcgc ggccaccgtc gaacacgccg
     2941 gtcacgatcc gcatccggtc ctcaccaaga cgcatcatcg tgaggtcgga gtggaaacca
     3001 ccatcggggg tcagccacgg ggtgtagatc gaccgaccca cggccacgtc gaccttgttg
     3061 acggccagac gctcggcata ctcaatggct ccggggccgt cgagttcgta gatctggaac
     3121 gagctcaggt cgaccacacc acagtgctca cgcatgttga ggtgctctcc ggtggtgatg
     3181 gggctccacc atcggttgtc ccactcgacc tcgcgctcag ccaggccgta gcgctcgacg
     3241 aggtcggcgt tggcgccgta ccactgcgga cgctcccagg tccgggcctg gaagaaggtg
     3301 gcgtcgaggt cctgctggcg cgagaagtac gggccgacct cgaggtttcg gcgcccctcc
     3361 cactgctcgg ccgggtggac gatcccgtag gtcttgatga agtgctcgtc ggcccgggac
     3421 cagatgtgct cgtcggagcg ctcctggtcg tagaagcggg cgacgtcggc accgtggacg
     3481 tcgatcactc gggggtagcc atgggtcatc cactcggcga cgacctgggc catgcccgga
     3541 ccctccttga cccacacggc ggcggctgac cagaggttgc gcacctcggt ggtctcacct
     3601 aggcagggca tggtgtccgg tgtcagcgag agtagaccgt tgatggcgta cttgatctcg
     3661 gcgtcgccca gcatgtccat tagctcgatg gccgtctcca tctggtcgtc gaagtcgtcc
     3721 ggcgtgaacg gcatctccgt cggcgacagc gctgcctcgg cgttggacgg aatctcatcc
     3781 gggtggtgga ggatcgcccg gtggccgtaa gagccgacct ccatggaacc cgacgactgc
     3841 cgctcatagc agaaggtgtc catgtcccgg acgaccgggt agccgatctc gttgttggtc
     3901 tcggcgagga tgtccatggg gcccacgtcg gccatctggt ggacggcagg gaccagcggg
     3961 atggtggcgc cagccatgtt ggcgatgcgg ttggaccaca cgccacaagc cacgaccacg
     4021 tagtcggcct cgatggtgcc cttgtcggtc accacggccg caacggtggt gatcccgccg
     4081 gcgccttcgg cggtctcgat gtcgagcacc tcggtattcg cgaacacctg gcagccggcc
     4141 ttctcgatgg cctcacggcg catggtggta cccgtctcga gcgagtccac gaccgacacc
     4201 gtcggacagt ggaacccacc gaggatgacg tcctcgttga tgaacgggac gagttccttg
     4261 acctgggagg gggtcagcat gtgggcctcg atgccccacg ccttggccga ggtcatgcgg
     4321 cg
//
LOCUS       DASCMR010000434         2074 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002114904, whole genome shotgun sequence.
ACCESSION   DASCMR010000434 DASCMR010000000
VERSION     DASCMR010000434.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2074)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2074)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2074
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002114904"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..563
                     /locus_tag="QGG16_09780"
     CDS             <1..563
                     /locus_tag="QGG16_09780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020378358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HJP25604.1"
                     /translation="FEVDNNIWLIGDDHEVVVVDAAHDHRPIAEAVRGRRVRGVLCTH
                     GHNDHINAAVELAEATDAPIWLHPDDGMLWDVVHPDRRIDDPLRDGLTIGVGGDELTI
                     LHTPGHSPGGCCIHVPALGVVFSGDTLFNGGPGATGRSFSDQGVLVESIRSRLFVLDR
                     VTTVHTGHGDSTSIGAEVDRLDASDD"
     gene            complement(590..1954)
                     /locus_tag="QGG16_09785"
     CDS             complement(590..1954)
                     /locus_tag="QGG16_09785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrpB-like pyridoxal phosphate-dependent enzyme"
                     /protein_id="HJP25605.1"
                     /translation="MSDDYSKVLLEESEMPTQWYNVIPDLPTPPPPPLHPGTLEPIGP
                     DDLAPLFPMALIMQEVSTDSYIDIPGEVLDVYRLWRPSPLLRARRLEKALDTPAKIFL
                     KYEGVSPAGSHKPNTAVPQAFYNAQEGVKRLTTETGAGQWGSALAFATAQFGLDCEVW
                     QVRASYDQKPYRKTMMELWGATLHASPSNLTEAGRAILATDPDSPGSLGIAISEAVEQ
                     AAQSEETRYALGSVLNHVLLHQTIIGEEALLQLAKVDETPDLLVGCTGGGSNFGGLSF
                     PFLREKLAGRMDPVIRCVEPAACPSLSRGEYRYDFGDTGQLTPLVKMHTLGHTFIPDP
                     IHAGGLRYHGMAPLVSHVYDLGLVEAEAIHQTECFAAALQFARSEGIVPAPEPTHAIA
                     AAIREALRCKETGEEKVILTALCGHGHMDMAAYEKYLAGELVDYEFPEAAIAEAMENV
                     PVIN"
BASE COUNT          355 a          602 c          717 g          400 t
ORIGIN      
        1 acttcgaggt cgacaacaac atctggttga tcggtgacga ccatgaggtg gtggttgtcg
       61 acgccgccca cgaccaccga cccattgctg aagcggtccg aggtcggagg gtccggggtg
      121 tcctatgcac ccacggccac aacgaccaca tcaacgcggc cgtggagtta gccgaagcga
      181 ccgatgcccc gatctggttg caccccgacg acggaatgct gtgggacgtc gtccaccccg
      241 accgacgcat cgacgacccg ttgagagatg gcctgaccat tggagtgggt ggcgatgaac
      301 tgacgatcct gcacacgccc gggcactcgc cgggtggctg ttgcatacat gtgcccgccc
      361 tcggcgtggt gttctccgga gacacgctct tcaatggggg ccccggagcc accggcaggt
      421 cgttttcgga ccagggcgtc ctcgttgaga gcatccgttc gaggctgttc gtgctggacc
      481 gggtgaccac cgtccacacg gggcacggtg actcgacgtc gatcggggcc gaagtcgacc
      541 ggttggatgc ttctgacgac tgacctcagg gggtcgcgtc cggtaagggc tagttgatga
      601 cggggacgtt ttccatcgcc tcggcaatgg ctgcttccgg gaactcgtag tcgacgagtt
      661 ctccagcgag gtacttctcg tacgcggcca tgtccatatg gccgtgccca cacaaggcag
      721 tgaggatgac cttctcttcg ccggtttcct tgcagcgaag agcttctcgg atagcggcgg
      781 caatggcatg ggtgggctcg ggcgcgggaa cgatgccctc gctccgggcg aactgcagcg
      841 ctgccgcgaa gcactctgtt tggtggattg cctccgcctc gacgaggccg aggtcgtaga
      901 cgtgggacac caggggtgcc atgccgtggt atcggagccc tcccgcgtgg atcgggtccg
      961 ggatgaacgt gtggccgagg gtgtgcatct tgaccagtgg ggtcagctgg ccggtatcac
     1021 cgaagtcgta ccggtactcg ccgcggctga gagacgggca tgctgccggc tccacgcatc
     1081 ggatcactgg gtccatccgg ccagcgagct tctcgcggag gaacggaaat gagaggccgc
     1141 cgaaattgga gccaccgccg gtacacccga ccaggagatc aggggtctcg tcgaccttgg
     1201 ccaactgcag aagcgcctct tctccaatga tggtctggtg gagcagcacg tggttgagga
     1261 cgctcccaag ggcgtaacgg gtctcctcgc tctgtgcggc ctgctcgacg gcttcggaaa
     1321 tggcgatacc gagactcccc ggactgtcgg ggtcggttgc caggatggcg cgacctgcct
     1381 cggtcaggtt cgaaggactg gcgtggagtg tcgcgcccca cagttccatc atcgtcttgc
     1441 gatacggctt ctggtcgtag gacgcccgaa cttgccagac ttcacagtcc agcccgaact
     1501 gggccgtagc gaaggcgaga gcggagcccc actggcccgc tccagtctcg gtcgtcagtc
     1561 gctttacgcc ttcctgggcg ttgtagaacg cctgggggac agcggtgttg ggcttgtggg
     1621 agccagcggg gctgacgcct tcgtacttga ggaagatctt tgccggggtg tccagggcct
     1681 tctcgaggcg gcgagcccgc aggagtggac tcggacgcca gagtcggtag acgtcaagta
     1741 cctcgccggg aatgtcgatg tacgagtccg tggaaacctc ctgcatgatg agggccatcg
     1801 ggaagagcgg ggccaggtca tcggggccaa tcggctcgag ggtgccgggg tgtagcggcg
     1861 gcggtggcgg cgtcggtagg tccggaatga cgttgtacca ctgtgttggc atctcggatt
     1921 cttcgagcag caccttggag tagtcatcgg acatggctgt ttctcatctc tggattggag
     1981 gaaatggatc tgccgggagg ccggcacagg ccgacaatgg tttcgtcgga atgtgttgtc
     2041 aacctgtgtc gtcacaggtc tgggaaccga cgag
//
LOCUS       DASCMR010000435         2225 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002130382, whole genome shotgun sequence.
ACCESSION   DASCMR010000435 DASCMR010000000
VERSION     DASCMR010000435.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2225)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2225)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2225
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002130382"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            50..1261
                     /locus_tag="QGG16_09790"
     CDS             50..1261
                     /locus_tag="QGG16_09790"
                     /inference="COORDINATES: protein motif:HMM:NF019604.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HJP25606.1"
                     /translation="MIATGGAMSFLARAEGMGLGDVNPRIDVDNLATRLATIEQRLHR
                     STTSLLESQNVRLIEGTGSLKGPHQVVAETADGLEEIEADVVVLSTGSRPRIPDWAPV
                     DGERVLTTRDAYPPDEMPEHAIIIGSGVTGVEFVHMFASFGCDVTLVVSRQQVLPAKD
                     PEVAAALEADFLRRNVKLFKGARAQSVERDGDRVSVHCDDGRMATGSHVILAVGSIPN
                     SEGLGLDTVGIETDGGYIPIDPYCRTSVPHIYAAGDVSGKLPLSSVAQMQGRKIAEHA
                     MGVVDDRSHRVLDYDKAASAVFTEPEIADVGLAEADAFAEGRKIRVTKVPFSASPKAI
                     INDDPRGFIKIVSDPATGVVLGGSIVGRHAAELIAIVALAVTAGLTVHDIQESLFVHP
                     TLAEALADAAE"
     gene            complement(1304..>2225)
                     /locus_tag="QGG16_09795"
     CDS             complement(1304..>2225)
                     /locus_tag="QGG16_09795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HJP25607.1"
                     /translation="YLYEDGAFHYLEMNTRLQVEHPVTELVTGLDLVEQQLRIAAGEP
                     LDFGQDDVTITGHAIEVRINAEDPAGGAFLPSPGRIDALRVPDGFGIRFDGGYEAGDE
                     VSQYYDNLVGKLVVWGRSRDVAIRRTLRALADFEIRGVATTIPADIAILEHPDFSAVA
                     HSTKWVEETLDLSDVSADAGPAGTNDDVSTVRQDISVEVDGRRFAVSMWVPEAAPTVG
                     PAARTRAKRSGGGAGTLGNGRVAVPMQGTIIKVLVAVGDSVDAGDPVCVLEAMKMENN
                     VAADKAGTVTEVLVGPGDSVGSGDVVVVIE"
BASE COUNT          379 a          812 c          689 g          345 t
ORIGIN      
        1 cgtcttcggt ggcgccgccc acctgtagga cagcatcccg tccaaggcca tgatcgccac
       61 cggcggtgcc atgtcgttcc tggcccgggc cgagggaatg ggcctcggcg acgtcaaccc
      121 ccgcatcgac gtagacaacc tcgctacccg cctggccacc atcgaacagc gcctgcaccg
      181 gtccacgacc tcgctgctcg aaagccagaa cgtccgcctg atcgagggca ccggctcgct
      241 caagggcccc caccaggtgg tggccgaaac agccgacggc ctcgaggaaa tcgaagccga
      301 cgtagtcgtt ctatcgactg gcagccgtcc acgcatcccc gactgggcac ccgtcgacgg
      361 cgaacgcgtc ctcaccaccc gcgacgccta cccacccgat gagatgcccg agcacgcgat
      421 catcatcggc tccggcgtca ccggcgtgga gttcgtccac atgttcgcat cgtttggctg
      481 cgacgtcacc ctggtggtca gccgccaaca ggtcctcccg gccaaggacc ctgaagtcgc
      541 cgccgccctc gaagccgact tcctacgtcg gaacgtcaaa ctcttcaagg gggcccgggc
      601 ccagtccgtc gaacgcgacg gcgaccgggt ctcggtgcac tgcgacgacg gccgaatggc
      661 caccggcagc cacgtgatcc tggccgtcgg ctccatcccc aacagtgaag gcctgggcct
      721 cgacactgtc ggcattgaaa cggacggcgg ctacataccc atcgacccct actgccgcac
      781 cagtgtcccg cacatctacg ccgccggaga cgtttccggc aagctcccgc tctcgtcggt
      841 ggcccagatg cagggccgca agatcgccga gcacgccatg ggcgtcgtcg acgaccgatc
      901 ccatcgggtc ctggactacg acaaggccgc ctcagcggta ttcaccgaac cggaaatcgc
      961 cgacgtgggc ctcgccgagg ctgacgcctt cgccgaaggc cgcaagatcc gggtcaccaa
     1021 ggtgccgttc tcggcatcac ccaaggcaat catcaacgac gacccgcggg gcttcatcaa
     1081 aatcgtgtcc gacccggcca ccggggtggt actgggtggg tccattgttg ggcgccacgc
     1141 cgctgaactc atcgcgatcg tggccctggc cgtcaccgcc gggctgaccg tgcacgacat
     1201 ccaagagagc ctgttcgtgc accccacgtt ggccgaggcg ctggccgacg ccgccgagta
     1261 ggcgccatcc ggccgggccg gacagcgacc cgttcgacgg gtcctattcg atcaccacca
     1321 ccacgtcgcc ggaacccacc gagtcacccg gcccgaccag gacctcggtc actgtgccgg
     1381 ccttgtcggc cgccacgttg ttctccatct tcatggcctc caacacgcag accggatcgc
     1441 cggcgtccac ggagtcgccc acagcgacca gcaccttgat gatggtgccc tgcatcggaa
     1501 ctgccacccg accgtttccc agagtgccgg cgccgcctcc tgaccgcttg gcccgggtac
     1561 gggcggcagg cccgacagtc ggcgcggctt ccggcaccca catgctcacc gcgaagcggc
     1621 gcccgtcgac ctcgacggag atgtcctggc gaaccgtcga cacgtcgtcg ttggtgccgg
     1681 ccggaccggc atcagctgag acgtcggaca ggtccagcgt ctcttccacc cacttggtgg
     1741 agtgggcgac cgcggagaag tcgggatgtt ccaagatggc gatgtcggcc gggatggtgg
     1801 tggccacgcc ccggatctcg aagtcggcca gggcccgcag ggtccggcgg atggccacat
     1861 cgcggctgcg accccagacc acgagcttgc cgaccaggtt gtcgtagtac tggctgacct
     1921 cgtcgcccgc ttcgtagccg ccgtcgaacc ggatgccgaa gccgtcgggc acccggagcg
     1981 cgtcgatccg acccggactg ggcaggaacg ccccaccggc cgggtcttca gcgttgatgc
     2041 gcacctcgat ggcgtgaccg gtgatggtga cgtcgtcctg gccgaagtcc agtggttcgc
     2101 ccgcggcgat ccggagctgt tgttcgacga ggtcaagccc ggtcaccaac tcggtcaccg
     2161 gatgctcgac ctggagtcga gtgttcattt cgaggtagtg gaaggcccca tcctcgtaga
     2221 ggtac
//
LOCUS       DASCMR010000436         4601 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002135903, whole genome shotgun sequence.
ACCESSION   DASCMR010000436 DASCMR010000000
VERSION     DASCMR010000436.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4601)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4601)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4601
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002135903"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1107)
                     /locus_tag="QGG16_09800"
     CDS             complement(<1..1107)
                     /locus_tag="QGG16_09800"
                     /EC_number="1.1.1.108"
                     /inference="COORDINATES: protein motif:HMM:NF005471.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-carnitine dehydrogenase"
                     /protein_id="HJP25608.1"
                     /translation="MDTVAGGRAVGLVGTGVIGAGWAVRALARGLDVVAWDPASGAED
                     RLRAAVQRAWPSATKLGLFPGADPTRLTWVDTAEEVAGRVDWIQESAPENETVKRPLI
                     QALAAHSGPEVVIASSSSGLLPTNLQEGCKHPERVLIGHPFNPVYLLPLVEVVAGEQT
                     SEAAMDAAVAHYDDLVMYPLVVRNEIEGYLSDRLQEALWREVLHLVNDGVATTRELDD
                     AINYGPGLRWAGMGTNLTFHLAGGEQGMRHMLRQFGPALKLPWTKLEAPELTDDLIEA
                     MADGCEEQAGGRSIAELERLRDDYVISVMRSLRPLDLGAGRLIAEREARIHEAGSGSR
                     WTAGDDTANHLVAAPLALYETVVEPDWVDYNGHMS"
     gene            complement(1118..2011)
                     /locus_tag="QGG16_09805"
     CDS             complement(1118..2011)
                     /locus_tag="QGG16_09805"
                     /inference="COORDINATES: protein motif:HMM:NF017652.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /protein_id="HJP25609.1"
                     /translation="MTRSMNRDVIITCAVTGSGDTTGRSEHVPITPEQVASSALDAAS
                     AGAAIVHCHVRDLDTGKGTRTVELYREVVDRIREKNTDVVVNLTAGMGGDLNVGPDDD
                     PMAWESGTDLVGGLERLAHVEAIRPDICSMDCGSLNFGDHNEVYVSTPAMLRIMAERV
                     RELGVRPELEVFDTGNLWFAETMIAEGLIDAPYWLQLCLSIPYGTPLDVGILQAMVNR
                     LPAEAEFTSFGLGAMQMPMVAQSVMLGGHVRVGLEDNLYLERGVLATNAQLVEKAIRI
                     VELMGARVQTPADARQTLNLG"
     gene            2219..3430
                     /locus_tag="QGG16_09810"
     CDS             2219..3430
                     /locus_tag="QGG16_09810"
                     /inference="COORDINATES: protein motif:HMM:NF012607.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HJP25610.1"
                     /translation="MKILFADALPEAYIDLLRDRGDECIVSPELGADDIPDAIEGIDV
                     LVVRSTKVTATTTSRSDRLGLIVRSGAGTNTIDCQAAADAGIYVCNVPGTNSVAVAEL
                     TLGLLLAIDRHIPSAATDLKHGTWNKKEYSKADGLMGKTFGVIGVGEIGLAVAERARS
                     FGMTVVAERKADRRPDVEARIRSIGIRLVEDLDELVTESDIVSIHVPGGAATENLVDK
                     RFLDLMKPGAILINTSRGEVVDEDALIAAMDSRGIRAGLDVYRDEPAGGEGEFTSELA
                     VHPNVVGTHHIGASTQQAQDATSAGTVDVIEAYRAGEPVNCVNVAGTRMGSATITIRH
                     FDRVGVLAAALQVLRRADINVQTMENKVFQGSNAAMAIIDVVGDVTEDVARELTSLDN
                     VIQVQTTAREQ"
     gene            3433..>4601
                     /locus_tag="QGG16_09815"
     CDS             3433..>4601
                     /locus_tag="QGG16_09815"
                     /inference="COORDINATES: protein motif:HMM:NF018004.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1015 domain-containing protein"
                     /protein_id="HJP25611.1"
                     /translation="MLRPFPGLTVEPAWADRVTTGPYDAYSPSERVAIAEANPYSFLN
                     VTRSQEDVPVEWRDDVDWLIGQCAESMQRIYDAGAYAEHDEPSLFLYRLETGDHVQTG
                     VMGLVPVTEPGDRRVLRHEAVRPGRADLLTRHLLELGMSSSPISLTYRTDAVLDAAII
                     AGCATEPVLEADGDGIHQTIWALSGKAADALVAAMGDRPLYVTDGHHRLAAAVEARHR
                     NPDIGDDHPLQWTQAVLFPDAEMQVLAAHRRVGDRAGRSTDDLVEALTAVGPLVPCAD
                     VSEARPDGAGAIGVYVGGRWFSMDLPAASGNRAVDQLDVSRLQDGILAPVMGITDPGS
                     DPMIDYVPEPVGIGALVARCDADGRVGFVLHATSVAEMMAVADEDGLMPPKSSYF"
BASE COUNT          773 a         1576 c         1493 g          759 t
ORIGIN      
        1 ggacatgtgg ccgttgtagt ccacccagtc gggctcgacg accgtttcgt acagggccag
       61 cggggcggcc accaaatgat tcgccgtgtc gtcgccggcg gtccacctcg aacccgaacc
      121 ggcttcgtgg atgcgggcct cgcgctcggc gatcaaccgg ccggcaccca ggtccagcgg
      181 ccgcagcgac cgcatcaccg agatgacgta gtcgtcccgg aggcgttcca gttcggcgat
      241 ggaacgcccc ccggcctgtt cctcgcaccc gtcggccatg gcctcgatga ggtcgtcggt
      301 tagctcgggc gcctcaagct tcgtccatgg cagcttcagg gccggaccga actgacgaag
      361 catgtggcgc atgccctgct cgccgcccgc caggtgaaag gtcaggttgg tgcccatacc
      421 ggcccaccgg agccccggcc cgtagttgat ggcgtcgtcc agctcgcggg tggtggccac
      481 cccgtcgttc accagatgga gaacctcccg ccacagggcc tcctggagtc gatccgagag
      541 gtagccctcg atctcgtttc gcaccaccag cggatacatc accaggtcgt cgtaatgggc
      601 taccgcggcg tccattgccg cctcagaagt ctgctcgccg gccacaacct cgactagggg
      661 cagcaggtac accgggttaa aggggtgtcc gatcaagacc cgctccggat gcttgcaacc
      721 ctcctggaga ttggtgggaa ggaggcccga ggagctggaa gcgatgacta cctccgggcc
      781 ggaatgggcg gccagagcct ggatcagcgg ccgcttgacc gtctcgttct ccggggcgct
      841 ctcctgaatc caatcgaccc gaccggccac ctcctcagcg gtgtcaaccc atgtcaggcg
      901 ggtcgggtca gctcccggga agaggccgag tttcgtggcc gacggccagg cccgctgcac
      961 ggcagcacga agccggtcct cggcgcccga cgccggatcc caggccacca cgtcgagtcc
     1021 ccgggccaac gcccggacgg cccaaccagc gccgatcacc ccggtgccca ccaggccgac
     1081 ggctcgcccc ccggcgaccg tgtccatcga atccgcccta gccgaggttt agggtctgtc
     1141 gggcatcagc cggggtctgg acccgggcac ccatcagttc cacgatccgg atggccttct
     1201 caaccagctg agcgttggtg gccagcaccc cgcgctccag gtagaggttg tcctccagac
     1261 cgacccgcac gtggccaccc agcatcaccg actgggccac cattggcatc tgcatggctc
     1321 ccagaccgaa tgacgtgaac tcggcctcag cgggcagtcg gttcaccatg gcctgaagga
     1381 tcccgacgtc cagcggtgtc ccgtagggga tcgacaggca gagctggagc cagtacgggg
     1441 cgtcgatcag gccctcggcg atcatcgtct cggcgaacca caggttgccg gtgtcgaaga
     1501 cctccagctc gggccgcacg cctagctctc ggacccgctc ggccatgatg cgcaacatcg
     1561 ccggggtgga cacgtagacc tcgttgtggt caccgaagtt cagtgaccca cagtccatcg
     1621 agcagatgtc ggggcggatg gcctccacgt gggccaggcg ttcgaggccg cctaccaggt
     1681 cggtgccgga ctcccaggcc atcggatcgt cgtcagggcc gacattgaga tcaccgccca
     1741 tgcccgccgt gaggttcacc accacgtcgg tgttcttttc gcggatgcgg tcgaccacct
     1801 cccggtagag ctccacggtg cgggtgccct tcccggtatc gaggtcgcgc acgtggcagt
     1861 ggacaatggc cgccccagcc gaagcggcgt ccagcgcgga ggacgcgacc tgttccgggg
     1921 tgatcggcac atgttcactg cgcccagtgg tgtctcctga gccggtcacg gcgcaggtga
     1981 tgatgacatc acggttcatg gatcgggtca cgaggccccc ctgtcgtctg gcccattgtt
     2041 ccgagaacgg ggcttgcgta ggcttgtccc cggtccggat cccgcctccc cttcaagggc
     2101 aggctcttca agagcaggcc cttcaggaga aggttggacc ggtccgtccc agaatccgcg
     2161 caggctaccc cgccgtccgc accgtaggtg ccggcgtcgg cgtgtcgaag gagcaaccat
     2221 gaagatcctg ttcgcagacg ctctccccga ggcatacatc gacctcctca gggatcgggg
     2281 cgacgagtgc atcgtctctc ccgagttggg tgccgacgac attcccgatg ccatcgaggg
     2341 catcgacgtg ctcgtcgtcc gcagcaccaa ggtcacagcg acgacgacca gccgatcaga
     2401 ccggctaggc ctgatcgtcc ggtcgggtgc cgggaccaac accatcgact gccaggcggc
     2461 agccgacgcc gggatctacg tgtgcaacgt gccgggcacc aactcggtcg ccgtggccga
     2521 gttgaccctc ggcctactgc tggccatcga ccgtcacatc ccatcggcag cgaccgacct
     2581 caagcacggc acgtggaaca aaaaggagta ctcgaaggcc gacggtctca tgggcaagac
     2641 cttcggtgtc atcggtgtgg gcgagatcgg gttggccgtc gccgagcggg cccgctcgtt
     2701 cggcatgacc gtggtcgccg agcgcaaggc cgaccgtcga cccgacgtcg aggcccggat
     2761 ccgttccatc ggtatccgcc tggtcgaaga cctcgatgag ctggtgaccg agtccgacat
     2821 cgtctcgatc cacgtgcctg gtggcgcagc aaccgagaac ctggtcgaca aacgattcct
     2881 ggacctcatg aagccgggcg ccatcctgat caacaccagc cgtggtgagg tagtcgacga
     2941 ggatgcgctc atcgctgcca tggactccag ggggatccgg gccggactag acgtgtaccg
     3001 cgacgagccg gccggcggcg aaggtgagtt cacctccgag ctggccgtcc accccaacgt
     3061 ggtcggcacc catcacattg gggcgtcgac ccagcaggcc caggacgcca cctcggcggg
     3121 caccgtcgac gtgatcgagg cctaccgggc cggtgagccg gtgaactgcg tgaacgtggc
     3181 cgggacccgc atgggttccg ccaccatcac catccgacac ttcgaccggg tgggcgtgct
     3241 ggccgccgcg ctgcaggttc tgcgacgggc cgacatcaac gtccagacca tggagaacaa
     3301 ggtcttccag ggttccaacg ccgccatggc catcatcgac gtagtcggtg acgtcaccga
     3361 ggacgtcgcc cgagaactaa ccagcctgga caacgtgatc caggtccaga caactgctcg
     3421 cgagcagtga gtgtgctccg cccctttccg gggctgaccg tcgaaccggc gtgggctgac
     3481 agggtcacca ccggtcctta tgacgcctac tccccgtccg agcgcgtggc cattgccgag
     3541 gcgaacccat acagcttcct gaacgtcacc cgatcccagg aggatgtgcc ggtcgagtgg
     3601 cgcgacgacg ttgactggtt gatcggccag tgtgccgaat ccatgcagcg catctatgac
     3661 gccggtgcct acgccgagca cgacgagccg tcgctgttcc tgtaccgcct ggagacaggc
     3721 gaccacgtcc agaccggcgt gatgggcttg gtgccggtaa ccgagccggg cgaccgccgg
     3781 gtgttgcgcc acgaggcggt acgtcccggg agggccgacc tgctgaccag gcacctgttg
     3841 gagttgggca tgtcgtccag ccccatctcg ctcacctatc ggaccgatgc ggtgctagac
     3901 gcggcgatca tcgccggttg cgccactgaa ccagtgctgg aagccgacgg tgacggcatc
     3961 catcagacga tctgggcgct gtccggtaag gctgccgatg ccctcgtagc cgccatgggt
     4021 gaccgaccgc tgtacgtcac cgacggccac caccgactgg cggccgccgt ggaggcccga
     4081 catcggaatc ccgatatcgg tgacgaccat ccgctgcagt ggactcaggc cgtcctgttc
     4141 cctgatgccg agatgcaggt tctggctgcc caccgccggg tcggtgatcg tgccggccgc
     4201 tcaaccgacg acctcgtcga ggccctgacg gccgtcggcc ccctcgtacc gtgtgccgac
     4261 gtctccgagg cccggcctga tggcgctggt gcgattgggg tgtacgtggg tggccgctgg
     4321 ttctccatgg acctgccggc cgcgtcgggt aaccgggccg tcgaccagtt ggacgtgtcc
     4381 cggcttcagg acgggatcct ggcacccgtg atgggcatca ccgatccggg gagtgacccg
     4441 atgatcgact acgtgcccga gccggtgggc atcggcgcac tggtcgcacg ctgcgacgcc
     4501 gatggccgcg tcggcttcgt cctgcatgcc acgtcggtgg ctgaaatgat ggccgtggct
     4561 gacgaggacg gactcatgcc tcccaagtca tcgtattttg a
//
LOCUS       DASCMR010000437         4560 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002138131, whole genome shotgun sequence.
ACCESSION   DASCMR010000437 DASCMR010000000
VERSION     DASCMR010000437.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4560)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4560)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4560
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002138131"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..266
                     /locus_tag="QGG16_09820"
     CDS             <1..266
                     /locus_tag="QGG16_09820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25612.1"
                     /translation="SRVDLTGLAALTADGMISGGMIPKVQACVDAVEAGVGSAHMVDG
                     RIPHVVLLELFTDLGIGTMVLPDGGVAADGHGVGVPDDGVDGS"
     gene            263..1522
                     /locus_tag="QGG16_09825"
     CDS             263..1522
                     /locus_tag="QGG16_09825"
                     /EC_number="2.6.1.11"
                     /inference="COORDINATES: protein motif:HMM:NF002874.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006525 - arginine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine transaminase"
                     /protein_id="HJP25613.1"
                     /translation="MTATPTERWSDVLMGNYGVPPVTFVRGSGTELFDDAGNRYLDFL
                     CGLAVTGLGHAHPRVAAALADQASTLLHVSNLFITEPQLEVAERLDRLIRSGTGSEVD
                     PAGGSGRILFQNSGAEANEAALKLARKFHGRGRHGVVAAFRSFHGRTMATLAATGQPE
                     KHEPFQPIPEGFRHAAWNDLAAVEAALAPEVGAILLEPLQGEGGVNPADMTFLQGVRR
                     LCDERGMLLIIDEVQTGLGRTGEWFGFQHAGIAPDVVTMAKGLGNGVPIGAVWATADV
                     AAAFGPGDHGSTFAGQPLAAAGAREVLRIMEEMDAPRKARERGAELTVLLEAIPGVSS
                     VRGLGLLLGVELDAAALAGRTAGEVARACLAAGLIVNGVTPTALRLAPPMTISSDELV
                     EGVGILASVLAEGSASDDGTTESGGHS"
     gene            1522..2436
                     /gene="argF"
                     /locus_tag="QGG16_09830"
     CDS             1522..2436
                     /gene="argF"
                     /locus_tag="QGG16_09830"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: protein motif:HMM:TIGR00658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HJP25614.1"
                     /translation="MRHLLEIDDLSVEELHRVLALAADPTPPQVLAGKGMALVFEKPS
                     ARTRNSMEMAVFQLGGHPVHIQAAEVGMDVRESVEDVTRTLASYHACIGARVFDHVTV
                     ERMAGQDVVPVVNMLSDAAHPLQALADVLTLTDELGGGSSEALAGRSIAYVGDGNNVF
                     RSLALACGMLGIEVRFAGPPGYRLTAVDRDRLAAAGVLFTETERVAEAVAGVDAVYTD
                     VWTSMGQEAESARRHKDFEAFRIDENLMEVAGPQALFLHCLPAHRGEEVTNGVVDGPA
                     SRVWPQAANRMHAARGLLAYLLGDGGTQ"
     gene            2433..2900
                     /gene="argR"
                     /locus_tag="QGG16_09835"
     CDS             2433..2900
                     /gene="argR"
                     /locus_tag="QGG16_09835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020376857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006525 - arginine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine repressor"
                     /protein_id="HJP25615.1"
                     /translation="MSKHQRQHRVARLLGDHPVSSQEQLVGLLAGEGIASTQATVSRD
                     LDDLGAIKVRVPGGDSVYAIPEHPADRVVPADQLRRVLGEWVVDVFSSGNLVVLRTPP
                     GSAHVVASALDRTGLEGSIGTVAGDDTLMVVAAEGITGAELADRLRELAGLQA"
     gene            2979..4211
                     /locus_tag="QGG16_09840"
     CDS             2979..4211
                     /locus_tag="QGG16_09840"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: protein motif:HMM:NF001770.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HJP25616.1"
                     /translation="MSSNRTGVDKVVLAYSGGLDTSIILRWLEEEYDCEVVTFTADLG
                     QGEELEPARTKAEAMGVSEIYIEDLREEFVRDFVFPMFRANALYEGEYLLGTSIARPL
                     IAKRLVEIADATGADAISHGATGKGNDQVRFELGAYALRPDIRVIAPWREWDLGSRQS
                     LLDYAEKHDIPVEMKRGTKSPFSMDANLLHISYEGGPLEDPWNEPPSEMWRWSVSPEM
                     APNEATYLDLTYEGGDVVALDGVAMSPATVLVKLNQVGGANGIGRTDIVENRFVGMKS
                     RGAYETPGGTIMLKAHRAIESITLDRGMAHLKDELMPRYAELVYDGFWFSPEREMLQV
                     AIDHSQAFVNGRVRLRLYKGNIEVVGRESADTLFDEAIATFEEDEGAYDQADAEGFIK
                     LNALRLRTVARRAARTGG"
     gene            4217..>4560
                     /locus_tag="QGG16_09845"
     CDS             4217..>4560
                     /locus_tag="QGG16_09845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lyase family protein"
                     /protein_id="HJP25617.1"
                     /translation="MATLWHGRFEGGPSEALQALNNSLAFDRRMFREDVDGSRAHVRM
                     LARVGLMSATDADSVLEALDTTEAELSDGSFTFVVSDEDIHTAVERRVTELAGEAGAR
                     LHTGRSRNDQVAT"
BASE COUNT          747 a         1405 c         1646 g          762 t
ORIGIN      
        1 tttctcgagt cgacctcacc ggtctggctg ccttgaccgc ggacggcatg atcagcgggg
       61 gaatgatccc caaggtgcag gcgtgcgtgg acgccgtgga agccggtgtg ggctcggccc
      121 acatggttga cggtcggatc ccccatgtgg tgctgcttga actcttcacc gacctgggaa
      181 tcggcaccat ggtcctgccg gatggcgggg tggcggccga cggtcatggc gtgggcgtcc
      241 ctgatgacgg ggtggacgga tcatgaccgc cactcccact gagcggtggt ctgacgtgct
      301 catgggcaac tacggcgtcc caccggtcac cttcgtacgg ggttcgggca ccgaattgtt
      361 cgacgatgcc ggcaaccggt acctcgactt cctgtgtggg ctggcggtga ccggtctagg
      421 ccatgcccat ccccgggtgg ccgccgctct ggctgatcag gcctcgacgc tgctgcacgt
      481 gtccaacctc ttcatcaccg aaccccagtt ggaggtagcc gagcggctcg accggttgat
      541 ccggtcaggt actggttcag aagttgatcc agccggtggg tccggtcgga tcctgttcca
      601 gaactcgggt gccgaggcca acgaggccgc cctgaagctg gcccggaagt tccacggtcg
      661 gggacgtcac ggtgtggtag ctgccttccg gtcgttccac ggccggacga tggccacctt
      721 ggcggccacc ggccagcccg agaagcatga gcccttccag ccgatccccg aggggttccg
      781 acacgccgcg tggaacgacc tggcggccgt cgaggccgcc ctggcgcctg aggtgggggc
      841 catcctgctt gagccgctgc agggcgaagg cggggtcaat ccggccgata tgactttcct
      901 gcagggcgtc cggcggctgt gtgacgagcg ggggatgctg ctgatcattg acgaggtcca
      961 gacaggcctc ggtcgtacgg gcgaatggtt cggcttccaa catgcgggca tcgcccccga
     1021 cgtggtgacc atggccaagg gactgggcaa cggggtgccg atcggcgccg tgtgggccac
     1081 cgccgacgtg gcggccgcct tcggaccggg tgaccacggg tcgaccttcg ccggccagcc
     1141 cctggctgcc gccggtgcac gcgaggtcct ccggatcatg gaggaaatgg acgccccccg
     1201 gaaggcccgc gagcggggtg cggaactcac tgtccttctc gaggcgatcc ccggagtgtc
     1261 atcggtccgg ggcctcggcc tgctgctggg tgtcgaactg gatgcggcgg ccctcgcggg
     1321 acgaacggcc ggcgaggtgg cccgcgcatg cctggccgca gggttaatcg tcaacggggt
     1381 gactccgacg gcgttgcggc tggccccgcc gatgaccatc tcaagcgatg aactggtcga
     1441 gggcgtgggg atcttggcca gtgtgttggc tgagggctcc gcctccgacg atgggaccac
     1501 tgaatccgga gggcattcgt gatgcggcac ctgctggaaa tcgacgacct gagcgtggag
     1561 gagctccatc gggttctggc ccttgctgcc gatccgactc caccgcaggt gttagctggg
     1621 aaaggcatgg cgctggtgtt tgagaagccg tcggcccgga cccggaactc catggagatg
     1681 gctgtcttcc aactgggtgg ccaccccgtc cacattcagg ctgccgaggt ggggatggat
     1741 gtgcgggagt cggtggagga cgtaacccgg actctggctt cgtaccacgc ctgcatcggt
     1801 gcccgggtat tcgaccacgt gaccgtcgag cgaatggctg gccaggacgt ggtcccagtg
     1861 gtcaacatgt tgtccgacgc cgcccatccg ctccaggcgt tggctgacgt cctgaccctg
     1921 accgacgaac tcggtggggg atcctcggag gcgttggccg ggcggtccat tgcctacgtg
     1981 ggtgacggca acaacgtctt ccggtcgctg gccctggcct gcgggatgct gggcatcgag
     2041 gtccggttcg ctggccctcc gggctatcgg ttgacagcgg tggaccggga ccggttggcg
     2101 gcggccggcg ttttgttcac cgagaccgag cgggttgccg aggcggtggc cggcgtggac
     2161 gctgtctaca ccgacgtgtg gacgtcgatg gggcaggagg ctgagtcggc ccgccgtcac
     2221 aaggacttcg aggccttccg gatcgacgag aacctgatgg aggtcgcagg cccgcaggcc
     2281 ctcttcctgc actgcctccc agcccatcgg ggcgaggagg tcaccaacgg cgtggtagac
     2341 ggtccggcca gccgggtctg gccccaggcg gccaaccgga tgcacgctgc ccggggtctg
     2401 ctggcctacc tcctgggcga cgggggtacg caatgagcaa gcaccagcgg cagcaccggg
     2461 tggcccggct gctgggcgac catccggtca gcagccagga gcaactggtc gggctcctgg
     2521 ccggcgaggg catcgcctcg acccaggcca cggtgtcgcg cgacctcgac gatctcgggg
     2581 ccatcaaggt gcgagtgcct ggtggtgaca gcgtgtacgc catacccgag catccggccg
     2641 accgggtggt accggccgat cagctacggc gagtactcgg cgaatgggtg gtcgacgtgt
     2701 tctcgtcggg caacctcgtg gttcttcgga cgccgcccgg ctcggctcat gtggtggctt
     2761 cagcgctcga ccggaccggt ctcgaggggt ccatcggcac ggtggccggt gacgacacgc
     2821 tgatggtggt cgccgcagag ggcataaccg gagcggagtt ggccgaccgg ttgcgggaac
     2881 tggctggcct ccaggcctga cccggccgac gccagtgagc acgaagatca gagacaagta
     2941 caagagacaa gaatgaaaga cggaagcgag aaacgaacgt gagcagcaac aggacgggcg
     3001 tcgacaaggt cgtgctggcc tattcaggcg gcctggacac ctcgatcatc ctccgatggt
     3061 tggaggagga gtacgactgc gaggtcgtga ccttcaccgc tgacctgggt cagggcgagg
     3121 aactcgaacc ggcacggacc aaggccgagg ctatgggtgt gtccgagatc tatatcgagg
     3181 acctccggga ggagttcgtc cgggacttcg tgttcccgat gttccgggcc aacgccctgt
     3241 acgagggcga gtacctactg ggcacgtcga tcgcccggcc actgatcgcc aagaggctgg
     3301 tcgagatcgc cgacgcgacc ggagccgatg ccatcagtca cggagccaca ggcaagggca
     3361 acgaccaggt ccggttcgaa ctgggggcct acgccctgcg gcccgacatc cgggtcatcg
     3421 ccccgtggcg ggagtgggac ctcgggtccc ggcagagctt gctggactac gccgagaagc
     3481 acgacatccc ggtcgagatg aagcggggga ccaagtcgcc cttctccatg gacgccaacc
     3541 tgctccacat ctcgtacgag ggcggcccgc tggaggatcc gtggaacgag ccgcccagtg
     3601 agatgtggcg gtggtcggtc agcccggaga tggcgcccaa cgaagccacc tacctagacc
     3661 tgacctacga gggtggtgac gtggtggccc tcgatggtgt cgccatgtcg ccggccacgg
     3721 tgttggtcaa actgaaccag gtcggcggcg ccaacggcat cggccggacc gacattgtcg
     3781 agaaccggtt cgtgggaatg aagtcaaggg gtgcctatga gacgcctggc ggcacgatca
     3841 tgctcaaggc ccatcgggcc atcgagtcga tcaccctgga ccgggggatg gcccacctca
     3901 aggacgagct aatgccccgc tatgcggagc tggtctacga cggattctgg ttcagtcctg
     3961 aacgggagat gctccaggtg gcgatcgacc acagccaggc cttcgtgaac ggccgggtga
     4021 ggctgcggct ctacaagggc aacatcgagg tggtgggccg cgagtcggct gacacgctgt
     4081 tcgacgaggc catcgccacg ttcgaggagg atgagggtgc ctacgatcag gccgatgctg
     4141 agggcttcat caagttgaac gccctgcggt tgcggacggt ggcccggcgg gctgcccgga
     4201 cggggggctg agcggcgtgg caaccctgtg gcacggtcgt ttcgaaggcg ggcccagcga
     4261 ggctctgcag gctttgaaca acagcctggc cttcgaccgg cggatgttcc gtgaggacgt
     4321 ggacggttcg cgggcccacg tccggatgct ggcccgggtg gggctgatgt cggcgactga
     4381 tgctgattcg gtgctcgagg cgttggacac caccgaggcc gagctatccg acggatcgtt
     4441 caccttcgtg gtgtccgacg aggacatcca caccgcggtc gaacggcggg tcaccgaact
     4501 ggctggagag gcgggggccc gactccacac tggtcggagc cgaaacgacc aggtggccac
//
LOCUS       DASCMR010000438         4057 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002148123, whole genome shotgun sequence.
ACCESSION   DASCMR010000438 DASCMR010000000
VERSION     DASCMR010000438.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4057)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4057)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4057
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002148123"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            187..573
                     /locus_tag="QGG16_09850"
     CDS             187..573
                     /locus_tag="QGG16_09850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25618.1"
                     /translation="MTRPKMTEAEKSEVAGVREYLKALEQNAPRRGRKRTPESVARQI
                     AAVEAQMAEATVTKRLGLIQQRIDLETEREALAAAETVDMTALEAEFVQHAAAYGGRR
                     GISYGAWREIGVSSDTLKSAGIRRSS"
     gene            complement(630..1292)
                     /gene="purQ"
                     /locus_tag="QGG16_09855"
     CDS             complement(630..1292)
                     /gene="purQ"
                     /locus_tag="QGG16_09855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HJP25619.1"
                     /translation="MATAVGVVVFPGTNCEMDAVTAVEKLGGEGRLLWHGDEDLTGID
                     AVIVPGGFAHGDYLRPGAIARFSPMMGAIARFAADGGSVVGICNGFQVLTEAGLLPGA
                     LQKNSGLKFLCQPTVLRVESSDSSLTRRAEVGSELLVPINHFEGNYTCDAETLARLRD
                     EDRIVLRYVDNPNGSVDDIAGVCNEGRNVVGLMPHPERACDELLGSADGAVLVSSLLE
                     AA"
     gene            complement(1292..1567)
                     /gene="purS"
                     /locus_tag="QGG16_09860"
     CDS             complement(1292..1567)
                     /gene="purS"
                     /locus_tag="QGG16_09860"
                     /inference="COORDINATES: protein motif:HMM:TIGR00302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HJP25620.1"
                     /translation="MKFDVMVDVRLRGGIADPAGATIERALPALGYDGVADVTVGKTV
                     RFAIEATDEAEATRRSEDLCASFLTNPVIEDATVMVTPAGGPTGDDA"
     gene            complement(1605..2528)
                     /locus_tag="QGG16_09865"
     CDS             complement(1605..2528)
                     /locus_tag="QGG16_09865"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HJP25621.1"
                     /translation="MSPQIPLPHLHSGKVRDVYDAGDDRLLMVTSDRISAFDVVMAEP
                     IANKGRVLTAMTAFWFEQFAGLVDGHLISTDTADLDQILSVGQPDGAPPEVLAELAGR
                     TMLCHRAEMLPIECIVRGYITGSAWKEYRASGTMHGTLMPDDLLEASRLPEPVFTPST
                     KADEGHDVNISYAESVDLVGTEVAEAAREASITCYLRGAEWAAERGLIIADTKFEFGM
                     VDGRLVLADEVLTPDSSRFWSAEAWKPGATPPSFDKQPVRDHLDGLDWDKQPPPPLLP
                     DEVISATSSRYVEAYERITGRSFTDWPGVGS"
     gene            complement(2543..3958)
                     /gene="purB"
                     /locus_tag="QGG16_09870"
     CDS             complement(2543..3958)
                     /gene="purB"
                     /locus_tag="QGG16_09870"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018555222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004018 - N6-(1,2-dicarboxyethyl)AMP
                     AMP-lyase (fumarate-forming) activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HJP25622.1"
                     /translation="MENVLASRYASRPMVDLWTPEAKVVMERELWIAVLEAQQELGVA
                     IGDTVVDDHRAVVDQVDLDSIRNRERVTRHDVKARIEEFCALAGHEHIHKGMTSRDLT
                     ENVEQLQVRRSLEVVRDRMVAALARLARLAAEHDGLVMVGRSHNVAAQATTLGKRFAT
                     AAEELLVSLRRVTDLLSGYPLRGLKGPVGTQQDQLDLFDGDASKLDHLESLVAGHLGF
                     DRVLDSVGQVYPRSLDFDVVSALVQASGGPANLARTVRLMAGNELATEGFRPGQVGSS
                     AMPHKMNARSCERVGGLAVVLRGHLAMVGGLVGDQWNEGDVSCSVVRRIALPDAFLAA
                     DGLFQTFLTVLDEFGAYPAVVERELRQYLPFLATTRVLVAAVQAGMGREEAHDVIKAH
                     AVGSALARREEGVSETDLLDRLAADDRLPLDRAALEALLDDPSAFVGNASAQVAVVIE
                     RVAEVVAAHPHAAAYDPEPIL"
BASE COUNT          791 a         1351 c         1258 g          657 t
ORIGIN      
        1 gtttttatag taatagagcg tgttctatgc agtaaaagaa cgatgttgat tctcagaaca
       61 aactcggatt attttgcggt aatactggat tcttcacagt ccaactcggt accggcccat
      121 tcgccacagg atgggtcaac gcaatacgag cctgatggat cgacggacaa gaaagaggtg
      181 gtggtggtga cacgccccaa gatgaccgaa gctgagaagt ccgaggtggc tggggtacgc
      241 gagtacctca aggccctgga acaaaatgct ccccgtcggg gacgcaagcg gaccccggag
      301 agcgtggccc gacagatcgc tgccgtggag gctcagatgg ccgaggccac cgtcaccaaa
      361 cgcctgggcc tgatccagca gcgcatcgac ctcgagaccg agcgggaagc gctagccgcc
      421 gccgaaaccg tcgacatgac ggcgctcgaa gccgagttcg tgcagcacgc cgcggcctat
      481 ggaggtcgcc ggggtatctc ctacggcgcc tggcgcgaga tcggagtctc gtcggacacc
      541 cttaagtcag ccggtatccg acgcagtagc tgaaaggccg gcaactcaga gaccggcagt
      601 tgagcagcgg ggcgctgctc aataggtttt caggcggctt caagcagcga actgaccagc
      661 accgcaccgt ccgcgctgcc cagcagttcg tcacaggccc gctccgggtg gggcatgagc
      721 ccgaccacat tgcgaccctc gttgcacacg ccggcaatgt cgtccaccga cccgttggga
      781 ttatccacgt aacgaaggac gatccgatcc tcgtctcgca atcgggccaa tgtctcggcg
      841 tcacacgtgt aattaccctc aaaatggttg atgggcacca acaattccga ccccacctcc
      901 gcccgacggg tcagggaaga atccgaggac tcaacccgca gcaccgtggg ctggcacagg
      961 aacttcaggc cactgttctt ctgcagcgcg ccgggaagca gccctgcttc ggtcaacacc
     1021 tggaagccgt tgcagatgcc aaccaccgac ccaccgtccg cggcaaaccg agcaatggcg
     1081 cccatcatcg gcgaaaagcg agcaatggcc cccggccgca gataatcgcc atgagcgaac
     1141 ccaccgggaa cgatcaccgc gtctatgccc gtcaggtcct catcgccatg ccaaagtaga
     1201 cgaccctcgc cgccgagctt ttccacggca gtaaccgcat ccatctcaca gtttgtgccg
     1261 ggaaagacca cgacacccac ggcagtcgcc atcaggcatc gtctccggtc gggccaccgg
     1321 ccggggtcac catcaccgtg gcgtcctcga tgaccgggtt ggtcaggaac gaggcacaca
     1381 ggtcctcgga ccggcgcgtc gcctcagcct cgtcggtcgc ctcgatggcg aaccggaccg
     1441 tcttgcccac cgtcacgtcg gctacaccgt cgtagccaag ggcgggaaga gcacgctcga
     1501 tcgtcgctcc ggccggatcg gcaatgccgc cccgcaacct gacgtccacc atcacgtcga
     1561 acttcatcgt cgtctcctct cgggatgcac tctcatcaga ccggtcagct acccacgcca
     1621 ggccagtcgg tgaacgaccg gccagtgatc cgctcgtagg cctccacgta acgcgacgag
     1681 gtggccgaga tgacctcgtc gggcagcagt ggcggtggcg gctgtttgtc ccagtccaga
     1741 ccatcgaggt ggtcgcggac gggctgcttg tcaaacgacg gtggcgtggc gcccggcttc
     1801 caggcctcgg cggaccagaa ccgggacgaa tccggagtga ggacctcgtc agccagcacc
     1861 agacgaccgt caaccatgcc gaactcgaac ttggtgtcgg cgatgatcag gccccgttcc
     1921 gcggcccact cggcgccccg taaataacag gtgatcgacg cctcacgggc tgcttcggcc
     1981 acctcagtac ccaccaggtc gacggactca gcgtacgaga tgttgacgtc atggccctcg
     2041 tcagccttgg tcgacggcgt gaacaccggt tcgggaaggc ggctggcctc cagtaggtcg
     2101 tcaggcatca gggtgccgtg catggttccc gaggctcggt actccttcca cgccgaaccg
     2161 gtgatgtagc cccggactat gcactcgatg ggcagcatct cagcccgatg gcaaagcatc
     2221 gtccgcccgg ccagttctgc gagaacctcc ggtggcgcac cgtctggctg accgacgctc
     2281 aggatctggt caaggtccgc tgtgtccgtc gagatgagat ggccgtcaac aaggccggca
     2341 aactgctcga accagaaggc ggtcatggcg gtgagcaccc gacccttgtt ggcaatgggc
     2401 tcagccatca ccacgtcgaa ggccgagatt cggtccgagg tgaccatcaa caggcggtcg
     2461 tcaccggcgt catagacgtc ccgcaccttc cccgagtgca ggtggggcag cggaatctgt
     2521 ggactcatgt ctctccgggt gtttacagga tcggttccgg atcgtaggcc gcggcatgcg
     2581 gatgggcggc caccacctcg gcgacccgtt cgatcaccac cgcgacctgg gccgaggcgt
     2641 ttccgacgaa ggccgacgga tcatccaaca aggcttccag cgcggcacga tccaggggca
     2701 ggcgatcatc ggcagccagt cgatccagga ggtcggtctc cgacaccccc tcctcacggc
     2761 gggccagggc tgaacctacg gcatgggcct tgatgacatc gtgggcttct tcccgaccca
     2821 tgccggcctg cactgctgca accagcaccc gggtggtggc cagaaacggc aggtactgcc
     2881 ggagctcgcg ttcgacgact gccggatagg caccgaactc atcgagcacg gtgaggaagg
     2941 tctggaacag gccatcggca gcaaggaagg cgtcggggag ggcgatgcga cgcaccaccg
     3001 agcaactcac gtcgccctcg ttccactggt ctccaactag cccgccgacc atggccaagt
     3061 ggcctcgcag gaccacagcc aggccgccga cccgttcgca cgaccgggcg ttcatcttgt
     3121 ggggcatggc cgacgagccg acctgcccgg ggcgaaagcc ctcagtggcc aactcgttgc
     3181 cggccatgag ccggacggtg cgagctaggt tcgccggccc accggatgcc tgaacgaggg
     3241 ccgacaccac gtcaaagtcc aacgaccgcg ggtacacctg ccccacagag tccagtaccc
     3301 ggtcgaagcc gaggtgcccg gccaccagcg actcgaggtg gtccaacttt gaggcatcac
     3361 cgtcgaacag gtcgagctgg tcctgctggg tgccgaccgg acccttgagg cctcgcagcg
     3421 ggtagccgga cagcaggtcg gtcacccgac gaagggagac cagcagctcc tcggctgccg
     3481 tagcgaaccg cttgcccagc gtggtggcct gagcggccac gttgtgacta cgaccgacca
     3541 tgacaagccc gtcgtgctcg gcggccagac gagctagacg agccagagcg gccaccatcc
     3601 ggtcgcgcac cacctcgagg ctgcgacgca cctggagttg ctcgacgttc tcggtgaggt
     3661 cacgcgacgt catgccctta tggatgtgct cgtggccagc cagcgcgcag aactcctcta
     3721 tgcgggcctt gacatcgtga cgggtcaccc gttcacgatt acggatcgag tccaagtcga
     3781 cctggtcgac caccgcccgg tgatcgtcga ccacggtatc gccgatggcc acgccgagtt
     3841 cctgctgcgc ttccagcacg gcgatccaga gttcacgctc catgaccacc ttggcttctg
     3901 gcgtccagag gtcgaccatc ggtcggctgg cgtagcggga ggcgaggacg ttttccataa
     3961 gcggcaggta cggagttcgg cggttgacgg gtccgactac ttcgggacca tctcggcgcg
     4021 gtgcgcctcg agttcggcca ccagtcccgg atcggag
//
LOCUS       DASCMR010000439         4678 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002149199, whole genome shotgun sequence.
ACCESSION   DASCMR010000439 DASCMR010000000
VERSION     DASCMR010000439.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 4678)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4678)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4678
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002149199"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..879
                     /gene="murB"
                     /locus_tag="QGG16_09875"
     CDS             <1..879
                     /gene="murB"
                     /locus_tag="QGG16_09875"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: protein motif:HMM:TIGR00179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008762 - UDP-N-acetylmuramate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HJP25623.1"
                     /translation="GALTTYRVGGAAARFVRPADVAELERVVGAVAKAGLASGRESGI
                     GVIPVLVLGRGSNLLVSDDGFAGLAVQLGPGFDEVVVDLETGGGTVRAGGGASLPVVA
                     RRTVAEGLAGMAWAVGVPGSIGGAVRMNAGGHGSDMSMVLVCASTVDLTTGLRRTRAV
                     DELSLGYRSSSVAGNEVVVSVELGLPLGDRAAGEARLAEIVRWRRANQPGGQNAGSVF
                     TNPSDDSAGRLIDAAGGRGLRIGTAEVSKRHANFIQVDEGGSADDVVRLMAEVVRLVS
                     EVHGVTLEFETVLVGF"
     gene            978..1670
                     /locus_tag="QGG16_09880"
     CDS             978..1670
                     /locus_tag="QGG16_09880"
                     /inference="COORDINATES: protein motif:HMM:NF015739.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsQ-type POTRA domain-containing protein"
                     /protein_id="HJP25624.1"
                     /translation="MAWVALSLIVTAVGLFAATRTELLDVDEIRIVGTSSNLKESSVL
                     EALSISVGSPMTGIDLDEMALRVAALPRVAGVEVERDWPGAVVVWIVERRAVVNAVAS
                     DGRLAALDADGTVLEHLDTADPSLPTIRVDGVGRPGVRLPGLGSLLDAADAVTEDLAA
                     WIVALVPTGDGVRAELVGGVEADLGLGDDYRDEMRALATVLHRVELSCIVRIDVSVHD
                     IPVVRRDDMHCS"
     gene            1900..2961
                     /gene="ftsZ"
                     /locus_tag="QGG16_09885"
     CDS             1900..2961
                     /gene="ftsZ"
                     /locus_tag="QGG16_09885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015441511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HJP25625.1"
                     /translation="MVGSPQNYLAVIKVVGVGGAGVNAVNRMIDAGLKGVEFIAVNTD
                     AQALLMSDADVKLDIGRELTRGLGAGSDPEIGRQAAEDHRAEIEEALEGSDMVFITAG
                     EGGGTGTGGAPIIAEAARAAGALTIGVVTRPFSFEGRRRSVQAEQGIVQLKEKVDTQI
                     VIPNDRLLDVSDEKTALLNAFDTADEVLLQGVQGITTLITTPGLINTDFADVRTIMAG
                     AGSALMGVGQATGDGRALNAARKAISSPMLEASIEGARGILLNISGPRDLGLFEVNEA
                     AEVVHGVAHPEANIIFGTVVDDEMGDDVRVTVIAAGFDRWDGDRPHAESAAPLAGGDA
                     IVDVFADRGDDLDVPSFLR"
     gene            2968..3663
                     /locus_tag="QGG16_09890"
     CDS             2968..3663
                     /locus_tag="QGG16_09890"
                     /inference="COORDINATES: protein motif:HMM:NF014619.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase family protein"
                     /protein_id="HJP25626.1"
                     /translation="MARELIRRSLPSGRTARVVMSEITDGDAAAGDVTIGGPGDAFTE
                     AKGWTRPWTLLDQVHGDGVVVVDAAGAYSGTRADAAVTAVVDAALAIRVADCAPVALL
                     GGRCVGVAHVGWRGLRAGIVERTVEAMKGLDDITPVAAVVGPHIGACCYEFGDADLDD
                     LAILFGSSIRSTTTAGRPALDLSAALSGILVGAGIPVTHDGACTSCDDRYWSYRATAT
                     ARRQAMVAWTEEG"
     gene            3667..4362
                     /locus_tag="QGG16_09895"
     CDS             3667..4362
                     /locus_tag="QGG16_09895"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF013345.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HJP25627.1"
                     /translation="MEHGTDRFSSPDELASRLGLLEDRLRELSGGRTSLLPVTKAFGA
                     DAVRAVLATGRTEVGENYAQELLGKHLELEAQREAEVEGTVPSARWHMIGGVQRNKVR
                     RLAGIVSLWQTVDRVDLVDELARRTPGARILVQVDPADTPGKGGCPPSDVEGLVSRAV
                     DGGLEVAGLMTVGVIGDVEATGTAFRVVARLADNLGLVERSMGMSDDLESAIEHGSTM
                     VRIGRALFGDRPG"
     gene            4459..>4678
                     /locus_tag="QGG16_09900"
     CDS             4459..>4678
                     /locus_tag="QGG16_09900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25628.1"
                     /translation="MKKLMLWLGLGPDEAYEDLSDEPILRGPLSSIEFAEARVAAETG
                     GKVSPLHTRTQTSNTVRTLPAESTGTVRS"
BASE COUNT          747 a         1382 c         1682 g          867 t
ORIGIN      
        1 ggggcattga cgacttatcg ggtgggcggg gccgccgccc ggttcgtccg gcctgctgat
       61 gtcgccgagc tggaacgggt ggtcggagcc gtcgccaagg cgggcctcgc ttctggtaga
      121 gaatctggca ttggggtgat cccagtgttg gtgttgggtc gaggatcgaa cctgctcgtc
      181 tccgacgacg gattcgccgg actggccgtt caactggggc ccggtttcga tgaggtggtg
      241 gtcgacttgg agacgggtgg cgggacggtc cgtgctggtg ggggagccag ccttccggtg
      301 gttgccaggc gcacggtagc cgaggggttg gccggcatgg cgtgggcggt cggggtgccc
      361 ggatcaatcg ggggtgccgt tcgaatgaat gctggtggcc atggatccga catgtccatg
      421 gtcctcgtct gcgcttccac ggtggatctg accaccggcc tacgtagaac ccgggcggtg
      481 gacgagttgt cactgggcta tcggagctcg tcggtggccg ggaacgaggt cgtagtgtcc
      541 gttgagcttg gactccctct cggcgaccgg gcggcgggcg aggcccgtct ggccgagatc
      601 gtgcggtgga ggcgggccaa tcagcccggt ggacagaatg ccgggtcggt gttcaccaac
      661 ccgtccgacg attcagccgg ccggctgatc gatgcggccg gcggtcgggg gcttcgaatt
      721 gggacggccg aggtgtccaa gaggcatgcg aacttcatcc aggtcgacga gggcggatcg
      781 gctgacgacg tggtccgtct catggccgag gtggttcgac tggtgagcga ggtccacgga
      841 gtcactctcg agtttgagac cgtgctcgtc ggcttctgat ggagaccagt caggacactg
      901 gtcaggacgc tggtgaggac actggtcagg acactggctc aaccgtttcg cctactcctc
      961 gtcgtagagg cctcgtcgtg gcctgggtgg cactctcgct gattgtcacg gcggtgggtt
     1021 tgttcgccgc cacacgcact gaactgctcg atgtcgatga gattcggatc gtggggacct
     1081 catcgaatct gaaggaatcc tccgtgctgg aggctctctc gatctccgtt ggttcgccga
     1141 tgaccggtat agacctcgac gagatggccc ttcgtgtggc ggcccttccg agagtggccg
     1201 gtgtcgaggt ggaacgggac tggcctggtg cggtggtggt gtggatcgtc gaacgtcggg
     1261 cggtggttaa cgcagtggcg tccgacggtc gactggcagc actggatgcc gacggtacgg
     1321 tgctcgagca ccttgacact gccgatccgt cgctgccgac catcagggtc gacggtgtgg
     1381 gacgtcccgg ggtccgcctg ccgggtctgg gatcgctgct ggatgcagcg gatgctgtca
     1441 cagaggatct ggctgcatgg attgtcgccc tcgtcccgac cggagacggc gtgcgggccg
     1501 agttagtggg cggagtcgaa gccgacctgg gcctgggcga cgactaccgc gatgagatga
     1561 gggcattggc caccgtgctg catcgggtag agctgtcgtg catcgttcgc atcgacgtct
     1621 ccgtccacga catccccgtc gttcgccgag acgatatgca ctgttcttga acggccgtct
     1681 gaaatcgggt ttcggagcct gaggcctgat gggttgacgt tctttgacca cgcgccgtag
     1741 tctcttgacc acggatcggg ttcaaagtgt ttcaaccttc gacttctact tgaaggttag
     1801 gcatgggtgt cgatggcatc tggacgatcc ccggaccgat cgtgagccga ccaccatgga
     1861 cggcacggga accaacgaga acgagaagag gaaaaaccga tggtgggaag cccccagaac
     1921 tacctggcag tgatcaaggt ggtgggcgtc ggcggtgccg gcgtgaacgc cgtcaaccgg
     1981 atgatcgatg ccggcctgaa gggtgtcgag ttcatagccg tgaacaccga cgcccaggca
     2041 ctcctcatga gcgacgccga cgtcaaattg gacatcggtc gagagctcac ccgcggactg
     2101 ggcgctggga gcgatcccga gatcggccgc caggcagccg aggatcaccg ggccgagatc
     2161 gaggaggcgc tcgaaggttc tgacatggtg ttcattaccg caggcgaggg tggtggcacc
     2221 ggtaccggtg gtgccccgat catcgctgag gcggcacgcg ccgccggggc tttgactatc
     2281 ggcgtggtca cccgaccgtt cagcttcgag ggtcgtcgtc gatcggttca ggccgagcag
     2341 ggcatcgtgc agctcaagga gaaggtcgac acccagattg tcatcccgaa cgaccgcctg
     2401 ctggatgtct ctgacgagaa gaccgctctt ctcaacgcct ttgatactgc tgacgaggtg
     2461 ctcctccaag gagtgcaggg catcacgacc ctgatcacca cgccgggcct catcaacact
     2521 gacttcgccg acgtgcgaac catcatggct ggggccgggt cggccctcat gggcgtgggg
     2581 caggccaccg gcgacgggcg ggccctcaac gcggcccgta aggccatctc tagccccatg
     2641 ctcgaggctt ccatagaggg agcccgcggc attctcctga acatctctgg cccgcgtgat
     2701 ctgggcctgt tcgaggtcaa cgaggcggcc gaggtggtcc acggcgtagc ccaccccgag
     2761 gccaacatca tcttcggaac cgtggtcgat gatgagatgg gtgacgatgt ccgggtcacg
     2821 gtcatcgctg cgggctttga ccgatgggat ggtgatcgtc cccacgccga gtcggccgca
     2881 ccgttggctg gcggcgacgc catcgtcgac gtgttcgccg atcgcggcga cgacctcgac
     2941 gttccgagct ttctcaggta ggggccgatg gccagggaac tgatccgacg gagtctcccg
     3001 tcgggtcgga ccgcccgggt cgtcatgtcc gagatcaccg atggtgacgc cgctgccggc
     3061 gacgtcacca tcggcggtcc gggtgacgcc tttaccgaag cgaaagggtg gacacgaccc
     3121 tggacgttgc tggaccaggt gcacggtgac ggcgtggtcg tggtggatgc tgccggcgcc
     3181 tactccggga cccgggccga cgcggcggtc accgcggtgg tcgacgcggc gctggccatc
     3241 cgggtcgccg actgcgcgcc ggtggccctg ctgggtggcc gttgcgtggg cgtggcccat
     3301 gtcggttggc gaggcctcag ggctgggatc gtcgagcgaa ccgtcgaggc catgaagggg
     3361 ctggacgaca tcacgccggt cgcggcggtg gtcgggccgc atataggggc ctgctgctac
     3421 gagttcggcg acgctgattt ggatgacctt gcgatcctgt ttggatcgtc gatccgctcc
     3481 acgacgacgg ccggtcggcc ggctctggac ctctcggcgg ccctgtcggg gatactggtt
     3541 ggggccggca tccctgtgac ccacgacggg gcctgcactt cgtgcgatga ccggtactgg
     3601 tcgtaccggg ccacggcaac cgcccgtcgt caggccatgg tggcctggac cgaggagggc
     3661 tgaacgttgg aacacggcac cgaccggttt tcatcgccag atgaactggc ctcgcgcctc
     3721 ggtctcctcg aagaccgcct ccgggaactc agcggaggcc gaacctcgtt gctcccggtc
     3781 accaaggcct tcggggccga cgcagtgcgt gcggtcttgg ccaccggccg gaccgaggtc
     3841 ggcgagaact acgcccagga actgctgggt aagcacctag agctcgaggc ccaaagggaa
     3901 gctgaggtcg aggggaccgt gccgtcggcc cgatggcaca tgatcggcgg ggtccagcga
     3961 aacaaggttc gtcgcctggc cgggattgtc tctctctggc agaccgtcga ccgcgtcgac
     4021 ttggtcgacg agttggctcg tcggacaccc ggtgcccgga tcctcgtgca agttgatcca
     4081 gccgacacgc cgggcaaggg aggctgccca ccgtccgacg tcgagggtct ggtgtcgagg
     4141 gcggtcgacg gtgggttgga ggtagcgggc ctaatgaccg tcggggtgat cggagatgtc
     4201 gaggccactg gaacggcctt ccgagtggtg gcacggcttg ccgacaatct tggtctggtt
     4261 gagcgatcca tgggaatgtc ggatgacctg gaatcggcca tcgaacacgg ttcgacaatg
     4321 gtccgcatcg gccgtgcgct gttcggcgat cggcccggct gattctgctc accagttggc
     4381 tagctactcg ggtggcgagc tggtctgggg gccggggtgc cgggagcgga ccgggtgtgc
     4441 cgataccatc ggtgttcgat gaagaagttg atgctgtggc tgggactcgg ccccgatgag
     4501 gcctacgagg acctgagcga cgagccgatc ctacgtgggc cattgtcatc cattgagttc
     4561 gccgaggctc gggtggccgc cgagaccggc ggcaaggtca gcccactaca cacccgcacc
     4621 cagacatcca ataccgtgcg gaccctcccg gccgaatcga cgggcaccgt gcgatccc
//
LOCUS       DASCMR010000440         9868 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002152137, whole genome shotgun sequence.
ACCESSION   DASCMR010000440 DASCMR010000000
VERSION     DASCMR010000440.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 9868)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9868)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9868
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002152137"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..423)
                     /locus_tag="QGG16_09905"
     CDS             complement(<1..423)
                     /locus_tag="QGG16_09905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006779552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TCP-1/cpn60 chaperonin family protein"
                     /protein_id="HJP25629.1"
                     /translation="MAKIITFDETARRSLERGMNQLADAVRVTLGPKGRNVVLEKKWG
                     APTITNDGVSIAKEIDLEDPYERIGAELVKEVAKKTDDVAGDGTTTATVLAWSMVREG
                     LRNVAAGANPMSIKKGIEAAVAAAVDSIRNSAQDVSSDK"
     gene            complement(636..929)
                     /locus_tag="QGG16_09910"
     CDS             complement(636..929)
                     /locus_tag="QGG16_09910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquitin-like small modifier protein 1"
                     /protein_id="HJP25630.1"
                     /translation="MDNVPAMAVTIRIPTTLRPLTSGQPEVNVEAGTVGEALAALDAT
                     HPGFTERITDESGTLRRFVNVFVSDEDVRFLNGLDTEVPDGAALAIVPAVAGG"
     gene            complement(922..1908)
                     /locus_tag="QGG16_09915"
     CDS             complement(922..1908)
                     /locus_tag="QGG16_09915"
                     /inference="COORDINATES: protein motif:HMM:NF014634.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008887 - glycerate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0031388 - organic acid phosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HJP25631.1"
                     /translation="MKVVAAPDKFRGTGTAREVAAAIGRAAATAGADCVEIPMADGGE
                     GLLDVLGGPDRTTVVTGPLGAPVEAGWRLDRGTAVIEMARVAGLELAGGADGNHPLDA
                     TTAGVGELILSAVESGARRVVIGMGGSATTDGGLGALDAMGSPARYRGVELLVACDVR
                     TRFADAAEVFGPQKGATDAHVRMLTGRLERLVQVYGERFDVDVSTLDRAGAAGGLAGG
                     LAAMGAELVDGIDLVAEELRLDEHVADADLVVTGEGWLDATSYEGKVVGGVGVYAAAA
                     GVPLLVVVGGAEPEVADRDGVVSLSERFGMARAMAEPTALLEIVIGEALARG"
     gene            complement(1965..2624)
                     /locus_tag="QGG16_09920"
     CDS             complement(1965..2624)
                     /locus_tag="QGG16_09920"
                     /inference="COORDINATES: protein motif:HMM:NF024791.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LytR C-terminal domain-containing protein"
                     /protein_id="HJP25632.1"
                     /translation="MNTRSRGGFGPSNAAAAPRAFLLITIAVLLGLVLLWKAVDSTPG
                     TMTPAADQAATADSLTGETPAEAGGASADEIPADADTDASADSGSDAPATTEAPAPTT
                     TQDLFPKPTHTPNEVNVLVANGSGVSGAAGKVTDMLSPLGWAMESPANANKTSVTGIY
                     YKTGYASDAQVIQEHFGEAPSILSQFPAGGLSVPDGTLDRIDNADIVVILGSDLAIQG
                     G"
     gene            complement(2621..2881)
                     /locus_tag="QGG16_09925"
     CDS             complement(2621..2881)
                     /locus_tag="QGG16_09925"
                     /inference="COORDINATES: protein motif:HMM:NF023092.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3263 domain-containing protein"
                     /protein_id="HJP25633.1"
                     /translation="MALTQRDRDILDFERSWWSATAPKDVQIRERFELSATRYYQLLG
                     EMLDTDDAMAYDPLVVRRLQRQRDRRRRARLEPRMIEEDGTR"
     gene            2972..3157
                     /locus_tag="QGG16_09930"
     CDS             2972..3157
                     /locus_tag="QGG16_09930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25634.1"
                     /translation="MGANAKQTGRISSSLAQAGYDSDFGALVNHEVAFAGIRLAMVWT
                     LIVTTIMFRGASRSASA"
     gene            3289..3362
                     /locus_tag="QGG16_09935"
     tRNA            3289..3362
                     /locus_tag="QGG16_09935"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3323..3325,aa:Thr,seq:tgt)
     gene            3448..4065
                     /locus_tag="QGG16_09940"
     CDS             3448..4065
                     /locus_tag="QGG16_09940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25635.1"
                     /translation="MQRFIERFGALFGAVSIIGMIVMMAIEGDPPDVSEKTTEQIVAH
                     WVDMGDGAWFALWVGVLVGILMLLWGLWTSNALRERGVTLLAPTAAVGTVCMAAGMAM
                     DSASRLALLDAAEHMPTAAVVAVSAMLQYLWVPFLFGMVLITVGVSASAKQTGLIPSW
                     LAWIGYATALILVIPHPISFIGFLVFAIWLLLSSIIMFRKTGATA"
     gene            complement(4145..5164)
                     /gene="rlmB"
                     /locus_tag="QGG16_09945"
     CDS             complement(4145..5164)
                     /gene="rlmB"
                     /locus_tag="QGG16_09945"
                     /inference="COORDINATES: protein motif:HMM:TIGR00186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HJP25636.1"
                     /translation="MSGSRGGSGRGSGGGARKGGPSKAGSSRGGPRRGGPQNVGKGNR
                     GAARPEPPPRRSSTGRPNKPGGGSGRVRGSGQRGTSPLGNRDGGDGPKGLGGDQVEGR
                     QAVRELLLAGTRRTREVVLAGDLDSAPILDDIIDLADEAKVTIREVSRNKFESMTRTE
                     AAQGVLALAQPLQEYELDDLLVPDAAGRDPFLLLLDGVTDPGNLGAILRSAECAGVTG
                     VVLPRHRAAGVTATVAKSAAGAIEHLRMTRVGGLPKALSQMSNAGVWSVGLDAGGDGA
                     IHQLAVADQPVALVMGAEGTGLSRLVRERCDTIAHIPLAGVLGSLNVSAAAAVALFEV
                     ARCRT"
     gene            complement(5161..5703)
                     /gene="ispF"
                     /locus_tag="QGG16_09950"
     CDS             complement(5161..5703)
                     /gene="ispF"
                     /locus_tag="QGG16_09950"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HJP25637.1"
                     /translation="MADSGSDRPTIPELRIGQGFDVHPFSEDSGRPMVLGGVTFDGPG
                     LAGHSDADAVAHAVTDALLGAAGLGDIGQRYPDTDAAFAGADSMALLANAAAAVAAEG
                     WTVANVDCTVVLETPKLAPRRDEMEVGLTRVVGGPVTIKGKRAEGLGALGRREGVACF
                     AVVLLVRSVAPSGREDGGTS"
     gene            complement(5696..6370)
                     /gene="ispD"
                     /locus_tag="QGG16_09955"
     CDS             complement(5696..6370)
                     /gene="ispD"
                     /locus_tag="QGG16_09955"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: protein motif:HMM:TIGR00453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050518 - 2-C-methyl-D-erythritol
                     4-phosphate cytidylyltransferase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HJP25638.1"
                     /translation="MSVWTIVVAAGRGERFGSDKQAADLGGRPVVSRSVATSMEASDG
                     VVVVVASERLVAAEALLAGLGGEATVVTLVAGGATRSASVRAGLAAVPDDAEVVLVHD
                     GARPLATAALFARVVAAVRAGADAVVPGVPVSDSLRAVDGGVVDRDGVLAVQTPQGFP
                     ADRLRAAHAAGTDASDDATLVEAVGGTVVVVDGEPANLKITRPVDLVLATESLGSADD
                     GSGFDG"
     gene            6479..7138
                     /locus_tag="QGG16_09960"
     CDS             6479..7138
                     /locus_tag="QGG16_09960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HJP25639.1"
                     /translation="MPDTTLFRETTLFAGLDDDVLGEIVAASQDLELRRGDVLFREDE
                     PPDELYVVVSGRIAIANKSIDGRESMVALMEEGDLFGEMGLFDGRGRSAGARALETSV
                     VTTVPYGPVRDIYEADPTLLWRVVDMLTGRLRTMDAALADSVFLDVTGRTAKRLLELA
                     GEDDEFSLPITQEELAGMVGASRERVNKAIASFIRLGWIEQIDRTYRITNREQLTIRS
                     R"
     gene            complement(7164..7835)
                     /locus_tag="QGG16_09965"
     CDS             complement(7164..7835)
                     /locus_tag="QGG16_09965"
                     /inference="COORDINATES: protein motif:HMM:NF013866.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HJP25640.1"
                     /translation="MRIELPSGTAAELVQSPSGPVDQAPSERGLVVIPDVMGMRPLFD
                     DLVARLAAETGWTVAAFELYPGREQLDVGDRLVAASTLHDDRVLGDAMAAAEATGAGT
                     VSILGFCMGGMYALKAVGTGRFERSCPFYGMIHVPEAWQGPGQREPLDAMAAGDPSSV
                     LAVIGTADAWTPPGHVDELEAAGATVLRYEGADHGFVHDASRPAHRADDAADAWAKVL
                     DWLAG"
     gene            complement(7853..9259)
                     /gene="radA"
                     /locus_tag="QGG16_09970"
     CDS             complement(7853..9259)
                     /gene="radA"
                     /locus_tag="QGG16_09970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HJP25641.1"
                     /translation="MASLTTGSRTRTTFECTSCGTPHPSWVGRCGSCGDWNALMEVPV
                     VRSGGSSVLAAANLGIGEVRPMSTLAPDESAAVPTGMAEADRAFGGGLVPGSVTLLGG
                     EPGIGKSTLTLQLAAARVGAGGRVLLVSAEESAGQVRLRAERLGAVHDDLWLASDTSV
                     EAILAHLDQLEPDLLIVDSVQTVHLAVEGGAPGSAGQVRASAQRLVVEAKARALATVL
                     VGHVTKDGSLAGPKTLEHVVDTVAELTGDRHHALRMLRVVKHRFGPTDEIGLFAMDAD
                     GLQSVDDPSRLFLADRAPDVAGSVVLPALEGHRPLLLEVQALVVRSSTHHPRRSPQGL
                     DGRRLALLLAVLERRVGIDPGALDVYATVVGGAQATEPAADLPLALAIVSAVVGRPLG
                     SDTVALGEVGLGGELRQVTGTGRRLMEAARLGFRRAVVPASTPGLPDGIELVRVATLA
                     EAVAAVGLLPAGGASRDR"
     gene            complement(9293..>9868)
                     /locus_tag="QGG16_09975"
     CDS             complement(9293..>9868)
                     /locus_tag="QGG16_09975"
                     /inference="COORDINATES: protein motif:HMM:TIGR01509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HJP25642.1"
                     /translation="DPGSDPEGLLVPFVRDNGGVVDPGEVADRYRAASLGHLSSGEFW
                     AAVGVPGEADTLDSTYLSRVRMRADVQPFLDRMEQRGLPVACLTNAVLPWSMQLRRRF
                     GLDQRVDPWVASGEIGARKPSPAMFEALRRMSSVEYADMLLIDSEPVTLDAARSLGIS
                     TVLLRGSALVPEGFSHPVIDGFAGLFRARPT"
BASE COUNT         1704 a         3467 c         3212 g         1485 t
ORIGIN      
        1 cttgtcgctg gagacgtcct gagccgagtt gcggatggaa tccacagcgg cggccacggc
       61 ggcctctatg cccttcttga tggacatcgg gttggcaccg gcggccacgt ttcgtaggcc
      121 ctcgcggacc attgaccagg ccagaacggt ggccgtggtg gtgccgtcac cggcgacgtc
      181 gtcggtcttc ttagcgacct ccttgaccag ctcggcgccg atgcgctcgt acgggtcttc
      241 gaggtcaatc tccttggcga tggagacgcc gtcgttggtg atggtagggg cgccccactt
      301 cttctccagg acgacattgc gaccctttgg gccgagcgtg acgcgcacgg cgtcggccag
      361 ctggttcatg cccctctcga gggaacggcg ggccgtctcg tcgaacgtga tgatcttcgc
      421 catcaggaat gcctctcagt caggttttcg gtacgtactc aagtgatgac cggtcggtcg
      481 gcaaccggtc gacatggccg gcagctcacg ggcgcggctg ctggcactct cttgctacga
      541 gtgctaatcc aaccagcgga tcggcggttt tccaacgtcg gaaggttgtc cgacaggcca
      601 ccgtcgaccg ctgaagcggc cgaccaaaag ctggctcagc ctccggcaac agccgggacg
      661 atggccagcg cagcgccgtc gggcacctcg gtgtcaagcc cattcaggaa acggacgtcc
      721 tcgtcgctca cgaacacgtt cacaaagcga cgcagggtgc cggactcgtc ggtgattcgc
      781 tcggtaaacc ctgggtgggt ggcatcaaga gctgccaggg cctcgcccac ggtgccggcc
      841 tcgacgttga cctcgggctg accggaggtc agcggacgga gggtggtggg gatgcggatg
      901 gtgacggcca tggccggcac gttatccacg ggccagcgcc tcaccgatga cgatctccag
      961 gagggcggtg ggctcagcca tggcccgagc catgccgaag cgttccgaca gcgagacgac
     1021 cccatcgcgg tccgccacct ccggttcggc acctcccacc accaccagga ggggcacccc
     1081 ggccgcagcg gcgtagacgc ccacgccgcc gaccactttc ccctcatacg aggtcgcatc
     1141 gagccagccc tcaccagtga ccaccaggtc ggcgtcggct acgtgttcgt ccaggcggag
     1201 ctcctcggcc accaggtcga tcccgtcgac tagttcagcg cccatggcgg ccaggcctcc
     1261 ggctagccca ccggccgccc cggcccgatc gagggtcgac acgtctacgt cgaagcgttc
     1321 gccgtagacc tgcacgagac gttcgagtcg accagtcaac atccggacgt gagcatcggt
     1381 ggcgcccttc tgagggccga acacctcggc cgcgtcagca aaccgggtcc gcacgtcaca
     1441 ggccaccaac aactccacgc cccggtaccg ggcaggtgag cccatggcgt cgagcgcacc
     1501 caacccaccg tcggtggtgg ccgacccgcc catgccgatg acgacccgtc gagccccgga
     1561 ctccacggcg ctcaagatga gctccccgac accagccgtc gtggcgtcca gcggatggtt
     1621 tccatcggcg cctccggcca gttccaggcc cgctacccgg gccatctcga tgaccgccgt
     1681 gcccctgtcc agtcgccagc cggcctctac cggagcgccc agcggtccgg tgaccaccgt
     1741 ggtccggtcc ggtccaccca ggacgtcgag caggccttcg ccgccgtcgg ccatggggat
     1801 ctcgacgcag tcggccccgg cggtggcggc ggcccgccca atggccgcgg cgacctcacg
     1861 ggccgtgccg gtgccccgga acttgtcggg ggcggcgacc accttcatcg aagcgaccag
     1921 tttccgttcc ggatcgccct atccgataaa caggtcgacc ggggtcagcc gccctggatg
     1981 gccaggtcgg atccaaggat gaccacgatg tcggcgttgt caatccggtc cagtgtgccg
     2041 tcagggaccg agaggccgcc cgccgggaac tgcgagagga tgctcggggc ctcaccgaag
     2101 tgttcctgga ttacctgagc gtcgctggcg tagcccgtct tgtagtagat cccggtgacc
     2161 gaggtcttgt tggcgttggc cggagactcc atggcccagc ccagtgggct gagcatgtcc
     2221 gtgaccttgc cggctgcgcc ggatacgccc gagccgttgg ccaccagaac attcacctcg
     2281 ttgggggtgt gcgtgggctt cggaaagaga tcctgggtag tggtcggggc cggggcctcc
     2341 gtggtggctg gcgcatcgct tccggaatcg gccgatgcgt ccgtatcggc gtcggccggt
     2401 atctcgtcag cagaggcacc gccagcctcg gcgggcgtct cgccggtcaa cgaatcggca
     2461 gtggcggcct ggtcggcagc cggcgtcatg gttcccggag tcgagtcgac ggccttccag
     2521 agcagaacca gtccaaggag gacggcaatg gtgatcaaca ggaaggcccg gggggccgcg
     2581 gcggcgttgc tcggaccgaa cccaccgcgt gagcgggtat tcatcgggtg ccgtcttcct
     2641 cgatcatccg gggctcgagg cgggcccgac gacgacggtc acgctggcgc tggaggcgac
     2701 gtacgaccag cgggtcgtag gccatggcgt cgtcggtatc gagcatctcg ccgagcagct
     2761 ggtagtagcg ggtagccgag agttcgaacc gctcacggat ctgaacgtcc ttaggcgcgg
     2821 tggccgacca ccacgatcgt tcgaagtcga gaatgtcccg gtctcgctgc gtcagtgcca
     2881 caccctgatg attgttcacc cggggtggcc attcaagtac ccccggcgat gggaatcccc
     2941 acgcagtggg caggtactga ttctggtcag tgtgggcgcc aacgcgaagc agaccggccg
     3001 tatctcatcg tcgctggccc aagccgggta cgactccgat ttcggggccc tggtcaacca
     3061 cgaagtggcc ttcgccggca tcaggctggc catggtctgg acactgattg tcaccaccat
     3121 catgttccgg ggtgccagta ggtcggcctc ggcctaaggc cggaggcgtc aagacgggga
     3181 acagccggcg gaatgggtcg gacgaaacgt ccggcccatc tcagtagcct cgtcagggag
     3241 ggaggcccgg ccacgtcgat taactggtcg gaagacccgc accatcccgc ccgggtagct
     3301 cagttggtca gagcaggcgc cttgtaagcg tcaggtcgtc ggttcgaatc cgacctcggg
     3361 ctcaaggtcc cgcaatccag ctggatccgt gcgatgctcg cgatcccggc ggggaacgga
     3421 ccctgccact ggcgggagga gtcccccttg caacgcttca tcgaacgctt cggcgccctg
     3481 ttcggggccg tttcgatcat cggcatgatc gtcatgatgg ccatcgaggg cgatccgccg
     3541 gatgtatccg agaagaccac cgagcagatc gtcgcccact gggtggacat gggcgacggg
     3601 gcctggtttg ccctgtgggt gggggtcctc gtggggattc tcatgttgct ctgggggctc
     3661 tggaccagca acgccctccg ggaacgaggg gtgaccctcc tggcccccac tgcagccgtg
     3721 ggcaccgtct gcatggccgc cggcatggcc atggactccg cttcccggct cgccctcctc
     3781 gacgccgccg agcacatgcc caccgctgca gtggtggcgg tcagcgccat gctccagtac
     3841 ctgtgggtgc ccttcctttt cggcatggtc ctcatcacgg tcggtgtgag cgcctcagca
     3901 aaacagacgg gcctcattcc ctcgtggttg gcctggatcg gctatgcgac agctctcatc
     3961 ctcgtgatcc cccacccgat ctccttcatc ggcttcctgg tgttcgccat ctggctgctg
     4021 ctctccagca tcatcatgtt ccgcaagacg ggcgcgacag cctgaccacg gtcacaggtc
     4081 gcgggcccgg ggcgtgcacg ccccgggccc gctgcgacct aggccgtccc gccgtacgcc
     4141 gggctcaggt ccgacagcgg gccacctcaa agagggcaac ggcggcagcc gccgagacgt
     4201 tcagcgagcc gagtacccca gccagcggga tgtgggcaat ggtgtcgcac cgctcccgca
     4261 ccaggcggga caggccagtc ccctcggcgc ccatgacgag ggccaccggc tggtcggcca
     4321 ccgcgagttg gtggatggcc ccatctccac cagcgtcgag gcccacggac cacacgccag
     4381 cattcgacat ctgtgacaac gccttgggca ggcctccaac cctggtcatc cgaaggtgct
     4441 cgatagcccc agctgccgac ttggccaccg tggccgtcac cccagccgcc cggtgacggg
     4501 gcagaaccac accggtcacc ccggcacact ccgctgagcg caggatcgcc ccgaggttgc
     4561 cgggatcggt cacaccgtcg agtagcaaca ggaacgggtc tcgaccggca gcgtcgggca
     4621 cgaggaggtc gtcgagctcg tactcctgca gcggctgggc gagggccaga accccttggg
     4681 cagcctcggt gcgggtcatg gactcgaact tgttacgtga cacctcgcga atggtgacct
     4741 tggcctcgtc ggccaaatcg atgatgtcgt cgaggatggg ggctgagtcg agatcgccgg
     4801 ccagaactac ctcacgggtc cggcgggtgc cggccagcag gagctctcga acggcctgac
     4861 ggccctccac ctggtcgcca cccagacctt tgggcccgtc gccaccgtca cgattaccca
     4921 acggcgaggt gccccgctgg cccgagccac ggacccggcc ggaaccgccc ccgggcttgt
     4981 tgggtcgacc ggttgacgac cggcggggcg gcggttcagg gcgagccgca ccacggttgc
     5041 ccttgccgac gttctgagga ccgccgcgac gggggccacc cctactcgaa ccagccttac
     5101 tcggaccgcc tttgcgggcg ccaccgcccg aaccccttcc acttccacct cgggaaccac
     5161 tcacgaggtg cctccatctt ctcgccccga cggggcaacg gatcgaacca acaggacgac
     5221 ggcgaaacag gccacaccct cacgacggcc cagggcaccg agaccctcgg cccgcttgcc
     5281 cttgatggtg accgggccac cgactactcg agtcaagccg acctccatct catcacgacg
     5341 gggtgccaac ttcggggtct cgaggaccac tgtgcagtcc acgttggcca ccgtccaacc
     5401 ctcagcagcc accgcggcag ccgcattggc caacagagcc atgctgtcgg caccggcgaa
     5461 ggcagcgtcg gtgtctgggt agcgctgccc tatgtcacct agaccagcgg ccccaagtag
     5521 ggcgtcggta acggcgtggg ccaccgcatc ggcgtcgctg tgacctgcca gaccagggcc
     5581 gtcgaacgtc acgccgccca ggaccatggg ccggccggaa tcctcgctaa acgggtggac
     5641 gtcaaagccc tgcccgatac gcagttcggg gatcgtcggt cgatcagacc cggagtcagc
     5701 catcgaaacc gctcccatca tcagccgacc cgagggactc ggtggccagc acaaggtcca
     5761 ccggtcgggt gatcttgagg ttcgccggct cgccatccac gaccaccact gtgccaccga
     5821 cggcctccac gagggtggcg tcgtcgctag cgtcggtccc agcggcatgg gcggcccgga
     5881 gtcgatcggc tggaaagccc tggggcgtct gcaccgccag cactccgtca cgatccacta
     5941 caccaccgtc gaccgcccgg agcgagtcag agaccggcac accgggcacc acagcatcgg
     6001 cgccagcccg aacagcagcc accactcggg caaacagcgc cgcggtggcc aaggggcggg
     6061 caccatcgtg taccagcacc acctcagcgt catcggggac ggcagccagc ccggcccgca
     6121 cagacgcgga tcgggtcgcg ccgcctgcca ccagggtcac caccgtcgcc tcgccgccga
     6181 ggccggccaa tagcgcctca gcggccacaa gtcgttcgga agccaccacc acgaccacac
     6241 catcggacgc ttccatcgag gtggccacgc tccgggacac caccgggcga ccaccgaggt
     6301 cggcggcctg tttgtcgcta ccgaaccgct cgccacgacc ggcagccacc acgatcgtcc
     6361 agacactcat cgggaccccc tgcggcatct ttcccagttc ggcacgcaac atcccaaggt
     6421 cggagcagat gctggtgtcg gccgggcgct ttgcatctca ctagcatggc caatcgacat
     6481 gccggacacc acgctctttc gcgaaaccac cctgttcgcc gggttagacg atgacgtcct
     6541 cggggagatc gtcgccgcca gccaggacct cgagttgcgg cgcggggacg tgctgtttcg
     6601 tgaggacgaa ccgcccgacg agttgtacgt cgtggtgtcg ggccggatcg ccatcgccaa
     6661 caagtccatc gacggccggg aatcaatggt ggccctcatg gaggagggcg acctgttcgg
     6721 cgagatgggc ctgttcgacg ggcggggccg ctcggccgga gcccgggcgc tggaaacctc
     6781 ggtggtcacc accgtgccgt acggaccggt acgcgacatc tacgaagccg acccgaccct
     6841 gctgtggcgg gtggtcgaca tgctgaccgg gcgactgcgg accatggacg ccgctctggc
     6901 cgactcggtg ttcctggacg tgaccggacg caccgccaag cgactactgg aactggctgg
     6961 cgaggatgac gagttctcgc tgcccatcac ccaagaagag ctagccggaa tggtcggcgc
     7021 atcacgggag cgggtcaaca aggccatcgc atcgttcatc cgactggggt ggatcgaaca
     7081 aattgaccgc acctaccgga tcactaaccg cgaacagttg acgatccgct ccaggtagct
     7141 cgctccagtt ggccaggtcc ggctcagccg gccagccagt cgagaacctt cgcccacgca
     7201 tccgccgcgt cgtcggcccg gtgggccggt cgcgatgcgt cgtgcacgaa accgtggtcg
     7261 gcgccctcgt agcgaagaac cgtcgcgccg gcggcctcga gttcgtcaac gtggcctggt
     7321 ggcgtccatg cgtcggccgt gccgatcacc gccagcaccg acgacggatc gccagcagcc
     7381 atcgcatcca acggctcccg ttggcccggg ccctgccagg cctcgggcac gtgaatcatt
     7441 ccgtagaacg ggcacgaccg ctcgaaacgc ccggttccca ccgccttgag ggcgtacatc
     7501 ccgcccatgc agaagcccag aatcgacacc gtgccagccc cagtggcctc cgcggcagcc
     7561 atggcatcgc ccagtacccg gtcgtcgtgc agcgtcgaag cggcgaccag acggtcaccc
     7621 acgtcgagtt gctcgcgacc cggatagagc tcgaaggcag ccaccgtcca accggtctcg
     7681 gcggccagac gcgccacaag gtcgtcgaac aggggtcgca tccccatgac gtccgggatc
     7741 accaccagac ctctttctga aggggcttga tccacaggac ccgacggcga ttgaaccagt
     7801 tcggcggcgg tgcccgaggg cagttcgatt cgcacgggga cgttcctagc agtcagcgat
     7861 cccggctggc accccctgcg gggagcaggc cgacggcggc gacggcctcg gcgagggtgg
     7921 caacgcggac cagttcgatg ccgtcgggca gaccaggtgt ggacgccgga acgacagcac
     7981 gccgaaaacc caggcgggcg gcctccataa ggcgccgacc ggtgccagtc acctgacgca
     8041 gctccccacc gaggcccacc tcgccgaggg ccacagtgtc cgaccccagt ggacgaccca
     8101 ccacggcgga cacaatggcg agggcgaggg gaaggtcagc ggccggttcg gtggcctgag
     8161 cgccacccac cacggtggcg tacacgtcaa gtgctccggg atcgatgccg acgcgacgtt
     8221 ccagaaccgc cagtaacagc gccagccggc gcccgtcgag accctggggt gaacgccgag
     8281 ggtgatgtgt ggacgaacgg accactaggg cctgaacctc caataggagc ggccgatgcc
     8341 cctccagcgc gggcaggacc actgaaccag caacgtcggg ggcccggtcg gccagaaaaa
     8401 gtcgactggg gtcgtcgacg gactgcagcc cgtcggcgtc catcgcgaac aggccgatct
     8461 cgtcggttgg accgaaacgg tgcttgacga cccgcagcat ccgcagggcg tgatggcgat
     8521 caccggtcag ctctgccacc gtgtcgacca cgtgttccag tgtcttgggt ccggccagcg
     8581 aaccatcctt ggtgacatga ccgaccagca cggtggccaa cgcacgggcc ttggcctcga
     8641 ctaccaggcg ttgcgccgac gcccggactt ggccggccga accgggcgca ccgccctcga
     8701 cggctaggtg gacggtctgc accgaatcca cgatgagtaa gtcgggttcg agttgatcga
     8761 gatgggccag gatcgcctcg acagaggtat cgctggccaa ccagaggtcg tcgtgcacag
     8821 cgcccaaccg ctcggcccgc aaccgaacct gacccgcaga ctcctcggcg ctgaccagca
     8881 ggacccggcc gccagcaccg acccgtgcgg cggcgagttg cagggtgagg gtcgacttcc
     8941 cgatgcccgg ctcgccgccc agcagggtga ccgagccggg caccaggccc cctccgaacg
     9001 cccgatcggc ttcagccata ccggtaggca ccgcggccga ctcgtcgggg gccaacgtcg
     9061 acatgggccg aacctcgccg atcccgaggt tcgccgcggc gagcacgctc gagccaccgg
     9121 accggactac cggaacctcc atcagggcgt tccagtcgcc gcaactaccg cacctgccaa
     9181 cccaactggg gtgtggggtg ccacacgagg tgcactcgaa cgtggtgcgg gtacgggatc
     9241 cggtggtgag gctcgccata ggaccgaacc tacgaaccgc ctgtgacagg ggtcaggtgg
     9301 ggcgggcccg gaagaggcca gcgaacccgt cgatgaccgg gtgggagaac ccctcgggca
     9361 caagtgccga gccacgcagc aacaccgtgg aaatgcccaa gcttcgtgcc gcgtccaggg
     9421 tgaccggttc cgaatcgatg agcaacatgt cggcgtactc cacgctggac atccgccgca
     9481 gagcttcgaa catggccgga ctgggcttac gggccccgat ctccccggag gccacccacg
     9541 gatcgacccg ctggtccagc ccgaagcgac gccgcaactg catcgaccac ggcagcaccg
     9601 cattggtcag acacgccacg ggcaggcccc gctgctccat ccgatctaga aacggctgga
     9661 cgtcggcccg catccgcacc cgcgacaggt aggtcgaatc gagcgtgtcg gcctcgcccg
     9721 gcacgccgac ggcggcccag aactcgccgc tggagagatg tccaaggctg gccgcccggt
     9781 accggtcggc aacctcaccg ggatccacta caccgccgtt gtcgcgcacg aacggcacga
     9841 ggagtccctc gggatcgctg cccggatc
//
LOCUS       DASCMR010000441         5806 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002153344, whole genome shotgun sequence.
ACCESSION   DASCMR010000441 DASCMR010000000
VERSION     DASCMR010000441.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 5806)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5806)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5806
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002153344"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..3092)
                     /gene="ileS"
                     /locus_tag="QGG16_09980"
     CDS             complement(<1..3092)
                     /gene="ileS"
                     /locus_tag="QGG16_09980"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012225262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004822 - isoleucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006428 - isoleucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HJP25643.1"
                     /translation="MSDTPYPEVGRPDFPAIEDRVLARWASDGTFLASVDARPAESEY
                     VFYDGPPFANGLPHHGHLLTGYVKDVVPRYQTMRGHRVDRRFGWDCHGLPAEMEAEKE
                     LPVAGRADIIEYGIDRFNAQCRQSVLRYTGEWEKTVTRQARWVDFEDDYKTMDPDYME
                     SVMWAFKQLWDKGLVYEAFRVMPYSWGAETPLSNFEIRLDDATRPRQDPAITVAFELD
                     PAKSDLGPMRILAWTTTPWTLPSNLALAVGPDVSYSLRVDADGTVLVIGTDAVERYAA
                     QLEDTTEVGTCTGRDLVGRTYTPLFDFFADRTDAFRVLAADFVDAGDGTGVVHMAPGF
                     GEDDQVTCEAADIPIGRAVPVDDQGRFTDDVAQWVGQNVFEANPDIIRHLKEAGRVIR
                     HDSYEHNYPHCWRTDTPIIYKAISSWYVKVTDLRERMLATNAEINWVPDHIRDGRFGM
                     WLDGARDWSISRNRFWGSPIPVWRSDDPDYPRIDVYGSLDEIEQDFGVRPDDLHRPFI
                     DDLTRPNPDDPTGRSTMRRVPEVLDCWFESGSMPFAQLHYPFENRERFEEHFPADFIV
                     EYINQTRGWFYTLHVLATALFDRPAFQNVICHGILLAEDGAKLSKKHRNYTEPSAIFE
                     AQGADALRWYLMSSNIVRGGDLRITDSGIDDVVRQVLLPVWNAYSFFTLYANVDGHWA
                     TMRTDSTHLLDRYLLAKTRRLVESVQDRMDTYDLPGATSEIQGFLDALNNWYIRRSRD
                     RFWARAATDPTADTDEAVDKRDAHDTLYTVLVTLCRVAAPFLPMVAEEIHTGLTGGST
                     SVHLQDWPDAADLPSDPDLVDRMDRLRDVASTALRLREDHGLRVRLPLSSLSVAGTDS
                     ETLAELLDLLLDEVNVKAVHLTNDLESHARFVLRPDGRALGPRLGGDVQSVFAKARSG
                     DYVRNDDGTVTVAGHVLAADEFELGVESPEGVTAGALSSGDAVVVLDTEVTDELTCEG
                     LARDVVRHVQQARRDADLVVTDRIKLTVDGDEAVLDAIRIHEAHVAGQVLAADIVYGD
                     P"
     gene            complement(3166..4785)
                     /locus_tag="QGG16_09985"
     CDS             complement(3166..4785)
                     /locus_tag="QGG16_09985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020377339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadD3 family acyl-CoA ligase"
                     /protein_id="HJP25644.1"
                     /translation="MNAPWSTIPQLVDDAAIRFGDREAFVDEDRRWTFTQYRDRIHAA
                     ARAFMAHDVQPGDRIAVWAPNLAEWAVAALGAHCVGAVLVPVNTRFKGREAVNLLARS
                     SARILFTVTDFLDTDYVAMLNEVGEGSTGLSDRLPHLDQVVVLRGAVPEGSTAWDNFL
                     AAGDAVDDADRAERSAAVTGDDLCHIMFTSGTTGAPKGAMLRHEAICRAFLSWSDVIG
                     LEEGDRYLVVNPFFHAFGLNSGILACLMKGVTLVPHLVFDVPSVMRRVAEERISMLPG
                     PPAIYQTILSHPDINALDLSSLRLAVTGAAAIPVQMIHDMRERLGFEKVVTGYGLTEA
                     SGIATMCRHDDDPVTIAGTSGRAIDDVEVRIVDADGAECPPGTPGEVVVRGYNVMVGY
                     LDSPEQTAEAIDADGWLHTGDIGVMDARGYLDITDRVKDMFINGGFNVYPAEVEHLML
                     DHPAIAQVAVVGVPDERMGEVGAAFVIAAPDRCVDGEPDPDQIVAWCRDAMANYKVPR
                     LVVVVDHLPMNASGKVLKFELRDRAAALRDR"
     gene            complement(4782..5651)
                     /locus_tag="QGG16_09990"
     CDS             complement(4782..5651)
                     /locus_tag="QGG16_09990"
                     /inference="COORDINATES: protein motif:HMM:NF017532.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytanoyl-CoA dioxygenase family protein"
                     /protein_id="HJP25645.1"
                     /translation="MSGPTSEPFRPVTDDEIDAFVRDGVVHLPAILPTEWVELLVEPV
                     EATIADPVITTDMTALRAVVTDTQPHSTGPGRFLSGVDHWLHDPAFAAFAATSPLPAI
                     AAALMDAERVHLYEDSVLVKEPGTAEATALHQDLGYFHLEGDRICTTWVPLDPVTVDT
                     GAVAYLRGSHRSGLVHRPNWFVSDEPLPGAEGTPVPTIDVDDPRLVRFVVEPGDIVVH
                     HAATLHGAGPNRSTTSRRRAVSVRYCGNDVHYRFRPGVPAKAHHDQVRSGDPVVDHPG
                     CPVVWRRTVGSAR"
BASE COUNT          948 a         1732 c         2133 g          993 t
ORIGIN      
        1 gggtcgccgt agacgatgtc ggcggccagg acctgaccgg ccacatgggc ctcatggatg
       61 cggatcgcgt cgagtaccgc ctcatcgccg tcgaccgtca gtttgatgcg gtcggttacc
      121 accagatcgg cgtcgcgtcg ggcctgctgg acatggcgga ccacgtcacg ggccagaccc
      181 tcacaggtca gttcgtcggt cacctcggta tcgagcacga cgacggcgtc gccactactc
      241 aacgctccag ccgtgacccc ctcgggtgac tcgacgccca actcgaactc gtcggcggcc
      301 agcacgtggc cggccacggt cactgtccca tcgtcattgc ggacgtagtc gccggatcgg
      361 gctttggcga acactgactg gacgtctccg ccgaggcggg gtccgagggc ccgcccgtcg
      421 gggcggagca cgaaccgggc atgggattcc aggtcgttgg tcaggtgcac ggcctttacg
      481 ttgacttcgt cgagcagcag gtcgagcagc tcagcgagcg tttcgctgtc ggtgcccgcc
      541 accgacaacg acgacagggg aagccgcacc cggagaccgt gatcctcgcg gagtcgaagg
      601 gctgtcgagg ccacatcgcg gaggcggtcc atccggtcca cgagatcggg gtccgacggg
      661 aggtccgctg catcaggcca gtcctggaga tggacgctgg tcgagccacc agtcaggcca
      721 gtgtggatct cctcggccac catgggcaag aacggggcgg ctactcgaca gagggtgacg
      781 agcaccgtgt agagggtgtc gtgtgcgtcg cgcttgtcga cagcctcgtc ggtgtcggcc
      841 gtcgggtcgg tggccgcccg ggcccagaag cggtcacggc tgcgtcggat gtaccagttg
      901 ttgagggcgt cgaggaaccc ctggatctcg gaggtggccc cgggcaggtc gtaggtgtcc
      961 attcggtcct gcactgactc gacgaggcgg cgggtcttag ccagcagata ccggtcgagc
     1021 aggtgggtgg agtcggtccg catggtggcc cagtggccgt cgacgttcgc gtacagcgtg
     1081 aagaatgagt aggcgttcca gacgggcagc agcacctggc gcaccacatc gtcgattccg
     1141 ctgtcggtaa tgcgaaggtc gccaccccgg acgatgttgg acgacatcag gtaccagcgc
     1201 agggcatcgg caccttgggc ctcgaagatg gccgatggtt cggtgtagtt gcggtgcttc
     1261 ttggagagct ttgccccgtc ctcggccaac aggatcccgt ggcagatgac gttctggaag
     1321 gccggtcggt caaacagggc ggtggccaac acgtggaggg tgtagaacca gccgcgagtc
     1381 tggttgatgt actcgacaat gaagtcggcc gggaagtgct cctcgaaacg ctctcggttc
     1441 tcgaacgggt agtggagttg ggcgaatggc atggagcccg actcgaacca gcagtcgagc
     1501 acctcgggca ctcgacgcat ggtggaacgg ccggtcggat cgtccgggtt gggtcgggtc
     1561 aggtcatcga tgaacgggcg gtgcagatcg tcgggccgca ccccgaagtc ttgttcgatc
     1621 tcatcgagac tgccgtacac gtcaatgcgg gggtagtcag gatcgtcgct gcgccacacc
     1681 gggatgggtg agccccagaa gcggttccga ctgatggacc agtcgcgcgc accgtccagc
     1741 cacataccaa agcgaccatc gcggatgtgg tcggggaccc agttgatctc ggcgttggtg
     1801 gccagcatcc gttcgcgcag gtcggtgacc ttcacgtacc acgacgagat ggccttgtag
     1861 atgatcggtg tgtcggtgcg ccagcagtgc gggtagttgt gttcgtagct gtcgtggcgg
     1921 atgacgcggc ccgcctcctt gaggtggcgg atgatgtccg gattggcttc gaaaacgttc
     1981 tggccgaccc actgggcgac gtcgtcggtg aaacgacctt ggtcatcgac gggcacggcc
     2041 ctcccgatgg ggatatcggc ggcctcgcag gtcacctgat cgtcctcgcc gaacccggga
     2101 gccatgtgga caacgccggt gccgtcgcca gcatctacga agtcggcggc gaggacccgg
     2161 aaggcatcgg tacggtcggc gaagaagtcg aacagcgggg tgtaggtacg tcccaccagg
     2221 tcacggcccg tgcaagtgcc gacctcggtg gtgtcttcga gttgggcggc gtagcgctca
     2281 acggcatcgg tgccgatgac taggacggtg ccgtcggcgt cgactcgcaa cgagtagctg
     2341 acatcgggac ccacggcgag ggccaggttc gacggcaggg tccacggtgt ggtcgtccac
     2401 gccaggatcc gcatgggccc caggtcgctc ttggccggat ccagttcgaa tgccacggtg
     2461 atggccgggt cctggcgggg tcgggtggcg tcgtcgaggc ggatttcgaa gttagatagc
     2521 ggggtctcgg caccccacga gtagggcatg acccggaatg cctcgtagac gaggcccttg
     2581 tcccagagct gcttgaacgc ccacatgacc gactccatgt agtcggggtc catggtcttg
     2641 tagtcgtcct cgaagtcgac ccaccgggcc tggcgggtga ccgtcttttc ccattctccg
     2701 gtgtaccgca ggaccgactg tcggcactgg gcattgaagc ggtcgatgcc gtattcgatg
     2761 atgtcggccc ggccggcgac cgggagttcc ttctcggcct ccatctcggc gggcaggccg
     2821 tggcagtccc aaccgaagcg acggtcgacc cggtggcccc gcatggtctg gtaacggggg
     2881 acaacgtctt ttacgtagcc ggttaacagg tgtccatggt ggggcaggcc gttggcgaac
     2941 ggggggccat cgtagaagac gtactccgac tcggcggggc gggcatcgac ggaggccagg
     3001 aaggtcccgt cgctggccca gcgggccagc acgcggtcct cgatggccgg gaagtcgggt
     3061 cggcccactt ctgggtaggg ggtgtcgctc atgaccgggc tgaggctacc ggggcggtcc
     3121 gaggcagtcg ggcctgtcgg gcggctgggt cggggcagcg gcggctcagc ggtcgcgcag
     3181 ggcggcggcc cggtcccgga gttcgaactt gagcaccttg ccgctggcgt tcatcggcag
     3241 gtggtcgacc accaccacta gacgggggac cttgtagttg gccatggcgt cgcgacacca
     3301 ggccacgatc tggtcgggat cgggttcgcc gtcgacacag cggtcgggtg cagcgatgac
     3361 gaaggctgcg ccgacctcgc ccatgcgttc gtcagggaca ccaaccacgg cgacttgggc
     3421 aatggccgga tggtcgagca tcaggtgctc gacctcagcg ggatacacgt tgaacccgcc
     3481 gttgatgaac atgtccttca ctcggtcggt gatgtcgaga tagccgcggg cgtccatcac
     3541 cccgatgtcg ccggtgtgga gccacccgtc ggcgtcgatg gcctcggcgg tctgctcggg
     3601 tgaatccagg tagccgacca tcacgttgta gccccggacg accacctcgc ccggtgtgcc
     3661 gggaggacac tcggcgccgt cggcgtcgac gatccggacc tcgacatcgt cgatagcccg
     3721 acctgaggtg ccggcgatcg tcaccgggtc gtcgtcgtgg cgacacatgg tggcgatgcc
     3781 cgatgcctcg gttagtccgt agccggtgac caccttctcg aatccgagcc gctcgcgcat
     3841 gtcgtggatc atctggacgg ggatggccgc ggcaccggtc accgccagtc gcaacgacga
     3901 gaggtcgagg gcattgatat cgggatggct gaggatcgtc tggtagatgg ctggtgggcc
     3961 ggggagcatg gagatgcgct cctcggccac cctgcgcatg accgacggga cgtcgaacac
     4021 caggtgcggc acgagggtca cgcccttcat gaggcaggcc aggatccccg agttgaggcc
     4081 gaaggcgtgg aagaacgggt tgacgaccag gtagcggtcg ccctcctcga gaccgattac
     4141 gtcgctccat gagaggaacg cccggcagat ggcctcgtgg cggagcatgg cgcccttggg
     4201 ggcaccggtg gtacccgagg tgaacatgat gtgacacagg tcgtcgccgg tcaccgcagc
     4261 ggagcgttcg gcccggtcag catcatcgac ggcatctccg gcggctagaa agttgtccca
     4321 ggcggtgctg ccttcgggta cagcgccacg gagtacgacc acctggtcaa ggtgtgggag
     4381 ccggtcggag agtccggtgg atccctcccc gacctcgttc agcattgcca cgtagtcggt
     4441 gtcgaggaag tccgtgacgg tgaacaggat gcgggctgag gaccgggcca gcaggttgac
     4501 tgcctcacgg cccttgaagc gggtattgac cggcacgagg acggcaccga cacagtgggc
     4561 accgagcgcg gcgacggccc attcggcgag gttgggggcc cacacggcga tccggtcgcc
     4621 gggctggacg tcgtgggcca tgaaggcccg ggccgcggcg tggatccgat cccggtactg
     4681 ggtgaacgtc cagcgtcggt cttcgtcgac gaaggcctca cggtcgccga agcggatggc
     4741 cgcgtcgtcg accaactggg gaatggtgga ccagggggcg ttcaccgggc cgaccctacg
     4801 gtccgcctcc agaccactgg acaaccggga tggtcgacca ccgggtcacc ggatcgaacc
     4861 tgatcatggt gggccttggc ggggacgccg ggacggaacc ggtagtggac gtcgttgccg
     4921 cagtaacgga ccgacacggc ccgtcgacga gacgtggtcg agcggttggg gccggcgccg
     4981 tggagggtgg cagcgtggtg gacgacgatg tcgcccggct caacgacgaa acgtacgagg
     5041 cgggggtcgt caacgtcgat ggtggggacc ggtgtgcctt cggcgccggg gagcggttca
     5101 tcggatacga accagtttgg gcggtggacg aggccagatc ggtgcgagcc gcggaggtag
     5161 gccacggcac ccgtgtcgac ggttaccggg tcgagtggaa cccaggtggt gcagatgcgg
     5221 tcaccttcga ggtggaagta gccgaggtcc tggtggaggg ccgtggcctc ggcggtgccg
     5281 ggttccttga ccagcaccga gtcctcgtag aggtggacgc gttcggcgtc catcagggcg
     5341 gcggcgatgg ccggaagggg cgaggtggcg gcaaaggcgg cgaaggccgg gtcgtggagc
     5401 cagtgatcga cgcccgacag gaaacgaccc ggcccggtgg aatggggctg cgtatcagtc
     5461 acgacggctc ggagcgccgt catgtcggtg gtgatcactg ggtcagcgat cgtggcctcc
     5521 accggttcga cgaggagttc gacccactcg gtggggagga tggccgggag gtggacgacg
     5581 ccgtcacgca caaaagcgtc gatctcgtca tcggtgaccg gccggaacgg ctcggaggtt
     5641 gggcccgaca tggggccggg tgctactcct cttcgtcggg agcggcagcc ggtgcgtcct
     5701 cgtcgtcggg agatgcggcg gtttcttccg cgggggcttc ttcgctgggc gcctcttcag
     5761 cagtttcttc gtctggggtc tcgtcggcgg tttcttccgc gggggc
//
LOCUS       DASCMR010000442         1887 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002153373, whole genome shotgun sequence.
ACCESSION   DASCMR010000442 DASCMR010000000
VERSION     DASCMR010000442.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1887)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1887)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1887
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002153373"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            35..307
                     /locus_tag="QGG16_09995"
     CDS             35..307
                     /locus_tag="QGG16_09995"
                     /inference="COORDINATES: protein motif:HMM:NF012955.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HJP25646.1"
                     /translation="MCFRLEGSPILFSGDTLFPGVPGIPRSRVATSPPSSGPLTDGCL
                     LPFPPKQSSCPGMARTRPSVPSSRSSMSGRTGAGDGRFPTGRRSPV"
     gene            267..653
                     /locus_tag="QGG16_10000"
     CDS             267..653
                     /locus_tag="QGG16_10000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25647.1"
                     /translation="MTDVSLPADDRPFDDSPIHTLDLPDTPIRDRNVPAEAWVEAPDA
                     LLAAAEGIPSADGRPVRIAYKRRLGGWLLWRAGPAKGDARYMAVHADDLDRHLSFRLY
                     ADGTGSGVGADEAVYPRFREWKRSLL"
     gene            728..1522
                     /gene="sufC"
                     /locus_tag="QGG16_10005"
     CDS             728..1522
                     /gene="sufC"
                     /locus_tag="QGG16_10005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012224418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HJP25648.1"
                     /translation="MSTPEIPVPVAPLFEVTDLHASTTDGVEILRGVDLVVQHGEVHA
                     LMGPNGSGKSTLASVLLGSPEYVVTSGSVRFRGDEITDWSPDVRGKAGIFLAFQYPLE
                     ITGVSVINFLRQSLSARKGIDLSVLELRLSIMDWMDRLGMDPSFADRHVNEGFSGGEK
                     KRNEILQMAILEPEMAILDETDSGLDIDALQVVAEGVAEVRSDRPQLGVLAITHYQRL
                     LDKLHPDMVHILVDGRIVERGGPDLAARLEAEGYEAFRPAGSAAGT"
     gene            1537..>1887
                     /locus_tag="QGG16_10010"
     CDS             1537..>1887
                     /locus_tag="QGG16_10010"
                     /inference="COORDINATES: protein motif:HMM:NF012488.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HJP25649.1"
                     /translation="MSATLDVAAIKAEFPLLQREVNDHPIVYLDSGATSQKPQSVLDA
                     MDQYYAEINANIHRGAYLIAERATTAVENSRVALARFLGAPSAEEIVFTKNATEAINL
                     VAYSWGRANLVEGDV"
BASE COUNT          332 a          663 c          570 g          322 t
ORIGIN      
        1 caccatctgc acgccgggcc acaccccggg gtccatctgt ttccgtctcg aaggttcacc
       61 gattctgttc agcggcgaca ccctgttccc gggggtcccg ggaataccac gttcgagggt
      121 ggcgacttct ccaccatcat cgggtccatt gaccgacggc tgtttgctcc ccttcccccc
      181 gaaacagtcg tcatgcccgg gcatggcgcg gacacgacca tcggtgccga gcagccgaag
      241 ctcgatgagt gggcggaccg gggctggtga cggacgtttc cctaccggcc gacgatcgcc
      301 cgtttgacga ctctccgatc cacaccctgg acctgcccga cacgccgatc cgggaccgca
      361 acgtgccagc cgaagcgtgg gtggaggctc ccgacgccct actggccgcc gccgaaggaa
      421 ttccgtcagc cgacggtcgg ccggtccgaa tcgcctacaa gcggcgactc ggcgggtggc
      481 tgttgtggcg ggcgggccct gccaagggcg acgcccgtta catggccgtc cacgccgacg
      541 atctcgaccg ccacctttcg ttccggctct acgccgacgg caccgggtca ggggtaggcg
      601 ccgacgaagc cgtctatcca cggttccgtg aatggaagcg aagcctgctc tgacggggtt
      661 caggaacagg ccgaggatta ccactatcgc catagtggga atgggggcac cctcctagac
      721 tcagatcgtg agcacccctg aaattcccgt acccgtggcc ccactgttcg aggtgacgga
      781 tctccacgcg tcgaccaccg acggcgtcga gatcctgcgg ggcgtcgacc tggtggtcca
      841 gcacggtgag gtccacgccc tcatgggacc caacgggtcc ggcaagtcaa cgctggcctc
      901 ggttcttctc ggaagccccg aatacgtggt gaccagtggt tcggtgcggt tccggggcga
      961 cgagatcacc gactggtcgc ccgacgtgcg tggcaaagcc ggcattttcc tggccttcca
     1021 ataccccctg gagatcaccg gcgtgtcggt catcaacttc ctgcgccagt ccctgtcggc
     1081 ccgcaagggc atcgacctct cggtgcttga acttcgcctc tcgatcatgg actggatgga
     1141 ccgcctcggc atggatccat cgttcgccga ccgccacgtc aacgagggct tctcaggtgg
     1201 cgagaagaag cgcaacgaga ttcttcagat ggccatcctc gaaccggaga tggccatcct
     1261 cgacgagacc gactcgggcc ttgacattga cgcccttcag gtggtggccg aaggtgtggc
     1321 cgaggtccgc agcgaccgtc cccaactcgg cgtgctagcc atcacccact accagcgact
     1381 cctcgacaag ctccatcccg acatggtgca catcctcgtc gacggacgga ttgtcgaacg
     1441 tggtggcccg gacctggccg cccgtctcga agccgagggc tatgaggcat tccggccggc
     1501 cggatcggct gccgggacct gagcccggga ttccccgtgt ccgccaccct cgacgtcgcc
     1561 gccatcaagg ccgagttccc gctgctgcag cgggaagtca acgaccaccc catcgtctac
     1621 ctcgattcgg gcgcaacctc ccagaagccc cagtcagtac tggatgccat ggaccagtac
     1681 tacgccgaaa tcaacgccaa tatccaccgc ggcgcctacc tgatcgccga gcgggccacc
     1741 actgccgtgg aaaactcccg ggtcgccctc gcccggttcc tgggcgcacc ctcggcagaa
     1801 gagatcgtgt tcaccaagaa cgccaccgag gccatcaacc tggtcgccta ctcatggggt
     1861 cgggccaacc tggtggaagg cgacgtc
//
LOCUS       DASCMR010000443         1635 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002155242, whole genome shotgun sequence.
ACCESSION   DASCMR010000443 DASCMR010000000
VERSION     DASCMR010000443.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1635)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1635)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1635
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002155242"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..572
                     /locus_tag="QGG16_10015"
     CDS             <1..572
                     /locus_tag="QGG16_10015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25650.1"
                     /translation="VVVTGVNDGLSDGDQAVDVTLSAVGFEPVVVGVINADNDGGPQL
                     VVSSSSDSNGDSCPEPPAEEPVDEPVEEEEVEDVLPACVVGFGSLVESEGSTVMSESG
                     SSDSFTFALGSEPAGDVVVSVASSDLSEAVVLASALTFTASNWDTPQTVVVTGVNDGL
                     SDGDQAVDVTLSAVGFEPVVVGVINADND"
     gene            677..>1635
                     /gene="argC"
                     /locus_tag="QGG16_10020"
     CDS             677..>1635
                     /gene="argC"
                     /locus_tag="QGG16_10020"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012226824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HJP25651.1"
                     /translation="MYKIAIIGASGFTGAELLRLCAGHPDFEVAIATGETQAGTAVAD
                     LYPSLAAHYPDLSYTPADPAAVDGCDVTFLGLPHGASQALVPELLDRVGHVVDLAADF
                     RLRDATLYPIWYGEDHEVPGLLDEAVYGLPELFRSDLAGARLVAAAGCYPTASALALV
                     PFVRAGAIDPAGLVVGAASGVSGAGRPPKPNTSFCTVDEDYTAYGLAGHRHAPEIEQV
                     LSTRADGTTVDGVSVIFTPHLAPMNRGILATCYARPTGDLDTDGALTLLAEAYAGEPF
                     IVVDERSPSTKATLGSNAAHLTARVDPRTGWVVVLCAIDNIVKG"
BASE COUNT          257 a          514 c          543 g          321 t
ORIGIN      
        1 cggtggtggt gaccggcgtg aacgacggtc tttctgatgg cgaccaggcg gtggatgtga
       61 ccctttcggc tgtcgggttc gaaccagtcg tcgttggtgt gatcaacgcc gacaacgacg
      121 gtggccctca gctggtcgtg tcgtcctcgt ccgactcaaa cggtgattcc tgcccggaac
      181 cacctgccga agaacccgtc gacgaaccgg tcgaagaaga agaggtcgag gacgtgttgc
      241 cggcttgtgt tgtcgggttc gggtcgttgg tggagtcgga gggttcgacg gtgatgtcgg
      301 agtcgggttc ttcggactcg tttacgtttg ctctggggtc tgagccggcc ggtgacgtgg
      361 ttgtttcggt ggcgtcttcg gacctgtctg aggcggtggt gttggcttcg gcgttgacgt
      421 ttactgcgtc gaactgggat acgccccaga cggtggtggt gaccggcgtg aacgacggtc
      481 tttctgatgg cgaccaggcg gtggatgtga ccctttcggc tgtcgggttc gaaccagtcg
      541 tcgttggtgt gatcaacgcc gacaacgact aaagacgcca cgtcaaacga tgaggcattc
      601 tgccgctgac ctgcagatat gcggaaatct ggatagatat gttggattag tatgcagcag
      661 atagcataat tgagacatgt ataagatcgc catcattggg gcctccggat ttaccggcgc
      721 cgagctcctt cggttgtgcg ccggccaccc cgactttgag gtggccatcg ccaccggaga
      781 gacccaggcc ggtaccgcgg tggccgacct ctacccgagc cttgccgccc actatccgga
      841 cttgtcgtac acgccggcag acccggcggc tgtcgacggg tgcgatgtga ccttcctggg
      901 cttgccccac ggggcctccc aggctctggt gcccgagctt ctcgaccggg tgggccacgt
      961 tgtcgacttg gccgccgact tccgactccg ggacgccacc ctgtacccga tctggtacgg
     1021 cgaggaccat gaggtaccag gcctgctaga cgaagccgtc tacggcctcc cggaactctt
     1081 tcggtccgac ctggctggtg cccggttggt ggccgctgcc ggctgctatc ccaccgcctc
     1141 ggcgctggcc ctagtgccct tcgtgcgggc cggtgccatc gaccctgctg gcctggtagt
     1201 cggcgcggcc agcggcgtgt cgggagccgg tcggcccccg aagcccaaca ccagcttctg
     1261 cacggtcgac gaggactaca cggcctacgg cctggccggc catcggcatg ccccggagat
     1321 cgaacaggtc ctcagcaccc gggccgacgg gaccaccgtg gacggcgtgt cagtcatatt
     1381 caccccccac ctggcgccca tgaaccgagg cattctggcc acctgctatg cccggccgac
     1441 cggtgacctg gacaccgacg gggccctaac cctcctggcc gaggcctacg ccggcgaacc
     1501 gttcatcgtg gtggacgagc gatcaccgtc taccaaggcc accctcggat ccaacgccgc
     1561 acacctgacg gcccgggtgg acccgcggac cgggtgggtg gtggtgctgt gcgccatcga
     1621 caacatcgtg aaggg
//
LOCUS       DASCMR010000444         1531 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002158647, whole genome shotgun sequence.
ACCESSION   DASCMR010000444 DASCMR010000000
VERSION     DASCMR010000444.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1531)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1531)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1531
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002158647"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..728
                     /gene="recF"
                     /locus_tag="QGG16_10025"
     CDS             <1..728
                     /gene="recF"
                     /locus_tag="QGG16_10025"
                     /inference="COORDINATES: protein motif:HMM:TIGR00611.1"
                     /note="All proteins in this family for which functions are
                     known are DNA-binding proteins that assist the
                     filamentation of RecA onto DNA for the initiation of
                     recombination or recombinational repair; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0009432 - SOS response [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="DNA replication and repair protein RecF"
                     /protein_id="HJP25652.1"
                     /translation="LHLVKGSPGERRGWIDDLLVDLHPRNHALRSDLDRILRQRNTLL
                     KQAKGHLSTEVETTLDVWDAQLGDLGERLATARRETLVALGPRVDELSDALTDGSSRL
                     TMKVVDQWSSEGLEKALNRARSNDVRRGVTTVGPHRDDVLLTLDDMPSRTHASQGEQR
                     SIALALRLAGHRLVAEQTGAEPIVLLDDVFSELDPRRCVVLVGLLPSTQAVITSAGAV
                     PEGVEAGVVLHLDDGEFVSQIGP"
     gene            725..1039
                     /locus_tag="QGG16_10030"
     CDS             725..1039
                     /locus_tag="QGG16_10030"
                     /inference="COORDINATES: protein motif:HMM:NF017103.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF721 domain-containing protein"
                     /protein_id="HJP25653.1"
                     /translation="MKPDRGPVALRWSLERLLAGMGAPQIDDTMMIIDQWPEIVGARL
                     AERIEAVAVSGSELLVAVHDPAWASQVAWLEAQLLERVEALVGPGKITSVRARVQPRE
                     GP"
     gene            1212..>1531
                     /locus_tag="QGG16_10035"
     CDS             1212..>1531
                     /locus_tag="QGG16_10035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012223523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HJP25654.1"
                     /translation="MTTAETSYGAADITVLEGLEAVRKRPGMYIGSTGPTGLHHLVWE
                     VVDNSVDEAMAGHCTTIEVTLSEDGSCEVSDDGRGIPVGLHHQYEELTAAEVVLTVLH
                     AGGK"
BASE COUNT          290 a          426 c          499 g          316 t
ORIGIN      
        1 accttcacct ggtcaagggc agcccgggag aacggcgggg ctggatcgac gacctgctgg
       61 tcgatctaca cccacgtaat catgcgctta ggagtgacct ggatcggatc ctccgacagc
      121 gaaacacgtt actcaaacag gccaagggtc acttgtcgac tgaggtggag accacgttgg
      181 acgtctggga cgcccaactg ggagacttgg gagaacgctt ggcgaccgct cgacgggaaa
      241 ccctcgtggc tctcgggccg agggttgatg aactttccga cgcactcacc gatgggagta
      301 gtcgtctcac gatgaaagtg gtggatcagt ggtcctcaga gggactggag aaggcattga
      361 accgggcacg gtccaatgac gtccgacgcg gtgtgaccac ggtcggtcct catcgagatg
      421 atgtgctcct gactttggac gatatgccgt cgagaaccca tgcttcccag ggggagcagc
      481 gctcgatagc cctcgccctc cgtcttgccg gtcatcgtct ggtggctgaa cagacgggtg
      541 cagaaccgat tgttctgctc gatgatgtgt tctcagaact tgatcctcga cggtgtgttg
      601 tcctagtcgg gttgctgcca tcgacccagg cagtgattac ctcggctgga gcggttcctg
      661 aaggagtaga agctggtgtc gtccttcatc tagacgacgg cgagttcgtt tcccaaatag
      721 gaccatgaag cctgatcgcg ggccggtggc ccttcgatgg agtttggaac ggctgttggc
      781 tggcatggga gcaccgcaga tcgatgacac catgatgatc atcgatcagt ggccggagat
      841 cgtgggagca cggttggccg agcggatcga agctgtcgcg gtgagtggat cagagctcct
      901 ggtcgccgtt cacgacccgg cctgggctag ccaggttgcg tggctggagg cccagttgtt
      961 ggagcgggtt gaggccctgg ttggaccagg gaagatcacc tcggttcggg ctcgagtcca
     1021 gcctcgtgag ggaccctgag ggagcatatt ttgcacctga tcgacaccgc ttggatccgt
     1081 ggtcgggagg ccattggctg gtagtctggt caaaccgtga agatgcgctc tgacctgcgg
     1141 ttttataccg ctttgacccg tcttttggca cctttcttcc ccgacccgac gatccaaggg
     1201 gaacggctcc cttgactacc gcagagacgt cctacggcgc agccgatatc accgtccttg
     1261 agggcctcga agccgtccgg aaacggcctg gcatgtacat cggatcgacg ggtcccaccg
     1321 gcctccacca cttggtgtgg gaggtcgtag acaactcggt tgacgaagcg atggctggcc
     1381 actgcacgac catcgaggtg accctcagcg aggacgggtc gtgtgaggtt tcagatgatg
     1441 gtcggggaat tcccgtcggc ctccaccacc agtatgaaga gctcacggcc gccgaggtcg
     1501 tgctcacggt gctccacgcc ggaggcaagt t
//
LOCUS       DASCMR010000445         3593 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002160948, whole genome shotgun sequence.
ACCESSION   DASCMR010000445 DASCMR010000000
VERSION     DASCMR010000445.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3593)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3593)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3593
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002160948"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1597
                     /locus_tag="QGG16_10040"
     CDS             <1..1597
                     /locus_tag="QGG16_10040"
                     /inference="COORDINATES: protein motif:HMM:NF012706.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HJP25655.1"
                     /translation="SNANVVYEYAPAGSSQGSGDLVAPVIPVRGGTLVMATSQVGAGI
                     NHGVASGVGIGNVSSKVFASLVHLDANWHPQPYLAESWDVSDDQMTVTLNLVDGATFH
                     DGMPITSADVKFSIEVVKNNHPFTGMWAPVNSIDTPDDLTVVLHLDNPHPALWIAMSD
                     VLMPIMPKHIMDDGTAINEMKGHPNNTAALEGDLIAVGSGPFRLTEWNNTEKIVMDAY
                     EDFFIPGRPYLDSIIYVITPNEDTMMLGLESGEFDTGGYASVTNADKVANNSNLVANP
                     DELSGVGSLNHLQFNMANDVISDLRVRQAIAYTIDRDFIINNLHQGQTSELLGGIHPS
                     SPFYNPNVERYDVDLDKARSLLAEAGYADGLELRIHYIPGPNEQQLYVAEYIALALAE
                     VGVDVEVVQSADLPSWAGMFFGGPDAWQMTMNAYFNWGDPVIGVQRAYVCANIKPGVF
                     VNNSAYCNEKVDELLYAAAAETDFDARKALYDEFQEITAVELPFYGINALPIYGAHQT
                     YVMNMPLGTWGSLSGMENVWIDK"
     gene            1640..2626
                     /locus_tag="QGG16_10045"
     CDS             1640..2626
                     /locus_tag="QGG16_10045"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP25656.1"
                     /translation="MTALARGIGSRIGQAIGLLLAVVVVVFFLIQIAPGDAALYLAGD
                     QGVGDAEFLAQVRAEYGLDQPLLVQLGTYVGNVAQLDLGDSIYFNEPVLRLIVERLFA
                     TVLLAGTSLLFAVGLGVAIGVYTARRPESPMSSAATVTSLVGFSTPVFYSAIMFIVLF
                     AAKWSLLPVGGIEDVRYDGNWVGETIDLLQHLILPALSLGIIYLAIYSRLARASMLEV
                     LESDYIRTARAKGARERVVVYKHALRNAIIPVVTAAGLQVGNLLSGALLVEVVFAWPG
                     IGRLAVDSIFRRDTPTLLGIMIFSSAMVIVANLLTDLVYRLIDPRIRVGGSR"
     gene            2623..3498
                     /locus_tag="QGG16_10050"
     CDS             2623..3498
                     /locus_tag="QGG16_10050"
                     /inference="COORDINATES: protein motif:HMM:NF012738.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HJP25657.1"
                     /translation="MTDFGVAIEQVEAGGRGALRMFLRNKAAAVGLVVFSLIVLITIF
                     GPGLYGTSANKMVARPFLGPGSDLAPPLGTDYLGRDILAGIIGGGRATLVVAAVAAAM
                     TMTIGILVGSLAGYFGGWIDSLLMRFTEIFQVMPGLLFSMVVIFLLGPGTRNETLAIG
                     LTLWPLAARLARAEFLKLRELEYVKAARAIGCSDLRIMFRTILPNAMPPLLVSATLTV
                     VIAILFHSGLAFLGMVDVNTISWGSMLGKNRGYALTAWWMVFFPGIAIVITGLSISLV
                     GDGLQDAFNPKLRGR"
BASE COUNT          701 a         1128 c         1025 g          739 t
ORIGIN      
        1 gtccaacgcc aacgtcgtct acgagtacgc cccagctggt tcgagccagg gttcgggcga
       61 tctggttgct ccagtaatcc cagtgcgcgg tggcacgctg gtgatggcta cgtcccaggt
      121 tggggcgggc atcaaccacg gagtggcatc cggagtcggt attggcaacg tgagttcgaa
      181 agtcttcgcc tcactggtcc acctcgacgc caactggcat ccccagccgt acctggctga
      241 gtcttgggat gtatcggatg atcagatgac cgtcaccctg aaccttgtgg acggagcgac
      301 cttccacgac gggatgccga tcacgtcagc ggacgtgaag ttctcgatcg aagtggtcaa
      361 gaacaaccac ccgttcaccg ggatgtgggc cccagtcaac tcaattgaca cgccggacga
      421 cctcacggtg gtgctccacc tggataaccc gcaccccgcg ctgtggatcg ccatgtcaga
      481 cgtactgatg ccgatcatgc cgaagcacat catggatgac ggcacggcga tcaacgagat
      541 gaaggggcat ccaaacaaca cggccgccct ggagggtgac ttgatcgcgg tcggttccgg
      601 tccgttccgt cttaccgagt ggaacaacac cgaaaagatc gtgatggacg cctacgagga
      661 cttcttcatc cccggtcgcc cctacctcga cagcatcatc tacgtcatca ctcccaacga
      721 ggacacgatg atgctgggtc ttgagtccgg ggagttcgac acaggtggct atgccagcgt
      781 gactaacgca gacaaggtgg ccaacaactc aaacttggtc gctaatcctg acgagttgag
      841 cggcgttggt tcgctgaacc atctccagtt caacatggca aacgacgtca ttagcgatct
      901 gcgggtgagg caggcgatcg cctacaccat cgatcgggat ttcatcatca acaacctgca
      961 ccagggccag acctcggagt tgctgggtgg catccacccg tcaagcccgt tctacaaccc
     1021 gaacgtagag cgctacgacg tagacctgga caaggctcgc tcactgcttg ccgaagccgg
     1081 ctacgccgac ggtctggagt tgaggatcca ctacatccca ggtccgaacg aacagcagct
     1141 ctacgtggcc gagtacatcg ctctggcact cgcagaggta ggcgtcgatg tagaggtcgt
     1201 ccagagtgcc gaccttccgt cgtgggccgg catgttcttc ggcggtccag atgcctggca
     1261 gatgacgatg aacgcctact tcaactgggg cgacccggtt atcggtgtcc agcgggccta
     1321 cgtctgcgcc aacatcaagc caggcgtgtt cgtcaacaac tcggcttact gcaatgagaa
     1381 ggtcgacgag cttctctacg cagcagcagc cgaaacggac ttcgacgccc ggaaggcgct
     1441 ctacgacgag ttccaggaga tcaccgcagt ggagttgccg ttctacggca tcaacgcgct
     1501 gccgatctac ggagctcacc agacctacgt catgaacatg ccgcttggga cgtggggctc
     1561 gctctccggc atggaaaacg tctggatcga caagtaggca tcggcttata gctgagacat
     1621 aaaccaatag agacgagagg tgacggcgct cgcccgggga atcgggagca gaataggaca
     1681 agcgattggg ctgctactgg cagtcgtggt cgtcgtgttc tttctgatcc agatcgcccc
     1741 gggtgacgcc gccctctacc tcgccggtga ccaaggcgtc ggtgacgccg agtttctcgc
     1801 ccaggtccgg gccgaatacg gactagacca accgcttctc gtccagttgg ggacctacgt
     1861 cggtaacgtc gcccaacttg acctgggcga ttccatctac ttcaacgagc cggtcctccg
     1921 cctgatcgtc gagcgactct tcgctacggt gctgctggcc ggcacttcac ttctcttcgc
     1981 agtggggctg ggtgtggcca tcggcgtcta caccgcccga cggcccgaaa gcccgatgtc
     2041 ttcggccgca acagtgacga gcctggttgg gttttccaca ccagtcttct actcggccat
     2101 catgtttatc gtcctctttg ccgcaaagtg gagcctgctc cccgtaggtg gtatcgaaga
     2161 tgtccgctac gacggcaact gggtcggcga aaccatcgac cttcttcagc acctcatcct
     2221 cccggcgctc agtctcggga ttatctatct agcgatttac tcccggctgg ctcgagcttc
     2281 gatgctcgag gtactggagt ccgactacat ccgcaccgcc cgggcgaagg gcgcccgtga
     2341 gcgagtcgtt gtttacaaac acgcccttcg gaacgccatc attcccgtag taaccgccgc
     2401 cggactccag gtcggaaacc tattgtccgg cgccctactc gtcgaggtcg tattcgcctg
     2461 gcctggaatc ggaagactgg cagtcgactc aatcttccgg cgtgacactc cgacgctgct
     2521 cggcatcatg atcttctctt cggccatggt catcgtggcc aacctgctca cagatcttgt
     2581 ctaccggctc atcgatcccc gaatacgcgt cggagggtcc cgatgaccga cttcggcgta
     2641 gccatcgaac aagtcgaagc tggcggccgg ggagccttgc gtatgttcct tcggaacaag
     2701 gcagcagccg tgggcctggt cgtattctcc ctaatcgtcc tgataaccat cttcggcccc
     2761 ggcctctacg ggacaagcgc aaacaagatg gttgccagac cgttccttgg ccccggcagc
     2821 gacctagccc cgccactggg aaccgactat ctgggccggg acattctggc cggaatcatc
     2881 ggaggaggcc gggcaactct ggtggttgct gcggtagccg ccgccatgac tatgaccatc
     2941 ggcatcttgg tcggaagcct ggccggatac ttcggcgggt ggatcgactc cctactcatg
     3001 cgattcaccg aaatctttca ggtaatgccg gggctcctct tctcgatggt cgtcatcttc
     3061 ctgcttggcc ccgggactcg aaacgagacc cttgccattg gcctaacact gtggccgcta
     3121 gcagcccgcc ttgcgcgtgc cgagttcctc aagttgagag aactggagta tgtgaaggct
     3181 gcccgtgcca tcgggtgcag cgacctacgg atcatgttcc gcacgatcct gcccaatgcc
     3241 atgcctcctc tactggtgtc agccaccttg acggtggtca ttgccatcct cttccactcc
     3301 ggactggcct tcctcggcat ggtggacgtc aacacgatta gttgggggtc gatgttgggc
     3361 aagaatcggg gctacgcact gaccgcatgg tggatggtct tcttcccggg catcgcaatc
     3421 gtgatcaccg gactcagcat cagcctcgtc ggcgacggcc tacaagacgc ctttaacccg
     3481 aagctccgag ggcgctgatg cccctcctct cagtctccga ccttacggtc accttcgacg
     3541 atttcactgc cgtggactct gcgaacttcg ccatcgaacc cggtgagacg ctg
//
LOCUS       DASCMR010000446         1593 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002171033, whole genome shotgun sequence.
ACCESSION   DASCMR010000446 DASCMR010000000
VERSION     DASCMR010000446.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1593)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1593)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1593
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002171033"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..575
                     /locus_tag="QGG16_10055"
     CDS             <1..575
                     /locus_tag="QGG16_10055"
                     /inference="COORDINATES: protein motif:HMM:NF019758.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25658.1"
                     /translation="FDVLSARGMVDGWSLTNRGQPLTQIHNEADLLVAEVLDAGILRG
                     LSPSMTAAVVSCLTYRKRGPGAPSTVRLSAPFPDCFDRLTELAGVVAAAEIAAGLKPA
                     DLPDPGFAHCVHAWAGGAELGDVLDDDLPAGEFVRNVRLVADLLRQVAATAGSEVAAA
                     ALEAQEGIDRGVIAMSSGRVDSEGSSEPPI"
     gene            575..1195
                     /locus_tag="QGG16_10060"
     CDS             575..1195
                     /locus_tag="QGG16_10060"
                     /inference="COORDINATES: protein motif:HMM:NF039905.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25659.1"
                     /translation="MGVVRGEDWGVVGPVPSDALTASSDGELADLLPGILRERPDVGA
                     LPGPVVALTDGDLCRTLGGRGRARPGGEATLVDVDVGEALLDGRLHRFVAHLVVRPNR
                     HPGRWWVAANAAHRGGWNVAPRAHPGDGLLDVLDASVPLGQVPAAWRRLSRGVHVPHP
                     AIRQERTAAIQATFDRPAVVEVDGRPVGRVSVLSIRVRSGVLRLAI"
     gene            1260..>1593
                     /locus_tag="QGG16_10065"
     CDS             1260..>1593
                     /locus_tag="QGG16_10065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25660.1"
                     /translation="MDTPDHHPLPDDLVAEARTRVCDRVDELAERLVATSHAIHAEPE
                     LNFEEHVAHELLTNVLAEEGLPVVRGAYGLETAFEADAGTEGPVLAVLCEYDALPGIG
                     HACGHNVIA"
BASE COUNT          247 a          506 c          553 g          287 t
ORIGIN      
        1 ccttcgacgt cctgtcggca cggggaatgg ttgatggatg gtcgttgact aaccgcggtc
       61 agccactcac ccagatccac aatgaggccg acctgctagt ggccgaggtc ctcgacgcag
      121 gaatccttcg gggcctaagc ccctcgatga ctgcggcggt cgtctcctgt ctcacctacc
      181 gaaagcgtgg gccgggtgcc ccttcgacgg ttcggctttc tgctcccttt cccgactgtt
      241 tcgaccgact caccgaattg gccggggtgg tggccgccgc cgagatagcg gccggactga
      301 agccagcgga tctgccggac ccgggattcg cccactgcgt tcacgcgtgg gcgggtggag
      361 cggaattggg tgacgtcctt gacgatgatc tcccagctgg cgagttcgtg cgaaacgtac
      421 gtctagtggc tgatctcctc cgacaggtcg cggcgaccgc aggatccgag gtggccgcag
      481 cggcactcga ggcccaggag ggcatcgacc gtggggtgat cgccatgtcc tcgggcaggg
      541 tggactctga gggaagttcg gaaccgccca tctgatggga gtggtacgtg gcgaggactg
      601 gggagtggtc ggcccggtcc ccagcgacgc cctcacggcc tcatccgatg gtgagctcgc
      661 tgacctactg cctggcatcc tccgagagag gcccgacgta ggagcgctgc ccggcccggt
      721 tgtggccttg acggacggtg acctctgccg gaccctgggt gggcggggcc gggcacgacc
      781 gggcggcgaa gcgaccctgg tggacgtcga cgtgggcgag gcactcctag atggacgcct
      841 gcaccgattc gtggcccatc tggttgtccg cccaaatcgt catccgggtc gctggtgggt
      901 ggccgccaac gccgcccatc gtggcggctg gaatgtggca ccccgggccc accccggcga
      961 cgggctactc gacgtccttg acgcctcggt accgcttggt caggtcccgg cggcctggcg
     1021 ccgcttgagc cggggcgtgc acgtgcccca cccagcgatc cggcaggaac ggactgcggc
     1081 gatccaggcc actttcgatc gaccggcggt cgttgaggtc gatggccggc ccgtcgggcg
     1141 ggtaagcgtc ctatcgatcc gggtacggtc cggggtcctt cgcctggcaa tctgaggcac
     1201 ccccgccagc caatcctccg atcggaaacg gtgatcggac tggtggctac gctcaacaga
     1261 tggacactcc cgaccaccat cccctcccag atgatctcgt ggctgaagcc cgtacacggg
     1321 tctgtgaccg ggtcgacgaa ctggccgaaa ggttggtggc cacctctcat gccattcatg
     1381 ctgaaccgga gctgaacttc gaggagcacg tcgcccacga actgttgacg aatgtgctgg
     1441 cggaagaggg gctgccggta gtccgtggtg cctatggctt ggagacggcg tttgaggcgg
     1501 atgcagggac cgagggcccg gtgctcgctg tgctctgtga gtacgacgcc ctgccgggga
     1561 tcggtcatgc atgtggccac aacgtgattg cta
//
LOCUS       DASCMR010000447         1739 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002173228, whole genome shotgun sequence.
ACCESSION   DASCMR010000447 DASCMR010000000
VERSION     DASCMR010000447.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1739)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1739)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1739
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002173228"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..591)
                     /locus_tag="QGG16_10070"
     CDS             complement(<1..591)
                     /locus_tag="QGG16_10070"
                     /inference="COORDINATES: protein motif:HMM:NF013718.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HJP25661.1"
                     /translation="MGSRRWAPVALVSASVASTFAARGNGPFAGETGVTLWIHRNSPG
                     PVDRIGDVLEPLFNDLAAPTMFAATCLFVWWRWGLRAIAVLGLAGALTGLTRVGDLVQ
                     RPRPTASGSWSSYAYGNGGYPSGHVVFVALISGTLAILARRHGSTATATWVAVVGVTL
                     TVVTSWTRVSHLEHWPLDVVGGLTMAGAALYGVAAFD"
     gene            complement(761..1444)
                     /locus_tag="QGG16_10075"
     CDS             complement(761..1444)
                     /locus_tag="QGG16_10075"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25662.1"
                     /translation="MVVGDSVTYEIEPALTAALQRTGRVVSANRTQVGFGLSRWPVYQ
                     WWEIWLPFLDEVRPEAVIVQTGIWDVSDVWGSDDRIPKPEDPDWEDSFAFLVRMAVDV
                     LSADGAHVYWLTMLPSPESDGPARLTRLLLEVAAGDDRLSIIDLTPSFTDNEGQYIDE
                     IDRSGEPWPIRKIDGVHLCREGAALAARSTTEAVLADAGLNIFPGWEKGLWRANPLYD
                     VDPCDDPVN"
     gene            1509..1670
                     /locus_tag="QGG16_10080"
     CDS             1509..1670
                     /locus_tag="QGG16_10080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25663.1"
                     /translation="MPLPEIVVVAGVVVAGVVVAGVVVAGVVVDGVVVAVGRAATWRT
                     RSDKASTRV"
BASE COUNT          309 a          537 c          589 g          304 t
ORIGIN      
        1 atcgaacgcg gccacgccgt agagggcggc tcctgccatc gtgaggcctc caaccacgtc
       61 gagtggccag tgctccagat ggctcaccct tgtccaggag gtcaccacgg tgagtgtcac
      121 gcctactaca gcgacccacg tggccgtcgc tgtcgatccg tgccgacgag ccagaatcgc
      181 caacgtgccg gagatgagcg ccacgaagac cacgtgccca ctggggtagc cgccattgcc
      241 gtaggcgtaa ctgctccagg atcctgacgc ggtcgggcgg ggtcgctgta cgaggtcacc
      301 cacgcgagta aggccggtaa gggcgcctgc cagtccgagc accgcaatgg cccgcagccc
      361 ccagcgccac cagacgaaca ggcaggtggc ggcgaacatg gtcggtgctg ccagatcgtt
      421 gaataacggc tcgagtacgt cgccgattcg atctaccggt ccgggcgagt tgcggtggat
      481 ccagagggtc accccggttt caccggcgaa cggtccgttg ccacgtgctg cgaacgtcga
      541 ggcgaccgac gcggagacaa gcgctaccgg tgcccatcgc ctcgaaccca tgtcgccctc
      601 ccgccattac cggaactatt ggagccggtc gaacggttgg agaataggcc ggtgggcccg
      661 accgtggaac ggatgtcggg tcgcatgcag gtctctcgcc gggtgctgtt tcaggactcc
      721 gagctggagc tcgcgttctt ctggctacgc ggacacggag ttagttgacg gggtcgtcac
      781 atgggtccac gtcgtagagc ggatttgccc gccagagtcc cttctcccaa ccgggaaaga
      841 tgttcaggcc tgcatcggcg aggacggctt cagtggtgct ccgtgctgcc agagcagcgc
      901 cctcccggca gaggtgcaca ccgtcaatct ttcgaatcgg ccatggctcg ccggaccggt
      961 caatctcgtc tatgtactgg ccctcgttgt cggtgaagct gggcgtgagg tcgataatcg
     1021 acaaccgatc atcgcctgcg gccacttcta ggagcaggcg cgtaaggcgg gcgggtccgt
     1081 ctgattcggg tgaaggaagc attgtcagcc agtaaacatg tgcgccgtcg gccgatagca
     1141 cgtcgaccgc catccggacg aggaaggcga acgaatcctc ccagtcggga tcctctggtt
     1201 tcggaatgcg gtcatcgctg ccccagacgt cgctgacgtc ccagatcccg gtctggacga
     1261 tgaccgcctc gggccggacc tcatcgagga acgggagcca aatctcccac cactggtaga
     1321 cgggccaccg actgaggccg aacccgacct gggtccggtt ggccgaaacg acccggcctg
     1381 tgcgttggag tgcggcggtg agggcgggtt cgatctcgta ggtgacgctg tcgcccacca
     1441 ccatgacccg gagggggtcc tcggaagtcg gtgaacgcag aagcagagtc tccttcgggg
     1501 ggacggagat gccgctcccg gagattgtcg tggtcgccgg agtcgtggtc gctggagtcg
     1561 tggtcgctgg agtcgtggtc gccggagtgg tggttgacgg agtggtggta gccgtaggac
     1621 gggctgccac ctggcggacc cgatcagaca aggcatcgac tcgggtctga agctcgacga
     1681 catctgcttt cattccgtcg aggtcgacgg gggtggcaca gctcacgccg ctgatcacg
//
LOCUS       DASCMR010000448         3218 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002176081, whole genome shotgun sequence.
ACCESSION   DASCMR010000448 DASCMR010000000
VERSION     DASCMR010000448.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3218)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3218)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3218
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002176081"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..610)
                     /locus_tag="QGG16_10085"
     CDS             complement(<1..610)
                     /locus_tag="QGG16_10085"
                     /inference="COORDINATES: protein motif:HMM:NF012955.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HJP25664.1"
                     /translation="MTDPSCSHTDQPQDRPVRQEQEPASTEVTELASGLYRLQLPISM
                     PGLGHVNCYALEDTDGFTLVDPGLPSLESWNALGHLLAQLGTDHSRVHTAVVTHSHPD
                     HFGGVHRLRDDHGTRVLTHADFRSVWMDMAIDEEMDSGDLDLADDEDLERVRSMMSRP
                     TPWGATRSAPPATELRKWSEMDVTGGSKSWRVPEPSDTVVDGE"
     gene            complement(682..1227)
                     /gene="orn"
                     /locus_tag="QGG16_10090"
     CDS             complement(682..1227)
                     /gene="orn"
                     /locus_tag="QGG16_10090"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000175 - 3'-5'-RNA exonuclease activity
                     [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HJP25665.1"
                     /translation="MLAWMDLEMTGLDLESDVIVEIATLVTDDDLTIVAEGPDLVVHQ
                     PPEVLDRMGDFVRTMHTKSGLLDAITASSTTLAEAGDATMAFLKQHIPEAQTVPLCGN
                     SIGTDRRFLLRWLPEIEEFLHYRSVDVSTVKELARRWHPEAVKSAPEKAGGHRAMDDI
                     RESVAELRHYRAALFPSSPDA"
     gene            1323..1760
                     /gene="dut"
                     /locus_tag="QGG16_10095"
     CDS             1323..1760
                     /gene="dut"
                     /locus_tag="QGG16_10095"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015443384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HJP25666.1"
                     /translation="MLKIPLLRLVDDLPLPTYAREGDAGADLVAAEDVTLAPGGGRAL
                     VSTGAAIAIPWGYAGFVQPRSGLALKHGVTCLNTPGLIDSGYRGELKVLLVNTDPTDP
                     FEVVRGERIAQLVIQRVEECRFAEVDELPPSERGEGGFGSTGR"
     gene            1784..2455
                     /locus_tag="QGG16_10100"
     CDS             1784..2455
                     /locus_tag="QGG16_10100"
                     /inference="COORDINATES: protein motif:HMM:NF019846.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HJP25667.1"
                     /translation="MIEELPGLDGVDEGTRGTVVNHRMREVTELVAGAGVEAGTWDGS
                     LVGEVRTLFDSLAPDWTATRDHPSRNAPLLDALDRGAVAGRTVLELGAGTCISARDLR
                     DRFDCYVAADLSWGMLSHAVDGAPPLMCADGSALPLADSIVDVLILQNMFLFAAEVDR
                     CLADDGFVVWVNSRGPETPIHLSCEAVVASLESATGSSWRAVTSTVGEATWAVVRRES
                     RNAAR"
     gene            complement(2436..2723)
                     /locus_tag="QGG16_10105"
     CDS             complement(2436..2723)
                     /locus_tag="QGG16_10105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25668.1"
                     /translation="MARSSQRDDLEAVTLRLPASRPVGDLPRVGLASLLRIHRIEPSE
                     IGDLASSLQEMAAEMTGAGSDVVIDYRVSASEVAIDLTGDGRTLRISAPRS"
     gene            2820..>3218
                     /locus_tag="QGG16_10110"
     CDS             2820..>3218
                     /locus_tag="QGG16_10110"
                     /inference="COORDINATES: protein motif:HMM:NF024621.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4031 domain-containing protein"
                     /protein_id="HJP25669.1"
                     /translation="MTVLVDEAVWPWRGARWAHLVSDESVAELHAFARRLGLRRMAFQ
                     GDHYDIPTDVRERALALGAEAVRGRDLVRRLRAAGLRLAAPDRPGSWEEVGRWSAPGS
                     RPDLGSMDLVVPGDLAEAFQGVDARWTSVDV"
BASE COUNT          486 a          973 c         1187 g          572 t
ORIGIN      
        1 cctcgccgtc gaccaccgtg tcggacggct cggggacacg ccatgacttc gatccaccgg
       61 tcacgtccat ctccgaccac ttgcgaagtt cagtggccgg tggtgcggat cgggtagcgc
      121 cccatggggt ggggcggctc atcatggatc ggacccgttc gaggtcctcg tcgtcggcca
      181 gatccaggtc gccggagtcc atctcctcgt cgatcgccat gtccatccac accgatcgga
      241 agtcggcgtg ggtaaggacc cgggtgccgt ggtcatcgcg gagacggtgt acaccgccga
      301 agtgatcggg gtgactgtgg gtgaccaccg cggtgtggac ccgactgtgg tcggtgccca
      361 gctgagccag aaggtggccg agggcgttcc acgactcgag gctgggcagg ccggggtcca
      421 ccagggtgaa tccgtcggtg tcctcaagcg cgtaacagtt gacgtggccg aggccgggca
      481 tcgagatagg gagctgaagc cggtatagcc cggaggccag ttcggtgacc tcggtcgagg
      541 ctggttcctg ctcctgccgg accggccgat cttgtggctg atcggtatgg gaacaggagg
      601 ggtcggtcac ggcgtcacca taggaggggg cctctgaacg ggcccaagcg gcgctgggcc
      661 agcaatgggc gccggacgag ttcaggcgtc gggcgaggag ggaaagagcg ccgctcggta
      721 gtggcgcagt tcggccaccg attcccggat gtcgtccatg gcccggtggc cgccggcctt
      781 ctcgggtgcc gacttgacgg cctccgggtg ccagcgccgg gctagttcct tgacagtcga
      841 cacgtcgacc gaccggtagt gcaggaactc ctcgatctcg ggaagccaac ggagtaggaa
      901 gcgtcggtcg gtaccgatcg agttgccgca cagcggcacg gtttgggctt cgggaatatg
      961 ttgcttgagg aaggccatcg tggcatcgcc agcttcggcc aacgtggttg acgaggcggt
     1021 aatggcgtcc agcaggccgc tcttggtgtg catggtcctc acgaagtcgc ccatgcggtc
     1081 cagaacctcg ggtggctggt ggaccaccag gtccgggccc tcggccacga tggtgaggtc
     1141 gtcgtcggtg accagggtcg cgatctcgac gattacgtcg gactcgagat ccagtccggt
     1201 catctcgagg tccatccatg ccagcacggc gccgatccta ggtcgtcgtg ccttgcctca
     1261 gtccggcgcc agcccgggac cagccggtga gtgggctggg gtcgggggct agggtcgccg
     1321 ccgtgctcaa gattcccctg cttcgactgg tcgatgacct gccccttccg acctatgccc
     1381 gcgagggtga cgctggagcg gatctggtgg ccgccgagga cgtcacgttg gcgcccggcg
     1441 ggggtcgcgc cctggtgtcc accggcgcgg ccatcgccat cccttggggg tacgccgggt
     1501 tcgttcagcc ccgcagcggt ctggcgctga aacacggcgt gacctgtctg aacacgccgg
     1561 gcctcatcga ctcgggctac cggggggagc tgaaggtcct gctcgtcaac accgatccca
     1621 ccgatccctt tgaagtggtt cgcggcgaac gcatcgccca actggtgatc cagcgggtcg
     1681 aggaatgccg attcgccgag gtcgacgagc tccctccatc tgaacggggc gagggcggct
     1741 tcgggtcgac cggccgctga ctccaacggt ccggtacgtg ggcatgatcg aggagctgcc
     1801 tggccttgac ggggtcgacg agggcacccg gggaacagtg gtcaaccacc ggatgcgcga
     1861 ggtcaccgaa ctggtggccg gagccggtgt tgaagcgggc acatgggacg gctcgctggt
     1921 cggtgaggtc cggacgttgt ttgactcact ggccccggac tggacggcga cccgtgacca
     1981 tccgagtcgc aacgcgccgt tactggatgc cctggaccgg ggagcggtgg ccgggcggac
     2041 ggtgctcgag ctgggtgccg ggacgtgcat atcggcacgt gacctgcggg atcggttcga
     2101 ttgctacgtg gcggctgacc tttcgtgggg gatgctcagc cacgcggtgg acggagcgcc
     2161 accgctgatg tgcgccgatg gttcagctct gcctttggcc gacagcatcg tcgacgtcct
     2221 gatcctgcag aacatgttcc tgttcgccgc tgaggtcgac cggtgcctag ctgacgacgg
     2281 tttcgtggtc tgggtgaata gccggggacc ggagacgccg atccacctgt catgtgaggc
     2341 agtggtggcg tcgctcgaat cggccaccgg atcgtcgtgg cgggccgtca cctcgaccgt
     2401 aggtgaagcc acgtgggctg tggtgcgtcg agaatctagg aacgcggcgc gctgattcga
     2461 agggtgcggc cgtcgccagt gagatcgatg gctacctcgg aggctgacac ccggtagtcg
     2521 atcactacgt cggagcccgc gccggtcatc tcggcggcca tttcctggag cgacgaggcc
     2581 aggtcgccga tctcggacgg ttcgatccgg tggatccgca acagggaggc caagccaacc
     2641 cgcggcagat caccgaccgg tcgagacgcg ggaaggcgaa gggtcactgc ctcgagatcg
     2701 tcccgctgag aactgcgcgc catggggcga gtctcccatc tcattggcgc gggcgcggtg
     2761 tcggtctgat cgacggcgaa ggtggcggcg agggctgcag gtcgggcaac atcgtcggta
     2821 tgaccgtgct ggtcgatgag gccgtgtggc cctggcgggg cgcccgatgg gcgcacctgg
     2881 tgagcgacga gagcgtcgcc gagctacacg cgttcgcccg tcgtctgggc ctgcggcgta
     2941 tggctttcca aggagaccac tacgacatcc ccacagacgt gcgtgagcgg gcccttgcct
     3001 tgggcgccga ggcggtccgt gggcgggacc tggttcggcg cttgcgggct gccgggctcc
     3061 gtcttgcggc tccagatcga ccgggttcgt gggaggaggt tggccggtgg tcggctccgg
     3121 ggagccgacc tgacctcggt tcgatggatc tggtagtgcc gggtgatcta gccgaggcat
     3181 ttcaaggggt agacgcgcgt tggacgtctg tcgacgtg
//
LOCUS       DASCMR010000449         3118 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002182071, whole genome shotgun sequence.
ACCESSION   DASCMR010000449 DASCMR010000000
VERSION     DASCMR010000449.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 3118)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3118)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3118
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002182071"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            complement(<1..1314)
                     /locus_tag="QGG16_10115"
     CDS             complement(<1..1314)
                     /locus_tag="QGG16_10115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25670.1"
                     /translation="MGESSGGAEMRPAEVSAIALEEVCGALPGGGERRPGQEAMARRV
                     AETIESGSHLVIRAGTGTGKSLAYLVPAIISGRTTVVATATKALQDQLATKDLPFLQE
                     HLVPHLGRSFSFSVLKGRSNYLCRQRLNELATTTAGDQQQLDGLAETADVEDLATIAA
                     WAQETSTGDRSDLPMEPSPATWSAVSVGSTECPGAARCPSGDDCFAEDARAAAAFSDV
                     VVTNLHLYGIDVASEGAILPEHDVAILDEAHQTEDILARAVGFELRSGRFQGLVQRAR
                     AILTRSTAVADVSNMASQLDAALGGHLGTRLVPAASAEVAAALRLAETRLGALRTELL
                     GLPKDGPGDVGPRRERALRSLETLTDDVRAALDLEGGPIPGLKVAWTEGTVGRPSLQV
                     APIDVATVLHERLWQERTVILTSATVPANLPIRLGLDRHDHRYEDV"
     gene            1373..2104
                     /gene="uppS"
                     /locus_tag="QGG16_10120"
     CDS             1373..2104
                     /gene="uppS"
                     /locus_tag="QGG16_10120"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015798683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl diphosphate synthase"
                     /protein_id="HJP25671.1"
                     /translation="MLPSDLDRSRIPNHIACVMDGNGRWAEQRGLPRTDGHTAGEQAL
                     FEVLDGADELGVGWFTVFAFSTENWRRPVEEVEFLLRFNEEIMLGRQEELHERNIRIR
                     FIGRRDRRVPRRLVKRMEEAAALTRDNTGLTFTIAFNYGGRAELVDAVQRIVDAGTKR
                     VSEKTIARNLYDPEMPDPDLVIRTSGEYRVSNFLLWELAYSELVFSNALWPDFRREHL
                     YAAIKEFQDRHRRYGGIADPDESIG"
     gene            2101..2820
                     /gene="recO"
                     /locus_tag="QGG16_10125"
     CDS             2101..2820
                     /gene="recO"
                     /locus_tag="QGG16_10125"
                     /inference="COORDINATES: protein motif:HMM:TIGR00613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HJP25672.1"
                     /translation="MSLYRDDGVVLRTWRLGEADRIIVLLTAEHGKVRAVAKGVRKTR
                     SKFGGRLEPTSHVAVQLHRGRGDLDIVTQAETIDRFEGLRLDAERFADASSLLEVIDV
                     VAPDREADRDRYRMLVGALRTLDERPAALVVPAFLLKLLAHEGLAPELDRCVRCGVDD
                     PLVAVDIGEGGVLCPDCRRGRAVSSSAIAVMRAVLGGGLSGALAVTDPAVCAEVDGVA
                     TSAVEYHLERRLRSRRVLDGS"
     gene            complement(2817..>3118)
                     /locus_tag="QGG16_10130"
     CDS             complement(2817..>3118)
                     /locus_tag="QGG16_10130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25673.1"
                     /translation="TGLRVVRRIDGGLPGFRGAAGRTLPWIIPVPFIPVIEAGMMLAS
                     RGHRRLGDRLAGTVVVDRGWIGEPIVIPSLETTQQVLSDDATPSGADGSSGPFVD"
BASE COUNT          505 a         1005 c         1081 g          527 t
ORIGIN      
        1 cacgtcctcg tagcggtggt cgtgcctgtc cagtccaagc cggatcggaa ggttggccgg
       61 gacggtagca ctggtgagga tcaccgtccg ttcctgccag agacgttcgt gcaggacggt
      121 ggccacgtcg atcggtgcca cctggaggct gggacgtccg actgtgcctt ccgtccaggc
      181 aaccttcagt cccggaatgg gtccaccctc taggtccagg gccgctcgga cgtcgtcggt
      241 caacgtctcc agggagcgaa gtgcccgttc ccgacgggga ccaacatcgc ccggcccgtc
      301 cttgggtagc ccgagtagtt cggtacggag cgcaccgaga cgggtctcgg ccaggcggag
      361 ggccgcagcg acctcagctg acgccgcggg aacaagtcga gtgccgagat gtccaccgag
      421 agcggcgtca agttggctgg ccatgttgga cacgtcggcc accgcggtcg atcgggtgag
      481 aatggccctg gcccgttgga cgagtccttg gaagcgaccc gatcggagtt cgaagccgac
      541 ggcccgcgcc aggatgtcct cggtctggtg ggcctcgtcg aggatggcca cgtcgtgctc
      601 ggggaggatc gccccctcgc tggccacatc gatcccgtag aggtggaggt tggtcaccac
      661 cacatcggag aaggcggcag cggctcgggc gtcctcggcg aagcagtcat caccgctggg
      721 acatcgtgcc gccccgggac actcggttga tccgacactg accgccgacc aggtcgcagg
      781 tgacggctcc atcggcaggt cggaccggtc gccggtggaa gtctcctgag cccaggcagc
      841 gatagtggct aggtcctcga cgtcggccgt ctcggccaac ccgtcgagtt gctgctggtc
      901 accagcggtg gtcgtcgcca gttcgttcag ccgctgcctg cacaagtagt tcgagcgtcc
      961 cttgaggacc gagaacgaaa acgaacgacc aagatgcggc accaggtgct cctgaaggaa
     1021 gggcaggtcc ttggtggcca gctgatcctg gagagccttg gtggctgttg ccaccaccgt
     1081 ggtgcggcca gagatgatgg ccggaacgag gtaggccagc gacttacctg ttccggttcc
     1141 tgcccggatc accaggtgtg agcccgactc gatggtctcg gcgactcggc gcgccatggc
     1201 ctcctggccg ggccgacgct caccgccacc ggggagggcc ccgcagacct cttcgagggc
     1261 aatggccgac acttcagccg gcctcatttc cgctccgccg ctcgactcgc ccatcgtcgc
     1321 cgaggctagg cccggccact cagcgtggag gggcgcgggt agtttcgtcg gtgtgctccc
     1381 ctcggacctg gatcgctcgc ggatcccgaa ccacattgcg tgcgtcatgg atggcaacgg
     1441 ccggtgggcc gagcagcggg gccttccccg caccgatggc catacggctg gcgagcaggc
     1501 cctcttcgag gtcctagatg gtgctgacga actcggggtg ggttggttca ccgtgttcgc
     1561 cttctcgacg gagaactggc ggcgcccggt cgaagaggtg gagtttctgc tgcggttcaa
     1621 cgaggagatc atgctcggcc gccaggagga actccatgaa cggaacatcc gcatccggtt
     1681 catcggtcgg agggaccgac gggtaccccg acgcctcgtc aaaaggatgg aggaggccgc
     1741 cgccctcacc cgggacaaca ccggcctgac cttcaccatt gccttcaact acggcggtcg
     1801 ggccgagttg gtcgacgccg tgcagcggat cgtcgacgcc ggcacgaaac gagtctccga
     1861 gaagaccatc gcacgcaacc tctacgaccc cgagatgccc gacccggacc tcgtcatcag
     1921 aacgtcgggg gagtaccgcg tgtcgaactt cctcctctgg gagctggcct acagcgagct
     1981 cgtgttcagc aatgcgctgt ggcctgattt ccggcgagag catctctatg cggcaatcaa
     2041 ggagttccag gaccggcatc gccgttacgg cggcatcgcc gatccggacg agtcaatcgg
     2101 gtgagcctgt accgggacga cggtgtggtg ctgcggacgt ggcgcctcgg cgaggccgac
     2161 cgcatcatcg tcctactgac cgccgagcac ggaaaggtcc gtgcggtggc caagggagtc
     2221 cgaaagaccc gatcgaagtt cggtgggcgt ctggagccga ccagccacgt ggccgtccag
     2281 cttcaccggg gtcggggcga tctcgacatt gtcacccagg ccgagacgat cgaccgtttc
     2341 gaggggcttc gcctcgatgc cgagaggttt gccgacgcgt cgtcgctgct agaggtcatc
     2401 gacgtggtgg cgcccgaccg tgaggccgac cgagaccgtt accggatgct ggtcggcgcc
     2461 ctgcggaccc tcgacgaacg accggcggcc ctggtggtgc cggccttcct actgaagttg
     2521 ctggcccacg aaggtctggc tccagagttg gacaggtgtg tccgttgtgg agtcgacgac
     2581 ccgctggtgg cagtggacat cggtgaaggt ggagtgctct gccccgactg ccggcgtggc
     2641 cgtgccgtgt cgtcctcggc catcgcggtc atgcgggcgg tgctgggtgg tgggctgtcc
     2701 ggcgcactgg ctgtcaccga tccggcagtg tgcgccgagg ttgacggggt ggccacatca
     2761 gctgtggagt accacctgga gcgccggctg cggtcccgtc gggtcctgga cgggagttag
     2821 tccacgaagg gtccgctgct cccgtctgcc ccggaagggg tggcatcatc ggacagcacc
     2881 tgctgggtcg tctcgagact cggaatgacg atgggttcac cgatccagcc ccggtcgacg
     2941 accaccgttc cggccagtcg gtccccgagg cgccgatgac ctcggctggc cagcatcatc
     3001 ccggcctcga tgaccgggat gaacggcacg gggatgatcc acggaagggt tcggcccgcg
     3061 gcgccccgga aacccggtag gccaccgtcg atccggcgaa ccacccggag tccggtca
//
LOCUS       DASCMR010000450         2390 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002193762, whole genome shotgun sequence.
ACCESSION   DASCMR010000450 DASCMR010000000
VERSION     DASCMR010000450.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 2390)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2390)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2390
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002193762"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..193
                     /locus_tag="QGG16_10135"
     CDS             <1..193
                     /locus_tag="QGG16_10135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25674.1"
                     /translation="VGAANGAGAPAVAIVDVGATGLTSASSESTLSLNAYNSAESLPP
                     EQADATRTSTMAAASVLIS"
     gene            complement(275..892)
                     /locus_tag="QGG16_10140"
     CDS             complement(275..892)
                     /locus_tag="QGG16_10140"
                     /inference="COORDINATES: protein motif:HMM:NF018076.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HJP25675.1"
                     /translation="MPDSLPDWARTQREWLRPTVVGRLGIHPPWCDPVGEVPVSIDPG
                     PTFGHGAHPTTALVLAEVDRLAGPNMSMLDVGCGSGVLAIAAARLGAGPVVGIDVEAD
                     AVAWTRTNAVANAVDVSASTTPITDVPGTFDLVLANVLPVVHDAIASAVAARRAEQGV
                     LVVSGIPDERADRVVGCYVAFGLIEDRRTSLDGWTAAVLAGPVVG"
     gene            complement(885..1793)
                     /locus_tag="QGG16_10145"
     CDS             complement(885..1793)
                     /locus_tag="QGG16_10145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015440263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HJP25676.1"
                     /translation="MSESTFPDDVAAIDTMMGTRAGPNARLNYENLSGIKDDASKEMN
                     FPAQYMFKDVPFSDQARGTDGELQDPPQGADLCLPFMDRNNVQMAMIGIGPGKSEGRA
                     MIEEHPDRFFACHEPDPNEVMGSIRTIRQLHRDAGLKAVTAFPSGRNPQVPIDDPKMY
                     AIYATCCELDIPVFCCAGVPGPRLPFAPQHVELIDQVMYDFPDLVFVTRHGCEPWGDL
                     IVKLMLKWPNLHYSTSAFAPKHYPKAIVDYANTRGADKVIYAGYFPMGLSLDRIFTEL
                     RNVPFKAEVWPKFLRENAIRVLKLDA"
     gene            1902..>2390
                     /locus_tag="QGG16_10150"
     CDS             1902..>2390
                     /locus_tag="QGG16_10150"
                     /inference="COORDINATES: protein motif:HMM:NF012334.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HJP25677.1"
                     /translation="MTHSGAPAPTRLSRLSRSVDGHRVLVTGAGSGIGRATAHLFADE
                     GAIVAVTDLDGSRATTVADEITSVGGRARAWALDVSDEAAVRQVVAEAVDHGGGLDVL
                     VNNAGIPAGAPIEDVDYGDVWQGALDVMLTGMTLTIRAALGHLRASSAGRIVNVSSTE
                     GVG"
BASE COUNT          392 a          782 c          823 g          393 t
ORIGIN      
        1 tgttggcgct gccaacggcg caggtgcgcc tgccgtcgcg atcgtcgatg tcggcgccac
       61 agggctcacc tccgcttcaa gcgaatcaac cctttctctc aacgcataca actctgcaga
      121 gtcgctgccc cctgaacaag ccgatgcgac cagaaccagc accatggccg ctgccagtgt
      181 tctcatctct tgagtttgcc accccacccc gcagggggga ggtggggcgt ctctctggtg
      241 atttgtaagc cgcgggcagc gtcggccccc agggctagcc gacgacggga cccgccagca
      301 ctgccgccgt ccagccgtcg aggctggtac ggcggtcctc gatcagaccg aacgccacat
      361 agcagccgac cacccggtcg gcgcgctcat cggggatgcc gctgaccacc aggacgccct
      421 gttcagcccg ccgggcggcc accgccgacg ctatggcgtc gtgcaccacc ggcagcacgt
      481 tggccagcac caggtcgaag gtgccgggca catcggtgat gggcgtggtg gacgccgaga
      541 cgtctacggc gttggccacc gcgttggtac gggtccaggc aacggcatcg gcctccacgt
      601 cgatgccgac caccggtccg gcacctaggc gggccgcagc gattgccagc acacccgagc
      661 cgcagcccac gtccagcatg ctcatgttcg gcccggctag tcggtccacc tcggccagca
      721 cgagggcggt agtggggtgg gctccgtgtc cgaaggtcgg ccccggatcg atcgagactg
      781 ggacctcgcc gaccggatcg caccacggcg gatgaatgcc cagtcgcccc accacggtgg
      841 gtcgtagcca ctcccgctgg gtccgggccc agtcgggaag cgagtcaggc atccagcttg
      901 agcacccgga tggcgttctc gcggaggaac ttcggccaca cctcggcctt gaacggcacg
      961 ttgcgcagtt cggtgaagat gcggtccaat gacaggccca tggggaagta gccggcgtag
     1021 atgaccttgt cggcgccccg ggtgttcgcg tagtcgacaa tggccttcgg gtagtgcttc
     1081 ggggcgaatg ccgaggtgga gtagtggagg ttcggccact tcagcatcaa cttgacgatc
     1141 aggtcccccc acggttcgca gccgtgccgg gtgacaaaca ccaggtcggg gaagtcgtac
     1201 atcacctggt cgatcaactc gacgtgctgg ggggcgaacg gcaggcgggg tccggggacc
     1261 ccggcgcagc agaagacggg gatgtccagc tcgcagcacg tggcgtagat ggcgtacatc
     1321 ttcgggtcgt cgatggggac ctgggggttg cggccgctcg ggaaggcggt gaccgccttc
     1381 agcccggcgt cgcggtggag ctggcggatg gtccggatcg accccatgac ctcattggga
     1441 tccggctcgt gacaggcgaa gaaccggtcc ggatgctctt cgatcatggc ccgaccctcg
     1501 gacttgccgg gaccgatgcc gatcatggcc atctgcacgt tgttgcggtc catgaacggc
     1561 aggcacagat cggcaccctg cggtgggtcc tggagttcgc cgtcggtacc gcgggcctga
     1621 tcggagaacg gcacgtcctt gaacatgtac tgggccggga agttcatctc cttggaggcg
     1681 tcgtccttga tcccggacag gttctcgtag ttgagcctgg cgttagggcc cgcccgggtg
     1741 cccatcatcg tgtcgatggc tgccacgtcg tcagggaagg tcgattcgct cattcccaca
     1801 tcattggacc tgacagacca tcagggcaac gtggggtcgc cgatcggaac gcctatggga
     1861 ccgggtcgcc ggagggtacg cccccacgcg agactccagc catgacccat tccggagccc
     1921 ccgcaccaac ccgactctcg cgtctgagca ggtcggtgga cggtcaccgg gtgctggtca
     1981 ccggtgccgg gtcggggatc ggacgagcca ccgcccacct gttcgccgac gaaggggcca
     2041 tcgtcgctgt caccgacctc gacgggagcc gagcgaccac agtggccgac gagatcactt
     2101 cggtcggggg tcgggcccgg gcgtgggcct tggacgtctc cgacgaggcg gcagtccggc
     2161 aggtggtggc cgaggccgtt gatcacggtg gaggcctgga cgtgctggtc aacaacgccg
     2221 gcatcccggc cggcgctccg atcgaggatg tcgactacgg cgacgtctgg cagggagcgt
     2281 tggacgtgat gctcaccggc atgaccctga ccattcgggc ggctctgggc cacctgcggg
     2341 catcatccgc cggacggatc gtgaacgtct catccaccga aggggtgggt
//
LOCUS       DASCMR010000451         6287 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000002194103, whole genome shotgun sequence.
ACCESSION   DASCMR010000451 DASCMR010000000
VERSION     DASCMR010000451.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 6287)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6287)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6287
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000002194103"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..1081
                     /locus_tag="QGG16_10155"
     CDS             <1..1081
                     /locus_tag="QGG16_10155"
                     /inference="COORDINATES: protein motif:HMM:NF012296.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HJP25678.1"
                     /translation="AVHRDHRTFSSQVGGTELEELERDPEAREARRTMLETDPPEHTR
                     IRKLVSRSFTRRAIEKWESTARTLIAETIDEALAEGKVDFVDAVARRLPIQMISKLLG
                     VPDRDAEELFHWADSVVYHADPDFSDVLYDKDDTDPYRLLPFRSPNSLKVFEYAQQLA
                     AEKTRRPESDVVSMLAGSDALTPGEFQTFFLLLVIAGNETTRHSLSHGALALAEFPDQ
                     LHRLRENPNLIDTASEEILRWACPQIHFRRTATCDTTLTGVPISAGDKVVTWYISANY
                     DESAFTDPFTLDLGRDPNPHVTFGGGGPHICLGAWLARLEVRVFLDEVAKRIDRIHLV
                     GDPERIRSNFINGLKYLPLELEESR"
     gene            complement(1088..2488)
                     /locus_tag="QGG16_10160"
     CDS             complement(1088..2488)
                     /locus_tag="QGG16_10160"
                     /EC_number="1.14.13.127"
                     /inference="COORDINATES: protein motif:HMM:NF004829.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid
                     hydroxylase"
                     /protein_id="HJP25679.1"
                     /translation="MPQVAIIGCGPVGALLANLLGQAGVETAVHEAAMDEYPLPRACH
                     LDAEIMRIFQGAGLSDQVEQLVEPSRGMEFVDSAGERLFTYEDFERSPILGWFEDYVF
                     QQPQLDRVLREGLERFPEVELFLGSEVTDLDSVDAQFVVACDGASSNTRRNLGIGLAD
                     WGFDQYWLVVDLMLDGDVGLPSVIQQVCDAGRPATYVPSAHGHHRWEFQLMDGESHEE
                     FEDHRRVRELLRPWLPGDGGEIVRAAAYRFHAVVAESWRDGRVFLAGDAAHQMPPFIG
                     QGMCSGIRDAANLAWKLKSVLQHAAPEEILESYEMERRSHVERCIAMSIEAGRIVSGQ
                     ITAFPAPDVNDTERWSRLPPLTEGVFSSGPDDRIGHQARQPRVLANGSPALLDDVGGS
                     DWYLLSRVPHQAGNWCETVLVDDLVDLDGDLDLLLAGQAAVLIRPDRYVFGTADEDSI
                     GELVAAAERLVFGGGS"
     gene            complement(2861..3709)
                     /locus_tag="QGG16_10165"
     CDS             complement(2861..3709)
                     /locus_tag="QGG16_10165"
                     /inference="COORDINATES: protein motif:HMM:NF013706.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HJP25680.1"
                     /translation="MQIANVEGRGSLIIDGRIVDVESATAGEISSDPMELVDLRNHPL
                     LAQVQPDGEAQEIDESDLGPPVPRPGKIIAIAINYRSHAEEANKAIPTEPHVMVKFST
                     CITGPHDDVFMHDLEMVDYEVELVLAIGRSGIRIPRSAAWDHIAGLTVGNDVSDRNEQ
                     FRPPIRQFSMAKSYDRFGPIGPVLVTPDDLPNRDDLEISLTVDGELRQQARTGDFIFS
                     VPVLIEWLSRYVTLEVGDLIFTGTTGGVGDSMDPPTYLQDGQVVEAAIEGIGTIRNRF
                     VAGDPS"
     gene            complement(3742..4626)
                     /locus_tag="QGG16_10170"
     CDS             complement(3742..4626)
                     /locus_tag="QGG16_10170"
                     /inference="COORDINATES: protein motif:HMM:NF014899.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25681.1"
                     /translation="MGEIVGAAVVSHVPPIVMPEALRRELNDGNDFSLVEGLHRLRTE
                     CLDRVKPDTVVVFDTHWFTTVEHVVTSHERRAGKFTSDELPRGMSQVPYDMPGDPDLA
                     LLVDSLASARDDTRVLASDDPYLPVHYPTINLLGFLQGDERWMSVGVCQTATPEDFLL
                     FGNLLAQAIDMSDRRVVLLASGGLSHRFWPLMEFADHESASLDNIRTPEAREADEKVL
                     RWWEQGDHRQVIEYQPEYRRHAPEGFFGHYLMMVGAIGGSACSAAGFRYSEYESAAGT
                     GQVHMWFEKPVSGWTAQK"
     gene            complement(4700..6082)
                     /locus_tag="QGG16_10175"
     CDS             complement(4700..6082)
                     /locus_tag="QGG16_10175"
                     /inference="COORDINATES: protein motif:HMM:NF012503.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016830 - carbon-carbon lyase activity
                     [Evidence IEA];
                     GO_function: GO:0016831 - carboxy-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019752 - carboxylic acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-dependent decarboxylase"
                     /protein_id="HJP25682.1"
                     /translation="MTGARLWPHDEQLLRSVMDWSWRRITGGQNPQARARPSTELDAA
                     LGDTLVPDGIGGHEALRLFTQVVVPATRAQDNPMNLAFVPAAPTEAALVFDLAVSAAE
                     MFAGTWEAGAGAIAAENQALAWLASLAGWPASAGGCFVSGATMGNLSALVASRERART
                     RLAGAAPPRWRFAATGDAHSSVRAAATVMDCEVLAVPGDERGRMTGTALAEVLATLGP
                     DPVAEGLFAVVVSSGTTNAGVVDDIAGVAEVCRANGLWLHVDGAYGAAAMVAPSVAPL
                     FAGMEHADSFVVDPHKWLFAPYDCCALVYREPEHGAAAHSQFANYLEGVDRTVWNPAD
                     FAVHLTRRARGLPFWFSLATYGTDRYRDAVETVLATTRAVADEIRSRPHLRLVMEPDL
                     SVVLFERVGWESADYEAWSDYHARAGNVLCVPTRWEDRSMLRFCFINPTTDVDEVASV
                     LDGLADAPPG"
     gene            complement(6079..>6287)
                     /locus_tag="QGG16_10180"
     CDS             complement(6079..>6287)
                     /locus_tag="QGG16_10180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25683.1"
                     /translation="AERRAVPEDRRRVEVILTPAGNKVVEEVMPAFNREEALVTGDLT
                     DDEMATLARLLRKILQTTAALDKR"
BASE COUNT         1293 a         2023 c         1802 g         1169 t
ORIGIN      
        1 ggcggttcac cgcgaccacc gaaccttttc ctcccaagtc gggggcaccg aacttgaaga
       61 actcgagagg gatccagagg cccgcgaggc acgacggaca atgctggaaa ccgaccctcc
      121 cgagcacacg agaatcagaa agctggtctc tcgcagcttc acccggagag ctatcgaaaa
      181 atgggagagc acagctcgca ccctcatcgc ggagaccatc gacgaggccc ttgccgaagg
      241 caaggtcgac ttcgtcgacg cagtcgctcg acgcctcccg attcagatga tcagcaaact
      301 gctcggtgtg cccgaccggg atgccgaaga actgttccac tgggccgact cagtcgtcta
      361 ccacgctgat cccgacttct cagacgtgtt gtacgacaag gacgacacgg acccctaccg
      421 gctgctcccg tttcgaagtc ccaactcact gaaagtcttc gaatacgccc agcagcttgc
      481 cgccgaaaag acaaggagac ccgaatctga cgtggtctcg atgctcgcgg gctccgacgc
      541 cttgactccc ggggagttcc agaccttttt cctcttgttg gtcatcgcag gaaatgagac
      601 cactcgccac agcctcagcc acggcgccct ggctctggcc gaatttccgg accaactgca
      661 ccggctacga gaaaacccca acctgattga cacggcgtca gaggaaatcc ttcgatgggc
      721 ctgcccccag atccatttca ggagaaccgc tacctgcgac acaaccctga cgggagtacc
      781 tatctccgcc ggggacaagg tcgttacctg gtacatctcg gccaactacg acgagagcgc
      841 cttcactgac ccattcacgc ttgacctggg aagagatccc aatccacacg tgacttttgg
      901 gggtggaggc ccgcatatct gtctcggcgc ctggttggcc aggttggaag tgagggtctt
      961 cctagacgag gtcgcaaagc gcatcgaccg catccacctc gtgggcgatc cagagcgaat
     1021 ccgttcgaac ttcatcaatg gcttgaagta cctaccgctc gaactggagg agtctcgctg
     1081 actgccgtca actacctcca ccgaagacca ggcgttccgc agccgcgaca agttcgccaa
     1141 tggaatcctc gtctgccgtg ccaaagacat agcgatctgg gcggatgagg actgctgcct
     1201 gtccagcgag gaggagatca aggtcgccgt ctagatcaac cagatcgtca acaaggaccg
     1261 tttcacacca gttccctgcc tgatgaggca cccgggacag taaataccag tccgagccgc
     1321 caacatcgtc gagcagcgcc ggtgacccat tggccaggac ccttggttgc cgtgcctgat
     1381 gtccgattct gtcgtcaggc cctgaagaga agaccccctc cgttagcggc ggaagacgcg
     1441 accaccgctc cgtgtcgttc acatcaggag cgggaaacgc tgtgatctgt cctgagacga
     1501 tgcgcccggc ttcgatcgac atggctatgc atctctctac atggctacga cgctccattt
     1561 cgtagctctc caggatttcc tcgggagccg cgtgctggag gaccgacttc aatttccagg
     1621 cgagattggc ggcatcacga attcctgaac acatcccttg gccgatgaac ggcggcatct
     1681 gatgagccgc gtcgccagcc agaaaaacac ggccatcccg ccagctttca gccacgactg
     1741 cgtggaaccg gtaggcggcg gctcgaacga tttccccgcc atccccggga agccatggtc
     1801 ggagtagttc gcgaactctt cgatggtctt cgaactcttc gtggctctca ccgtccatga
     1861 gctgaaactc ccagcggtga tggccatgag cggaaggcac gtaggtcgcc ggcctacccg
     1921 catcacaaac ctgctggatc accgaaggta ggccgacatc gccgtcaagc atcagatcca
     1981 ctacaagcca gtactggtcg aagccccagt ccgccagacc gatacccagg ttgcggcggg
     2041 tgttgctcga ggctccgtcg caggcaacga cgaactgcgc atcgacggaa tccaggtcgg
     2101 ttacctctga accaaggaac aactcgacct cagggaatct ctcgaggcct tcacgaagaa
     2161 cgcgatctag ttgcggctgt tgaaatacgt agtcctcgaa ccacccgagt atcggcgacc
     2221 tctcaaagtc ctcgtaggtg aagagcctct cccctgcgga gtcgacgaac tccatccctc
     2281 ggcttggttc aacgagttgt tctacctggt ccgaaaggcc cgcaccctgg aagatcctca
     2341 tgatctccgc gtccagatga caggcccgag gaagcggata ttcatccata gcggcctcgt
     2401 ggactgctgt ctccactccg gcttgtccta gaaggttcgc cagtagagcg ccgaccggcc
     2461 cacaaccgat tattgcgacc tgcggcacgt ccctagtggg ctaggtccgg tactgcgtca
     2521 tgccaacaag tcgtccccca tgtgactgcg agcagggtgc aatcagatcc gtccatcgcc
     2581 ccatgccagt gggcctcacc tggtggggca acgacgaggt ggccagggtt gatcgtgact
     2641 gctccatcgg cagacgttcc tacacgggct tcaccggata cgacaaaaag cagttgccca
     2701 ccgggatgat ggtgccagtt ggtcaccgct ccagagtgga aatggaccag agctgtgtca
     2761 ggttcctgat cgtctgctgt cgcattgagc atctctagtt cgacatgccc ggtgaacaac
     2821 cccccgtagc tgctgtctcg gtcaccaccg gtcacgacga tcatgaagga tctccggcaa
     2881 caaatcgatt tcggatcgtc ccgatcccct cgatggcggc ctcgactacc tgaccgtctt
     2941 gcaggtaggt ggggggatcc atcgaatcgc cgacgccacc agttgttccc gtaaagatca
     3001 agtcgcccac ttctagcgtg acgtaccggg acagccattc gatcagaacc ggtacagaaa
     3061 agatgaagtc accggttctt gcctgctggc gaagttcgcc atcgacggtc agagatattt
     3121 cgaggtcgtc gcgattcgga agatcgtctg gggtaacaag gaccgggcca atgggtccga
     3181 atcggtcata gctctttgcc atggagaact gccgaattgg aggccggaac tgttcgtttc
     3241 ggtcgctcac atcgttgcct accgtcagcc cagcgatgtg atcccaagcc gctgatctcg
     3301 gaatccggat gccgctacgg ccaatggcta ggacgagttc aacctcataa tcgaccatct
     3361 ctaggtcatg cataaacaca tcgtcgtgcg gacccgtgat gcaagtggaa aatttgacca
     3421 tcacatgcgg ttcggtcgga atggccttgt tcgcctcctc tgcatggctt cggtagttga
     3481 tcgcaatggc aatgatcttt ccgggtcttg gcaccggtgg tcctaggtcg gactcgtcga
     3541 tctcctgagc ctcaccatcc ggttgaacct gggccagcag gggatgattc ctgagatcaa
     3601 cgagttccat cgggtcactc gagatctctc cagcggttgc cgactcgacg tcgactatcc
     3661 gaccgtcgat gatcagcgac cctcgtcctt ccacatttgc tatttgcacg aacttcctac
     3721 ctaatccggt ttgtgagtcg tctacttctg ggcggtccag ccactgacag gcttttcgaa
     3781 ccacatgtgc acctggccag tcccggctgc tgattcgtac tccgaatacc gaaagccggc
     3841 cgcactgcaa gcactcccac cgattgcccc gaccatcatc aggtaatggc caaagaagcc
     3901 ctcgggggca tgccttctgt attccggctg gtactcaatc acttgacggt ggtctccttg
     3961 ctcccaccat cgaagcacct tctcatcggc ttcgcgggct tccggagtcc gaatgttgtc
     4021 gagggaagcc gattcatggt cggcgaactc catcaaaggc cagaagcggt ggctcaatcc
     4081 cccagaggcg agcagaacaa cgcgccggtc ggacatgtcg atcgcctgag ccaagaggtt
     4141 gccaaagagc aggaaatcct ctggcgtcgc cgtttggcag accccaaccg acatccacct
     4201 ttcgtcgccc tgaagaaacc cgagaagatt aatcgtcggg taatgaaccg gcaggtaggg
     4261 atcgtcgcta gccaggactc tggtgtcatc tcgagcggac gctagggaat cgaccaagag
     4321 ggctaggtca ggatcgccgg gcatgtcgta ggggacctgg gacatccccc gaggcaactc
     4381 gtcggatgtg aacttgcctg cccgtcgctc gtgagaggtg accacgtgct ccacggtcgt
     4441 gaaccagtgc gtatcgaata cgacaacggt gtcgggcttc acgcgatcta ggcactctgt
     4501 acgcagccga tgaagcccct ccacgagtga gaagtcgttg ccatcattga gttcccgccg
     4561 gagagcttcc ggcatgacta tgggtgggac atgtgagaca acggctgcac cgacgatctc
     4621 acccatggtc gagacctcgg ttggtgatta ttggcgaagg ctgcatgtcg tcaaccctaa
     4681 tcatttggga ccaaatgatt caacctgggg gtgcgtccgc caggccgtct aggacggagg
     4741 ccacctcgtc aacgtctgtg gtcgggttga tgaagcagaa ccggagcatg gaacgatcct
     4801 cccaccgtgt aggcacgcag aggacgtttc ccgcccgggc gtgatagtcc gaccaggcct
     4861 cgtagtcggc cgactcccac cccacccgtt cgaataacac caccgagagg tcgggttcca
     4921 tgacaaggcg gaggtggggc cgggaccgga tctcgtcggc caccgcccgt gtggtggcta
     4981 gcactgtctc caccgcatcc cgatatcggt cagtgccgta ggtggccagc gagaaccaga
     5041 acggtaggcc ccgggctcgc cgggtgaggt gcaccgcgaa gtcggccgga ttccacaccg
     5101 tccggtcgac gccctcgagg taattagcaa attgggagtg ggccgccgcc ccgtgttcgg
     5161 gttcgcggta caccagcgcg caacagtcgt agggagcgaa caaccactta tgaggatcga
     5221 ccacaaacga gtcggcgtgc tccatgccgg cgaacagggg cgccaccgac ggcgccacca
     5281 tcgccgctgc cccgtaggca ccgtccacgt gcaaccacag tccattggcc cggcacacct
     5341 cggccacccc ggcgatgtca tcaaccaccc cggcgttggt ggtccctgac gacaccacca
     5401 ccgcgaacaa gccctcggcc actggatcgg ggccgagagt ggccagcacc tccgcgaggg
     5461 cggtgccggt catgcgcccc cgctcgtctc cgggcacggc cagcacctcg cagtccatga
     5521 cggtcgcggc ggcccggacc gaactatggg cgtcgccggt ggccgcgaac cgccaccgag
     5581 gcggtgctgc cccggcaaga cgcgtccggg cccgctcccg actggccacc aacgcgctca
     5641 ggtttcccat ggtcgccccc gacacgaaac acccgccggc gctggccggc caaccggcca
     5701 gcgaagctag ccaggccaga gcctgattct ccgcggcgat ggcgcccgct ccagcctccc
     5761 acgtgccggc gaacatctcg gccgcgctga cagccaggtc gaataccagg gccgcctcag
     5821 tgggggcggc gggcacgaag gccaggttca tcgggttgtc ctgggctcgg gtagccggga
     5881 ccaccacctg ggtgaacagg cgtaacgcct cgtgaccgcc gatgccatcg ggcaccaaag
     5941 tgtcaccgag tgccgcatcc aactcggtgg acggtcgagc ccgagcctgg ggattttggc
     6001 caccggtgat cctgcgccaa ctccagtcca tgaccgaccg gagcagctgc tcatcatgcg
     6061 gccataaccg cgcaccggtc atcgcttatc gagggctgca gtggtctgaa gaatcttgcg
     6121 tagaagtcgg gccagcgtcg ccatctcgtc gtccgtgaga tcgccggtaa ccaaggcctc
     6181 ctcacgattg aaggcgggca tgacctcttc gaccaccttg ttcccggcgg gagtgagaat
     6241 cacttcaaca cggcgccgat cctcgggtac tgccctccgc tcggcaa
//
LOCUS       DASCMR010000452         1547 bp    DNA     linear   ENV 14-DEC-2023
DEFINITION  MAG TPA_asm: Acidimicrobiales bacterium isolate Fu_MAG_11
            c_000000207211, whole genome shotgun sequence.
ACCESSION   DASCMR010000452 DASCMR010000000
VERSION     DASCMR010000452.1
DBLINK      BioProject: PRJNA955304
            BioSample: SAMN34270929
            Sequence Read Archive: SRR4465024, SRR4465025, SRR4465026,
            SRR4465027, SRR4465028, SRR4465029, SRR4465030, SRR4465031,
            SRR4465032, SRR4465033, SRR4465034, SRR4465035, SRR4465036,
            SRR4465037
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Acidimicrobiales bacterium (marine metagenome)
  ORGANISM  Acidimicrobiales bacterium
            Bacteria; Actinomycetota; Acidimicrobiia; Acidimicrobiales.
REFERENCE   1  (bases 1 to 1547)
  AUTHORS   Zhang,I.H., Sun,X., Jayakumar,A., Fortin,S.G., Ward,B.B. and
            Babbin,A.R.
  TITLE     Partitioning of the denitrification pathway and other nitrite
            metabolisms within global oxygen deficient zones
  JOURNAL   ISME Commun 3 (1), 76 (2023)
   PUBMED   37474642
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1547)
  AUTHORS   Zhang,I.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-OCT-2023) Earth, Atmospheric, and Planetary Sciences,
            Massachusetts Institute of Technology, 77 Massachusetts Avenue,
            Cambridge, MA 02139, USA
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Date          :: NOV-2021
            Assembly Method        :: MEGAHIT v. v1.2.9
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: 1x
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 12/09/2023 00:23:00
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,039
            CDSs (total)                      :: 2,005
            Genes (coding)                    :: 1,998
            CDSs (with protein)               :: 1,998
            Genes (RNA)                       :: 34
            tRNAs                             :: 32
            ncRNAs                            :: 2
            Pseudo Genes (total)              :: 7
            CDSs (without protein)            :: 7
            Pseudo Genes (ambiguous residues) :: 0 of 7
            Pseudo Genes (frameshifted)       :: 0 of 7
            Pseudo Genes (incomplete)         :: 5 of 7
            Pseudo Genes (internal stop)      :: 2 of 7
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1547
                     /organism="Acidimicrobiales bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="c_000000207211"
                     /isolate="Fu_MAG_11"
                     /isolation_source="seawater"
                     /db_xref="taxon:2201156"
                     /environmental_sample
                     /country="Pacific Ocean:Eastern Tropical North Pacific
                     ODZ"
                     /lat_lon="17.04 N 106.54 W"
                     /collection_date="2012-04-08"
                     /metagenome_source="marine metagenome"
                     /note="metagenomic"
     gene            <1..259
                     /locus_tag="QGG16_10185"
     CDS             <1..259
                     /locus_tag="QGG16_10185"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HJP25684.1"
                     /translation="RCAPGSGTLRNLGGVTRATDGPDATAGSGAGLGPATLIFPGSDV
                     DTHSWLVDTTGQVHPDDPELALLAYESGVLHRPASGEQVHC"
     gene            complement(276..1193)
                     /locus_tag="QGG16_10190"
     CDS             complement(276..1193)
                     /locus_tag="QGG16_10190"
                     /inference="COORDINATES: protein motif:HMM:NF012235.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HJP25685.1"
                     /translation="MTSQGKDQSPLIEVEHISKQFPTDHNARVHAVTDVSLHIDHGET
                     LAVVGESGCGKSTLANLIIRLHDADQGRILLKGVDITDLNPREMREHRQTLQIVFQDP
                     FASLDPRVRVGTSVAEPLTVHKVATKEEATDQVRQLFELVGLDQSMLNNYPHQFSGGQ
                     RQRVCIARALALKPELVIADEAVSALDVSVQAQVMNLMLELQQEMGLSYLFISHDLAV
                     VERIAHRVAVMYLGQVVELGSREQVFRDPRHSYTKRLLGAVPIADPRQRTERPLITGE
                     IPSPVWPAGEGPDLVTHTEVEPGHLVAQE"
     gene            complement(1190..>1547)
                     /gene="dppD"
                     /locus_tag="QGG16_10195"
     CDS             complement(1190..>1547)
                     /gene="dppD"
                     /locus_tag="QGG16_10195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="DppD and DppF are the ATP-binding components of the
                     ABC dipeptide transport system DppABCDF; Derived by
                     automated computational analysis using gene prediction
                     method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein
                     DppD"
                     /protein_id="HJP25686.1"
                     /translation="IMIAIGLCCGPRLLIADEPTTALDVTIQAQILGLIKQLQVETGT
                     AMMLITHDMGVIAEVADRVVVMNQAKIVEQGPVEQIFHSPRESYTRGLLSAVPKLGSM
                     AGHDGPRPFNLAGNLA"
BASE COUNT          264 a          447 c          502 g          334 t
ORIGIN      
        1 ccgatgcgcc ccgggcagcg gcacgctccg gaacctcggt ggtgtcacac gtgccacaga
       61 tggtccggat gccacggctg gctcaggggc tggtttgggc ccggcgacgc tgatcttccc
      121 ggggtccgac gtcgataccc atagttggct ggtcgacacc accggtcagg tgcatcccga
      181 tgacccggag ttggctctgc tggcctacga gtcaggagtg ttgcaccgcc cggcatccgg
      241 cgagcaggtg cactgctgac accggttagc gcgagctatt cctgagcaac cagatgcccg
      301 ggctccacct cggtgtgggt gaccaggtcg ggtccttctc ccgcgggcca gaccgggctg
      361 gggatctcgc ccgtgatgag cggtcgttcg gtccgctgcc ggggatcggc gattggcacg
      421 gcacccagga ggcgtttcgt gtaggagtgc ctggggtccc ggaatacctg ttcgcgtgac
      481 ccgagttcga ctacctggcc caggtacatc acggccaccc ggtgggcgat gcgctccacg
      541 acagccaggt cgtggctgat gaacagatag gacaggccca tctcctgttg gagttccagc
      601 atcaggttca tgacctgggc ctgaaccgac acgtcaaggg ctgagacggc ctcatcggca
      661 atgactagtt cgggcttcag tgccagggct cgcgcaatgc acactcgctg gcgttggccg
      721 ccagagaact ggtgggggta gttgttcagc attgattggt caagaccgac cagctcgaac
      781 aactggcgca cctggtctgt cgcctcctcc ttagtggcga ctttgtggac cgtcaggggt
      841 tcggccacag atgttccgac ccggactcgg ggatcgaggc tggcgaaggg atcctgaaag
      901 acgatctgca gggtctgtct gtgttcgcgc atctcccgag ggttgaggtc agttatgtca
      961 actcccttga ggagaattcg gccctggtcc gcgtcgtgga gacggataat gaggttggcc
     1021 agggttgatt ttccgcaacc gctctctccg accacggcga gggtttcacc atgatcgata
     1081 tgaagcgata catcagtcac tgcgtgcacc cgagcgttgt ggtcggtcgg gaactgtttc
     1141 gagatgtgct ccacctcgat aaggggactc tggtccttgc cctggctcgt catgccaggt
     1201 ttcctgccag gttgaacggt ctaggtccgt cgtggccggc catgcttcca agtttgggca
     1261 ccgcgctgag taggcctcgg gtgtacgact ctctcggcga gtggaagatc tgttctacag
     1321 ggccctgttc aacaatcttt gcctggttca tgacgacgac gcggtctgcc acttcagcaa
     1381 tcacacccat gtcgtgggtg atgagcatca tcgctgtgcc cgtctcgacc tgaagttgct
     1441 tgatgagtcc aagaatctga gcctggatgg ttacatcgag ggccgttgtg ggttcgtcgg
     1501 cgatgagtag tcggggtccg caacacaggc cgatggcaat cattatt
//
